mRNA_13805 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|352936
Unique NamemRNA_13805
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|352936 vs. uniprot
Match: A0A836CLL0_9STRA (Peroxisome biogenesis factor 10 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL0_9STRA)

HSP 1 Score: 646 bits (1666), Expect = 1.620e-232
Identity = 371/371 (100.00%), Postives = 371/371 (100.00%), Query Frame = 1
Query:    1 MERDTYYVGALADGLKDVLESCMGVRRTSMLAAELNLLAGTLYQGLTVLAGRQTVGQEYCDLMFSRNGLCDVPLSARAGYSLVEVCWPYLLSRLDTGWPRLRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLARFGFEFGAQAARKLHGIIFSDGDGSGGXXXXXKANLASQRVPGLSGSDTEAAARRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHYDE 1113
            MERDTYYVGALADGLKDVLESCMGVRRTSMLAAELNLLAGTLYQGLTVLAGRQTVGQEYCDLMFSRNGLCDVPLSARAGYSLVEVCWPYLLSRLDTGWPRLRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLARFGFEFGAQAARKLHGIIFSDGDGSGGXXXXXKANLASQRVPGLSGSDTEAAARRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHYDE
Sbjct:    1 MERDTYYVGALADGLKDVLESCMGVRRTSMLAAELNLLAGTLYQGLTVLAGRQTVGQEYCDLMFSRNGLCDVPLSARAGYSLVEVCWPYLLSRLDTGWPRLRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLARFGFEFGAQAARKLHGIIFSDGDGSGGXXXXXKANLASQRVPGLSGSDTEAAARRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHYDE 371          
BLAST of jgi.p|Trimin1|352936 vs. uniprot
Match: A0A6H5JU68_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU68_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 2.020e-51
Identity = 163/411 (39.66%), Postives = 197/411 (47.93%), Query Frame = 1
Query:    4 ERDTYYVGAL-ADGLKDVLESCMGVRRTSMLAAELNLLAGTLYQGLTVLAGRQTVGQEYC--DLMFSRNG--LCDVPLSARA--GYSLVEVCWPYLLSRLDTGWPRLRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDN----------DGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRA-QDAPLPRYTILGVLMLARFGFEFGAQAA-------------------RKLHG-IIFSDGDGSGGXXXXXKANLASQRVPGLSGSDTEAAAR-----RHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHY 1107
            ERD YY   L  +G  ++ E+ +G RR  +LA EL  LA  LY GLT LAG+QT+GQEYC  DL+ S  G      PLS R    Y+ + V  PYL  R+  GW  LR +R+PF     A  +               P   A ++     A  D                         XXXXXXXXXXXXXXXXXXXXXXX                 + VL W    HLA F+ +GR+AN AMRA   RL Y R  Q+A   RY +LG+L+L +   E    +A                   R   G  +  +G G               RVP  +   T A        R RC+LCM  RE+ AAT CGHLFCWECIVGWC+TNPECPLCRQP  PQSIVC+Y Y
Sbjct:   22 ERDLYYANRLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESSPLSRRPLQAYTFLRVAVPYLQERMREGWHGLRSLRDPFGSGGAATSLAAXXXXXXXXXAVAPPVGIAVSSVSGGTAAADRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLRRVLAWARRRRPAMSGVLEWALRLHLAAFYFDGRFANVAMRAVGARLAYARPEQEAARTRYAVLGLLLLLQAAAEAATASAETAERWRATARAALSESFPRSTEGEAVCGEGGGPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSSRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLYQY 432          
BLAST of jgi.p|Trimin1|352936 vs. uniprot
Match: A0A1W0A079_9STRA (Peroxisome assembly protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A079_9STRA)

HSP 1 Score: 139 bits (350), Expect = 2.790e-34
Identity = 111/378 (29.37%), Postives = 161/378 (42.59%), Query Frame = 1
Query:    7 RDTYYVGALADGLKDVLESCM-----GVRRTSM-LAAELNLLAGTLYQGLTVLAGRQTVGQEYCDLMFSRNGLCDVPLS--ARAGYSLVEVCWPYLLSRLDTGWPRLRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAF---HLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLARFGFEFGAQAARKLHGIIFSDGDGSGGXXXXXKANLASQRVPGLSGSDTEAAARRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHY 1107
            +D YYV  L + + DV+E        G   T M L  EL L++  LY GLT   G QT+G+EYCD+ +   G+    LS  ++A + L+   +PY+  R   GW  L+             R R+ +R      + QQ T  +  A VT    P   G                                                      +  W  +F   HLA F+LNGRY + A RA  +R +  R    P  +++ILG L++ R          + L  ++              KA +    +P  + +DT  A    +CALC+  R H + T CGH+FCWECI+GWC+  PECPLCRQ  +PQ + C+Y+Y
Sbjct:   20 KDDYYVSELLNQVHDVVEKVRFWGRPGSGSTPMSLDPELQLISKLLYLGLT---GSQTMGEEYCDI-YRVQGIMPKMLSTPSKAAWMLLSTVFPYVQERSHLGWANLQPGAAQCQLQQARLRARERLRL-----QGQQHTMIS--APVTTEETPTKLG---------------------------LFLQRLDDLVKKLKSMSKDFETRTGTSLQTWTQSFLVLHLAFFYLNGRYFDMAKRAMGIRYVLTRKLTLPSAQFSILGYLIIIRLAMSSAMYLPQLLRLLLGVQSPSPLVHDNHVKARVPVDDLP--TNTDTIPA---RKCALCLTERSHPSMTPCGHVFCWECIIGWCQNKPECPLCRQQVQPQDVKCIYNY 354          
BLAST of jgi.p|Trimin1|352936 vs. uniprot
Match: T0Q7Z6_SAPDV (RING-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0Q7Z6_SAPDV)

HSP 1 Score: 139 bits (350), Expect = 2.850e-34
Identity = 121/383 (31.59%), Postives = 160/383 (41.78%), Query Frame = 1
Query:    7 RDTYYVGALADGLKDVLESCM--------GVRRTSMLAAELNLLAGTLYQGLTVLAGRQTVGQEYCDLMFSRNGLCDVPLSARAGYSLVEVCW--PYLLSRLDTGWPRLRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGA---FHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLARFGFE--FGAQAA-RKLHGIIFSDGDGSGGXXXXXKANLASQRVPGLSGSDTEAAARRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHY 1107
            +D YY   L   L DV+E           G      +  EL LL   LY  +T   G QT+G+EYCD+ +   G     LS  + +S +++    PYL  R   GW  LR    P +  A   R++ A R      + Q    A  +A  TP   P +   +  AY                                                V  W+ A    HLALF+L+GRY + A R A +R +  R  DAP  +++ILG L+L R       G  A  R L G+  +               L   RVP      T  A R+  CALC+  R H A T CGH+FCWECIVGWC+  PECPLCRQ  +PQ + C+Y Y
Sbjct:   25 KDEYYASELLTQLHDVVEKLKFWGRAGGGGAAAQLSIDPELQLLTKFLYLTMT---GSQTMGEEYCDI-YRVEGERPRMLSWTSTFSWLQLATVLPYLQQRSSLGWSNLR----PGEAQA---RLQQARRQARERLQMQTNQHAVVSAPTTPRRAP-SKVDKFLAY--------------------------LDDLVKRAKEMAQTIEARTGTSVTTWMQAAVAVHLALFYLHGRYFDMAKRVAGIRYILTRKLDAPHAQFSILGYLILLRLALSSVLGLSACLRTLLGVEVAP------------RRLDQHRVPSDESRPTVTAQRK--CALCLTERSHPAMTPCGHVFCWECIVGWCQNKPECPLCRQLVQPQDVKCIYSY 355          
BLAST of jgi.p|Trimin1|352936 vs. uniprot
Match: A0A662WDV5_9STRA (RING-type domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WDV5_9STRA)

HSP 1 Score: 137 bits (345), Expect = 3.920e-33
Identity = 125/396 (31.57%), Postives = 170/396 (42.93%), Query Frame = 1
Query:    7 RDTYYVGALADGLKDVLESCMGVRRTSMLAAELNLLAGTLYQGLTVLAGR--QTVGQEYCDLMF---SRNGLCD-VPLSARAGYSLVEVCWPYLLSRLDTGWPRLRDI-REPFDRHAEAARIR-DAMRAHAAESESQQPTSAAEAAAVTPVAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLAR-FGFEF----------------GAQAARKLHGI---IFSDGDGSGGXXXXXKANLASQRVPGLSGSDTEAAARRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNP-ECPLCRQPAEPQSIVCVYHY 1107
            +D  Y G + + L++VLE   G    S L  EL  LA  LY  L + A +  QT+G+E+CD++    + +G  D V L   A +    +   YL +R  +GW  L  + R P +R  +  R R +A  A AA SE  QP+  +  A + P          D A S   A                                         A V  W    HLA F++  RY++ A R AR++ ++ R    P    ++LG  ML R F   F                  Q AR   G+   +FS  D          AN  SQ+    + +       R +CALC+G R   AAT CGH+FCWECIVGWC+ N  ECPLCRQ   PQ I CVY+Y
Sbjct:   38 KDAVYEGEIKNLLREVLERGCGAHLLSQLLPELTALASLLYHALAIGAQQPGQTLGEEFCDIIRITRTNDGSVDHVRLRRHAVWIACAILPRYLAARSQSGWRNLSQLTRTPRERMEQQLRSRQEAAVATAASSEGAQPSQESRLAMLGPQRVLQQ---LDRAVSKLKA-----------------------WGAWIESDVFPASYEFSMACVQHWGIHAHLAAFYVFARYSHLAKRLARIQYVFVRKDLTPRINLSLLGYTMLLRLFATAFVELKRLHSHYKLEKKQRQQEARASAGVPATLFSHSDRVPTSFSIVDANSESQQQQPDTSTIVGRRQSRRKCALCLGERVSPAATPCGHVFCWECIVGWCQKNKAECPLCRQETHPQQIKCVYNY 407          
BLAST of jgi.p|Trimin1|352936 vs. uniprot
Match: A0A1V9Y5Y1_9STRA (Peroxisome assembly protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y5Y1_9STRA)

HSP 1 Score: 135 bits (340), Expect = 6.870e-33
Identity = 114/378 (30.16%), Postives = 153/378 (40.48%), Query Frame = 1
Query:    7 RDTYYVGALADGLKDVLESCMGVRRTSMLAA------ELNLLAGTLYQGLTVLAGRQTVGQEYCDLMFSRNGLCDVPLSA--RAGYSLVEVCWPYLLSRLDTGWPRLRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGA---FHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLARFGFEFGAQAARKLHGIIFSDGDGSGGXXXXXKANLASQRVPGLSGSDTEAAARRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHY 1107
            +D YYV  +   L DV+E      R+   AA      EL+++A  LY   T   G QT+G+EYCD+   + GL   PLS   +  + L+    PY+  R   GW  L     P ++ A   + R   R      E Q    +A      PVA P      DA      A                                           V  W       HLALF+LNG+Y   A R   +R +  R   AP  +++ILG L++ R       Q    L  ++                 L   RVP  + +      R+  CALC+  R H A T CGH+FCWECIVGWC + PECPLCRQ   PQ + C+Y+Y
Sbjct:   23 KDEYYVSEVLTQLHDVVEKLKFWGRSGSSAAPAALDPELSVVAHLLYLTTT---GSQTMGEEYCDIYRVKGGL---PLSTMTKTLWLLMTTVLPYVQQRSHAGWTNLH----PGEQQARLQQARRLARERLQLQEQQHVVVSA------PVASPRAPSRLDAFLRRLDALVARAKAAAQAVEAKT------------------------GTTVATWAQTAVVLHLALFYLNGKYFAGAKRIFGIRYVLTRQLTAPAAQFSILGYLIVLRVALSSVMQLPTFLRALL---------GVQAVTPLLDHSRVPAETPTAPTGGGRK--CALCLAERSHPALTPCGHVFCWECIVGWCASKPECPLCRQAVLPQDVKCMYNY 349          
BLAST of jgi.p|Trimin1|352936 vs. uniprot
Match: A0A485LD12_9STRA (Aste57867_19380 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LD12_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.390e-30
Identity = 112/400 (28.00%), Postives = 164/400 (41.00%), Query Frame = 1
Query:    1 MERDTYYVGALADGLKDVLESCMGVRR----TSMLAA----ELNLLAGTLY-----------------QGLTVLAGRQTVGQEYCDLMFSRNGLCDVPLSARAG------YSLVEVCWPYLLSRLDTGWPRLRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLARFGFEFGAQAARKLHGIIFSDGDGSGGXXXXXKANLASQRVPGLSGSDTEAAARRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHY 1107
            M +D +YV    + + DV+E     RR    T +L      EL LL+  LY                   LT LAG Q++G+EYC++ +   G  D   ++  G      + L+E    Y   R   GW +LR   +         R R+ M+        Q PTS   +   TP AP  +   RDA                                                  ++  L   HLALFFLNGRY + + R A +R + ++    P  ++ ILG ++L R            +  ++     G         A +  +RVP  +G   +   +  +CALC+  R H + T CGH+FCWECIVGWC++ PECPLCRQ   PQ + C+Y+Y
Sbjct:   14 MTKDDFYVSQFQNSINDVVEKIKFWRRSDSPTGVLQIPFDPELQLLSKVLYYIVTGMEDISMNVALSSSRLTFLAGSQSLGEEYCEV-YRLQG--DPAAASVVGGGRTLLWLLLETLPSYFKQRSLLGWTQLRPGEQEQRLQEARNRAREQMQLRR-----QNPTSTVIS---TPAAPETSAADRDATSG-------------SWIDARLKSMDALVKRTKESVKLWEARTGLSVDGIVHGLAQCHLALFFLNGRYFHISKRVAGLRYVLSQRLSQPFAQFAILGYMILVRAMISACLALPPAMRCLL-----GHQVANSRPAAMVEGKRVPADTGVSPK---QTKKCALCLTERSHPSMTPCGHVFCWECIVGWCQSKPECPLCRQVVLPQDVKCLYNY 381          
BLAST of jgi.p|Trimin1|352936 vs. uniprot
Match: A0A225X0M0_9STRA (Peroxisome assembly protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X0M0_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.740e-29
Identity = 110/383 (28.72%), Postives = 165/383 (43.08%), Query Frame = 1
Query:    7 RDTYYVGALADGLKDVLESCMGVRRTSMLAAELNLLAGTLYQGLTVLAGR--QTVGQEYCDLM-FSRNGLCDVPLSARAGYSLVEVCW---PYLLSRLDTGWPRLRDI-REPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLARFGFEFGAQAARKLHGIIFSDG-----DGSGGXXXXXKANLASQRVP-GLSGSDTEAAAR--RHRCALCMGPREHTAATLCGHLFCWECIVGWCETNP-ECPLCRQPAEPQSIVCVYHY 1107
            +D  Y G L + L++VLE   G    S L  EL  L+  LY  L++ + +  QT+G+E+CD++  ++ G   V       ++L   C     YL +R  +GW  L  + R P +R  +  R+R          E+   TS ++A       P       D A S   A                                         A V +W    HLA+F++  +Y + A R A ++ ++ R    P    ++LG +M  R          +++HG    +      +          +   S+RVP  LS   +E   R  R +CALC+G R   AAT CGH+FCWEC+VGWC+ N  ECPLCRQ   PQ I C+Y+Y
Sbjct:   22 KDEVYEGELKNLLREVLERGCGAHLLSQLLPELGALSSLLYHALSIGSQQPGQTLGEEFCDIIRVTKPGSAPVEPVRHRRHALWLACVLLPRYLTARSQSGWKNLSQLTRTPRERMEQQLRLRQ---------EAAGDTSTSDA-------PESLLKLLDRAVSKLKAVSAWMETEVFPASYEF-----------------------SLACVQQWGAHAHLAVFYICAQYLHVAKRIANIQYVFVRKDLMPGMNLSLLGYMMSLRL-LATAIVELKRVHGCYKHEKKQRQQEARAAAGIPATSVAQSERVPTALSLQQSERGGRPSRRKCALCLGERVSPAATPCGHVFCWECVVGWCQKNKAECPLCRQETHPQQIKCIYNY 364          
BLAST of jgi.p|Trimin1|352936 vs. uniprot
Match: A0A2D4CDT0_PYTIN (RING-type domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDT0_PYTIN)

HSP 1 Score: 126 bits (316), Expect = 2.320e-29
Identity = 107/381 (28.08%), Postives = 162/381 (42.52%), Query Frame = 1
Query:    4 ERDTYYVGALADGLKDVLESCMGVRRTSMLAAELNLLAGTLYQGLTVLAGR----QTVGQEYCDLMFSRNGLCDVPLSARAGYSL---VEVCWPYLLSRLDTGWPRLRDIR-EPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLARFGFEFGAQAARKLHGIIFSDGDGSGGXXXXXKANLASQRVPGLSGSD----TEAAARRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNP-ECPLCRQPAEPQSIVCVYHY 1107
            ++D  Y   + + L+D+LE C+G    S L  EL+  +  LY  L V  GR    QT+G+E+CD++   +   +     R+ + L   + V   YL +R   GW RL  +   P +R A+  R R            QQ ++ A  AA T         +R A  S                                             + +L W+   HLA F+++ R+ +   R A +  ++ R+   P    ++LG LM  R      A   ++   +   +     G      +     RVP  + +     T A A++ +CALC+G R   A T CGH+FCWECIVGWC+ N  ECPLCRQ   PQ I C+Y+Y
Sbjct:   19 KKDAVYESEVKNLLRDLLERCVGPHVLSQLLPELSAASTLLY--LLVTLGRKQPQQTLGEEFCDVLRVTHDGGNARAVGRSRHLLWVALAVLPTYLSARSRMGWHRLSQLTTSPRERMAQQLRER------------QQASANATNAATT---------ARPATRSPLQLLDRLVAVVREALETLQQRIVPSSYEF-------------ALSPLLSWIAQLHLARFYVSTRFLDITKRLASIEYVFVRSDVQPALNLSLLGYLMSVRL-LSTAAMELKRFAKLRRQEAKQRLGESLPEGSYCQPTRVPTAASAPALVPTAAGAKKRKCALCLGERVSPATTPCGHVFCWECIVGWCQKNKTECPLCRQETHPQQIKCIYNY 362          
BLAST of jgi.p|Trimin1|352936 vs. uniprot
Match: UPI00053F43F9 (peroxisome biogenesis factor 10 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F43F9)

HSP 1 Score: 126 bits (317), Expect = 2.880e-29
Identity = 106/386 (27.46%), Postives = 162/386 (41.97%), Query Frame = 1
Query:    4 ERDTYYVGALADGLKDVLESCMGVRRTSMLAAELNLLAGTLYQGLTVLAGRQTVGQEYCDLM--FSRNGLCDVPLSARAGYSLVEVCWPYLLSRLDTGWPRLRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLARFGFEFGAQAARKLHGII------------FSDGDGSGGXXXXXKANLA---SQRVPGLSGSDTEAAARRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHYD 1110
            E+D +Y   ++D  +D      G R T    ++  LL   LY  LT  AG+QT+G+EYCD++      GL   P + RA Y L +   PY+  R+ +   R+   R  F   + +    D+     ++  S  P+S+    + + +A       R   Y +                                           A  +L+ +   +L LF+  G Y + + R + +R M+        PRY ILGV +L +      A+A R+ +               +    G+G      + +L    S +V  LS S +  A    +C LC+G REH  AT CGH+FCW CI+ WC   PECPLCR P    S+VC+YH D
Sbjct:   49 EKDDHYASFVSDACRDAFRHLFGARLTVAYHSQTKLLGQMLYYILTTGAGQQTLGEEYCDIVQIAGSYGLPPTP-ARRALYILYQTAVPYIAERMSS---RIAS-RGMFLAESHSDEFGDSSSPRNSQLGSGTPSSSTSQISTSSLARLKGRFRRLRMYII----------------------------------HQWPTVLPVAREILQLILRTNLMLFYFEGLYYHISKRTSGIRYMFIGKPSNQRPRYQILGVFLLIQLCV-IAAEALRRTNLSTLGSSTRLASLGTYQHSAGTGLPVLNEEGDLITSDSDKVSFLSESTSAEAKGATKCTLCLGNREHPTATPCGHVFCWNCIMEWCNEKPECPLCRTPLTHSSLVCLYHSD 394          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352936 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CLL0_9STRA1.620e-232100.00Peroxisome biogenesis factor 10 n=1 Tax=Tribonema ... [more]
A0A6H5JU68_9PHAE2.020e-5139.66RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A1W0A079_9STRA2.790e-3429.37Peroxisome assembly protein n=1 Tax=Thraustotheca ... [more]
T0Q7Z6_SAPDV2.850e-3431.59RING-type domain-containing protein n=2 Tax=Saprol... [more]
A0A662WDV5_9STRA3.920e-3331.57RING-type domain-containing protein n=2 Tax=Nothop... [more]
A0A1V9Y5Y1_9STRA6.870e-3330.16Peroxisome assembly protein n=1 Tax=Achlya hypogyn... [more]
A0A485LD12_9STRA2.390e-3028.00Aste57867_19380 protein n=1 Tax=Aphanomyces stella... [more]
A0A225X0M0_9STRA1.740e-2928.72Peroxisome assembly protein n=1 Tax=Phytophthora m... [more]
A0A2D4CDT0_PYTIN2.320e-2928.08RING-type domain-containing protein n=2 Tax=Pythiu... [more]
UPI00053F43F92.880e-2927.46peroxisome biogenesis factor 10 n=1 Tax=Beta vulga... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_137contigContig_137:207972..209763 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|352936|estExt_Genemark1.C_Ctg_1370026
KEGG TC3.A.20.1
BRITEko00000,ko00001,ko04121
KEGG Pathwayko04146,map04146
KEGG koko:K13346
GOsGO:0000003,GO:0000038,GO:0000209,GO:0000280,GO:0000910,GO:0003006,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005778,GO:0005779,GO:0005829,GO:0006082,GO:0006464,GO:0006513,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0007049,GO:0007112,GO:0007140,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007285,GO:0007286,GO:0008022,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009062,GO:0009790,GO:0009791,GO:0009793,GO:0009853,GO:0009987,GO:0010154,GO:0010381,GO:0015031,GO:0015833,GO:0015919,GO:0016020,GO:0016021,GO:0016042,GO:0016043,GO:0016049,GO:0016054,GO:0016558,GO:0016567,GO:0016740,GO:0017038,GO:0019395,GO:0019538,GO:0019752,GO:0019787,GO:0019953,GO:0022402,GO:0022406,GO:0022412,GO:0022414,GO:0030154,GO:0030258,GO:0031090,GO:0031224,GO:0031231,GO:0031300,GO:0031301,GO:0031903,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032991,GO:0033036,GO:0033206,GO:0033365,GO:0034440,GO:0034613,GO:0036211,GO:0040007,GO:0042579,GO:0042760,GO:0042886,GO:0043094,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043436,GO:0043574,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044425,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044743,GO:0045184,GO:0046395,GO:0046872,GO:0046907,GO:0046914,GO:0048137,GO:0048232,GO:0048285,GO:0048316,GO:0048468,GO:0048515,GO:0048588,GO:0048589,GO:0048608,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0051179,GO:0051234,GO:0051301,GO:0051321,GO:0051640,GO:0051641,GO:0051649,GO:0051704,GO:0055085,GO:0055114,GO:0061458,GO:0061640,GO:0065002,GO:0070647,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072329,GO:0072594,GO:0072662,GO:0072663,GO:0098588,GO:0098805,GO:0140013,GO:0140056,GO:0140096,GO:1901564,GO:1901575,GO:1903046,GO:1990351,GO:1990415,GO:1990429
Preferred namePEX10
Descriptionperoxisome-chloroplast membrane tethering
COG categoryO
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5574@1|root,KOG0317@2759|Eukaryota
Evalue2.99e-51
Seed ortholog2880.D8LAW2
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionZinc finger, RING/FYVE/PHD-type
Ec32 orthologEc-27_006210.1
TranscriptId353258
TrackFilteredModels1
ProteinId352936
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352936gene_13805Tribonema minus UTEX_B_3156 geneContig_137 207972..209763 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13805_3exon_13805_3Tribonema minus UTEX_B_3156 exonContig_137 207972..208728 -
exon_13805_2exon_13805_2Tribonema minus UTEX_B_3156 exonContig_137 208837..208911 -
exon_13805_1exon_13805_1Tribonema minus UTEX_B_3156 exonContig_137 209465..209763 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_13805UTR3_13805Tribonema minus UTEX_B_3156 three_prime_UTRContig_137 207972..207986 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13805CDS_13805Tribonema minus UTEX_B_3156 CDSContig_137 209465..209763 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352936Trimin1|352936|estExt_Genemark1.C_Ctg_1370026Tribonema minus UTEX_B_3156 polypeptideContig_137 207987..209763 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13805 ID=mRNA_13805|Name=jgi.p|Trimin1|352936|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1131bp|location=Sequence derived from alignment at Contig_137:207972..209763- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGAGAGACACGTACTACGTTGGCGCTCTGGCTGATGGACTGAAGGA
CGTGCTGGAGAGCTGCATGGGAGTTAGGCGAACGTCCATGCTGGCAGCAG
AGCTGAATCTTCTGGCAGGGACTCTGTACCAGGGCCTGACGGTACTGGCT
GGGCGGCAGACCGTCGGCCAGGAGTACTGCGACTTGATGTTCTCCAGGAA
TGGCTTATGCGATGTGCCGCTCAGTGCAAGGGCGGGCTACTCTTTAGTGG
AGGTGTGCTGGCCCTACCTTCTCAGCAGGCTGGACACCGGCTGGCCGCGT
CTGCGAGACATCAGAGAGCCGTTCGACAGGCACGCGGAGGCTGCTCGCAT
CCGCGACGCCATGCGCGCGCACGCTGCAGAATCGGAATCGCAGCAGCCGA
CGTCAGCAGCAGAAGCAGCAGCAGTAACACCAGTAGCACCACCAGACAAC
GACGGAAGCCGCGATGCCGCATACTCTGTGTGCTCAGCAACAGCGGGGGG
CACGAGCTCTGCAGCAGCGAAGGCTCAAGTGGCAGCAACGGCGGCAGCGG
CAGCAGCGGCGCGCGCGCTGCGGCGCGCCTGGGCGGCGGCGGCGCGGCGG
CGGCGCGGCGCAGCGCGCGTGCTGCGGTGGCTGGGCGCCTTCCACCTGGC
CCTCTTCTTCCTGAACGGACGCTATGCGAACGCCGCGATGCGCGCCGCGC
GCGTGCGCCTCATGTACAACCGCGCGCAAGACGCGCCGCTGCCGCGCTAC
ACCATCCTTGGCGTGCTGATGCTTGCGCGCTTCGGCTTCGAGTTCGGCGC
CCAGGCGGCGCGCAAGCTTCACGGAATAATATTCAGCGATGGCGATGGCA
GCGGCGGCGCCGGCGGCGCTGGTAAGGCCAATCTGGCCTCCCAGCGAGTG
CCGGGACTGTCCGGATCGGATACTGAGGCGGCAGCGCGGCGGCACCGCTG
CGCGCTGTGCATGGGTCCCAGGGAGCATACGGCAGCCACGCTGTGCGGTC
ACTTGTTCTGCTGGGAGTGCATAGTGGGGTGGTGCGAGACGAACCCGGAG
TGCCCGCTGTGCAGGCAGCCTGCTGAGCCGCAGAGTATCGTGTGCGTGTA
CCACTATGATGAATGACATATGATGGCGTTG
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protein sequence of jgi.p|Trimin1|352936

>Trimin1|352936|estExt_Genemark1.C_Ctg_1370026 ID=Trimin1|352936|estExt_Genemark1.C_Ctg_1370026|Name=jgi.p|Trimin1|352936|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=372bp
MERDTYYVGALADGLKDVLESCMGVRRTSMLAAELNLLAGTLYQGLTVLA
GRQTVGQEYCDLMFSRNGLCDVPLSARAGYSLVEVCWPYLLSRLDTGWPR
LRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDN
DGSRDAAYSVCSATAGGTSSAAAKAQVAATAAAAAAARALRRAWAAAARR
RRGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRY
TILGVLMLARFGFEFGAQAARKLHGIIFSDGDGSGGAGGAGKANLASQRV
PGLSGSDTEAAARRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPE
CPLCRQPAEPQSIVCVYHYDE*
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mRNA from alignment at Contig_137:207972..209763-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13805 ID=mRNA_13805|Name=jgi.p|Trimin1|352936|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1792bp|location=Sequence derived from alignment at Contig_137:207972..209763- (Tribonema minus UTEX_B_3156 )
ATGGAGAGAGACACGTACTACGTTGGCGCTCTGGCTGATGGACTGAAGGA CGTGCTGGAGAGCTGCATGGGAGTTAGGCGAACGTCCATGCTGGCAGCAG AGCTGAATCTTCTGGCAGGGACTCTGTACCAGGGCCTGACGGTACTGGCT GGGCGGCAGACCGTCGGCCAGGAGTACTGCGACTTGATGTTCTCCAGGAA TGGCTTATGCGATGTGCCGCTCAGTGCAAGGGCGGGCTACTCTTTAGTGG AGGTGTGCTGGCCCTACCTTCTCAGCAGGCTGGACACCGGCTGGCCGCGG TGAGTCTGCGCTGCAAATGACTTCCTTTCAAATTACATGCACCTGTAGCA TTGCTGTGGTCGATGAAGTTGATGCTGCAGTTTTCCAGCATCAACAAGCA AACATCAATCGCGCTCCTGGTCACTGTTATTGTCTGCAGGACGTGCAGTT GCAGCTGCTGGTCCTGCAGCTGCAGTTGATCGGTATCCGGGCGTTGTCAT CGTGGATGCGAAACAGCCTGACTGTGCAGATGAGCACCGAAGTACACGTG CGCCCTCACATTGCAGCCTGCACCTCAGCATCTATTATCATAAGCAACAG CCACTTCGAGATCAGATCAGCTTGGACTTCCAGCGAAGGTCTTGAACTGT GCCGTGACCTCGACATTCAATCAGTTCATGGCCGTGCTTACATAGATGCA CTTGTCTGCAACTCCCACATATGCTTCATTCAACAAAATAATGGACACGG TTGCGTGCCAGCTGATGTGACCGTGCTGGACGCAGAGGCAGCTGCCCCCC CGTGCTTGCCTGACACCACTACCGCGCACCCCATTGTGACCTGCAACTGC AGTCTGCGAGACATCAGAGAGCCGTTCGACAGGCACGCGGAGGCTGCTCG CATCCGCGACGCCATGCGCGCGCACGCGTCCCCCCCTTCCCCCTCCCCTT CCCCTTCACCAACTGCGGCCCAAACATCAACTTCAAGAGTGCCGGCAGAG GGTGATGGCGATGCATCCGCACGCCATCAGCGAAGTGCAGAATCGGAATC GCAGCAGCCGACGTCAGCAGCAGAAGCAGCAGCAGTAACACCAGTAGCAC CACCAGACAACGACGGAAGCCGCGATGCCGCATACTCTGTGTGCTCAGCA ACAGCGGGGGGCACGAGCTCTGCAGCAGCGAAGGCTCAAGTGGCAGCAAC GGCGGCAGCGGCAGCAGCGGCGCGCGCGCTGCGGCGCGCCTGGGCGGCGG CGGCGCGGCGGCGGCGCGGCGCAGCGCGCGTGCTGCGGTGGCTGGGCGCC TTCCACCTGGCCCTCTTCTTCCTGAACGGACGCTATGCGAACGCCGCGAT GCGCGCCGCGCGCGTGCGCCTCATGTACAACCGCGCGCAAGACGCGCCGC TGCCGCGCTACACCATCCTTGGCGTGCTGATGCTTGCGCGCTTCGGCTTC GAGTTCGGCGCCCAGGCGGCGCGCAAGCTTCACGGAATAATATTCAGCGA TGGCGATGGCAGCGGCGGCGCCGGCGGCGCTGGTAAGGCCAATCTGGCCT CCCAGCGAGTGCCGGGACTGTCCGGATCGGATACTGAGGCGGCAGCGCGG CGGCACCGCTGCGCGCTGTGCATGGGTCCCAGGGAGCATACGGCAGCCAC GCTGTGCGGTCACTTGTTCTGCTGGGAGTGCATAGTGGGGTGGTGCGAGA CGAACCCGGAGTGCCCGCTGTGCAGGCAGCCTGCTGAGCCGCAGAGTATC GTGTGCGTGTACCACTATGATGAATGACATATGATGGCGTTG
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Coding sequence (CDS) from alignment at Contig_137:207972..209763-

>mRNA_13805 ID=mRNA_13805|Name=jgi.p|Trimin1|352936|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1116bp|location=Sequence derived from alignment at Contig_137:207972..209763- (Tribonema minus UTEX_B_3156 )
ATGGAGAGAGACACGTACTACGTTGGCGCTCTGGCTGATGGACTGAAGGA
CGTGCTGGAGAGCTGCATGGGAGTTAGGCGAACGTCCATGCTGGCAGCAG
AGCTGAATCTTCTGGCAGGGACTCTGTACCAGGGCCTGACGGTACTGGCT
GGGCGGCAGACCGTCGGCCAGGAGTACTGCGACTTGATGTTCTCCAGGAA
TGGCTTATGCGATGTGCCGCTCAGTGCAAGGGCGGGCTACTCTTTAGTGG
AGGTGTGCTGGCCCTACCTTCTCAGCAGGCTGGACACCGGCTGGCCGCGT
CTGCGAGACATCAGAGAGCCGTTCGACAGGCACGCGGAGGCTGCTCGCAT
CCGCGACGCCATGCGCGCGCACGCTGCAGAATCGGAATCGCAGCAGCCGA
CGTCAGCAGCAGAAGCAGCAGCAGTAACACCAGTAGCACCACCAGACAAC
GACGGAAGCCGCGATGCCGCATACTCTGTGTGCTCAGCAACAGCGGGGGG
CACGAGCTCTGCAGCAGCGAAGGCTCAAGTGGCAGCAACGGCGGCAGCGG
CAGCAGCGGCGCGCGCGCTGCGGCGCGCCTGGGCGGCGGCGGCGCGGCGG
CGGCGCGGCGCAGCGCGCGTGCTGCGGTGGCTGGGCGCCTTCCACCTGGC
CCTCTTCTTCCTGAACGGACGCTATGCGAACGCCGCGATGCGCGCCGCGC
GCGTGCGCCTCATGTACAACCGCGCGCAAGACGCGCCGCTGCCGCGCTAC
ACCATCCTTGGCGTGCTGATGCTTGCGCGCTTCGGCTTCGAGTTCGGCGC
CCAGGCGGCGCGCAAGCTTCACGGAATAATATTCAGCGATGGCGATGGCA
GCGGCGGCGCCGGCGGCGCTGGTAAGGCCAATCTGGCCTCCCAGCGAGTG
CCGGGACTGTCCGGATCGGATACTGAGGCGGCAGCGCGGCGGCACCGCTG
CGCGCTGTGCATGGGTCCCAGGGAGCATACGGCAGCCACGCTGTGCGGTC
ACTTGTTCTGCTGGGAGTGCATAGTGGGGTGGTGCGAGACGAACCCGGAG
TGCCCGCTGTGCAGGCAGCCTGCTGAGCCGCAGAGTATCGTGTGCGTGTA
CCACTATGATGAATGA
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