Trimin1|352953|estExt_Genemark1.C_Ctg_1370050 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352953
Unique NameTrimin1|352953|estExt_Genemark1.C_Ctg_1370050
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length496
Homology
BLAST of jgi.p|Trimin1|352953 vs. uniprot
Match: A0A835Z9Y9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Y9_9STRA)

HSP 1 Score: 852 bits (2201), Expect = 6.120e-310
Identity = 495/495 (100.00%), Postives = 495/495 (100.00%), Query Frame = 0
Query:    1 MASAYDARAAGYDPTAWARERQERIHKAAQRPRPSWNNDFVDSNALAPEADSSGRRHGTDTVIGRRRDSGGTSSRHAAGASGDGGANLAGGDAEPWRHRHTTTPKLPWDDGPAPPAPAADADARSGSAENGYHRADARRAHTCAANSAQEWGDGAAAGWEGGGAMLGTHSXXXXXXXXXXXXXPELLMLLKQKMNSRKGPRKLSGSLPSRSKXXXXXXXXXXXDMGQPQEYADVQLQQCPDCGRRFNEKAFGKHVSVCRQVFLQKRKAFDAAKMRVAGTEMAEFTAKTPSGRGSAXXXXXXXXXXXXXXXXXTGDDQPVAGNGGAKSAKWRQQSAAFREAIRSARMVTQAQAKGIPLARLPAAAAAAPDPSLVPCPHCARRFNEAAAERHIPRCSSIRAQPSRLAKGSGRGLGVASRKPSGPGRRFVNDLGTAQFTGKQKKEHEAAKIVALGGQAPKAQKMPYKILMGMRNKAKEREAKRLQAEKESGAAARMAS 495
            MASAYDARAAGYDPTAWARERQERIHKAAQRPRPSWNNDFVDSNALAPEADSSGRRHGTDTVIGRRRDSGGTSSRHAAGASGDGGANLAGGDAEPWRHRHTTTPKLPWDDGPAPPAPAADADARSGSAENGYHRADARRAHTCAANSAQEWGDGAAAGWEGGGAMLGTHSXXXXXXXXXXXXXPELLMLLKQKMNSRKGPRKLSGSLPSRSKXXXXXXXXXXXDMGQPQEYADVQLQQCPDCGRRFNEKAFGKHVSVCRQVFLQKRKAFDAAKMRVAGTEMAEFTAKTPSGRGSAXXXXXXXXXXXXXXXXXTGDDQPVAGNGGAKSAKWRQQSAAFREAIRSARMVTQAQAKGIPLARLPAAAAAAPDPSLVPCPHCARRFNEAAAERHIPRCSSIRAQPSRLAKGSGRGLGVASRKPSGPGRRFVNDLGTAQFTGKQKKEHEAAKIVALGGQAPKAQKMPYKILMGMRNKAKEREAKRLQAEKESGAAARMAS
Sbjct:    1 MASAYDARAAGYDPTAWARERQERIHKAAQRPRPSWNNDFVDSNALAPEADSSGRRHGTDTVIGRRRDSGGTSSRHAAGASGDGGANLAGGDAEPWRHRHTTTPKLPWDDGPAPPAPAADADARSGSAENGYHRADARRAHTCAANSAQEWGDGAAAGWEGGGAMLGTHSXXXXXXXXXXXXXPELLMLLKQKMNSRKGPRKLSGSLPSRSKXXXXXXXXXXXDMGQPQEYADVQLQQCPDCGRRFNEKAFGKHVSVCRQVFLQKRKAFDAAKMRVAGTEMAEFTAKTPSGRGSAXXXXXXXXXXXXXXXXXTGDDQPVAGNGGAKSAKWRQQSAAFREAIRSARMVTQAQAKGIPLARLPAAAAAAPDPSLVPCPHCARRFNEAAAERHIPRCSSIRAQPSRLAKGSGRGLGVASRKPSGPGRRFVNDLGTAQFTGKQKKEHEAAKIVALGGQAPKAQKMPYKILMGMRNKAKEREAKRLQAEKESGAAARMAS 495          
BLAST of jgi.p|Trimin1|352953 vs. uniprot
Match: A0A7S4DGN0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGN0_HETAK)

HSP 1 Score: 150 bits (380), Expect = 6.230e-39
Identity = 101/187 (54.01%), Postives = 132/187 (70.59%), Query Frame = 0
Query:  233 DVQLQQCP-DCGRRFNEKAFGKHVSVCRQVFLQKRKAFDAAKMRVAGTEMAEFTAKTPSGRGSAXXXXXXXXXXXXXXXXXTGDDQPVAGNGGAKSAKWRQQSAAFREAIRSARMVTQAQAKGIPLARLPAAAAAAPDPSLVPCPHCARRFNEAAAERHIPRCSSIRAQPSRLAKGSGRGLGVASRK 418
            D  L +C   CGR+FNEKA  KH  VCR+VF++KR+AFD  + R+ G E A+  AKT     + XXXXXXXXXXXXXXXX   +DQPV GNG  K++KW+ QS   REA++  R++ + + +G  LA LP  A +APDPSLVPCP C RRFN+ AA+RHIP+C++IR +P  L +G+  GLG A+RK
Sbjct:   28 DTTLYECGVGCGRKFNEKALAKHEKVCRKVFVEKRRAFDTQQQRITGEEHAKALAKTKQEEAARXXXXXXXXXXXXXXXXANPEDQPV-GNG--KASKWKAQSDQLREAMKQQRLIARYEKEGKSLADLPQMAPSAPDPSLVPCPTCGRRFNQQAADRHIPKCATIRNKPKTLQRGARVGLGAAARK 211          
BLAST of jgi.p|Trimin1|352953 vs. uniprot
Match: D8LNR2_ECTSI (Zinc finger, C2H2 type family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNR2_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 8.280e-38
Identity = 104/197 (52.79%), Postives = 126/197 (63.96%), Query Frame = 0
Query:  234 VQLQQCPDCGRRFNEKAFGKHVSVCRQVFLQKRKAFDAAKMRVAGTEMAEFTAKTPSGRGSAXXXXXXXXXXXXXXXXXTGDDQPVAGNG--GAKSAKWRQQSAAFREAIRSARMVTQAQAKGIPLARLPAAAAAAPDPSLVPCPHCARRFNEAAAERHIPRCSSIRAQPSRLAKGSGRGLGVASRKP----SGPGR 424
            V+L++C  CGRRF   A  KH   C +VF  KRK FD A+MR+ GTE+ +F  +    +G A     XXXXXXXXX     DD PV G    GA+S+KWRQQS  FR+A+R AR+V  AQ  G  LA LP    +APDPSL+PCPHC RRF+E A ERH+  C +IRA+PS L KGSG  LG A+RK     SG GR
Sbjct:  867 VELEECRTCGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGTELEKFAKE----KGRAGGRGGXXXXXXXXXPPRGFDDTPVGGAAARGARSSKWRQQSKQFRDALRQARVVADAQKSGKSLADLPPPKPSAPDPSLIPCPHCGRRFSELAGERHMQHCKNIRAKPSVLKKGSGSLLGQAARKTASGASGKGR 1059          
BLAST of jgi.p|Trimin1|352953 vs. uniprot
Match: A0A812UVN6_SYMMI (ZC2HC1A protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UVN6_SYMMI)

HSP 1 Score: 128 bits (322), Expect = 7.830e-31
Identity = 103/202 (50.99%), Postives = 125/202 (61.88%), Query Frame = 0
Query:  238 QCPDCGRRFNEKAFGKHVSVCRQVFLQKRKAFDAAKMRVAGT-------EMAEFTAKTPSGRGSAXXXXXXXXXXXXXXXXXTGDDQPVAGNGGAKSAKWRQQSAAFREAIRSARMVTQAQAKGIPLARLPAAAAAAPDPSLVPCPHCARRFNEAAAERHIPRCSSIRAQPSRLAKGSG-----RGLGV---ASRKPSGPGR 424
            +CPDCGR+FN   + KHV +C +VFLQK KAFD+ KMR+A         + A  + K        XXXXXXXXXXXXXXXXX          GG    KW++QS  FREA+R ARMV +A+  G P+   P  A +APDPSLVPCP+C R FNE AAERHIP+C +IRAQP  L +GSG      G G    A ++ SG GR
Sbjct:   20 ECPDCGRKFNPIPYEKHVKICAKVFLQKSKAFDSKKMRIADNPELLKIQQAALRSEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGG----KWKEQSNQFREAMRMARMVAKAEKTGGPM---PEMAPSAPDPSLVPCPNCGRTFNERAAERHIPQCKNIRAQPKSLKRGSGGAGGRAGTGAVNKAKQQTSGAGR 214          
BLAST of jgi.p|Trimin1|352953 vs. uniprot
Match: A0A7S3D924_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D924_9EUKA)

HSP 1 Score: 120 bits (300), Expect = 3.080e-26
Identity = 79/187 (42.25%), Postives = 109/187 (58.29%), Query Frame = 0
Query:  232 ADVQLQQCPDCGRRFNEKAFGKHVSVCRQVFLQKRKAFDAAKMRVAGTEMAEFTAKTPSGR-GSAXXXXXXXXXXXXXXXXXTGDDQPVAGNGGAKSAKWRQQSAAFREAIRSARMVTQAQAKGIPLARLPAAAAAAPDPSLVPCPHCARRFNEAAAERHIPRCSSIRAQPSRLAKGSGRGLGVASR 417
            A+  +  C  CGR+F E    KH++ C +   +KRKAFD +KMR  GT++ ++  + P G  G  XXXXXX            GDD+ +      K AKW++Q  AF   I++AR  TQA  +G P + +P   +   D  LV CPHC R+FNEAAAERHIPRC  I+A+P+ L +G+G+G G   R
Sbjct:  201 AEGPMVPCHICGRKFFESRIDKHITACEKS-QKKRKAFDTSKMRADGTDIGQYKRENPGGGLGGXXXXXXXKKPGAAKGGKGGGDDRQLD-----KKAKWKRQHEAFMANIKAARAATQAIKEGKPASEIPVVPSMQDD--LVQCPHCNRKFNEAAAERHIPRCRDIKAKPTMLRRGTGKGAGQLKR 379          
BLAST of jgi.p|Trimin1|352953 vs. uniprot
Match: A0A5A8D635_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D635_CAFRO)

HSP 1 Score: 122 bits (307), Expect = 4.210e-26
Identity = 82/180 (45.56%), Postives = 107/180 (59.44%), Query Frame = 0
Query:  238 QCPDCGRRFNEKAFGKHVSVCRQVFLQKRKAFDAAKMRVAGTEMAEFTAKTPSGRGSAXXXXXXXXXXXXXXXXXTGDDQPVAGNGGAKSAK------WRQQSAAFREAIRSARMVTQAQAKGIPLARLPAAAAAAPDPSLVPCPHCARRFNEAAAERHIPRCSSIRAQPSRLAKGSGRG 411
            +C  CGR+F   A  KH  VC +VF +KR+ FD+   R+    +A        G    XXXXXXXX          G     +  GGA +A       WRQ+S+  REA++++RM+T+AQ +G  L  LP   AAAPDPSLVPCPHC R FN  AAERHIP+C++ +A+PSRLA+G G G
Sbjct:  475 ECSTCGRKFRPDALEKHARVCLKVFQKKRRKFDSTSARMPPEALA---VGADGGXXXXXXXXXXXXGAPARGPRSRGGPPAGSAAGGADAAARAKREAWRQKSSQLREAMKASRMITKAQKEGKDLRDLPPMPAAAPDPSLVPCPHCGRTFNAVAAERHIPKCATTKAKPSRLARGGGVG 651          
BLAST of jgi.p|Trimin1|352953 vs. uniprot
Match: A0A5A8DGU2_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DGU2_CAFRO)

HSP 1 Score: 121 bits (303), Expect = 1.640e-25
Identity = 75/185 (40.54%), Postives = 100/185 (54.05%), Query Frame = 0
Query:  227 QPQEYADVQLQQCPDCGRRFNEKAFGKHVSVCRQVFLQKRKAFDAAKMRVAGTEMAEFTAKTPSGRGSAXXXXXXXXXXXXXXXXXTGDDQPVAGNGGAKSAKWRQQSAAFREAIRSARMVTQAQAKGIPLARLPAAAAAAPDPSLVPCPHCARRFNEAAAERHIPRCSSIRAQPSRLAKGSGRG 411
            +P E  D    +C  CGR+F   A  KH  VC +VF +KR+ FD+ +               P+G  +                   G D        AK   WRQ+S+  REA++++RM+T+AQ +G  L  LP   AAAPDPSLVPCPHC R FN  AAERHIP+C++ +A+PSRLA+G G G
Sbjct:  575 EPDEEDDGVRVECSTCGRKFRPDALEKHARVCLKVFQKKRRKFDSTR------------GGPPAGSAAG------------------GADAAAR----AKREAWRQKSSQLREAMKASRMITKAQKEGKDLRDLPPMPAAAPDPSLVPCPHCGRTFNAVAAERHIPKCATTKAKPSRLARGGGVG 725          
BLAST of jgi.p|Trimin1|352953 vs. uniprot
Match: A0A7S3G5B9_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G5B9_9EUKA)

HSP 1 Score: 120 bits (300), Expect = 2.170e-25
Identity = 79/187 (42.25%), Postives = 109/187 (58.29%), Query Frame = 0
Query:  232 ADVQLQQCPDCGRRFNEKAFGKHVSVCRQVFLQKRKAFDAAKMRVAGTEMAEFTAKTPSGR-GSAXXXXXXXXXXXXXXXXXTGDDQPVAGNGGAKSAKWRQQSAAFREAIRSARMVTQAQAKGIPLARLPAAAAAAPDPSLVPCPHCARRFNEAAAERHIPRCSSIRAQPSRLAKGSGRGLGVASR 417
            A+  +  C  CGR+F E    KH++ C +   +KRKAFD +KMR  GT++ ++  + P G  G  XXXXXX            GDD+ +      K AKW++Q  AF   I++AR  TQA  +G P + +P   +   D  LV CPHC R+FNEAAAERHIPRC  I+A+P+ L +G+G+G G   R
Sbjct:  383 AEGPMVPCHICGRKFFESRIDKHITACEKS-QKKRKAFDTSKMRADGTDIGQYKRENPGGGLGGXXXXXXXKKPGAAKGGKGGGDDRQLD-----KKAKWKRQHEAFMANIKAARAATQAIKEGKPASEIPVVPSMQDD--LVQCPHCNRKFNEAAAERHIPRCRDIKAKPTMLRRGTGKGAGQLKR 561          
BLAST of jgi.p|Trimin1|352953 vs. uniprot
Match: A0A699Z5H0_HAELA (Uncharacterized protein n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699Z5H0_HAELA)

HSP 1 Score: 111 bits (277), Expect = 4.260e-25
Identity = 66/166 (39.76%), Postives = 90/166 (54.22%), Query Frame = 0
Query:  236 LQQCPDCGRRFNEKAFGKHVSVCRQVFLQKRKAFDAAKMRVAGTEMAEFTAKTPSGRGSAXXXXXXXXXXXXXXXXXTGDDQPVAGNGGAKSAKWRQQSAAFREAIRSARMVTQAQAKGIPLARLPAAAAAAPDPSLVPCPHCARRFNEAAAERHIPRCSSIRAQP 401
            + QC  CGR FN+ A+GKH  VC +VF++KRKAF+ A+ RVAGTE A+F                             G     A   G K +KW+ QS   R+A+R+ RM+ +A+ +G  +  L   AAA      VPCPHC R+F +  AERHIP C +I+A+P
Sbjct:    1 MVQCHTCGRTFNQLAYGKHAKVCEKVFVKKRKAFNVAEARVAGTEAAKF--------------FDVKKGVPKSELQRPGSGPARAA--GQKMSKWKMQSEQLRQAMRANRMIAEAKERGQDIRTLKFEAAAEELDDRVPCPHCGRKFAQLTAERHIPACKNIKAKP 150          
BLAST of jgi.p|Trimin1|352953 vs. uniprot
Match: A0A5J4XE72_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XE72_9CHLO)

HSP 1 Score: 116 bits (291), Expect = 3.970e-24
Identity = 81/190 (42.63%), Postives = 96/190 (50.53%), Query Frame = 0
Query:  236 LQQCPDCGRRFNEKAFGKHVSVCRQVFLQKRKAFDAAKMRVAGTEMAEF-------TAKTPSGRGSAXXXXXXXXXXXXXXXXXTGD-----DQPVAGNGGAKSAKWRQQSAAFREAIRSARMVTQAQAKGIPLARLPAAA----AAAPDPSLVPCPHCARRFNEAAAERHIPRCSSIRAQPSRLAKGSG 409
            L QC  CGR FN KAF  H  +C +VF  KRKAF+ A+ RVA T    F             G GS+                  G      D+PV G GG   AKWR QS   R        +  A +KG P A + A      A+APDPSL+ CPHC RRFNE AAERHIP+C  I+A+PSRL  G+G
Sbjct:  413 LTQCEGCGRSFNPKAFEVHSRICAKVFQTKRKAFNVAEARVADTGAEHFYDARRGAPKAEAGGIGSSKPGRKPARGGLARGGSGVGASPSHADKPV-GVGGKSGAKWRNQSEQLR--------IAMAASKGGPQAAVTAFGGAPIASAPDPSLILCPHCGRRFNETAAERHIPKCQDIKAKPSRLLAGAG 593          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352953 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z9Y9_9STRA6.120e-310100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4DGN0_HETAK6.230e-3954.01Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D8LNR2_ECTSI8.280e-3852.79Zinc finger, C2H2 type family protein n=2 Tax=Ecto... [more]
A0A812UVN6_SYMMI7.830e-3150.99ZC2HC1A protein n=1 Tax=Symbiodinium microadriatic... [more]
A0A7S3D924_9EUKA3.080e-2642.25Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A5A8D635_CAFRO4.210e-2645.56Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8DGU2_CAFRO1.640e-2540.54Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A7S3G5B9_9EUKA2.170e-2542.25Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A699Z5H0_HAELA4.260e-2539.76Uncharacterized protein n=1 Tax=Haematococcus lacu... [more]
A0A5J4XE72_9CHLO3.970e-2442.63Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 466..491
NoneNo IPR availablePFAMPF13913zf-C2HC_2coord: 235..259
e-value: 8.5E-7
score: 28.7
coord: 371..395
e-value: 9.2E-7
score: 28.6
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 372..399
e-value: 4.3E-5
score: 25.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 469..486
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 466..495
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 306..331
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..214
NoneNo IPR availablePANTHERPTHR13555:SF5ZINC FINGER C2HC DOMAIN-CONTAINING PROTEIN T03G11.3coord: 110..411
IPR027973Protein of unknown function DUF4602PFAMPF15375DUF4602coord: 427..490
e-value: 2.5E-16
score: 60.2
IPR026319Zinc finger C2HC domain-containing proteinPANTHERPTHR13555C2H2 ZINC FINGER CGI-62-RELATEDcoord: 110..411

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_137contigContig_137:378767..385686 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352953mRNA_13833Tribonema minus UTEX_B_3156 mRNAContig_137 378767..385761 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352953|estExt_Genemark1.C_Ctg_1370050 ID=Trimin1|352953|estExt_Genemark1.C_Ctg_1370050|Name=jgi.p|Trimin1|352953|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=496bp
MASAYDARAAGYDPTAWARERQERIHKAAQRPRPSWNNDFVDSNALAPEA
DSSGRRHGTDTVIGRRRDSGGTSSRHAAGASGDGGANLAGGDAEPWRHRH
TTTPKLPWDDGPAPPAPAADADARSGSAENGYHRADARRAHTCAANSAQE
WGDGAAAGWEGGGAMLGTHSGGGGSGGGGGGSRPELLMLLKQKMNSRKGP
RKLSGSLPSRSKSATLPARTSFADMGQPQEYADVQLQQCPDCGRRFNEKA
FGKHVSVCRQVFLQKRKAFDAAKMRVAGTEMAEFTAKTPSGRGSAAAAAR
RAASAASARGGATGDDQPVAGNGGAKSAKWRQQSAAFREAIRSARMVTQA
QAKGIPLARLPAAAAAAPDPSLVPCPHCARRFNEAAAERHIPRCSSIRAQ
PSRLAKGSGRGLGVASRKPSGPGRRFVNDLGTAQFTGKQKKEHEAAKIVA
LGGQAPKAQKMPYKILMGMRNKAKEREAKRLQAEKESGAAARMAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027973DUF4602
IPR026319ZC2HC1