Trimin1|352936|estExt_Genemark1.C_Ctg_1370026 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352936
Unique NameTrimin1|352936|estExt_Genemark1.C_Ctg_1370026
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length372
Homology
BLAST of jgi.p|Trimin1|352936 vs. uniprot
Match: A0A836CLL0_9STRA (Peroxisome biogenesis factor 10 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL0_9STRA)

HSP 1 Score: 647 bits (1668), Expect = 6.580e-233
Identity = 371/371 (100.00%), Postives = 371/371 (100.00%), Query Frame = 0
Query:    1 MERDTYYVGALADGLKDVLESCMGVRRTSMLAAELNLLAGTLYQGLTVLAGRQTVGQEYCDLMFSRNGLCDVPLSARAGYSLVEVCWPYLLSRLDTGWPRLRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLARFGFEFGAQAARKLHGIIFSDGDGSGGXXXXXKANLASQRVPGLSGSDTEAAARRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHYDE 371
            MERDTYYVGALADGLKDVLESCMGVRRTSMLAAELNLLAGTLYQGLTVLAGRQTVGQEYCDLMFSRNGLCDVPLSARAGYSLVEVCWPYLLSRLDTGWPRLRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLARFGFEFGAQAARKLHGIIFSDGDGSGGXXXXXKANLASQRVPGLSGSDTEAAARRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHYDE
Sbjct:    1 MERDTYYVGALADGLKDVLESCMGVRRTSMLAAELNLLAGTLYQGLTVLAGRQTVGQEYCDLMFSRNGLCDVPLSARAGYSLVEVCWPYLLSRLDTGWPRLRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLARFGFEFGAQAARKLHGIIFSDGDGSGGXXXXXKANLASQRVPGLSGSDTEAAARRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHYDE 371          
BLAST of jgi.p|Trimin1|352936 vs. uniprot
Match: A0A6H5JU68_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU68_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 8.940e-52
Identity = 163/411 (39.66%), Postives = 197/411 (47.93%), Query Frame = 0
Query:    2 ERDTYYVGAL-ADGLKDVLESCMGVRRTSMLAAELNLLAGTLYQGLTVLAGRQTVGQEYC--DLMFSRNG--LCDVPLSARA--GYSLVEVCWPYLLSRLDTGWPRLRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDN----------DGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRA-QDAPLPRYTILGVLMLARFGFEFGAQAA-------------------RKLHG-IIFSDGDGSGGXXXXXKANLASQRVPGLSGSDTEAAAR-----RHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHY 369
            ERD YY   L  +G  ++ E+ +G RR  +LA EL  LA  LY GLT LAG+QT+GQEYC  DL+ S  G      PLS R    Y+ + V  PYL  R+  GW  LR +R+PF     A  +               P   A ++     A  D                         XXXXXXXXXXXXXXXXXXXXXXX                 + VL W    HLA F+ +GR+AN AMRA   RL Y R  Q+A   RY +LG+L+L +   E    +A                   R   G  +  +G G               RVP  +   T A        R RC+LCM  RE+ AAT CGHLFCWECIVGWC+TNPECPLCRQP  PQSIVC+Y Y
Sbjct:   22 ERDLYYANRLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPLSRRPLQAYTFLRVAVPYLQERMREGWHGLRSLRDPFGSGGAATSLAAXXXXXXXXXAVAPPVGIAVSSVSGGTAAADRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLRRVLAWARRRRPAMSGVLEWALRLHLAAFYFDGRFANVAMRAVGARLAYARPEQEAARTRYAVLGLLLLLQAAAEAATASAETAERWRATARAALSESFPRSTEGEAVCGEGGGPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSSRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLYQY 432          
BLAST of jgi.p|Trimin1|352936 vs. uniprot
Match: A0A1W0A079_9STRA (Peroxisome assembly protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A079_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.290e-34
Identity = 111/378 (29.37%), Postives = 161/378 (42.59%), Query Frame = 0
Query:    3 RDTYYVGALADGLKDVLESCM-----GVRRTSM-LAAELNLLAGTLYQGLTVLAGRQTVGQEYCDLMFSRNGLCDVPLS--ARAGYSLVEVCWPYLLSRLDTGWPRLRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAF---HLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLARFGFEFGAQAARKLHGIIFSDGDGSGGXXXXXKANLASQRVPGLSGSDTEAAARRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHY 369
            +D YYV  L + + DV+E        G   T M L  EL L++  LY GLT   G QT+G+EYCD+ +   G+    LS  ++A + L+   +PY+  R   GW  L+             R R+ +R      + QQ T  +  A VT    P   G                                                      +  W  +F   HLA F+LNGRY + A RA  +R +  R    P  +++ILG L++ R          + L  ++              KA +    +P  + +DT  A    +CALC+  R H + T CGH+FCWECI+GWC+  PECPLCRQ  +PQ + C+Y+Y
Sbjct:   20 KDDYYVSELLNQVHDVVEKVRFWGRPGSGSTPMSLDPELQLISKLLYLGLT---GSQTMGEEYCDI-YRVQGIMPKMLSTPSKAAWMLLSTVFPYVQERSHLGWANLQPGAAQCQLQQARLRARERLRL-----QGQQHTMIS--APVTTEETPTKLG---------------------------LFLQRLDDLVKKLKSMSKDFETRTGTSLQTWTQSFLVLHLAFFYLNGRYFDMAKRAMGIRYVLTRKLTLPSAQFSILGYLIIIRLAMSSAMYLPQLLRLLLGVQSPSPLVHDNHVKARVPVDDLP--TNTDTIPA---RKCALCLTERSHPSMTPCGHVFCWECIIGWCQNKPECPLCRQQVQPQDVKCIYNY 354          
BLAST of jgi.p|Trimin1|352936 vs. uniprot
Match: T0Q7Z6_SAPDV (RING-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0Q7Z6_SAPDV)

HSP 1 Score: 140 bits (352), Expect = 1.310e-34
Identity = 121/383 (31.59%), Postives = 160/383 (41.78%), Query Frame = 0
Query:    3 RDTYYVGALADGLKDVLESCM--------GVRRTSMLAAELNLLAGTLYQGLTVLAGRQTVGQEYCDLMFSRNGLCDVPLSARAGYSLVEVCW--PYLLSRLDTGWPRLRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGA---FHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLARFGFE--FGAQAA-RKLHGIIFSDGDGSGGXXXXXKANLASQRVPGLSGSDTEAAARRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHY 369
            +D YY   L   L DV+E           G      +  EL LL   LY  +T   G QT+G+EYCD+ +   G     LS  + +S +++    PYL  R   GW  LR    P +  A   R++ A R      + Q    A  +A  TP   P +   +  AY                                                V  W+ A    HLALF+L+GRY + A R A +R +  R  DAP  +++ILG L+L R       G  A  R L G+  +               L   RVP      T  A R+  CALC+  R H A T CGH+FCWECIVGWC+  PECPLCRQ  +PQ + C+Y Y
Sbjct:   25 KDEYYASELLTQLHDVVEKLKFWGRAGGGGAAAQLSIDPELQLLTKFLYLTMT---GSQTMGEEYCDI-YRVEGERPRMLSWTSTFSWLQLATVLPYLQQRSSLGWSNLR----PGEAQA---RLQQARRQARERLQMQTNQHAVVSAPTTPRRAP-SKVDKFLAY--------------------------LDDLVKRAKEMAQTIEARTGTSVTTWMQAAVAVHLALFYLHGRYFDMAKRVAGIRYILTRKLDAPHAQFSILGYLILLRLALSSVLGLSACLRTLLGVEVAP------------RRLDQHRVPSDESRPTVTAQRK--CALCLTERSHPAMTPCGHVFCWECIVGWCQNKPECPLCRQLVQPQDVKCIYSY 355          
BLAST of jgi.p|Trimin1|352936 vs. uniprot
Match: A0A662WDV5_9STRA (RING-type domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WDV5_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.830e-33
Identity = 125/396 (31.57%), Postives = 170/396 (42.93%), Query Frame = 0
Query:    3 RDTYYVGALADGLKDVLESCMGVRRTSMLAAELNLLAGTLYQGLTVLAGR--QTVGQEYCDLMF---SRNGLCD-VPLSARAGYSLVEVCWPYLLSRLDTGWPRLRDI-REPFDRHAEAARIR-DAMRAHAAESESQQPTSAAEAAAVTPVAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLAR-FGFEF----------------GAQAARKLHGI---IFSDGDGSGGXXXXXKANLASQRVPGLSGSDTEAAARRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNP-ECPLCRQPAEPQSIVCVYHY 369
            +D  Y G + + L++VLE   G    S L  EL  LA  LY  L + A +  QT+G+E+CD++    + +G  D V L   A +    +   YL +R  +GW  L  + R P +R  +  R R +A  A AA SE  QP+  +  A + P          D A S   A                                         A V  W    HLA F++  RY++ A R AR++ ++ R    P    ++LG  ML R F   F                  Q AR   G+   +FS  D          AN  SQ+    + +       R +CALC+G R   AAT CGH+FCWECIVGWC+ N  ECPLCRQ   PQ I CVY+Y
Sbjct:   38 KDAVYEGEIKNLLREVLERGCGAHLLSQLLPELTALASLLYHALAIGAQQPGQTLGEEFCDIIRITRTNDGSVDHVRLRRHAVWIACAILPRYLAARSQSGWRNLSQLTRTPRERMEQQLRSRQEAAVATAASSEGAQPSQESRLAMLGPQRVLQQ---LDRAVSKLKA-----------------------WGAWIESDVFPASYEFSMACVQHWGIHAHLAAFYVFARYSHLAKRLARIQYVFVRKDLTPRINLSLLGYTMLLRLFATAFVELKRLHSHYKLEKKQRQQEARASAGVPATLFSHSDRVPTSFSIVDANSESQQQQPDTSTIVGRRQSRRKCALCLGERVSPAATPCGHVFCWECIVGWCQKNKAECPLCRQETHPQQIKCVYNY 407          
BLAST of jgi.p|Trimin1|352936 vs. uniprot
Match: A0A1V9Y5Y1_9STRA (Peroxisome assembly protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y5Y1_9STRA)

HSP 1 Score: 136 bits (342), Expect = 3.190e-33
Identity = 114/378 (30.16%), Postives = 153/378 (40.48%), Query Frame = 0
Query:    3 RDTYYVGALADGLKDVLESCMGVRRTSMLAA------ELNLLAGTLYQGLTVLAGRQTVGQEYCDLMFSRNGLCDVPLSA--RAGYSLVEVCWPYLLSRLDTGWPRLRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGA---FHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLARFGFEFGAQAARKLHGIIFSDGDGSGGXXXXXKANLASQRVPGLSGSDTEAAARRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHY 369
            +D YYV  +   L DV+E      R+   AA      EL+++A  LY   T   G QT+G+EYCD+   + GL   PLS   +  + L+    PY+  R   GW  L     P ++ A   + R   R      E Q    +A      PVA P      DA      A                                           V  W       HLALF+LNG+Y   A R   +R +  R   AP  +++ILG L++ R       Q    L  ++                 L   RVP  + +      R+  CALC+  R H A T CGH+FCWECIVGWC + PECPLCRQ   PQ + C+Y+Y
Sbjct:   23 KDEYYVSEVLTQLHDVVEKLKFWGRSGSSAAPAALDPELSVVAHLLYLTTT---GSQTMGEEYCDIYRVKGGL---PLSTMTKTLWLLMTTVLPYVQQRSHAGWTNLH----PGEQQARLQQARRLARERLQLQEQQHVVVSA------PVASPRAPSRLDAFLRRLDALVARAKAAAQAVEAKT------------------------GTTVATWAQTAVVLHLALFYLNGKYFAGAKRIFGIRYVLTRQLTAPAAQFSILGYLIVLRVALSSVMQLPTFLRALL---------GVQAVTPLLDHSRVPAETPTAPTGGGRK--CALCLAERSHPALTPCGHVFCWECIVGWCASKPECPLCRQAVLPQDVKCMYNY 349          
BLAST of jgi.p|Trimin1|352936 vs. uniprot
Match: A0A485LD12_9STRA (Aste57867_19380 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LD12_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.120e-30
Identity = 112/400 (28.00%), Postives = 164/400 (41.00%), Query Frame = 0
Query:    1 MERDTYYVGALADGLKDVLESCMGVRR----TSMLAA----ELNLLAGTLY-----------------QGLTVLAGRQTVGQEYCDLMFSRNGLCDVPLSARAG------YSLVEVCWPYLLSRLDTGWPRLRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLARFGFEFGAQAARKLHGIIFSDGDGSGGXXXXXKANLASQRVPGLSGSDTEAAARRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHY 369
            M +D +YV    + + DV+E     RR    T +L      EL LL+  LY                   LT LAG Q++G+EYC++ +   G  D   ++  G      + L+E    Y   R   GW +LR   +         R R+ M+        Q PTS   +   TP AP  +   RDA                                                  ++  L   HLALFFLNGRY + + R A +R + ++    P  ++ ILG ++L R            +  ++     G         A +  +RVP  +G   +   +  +CALC+  R H + T CGH+FCWECIVGWC++ PECPLCRQ   PQ + C+Y+Y
Sbjct:   14 MTKDDFYVSQFQNSINDVVEKIKFWRRSDSPTGVLQIPFDPELQLLSKVLYYIVTGMEDISMNVALSSSRLTFLAGSQSLGEEYCEV-YRLQG--DPAAASVVGGGRTLLWLLLETLPSYFKQRSLLGWTQLRPGEQEQRLQEARNRAREQMQLRR-----QNPTSTVIS---TPAAPETSAADRDATSG-------------SWIDARLKSMDALVKRTKESVKLWEARTGLSVDGIVHGLAQCHLALFFLNGRYFHISKRVAGLRYVLSQRLSQPFAQFAILGYMILVRAMISACLALPPAMRCLL-----GHQVANSRPAAMVEGKRVPADTGVSPK---QTKKCALCLTERSHPSMTPCGHVFCWECIVGWCQSKPECPLCRQVVLPQDVKCLYNY 381          
BLAST of jgi.p|Trimin1|352936 vs. uniprot
Match: A0A225X0M0_9STRA (Peroxisome assembly protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X0M0_9STRA)

HSP 1 Score: 127 bits (319), Expect = 8.180e-30
Identity = 110/383 (28.72%), Postives = 165/383 (43.08%), Query Frame = 0
Query:    3 RDTYYVGALADGLKDVLESCMGVRRTSMLAAELNLLAGTLYQGLTVLAGR--QTVGQEYCDLM-FSRNGLCDVPLSARAGYSLVEVCW---PYLLSRLDTGWPRLRDI-REPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLARFGFEFGAQAARKLHGIIFSDG-----DGSGGXXXXXKANLASQRVP-GLSGSDTEAAAR--RHRCALCMGPREHTAATLCGHLFCWECIVGWCETNP-ECPLCRQPAEPQSIVCVYHY 369
            +D  Y G L + L++VLE   G    S L  EL  L+  LY  L++ + +  QT+G+E+CD++  ++ G   V       ++L   C     YL +R  +GW  L  + R P +R  +  R+R          E+   TS ++A       P       D A S   A                                         A V +W    HLA+F++  +Y + A R A ++ ++ R    P    ++LG +M  R          +++HG    +      +          +   S+RVP  LS   +E   R  R +CALC+G R   AAT CGH+FCWEC+VGWC+ N  ECPLCRQ   PQ I C+Y+Y
Sbjct:   22 KDEVYEGELKNLLREVLERGCGAHLLSQLLPELGALSSLLYHALSIGSQQPGQTLGEEFCDIIRVTKPGSAPVEPVRHRRHALWLACVLLPRYLTARSQSGWKNLSQLTRTPRERMEQQLRLRQ---------EAAGDTSTSDA-------PESLLKLLDRAVSKLKAVSAWMETEVFPASYEF-----------------------SLACVQQWGAHAHLAVFYICAQYLHVAKRIANIQYVFVRKDLMPGMNLSLLGYMMSLRL-LATAIVELKRVHGCYKHEKKQRQQEARAAAGIPATSVAQSERVPTALSLQQSERGGRPSRRKCALCLGERVSPAATPCGHVFCWECVVGWCQKNKAECPLCRQETHPQQIKCIYNY 364          
BLAST of jgi.p|Trimin1|352936 vs. uniprot
Match: A0A2D4CDT0_PYTIN (RING-type domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDT0_PYTIN)

HSP 1 Score: 127 bits (318), Expect = 1.090e-29
Identity = 107/381 (28.08%), Postives = 162/381 (42.52%), Query Frame = 0
Query:    2 ERDTYYVGALADGLKDVLESCMGVRRTSMLAAELNLLAGTLYQGLTVLAGR----QTVGQEYCDLMFSRNGLCDVPLSARAGYSL---VEVCWPYLLSRLDTGWPRLRDIR-EPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLARFGFEFGAQAARKLHGIIFSDGDGSGGXXXXXKANLASQRVPGLSGSD----TEAAARRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNP-ECPLCRQPAEPQSIVCVYHY 369
            ++D  Y   + + L+D+LE C+G    S L  EL+  +  LY  L V  GR    QT+G+E+CD++   +   +     R+ + L   + V   YL +R   GW RL  +   P +R A+  R R            QQ ++ A  AA T         +R A  S                                             + +L W+   HLA F+++ R+ +   R A +  ++ R+   P    ++LG LM  R      A   ++   +   +     G      +     RVP  + +     T A A++ +CALC+G R   A T CGH+FCWECIVGWC+ N  ECPLCRQ   PQ I C+Y+Y
Sbjct:   19 KKDAVYESEVKNLLRDLLERCVGPHVLSQLLPELSAASTLLY--LLVTLGRKQPQQTLGEEFCDVLRVTHDGGNARAVGRSRHLLWVALAVLPTYLSARSRMGWHRLSQLTTSPRERMAQQLRER------------QQASANATNAATT---------ARPATRSPLQLLDRLVAVVREALETLQQRIVPSSYEF-------------ALSPLLSWIAQLHLARFYVSTRFLDITKRLASIEYVFVRSDVQPALNLSLLGYLMSVRL-LSTAAMELKRFAKLRRQEAKQRLGESLPEGSYCQPTRVPTAASAPALVPTAAGAKKRKCALCLGERVSPATTPCGHVFCWECIVGWCQKNKTECPLCRQETHPQQIKCIYNY 362          
BLAST of jgi.p|Trimin1|352936 vs. uniprot
Match: UPI00053F43F9 (peroxisome biogenesis factor 10 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F43F9)

HSP 1 Score: 127 bits (319), Expect = 1.360e-29
Identity = 106/386 (27.46%), Postives = 162/386 (41.97%), Query Frame = 0
Query:    2 ERDTYYVGALADGLKDVLESCMGVRRTSMLAAELNLLAGTLYQGLTVLAGRQTVGQEYCDLM--FSRNGLCDVPLSARAGYSLVEVCWPYLLSRLDTGWPRLRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLARFGFEFGAQAARKLHGII------------FSDGDGSGGXXXXXKANLA---SQRVPGLSGSDTEAAARRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHYD 370
            E+D +Y   ++D  +D      G R T    ++  LL   LY  LT  AG+QT+G+EYCD++      GL   P + RA Y L +   PY+  R+ +   R+   R  F   + +    D+     ++  S  P+S+    + + +A       R   Y +                                           A  +L+ +   +L LF+  G Y + + R + +R M+        PRY ILGV +L +      A+A R+ +               +    G+G      + +L    S +V  LS S +  A    +C LC+G REH  AT CGH+FCW CI+ WC   PECPLCR P    S+VC+YH D
Sbjct:   49 EKDDHYASFVSDACRDAFRHLFGARLTVAYHSQTKLLGQMLYYILTTGAGQQTLGEEYCDIVQIAGSYGLPPTP-ARRALYILYQTAVPYIAERMSS---RIAS-RGMFLAESHSDEFGDSSSPRNSQLGSGTPSSSTSQISTSSLARLKGRFRRLRMYII----------------------------------HQWPTVLPVAREILQLILRTNLMLFYFEGLYYHISKRTSGIRYMFIGKPSNQRPRYQILGVFLLIQLCV-IAAEALRRTNLSTLGSSTRLASLGTYQHSAGTGLPVLNEEGDLITSDSDKVSFLSESTSAEAKGATKCTLCLGNREHPTATPCGHVFCWNCIMEWCNEKPECPLCRTPLTHSSLVCLYHSD 394          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352936 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CLL0_9STRA6.580e-233100.00Peroxisome biogenesis factor 10 n=1 Tax=Tribonema ... [more]
A0A6H5JU68_9PHAE8.940e-5239.66RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A1W0A079_9STRA1.290e-3429.37Peroxisome assembly protein n=1 Tax=Thraustotheca ... [more]
T0Q7Z6_SAPDV1.310e-3431.59RING-type domain-containing protein n=2 Tax=Saprol... [more]
A0A662WDV5_9STRA1.830e-3331.57RING-type domain-containing protein n=2 Tax=Nothop... [more]
A0A1V9Y5Y1_9STRA3.190e-3330.16Peroxisome assembly protein n=1 Tax=Achlya hypogyn... [more]
A0A485LD12_9STRA1.120e-3028.00Aste57867_19380 protein n=1 Tax=Aphanomyces stella... [more]
A0A225X0M0_9STRA8.180e-3028.72Peroxisome assembly protein n=1 Tax=Phytophthora m... [more]
A0A2D4CDT0_PYTIN1.090e-2928.08RING-type domain-containing protein n=2 Tax=Pythiu... [more]
UPI00053F43F91.360e-2927.46peroxisome biogenesis factor 10 n=1 Tax=Beta vulga... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 317..354
e-value: 3.1E-5
score: 33.4
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 316..355
e-value: 2.5E-7
score: 30.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 317..355
score: 12.149959
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 297..370
e-value: 2.6E-12
score: 47.9
IPR006845Pex, N-terminalPFAMPF04757Pex2_Pex12coord: 4..265
e-value: 4.6E-19
score: 68.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..148
NoneNo IPR availablePANTHERPTHR23350PEROXISOME ASSEMBLY PROTEIN 10coord: 2..369
NoneNo IPR availablePANTHERPTHR23350:SF0PEROXISOME BIOGENESIS FACTOR 10coord: 2..369
NoneNo IPR availableCDDcd16527RING-HC_PEX10coord: 316..355
e-value: 3.09001E-20
score: 80.7236
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 316..360
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 332..341

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_137contigContig_137:207987..209763 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352936mRNA_13805Tribonema minus UTEX_B_3156 mRNAContig_137 207972..209763 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352936|estExt_Genemark1.C_Ctg_1370026 ID=Trimin1|352936|estExt_Genemark1.C_Ctg_1370026|Name=jgi.p|Trimin1|352936|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=372bp
MERDTYYVGALADGLKDVLESCMGVRRTSMLAAELNLLAGTLYQGLTVLA
GRQTVGQEYCDLMFSRNGLCDVPLSARAGYSLVEVCWPYLLSRLDTGWPR
LRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDN
DGSRDAAYSVCSATAGGTSSAAAKAQVAATAAAAAAARALRRAWAAAARR
RRGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRY
TILGVLMLARFGFEFGAQAARKLHGIIFSDGDGSGGAGGAGKANLASQRV
PGLSGSDTEAAARRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPE
CPLCRQPAEPQSIVCVYHYDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR006845Pex_N
IPR017907Znf_RING_CS