Trimin1|352892|estExt_Genemark1.C_Ctg_1350028 (polypeptide) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|352892 vs. uniprot
Match: A0A836CLS8_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLS8_9STRA) HSP 1 Score: 773 bits (1996), Expect = 3.230e-282 Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 0 Query: 1 MRKIGSTADFEVVQSMEVAERPPHVPADVRRGETGEWPMLLPMYLYAAHPDTFPSISAAKKAVRRQELLLNDGEANVSARVNPGDRLKRLARTKPATTAALFVKPHLSLPIVYEDDYIAVVVKPPGMPVHGTKMEEGAPPRDKKARGPVPSLRTAIAHCLKPSAATDAVLRRPQHAHRLDGPTGGLMVCAKTRPALQNLSIAFQERRVHKRYRALVTGHLEGSGTISTPLSGKPSETEYSVLDELRVQSLFSGTITTVDLWPKTGRHHQLRKHLASLNVPILGDKRYHPADQAETLLRGEGLFLWALELKFDHPITGEALNLTIEEPEKFTKWREKEQRRWEKLSSVPKKVKLGAEGEAPCGDDVAGGAEEAYQDNSDSDDAEEFEVSDAE 391 MRKIGSTADFEVVQSMEVAERPPHVPADVRRGETGEWPMLLPMYLYAAHPDTFPSISAAKKAVRRQELLLNDGEANVSARVNPGDRLKRLARTKPATTAALFVKPHLSLPIVYEDDYIAVVVKPPGMPVHGTKMEEGAPPRDKKARGPVPSLRTAIAHCLKPSAATDAVLRRPQHAHRLDGPTGGLMVCAKTRPALQNLSIAFQERRVHKRYRALVTGHLEGSGTISTPLSGKPSETEYSVLDELRVQSLFSGTITTVDLWPKTGRHHQLRKHLASLNVPILGDKRYHPADQAETLLRGEGLFLWALELKFDHPITGEALNLTIEEPEKFTKWREKEQRRWEKLSSVPKKVKLGAEGEAPCGDDVAGGAEEAYQDNSDSDDAEEFEVSDAE Sbjct: 1 MRKIGSTADFEVVQSMEVAERPPHVPADVRRGETGEWPMLLPMYLYAAHPDTFPSISAAKKAVRRQELLLNDGEANVSARVNPGDRLKRLARTKPATTAALFVKPHLSLPIVYEDDYIAVVVKPPGMPVHGTKMEEGAPPRDKKARGPVPSLRTAIAHCLKPSAATDAVLRRPQHAHRLDGPTGGLMVCAKTRPALQNLSIAFQERRVHKRYRALVTGHLEGSGTISTPLSGKPSETEYSVLDELRVQSLFSGTITTVDLWPKTGRHHQLRKHLASLNVPILGDKRYHPADQAETLLRGEGLFLWALELKFDHPITGEALNLTIEEPEKFTKWREKEQRRWEKLSSVPKKVKLGAEGEAPCGDDVAGGAEEAYQDNSDSDDAEEFEVSDAE 391
BLAST of jgi.p|Trimin1|352892 vs. uniprot
Match: A0A6H5JPH2_9PHAE (PseudoU_synth_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPH2_9PHAE) HSP 1 Score: 287 bits (735), Expect = 9.290e-90 Identity = 163/339 (48.08%), Postives = 215/339 (63.42%), Query Frame = 0 Query: 5 GSTADFEVVQSMEVAERPPHVPADVRRGETGEWPMLLPMYLYAAHPDTFPSISAAKKAVRRQELLLNDGEANVSARVNPGDRLKRLARTKPATTAALFV--KPHLSLPIVYEDDYIAVVVKPPGMPVHGTKMEEGAPPRDKKARGPVPSLRTAIAHCLKPSAATDAVLRRPQHAHRLDGPTGGLMVCAKTRPALQNLSIAFQERRVHKRYRALVTGHLEGSGTISTPLSGKPSETEYSVLDELRVQSLFSGTITTVDLWPKTGRHHQLRKHLASLNVPILGDKRYHPADQAETLLRGEGLFLWALELKFDHPITGEALNLTIEEPEKFTKWREKEQRRW 341 G+ F+V + V P P ++ GE +PML+ +++A + D FPS+S+A+KAVRR+ELLLN E ++VNPGD + RT+P LF KP +LPI++EDD+IAV++KP G+ VHG E+ P ++ S+R A+ + L P+ + D L RP H HRLD TGGL++CAKTRPAL + AF++R V KRY ALV G LEGSG I TPL GK T Y V V+SL + ITTVDLWP TGR HQLR+HL+S+ PILGD+RY P E + G++L A+ L F HPIT E +N +I EP KF KWREKE +RW Sbjct: 62 GTRRGFQVQKEYAV---PDEAPTNLPEGEDEGYPMLIYQFMHAQYRDDFPSVSSARKAVRRKELLLNGTEVRNDSKVNPGDTVTMQKRTQPG----LFPQGKPSCTLPILWEDDFIAVIIKPAGVAVHGGTGEDDPGPGGRR------SVRQALPYMLTPTKSKDRPLHRPLHCHRLDKATGGLLICAKTRPALSAIGDAFEQRLVSKRYVALVAGELEGSGAIVTPLDGKACVTNYRVRGP-PVRSLKTSVITTVDLWPVTGRLHQLRRHLSSIGCPILGDRRYTPD---EVPFQEGGMYLQAVGLTFPHPITREEMNFSIPEPAKFEKWREKEHQRW 383
BLAST of jgi.p|Trimin1|352892 vs. uniprot
Match: A0A7S3UCU8_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UCU8_9CHLO) HSP 1 Score: 205 bits (521), Expect = 1.020e-59 Identity = 120/292 (41.10%), Postives = 170/292 (58.22%), Query Frame = 0 Query: 41 LPMYLYAAHPDTFPSISAAKKAVRRQELLLNDGEANVSARVNPGDRLKRLARTKPATTAALFVKPHLS--LPIVYEDDYIAVVVKPPGMPVHGTKMEEGAPPRDKKARGPVPSLRTAIAHCLKPSAATDAVLRRPQHAHRLDGPTGGLMVCAKTRPALQNLSIAFQERRVHKRYRALVTGHLEGSGTISTPLSGKPSETEYSVLDELRVQSLFSGTITTVDLWPKTGRHHQLRKHLASLNVPILGDKRYHPADQAETLLRGEGLFLWALELKFDHPITGEALNLTIEEPEKF 330 +P L AA PD F +++AA+KA RR E+L+ RV GD ++ + R+ A +P + + + YEDD++AV+VKP G+ V G RG +L+ + + L+P A L RP H HRLD PTGGL++ AKT+ +++ + I F ER+V KRYRA+V G LEG GTI PL G+ ++T Y + + RV + G T VD+WP TGR+HQ+R+HLAS+ PI+GD Y P + ++ GLFLWA E+ F HPITG + L E P F Sbjct: 29 MPQALLAAMPDRFETMTAARKACRRCEILVEGETTRCGDRVKIGDTIRWIRRSSNAPRPMCRPEPPETKLVEVAYEDDHLAVLVKPRGLAVQG--------------RGKT-TLQQLLPYLLQP-AHVQGALHRPHHVHRLDMPTGGLLIAAKTQASIREMGILFHERQVQKRYRAVVIGCLEGEGTIDRPLRGQEAQTTYRAVKQQRVGN-GHGWRTIVDVWPATGRYHQIRRHLASIGHPIVGDDEYCPRQRHDS---SNGLFLWAAEVVFPHPITGRTVALVSEPPPCF 300
BLAST of jgi.p|Trimin1|352892 vs. uniprot
Match: A0A7S2RLL2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLL2_9STRA) HSP 1 Score: 196 bits (498), Expect = 2.140e-56 Identity = 113/235 (48.09%), Postives = 146/235 (62.13%), Query Frame = 0 Query: 111 IVYEDDYIAVVVKPPGMPVHGTKMEEGAPPRDKKARGPVPSLRTAIAHCLKPSAATDAVLRRPQHAHRLDGPTGGLMVCAKTRPALQNLSIAFQERRVHKRYRALVTGHLEGSGTISTPLSGKPSETEYSVLDELRVQSLFSGTITTVDLWPKTGRHHQLRKHLASLNVPILGDKRYHPADQAETLLRGEGLFLWALELKFDHPITGEALNLTIEEPEKFTKWREKEQRRWEKLS 345 +VYEDD +AVVVKP GMP HG + E A SL+TAI + L+P+ +TD LRRP+H HRLD T GL++ AKTRPAL+ L+ F ERR+ K+YRA+V G L G G I P+ G + T + V+SL G +T V+L P TGR HQLRKHLA L PI+GD RY A E L RG G+ L A+ L F HPI+G+ + + EP KF K+ ++E RW L+ Sbjct: 41 VVYEDDVMAVVVKPQGMPTHGNRGGEDAGATASLGA----SLKTAILYSLQPTPSTDEPLRRPEHCHRLDAATFGLVLVAKTRPALRRLTADFAERRIRKQYRAVVHGKLIGEGVIEEPVDGTAAVTHWE--SARTVRSLRWGWLTQVELRPLTGRRHQLRKHLAFLGHPIVGDARY--AKDPEQLHRGIGMLLAAVALDFTHPISGKPQQIEVSEPPKFGKFLDREDERWHSLA 267
BLAST of jgi.p|Trimin1|352892 vs. uniprot
Match: A0A7S4C3Z6_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C3Z6_CHRCT) HSP 1 Score: 191 bits (486), Expect = 7.170e-54 Identity = 130/312 (41.67%), Postives = 178/312 (57.05%), Query Frame = 0 Query: 27 ADVRRGETGEWPMLLPMYLYAAHPDTFPSISAAKKAVRRQELLLNDGEANVSARVNPGDRLKRLARTK-PATTAALFVKPHLSLPIVYEDDYIAVVVKPPGMPVHGTKMEEGAPPRDKKARGPVPSLRTAIAHCLKPSAATDAVLRRPQHAHRLDGPTGGLMVCAKTRPALQNLSIAFQERRVHKRYRALVTGHL---EGSG--TISTPLSGKPSETEYSVLDELRVQSLFSGTITTVDLWPKTGRHHQLRKHLASLNVPILGDKRYHPADQAETLLRGEGLFLWALELKFDHPITGEALNLTIEEPEKFTK 332 A+VR G+T P+ LP + PD FPS SAAK+A RR +L+N V L+ +AR PA + L IVYEDD +AVV KP G+PV G+ +EG ++RT +A+ L+PS + L RPQH HRLD PT GL+V AK+RPA+ L AF +R+V K YRA+V G + EG+ + TP+SG+ + TE+ V+ R S G ++ V+L P TGR HQLR+H+ASL PI+GD +Y P E GL L A+ L HP+TG+ L+L+++EP F K Sbjct: 59 AEVRIGDT---PLALPALVQRTWPDHFPSSSAAKRACRRSLVLVNGEIGACGNHVGSNAVLELIARASAPAPGQGRRSTGSVPLRIVYEDDDMAVVYKPAGIPVAGS--QEGRL-----------NVRTMLAYSLQPSQNAEP-LWRPQHVHRLDAPTSGLLVVAKSRPAISALHEAFAQRQVRKTYRAVVAGQIAPHEGTDLRVVETPVSGQSARTEWRVVR--RFASASYGELSLVELHPHTGRTHQLRRHMASLGHPIVGDDKYWPRHMPEHT--EHGLCLSAVGLALPHPLTGKVLSLSVDEPASFRK 349
BLAST of jgi.p|Trimin1|352892 vs. uniprot
Match: A0A2N1RPP9_9SPIR (RNA pseudouridine synthase n=1 Tax=Spirochaetae bacterium HGW-Spirochaetae-5 TaxID=2013837 RepID=A0A2N1RPP9_9SPIR) HSP 1 Score: 189 bits (480), Expect = 1.130e-53 Identity = 120/292 (41.10%), Postives = 167/292 (57.19%), Query Frame = 0 Query: 55 SISAAKKAVRRQELLLNDGEANVSARVNPGDRLKRLARTKPATTAALFVKPHLSLPIVYEDDYIAVVVKPPGMPVHGTKMEEGAPPRDKKARGPVPSLRTAIAHCLKPSAATDAVLRRPQHAHRLDGPTGGLMVCAKTRPALQNLSIAFQERRVHKRYRALVTGHLEGSGTISTPLSGKPSETEYSVLDELRVQSLFSGTITTVDLWPKTGRHHQLRKHLASLNVPILGDKRY-HPADQAETLLRGEGLFLWALELKFDHPITGEALNLTIEEPEKFTKWREKEQRRWEKLS 345 S + KKA++R + L++ A + PG + T L V H+ +P+VYEDD+IAVV KP G+ V G + + ++ A+ LK S DA L RP HRLD T GL++ AKTR A NL F+ R++ KRYRA+V G + G I + + G+ SET+Y + VQS+ +G +T VDL+P TGR HQLR+H+A PI+GDK Y P D L RG+GLFL A+EL DHP G LNL I++PEKF + ++E+RRW +L+ Sbjct: 42 SRNGIKKAIKRGDFLIDGVSAETGTWIKPGQII-----TLNEQEIELPVY-HMVIPVVYEDDHIAVVNKPAGITVSGNRFK---------------TVENALPFNLKKSMEDDA-LGRPGPVHRLDSQTSGLLLIAKTRRARINLGHQFESRKIKKRYRAVVKGEIRNPGRIISDIDGRSSETDYIPVKS--VQSIKNGYVTLVDLFPGTGRTHQLRRHMAESGHPIIGDKLYGEPGD----LFRGKGLFLAAVELTLDHPCDGVYLNLRIDDPEKFGSFMDREERRWYRLN 305
BLAST of jgi.p|Trimin1|352892 vs. uniprot
Match: A0A7S4BPC4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BPC4_CHRCT) HSP 1 Score: 190 bits (483), Expect = 3.390e-53 Identity = 131/310 (42.26%), Postives = 175/310 (56.45%), Query Frame = 0 Query: 41 LPMYLYAAHPDTFPSISAAKKAVRRQELLLNDGEANVSARVNPGDRLKRLARTKPATTAALFVKPHLSLPIVYEDDYIAVVVKPPGMPVHGTKMEEGAPPRDKKARGPVPSLRTAIAHCLKPSAA-TDAVLRRPQHAHRLDGPTGGLMVCAKTRPALQNLSIAFQERRVHKRYRALVTGHLEG-SGTISTPLSGKPSETEYSVLDELRVQSLFSGTITTVDLWPKTGRHHQLRKHLAS-LNVPILGDKRYHPADQAETLLRGEGLFLWALELKFDHPITGEA---LNLTIEEPEKFTKWREKEQRRWEKL 344 LP L + + FPS+S A+K+ RR +L+N E + V PGD ++ R T KP S+ +++E D +AVV KPPG+ H PP R S+RTA+ + + P A+ T L RP HRLD T GL++CAKT+PAL +LS AF +RRV KRY A+V G++EG SG I PL GK + T + V R +SL G +TT+ L+P TGR HQLR+H A LN PILGD +Y E + G G+FL A+ L F HP E L++ I P KF +EQ RWE+L Sbjct: 93 LPQALTLLNAELFPSMSRARKSCRRGSVLINGKEGRCISTVCPGDVIELQTRVNAGYTPR--GKPPFSVEVIWECDQLAVVNKPPGVVSH-------PPPGGAAGRQ---SMRTAVQYAVAPPASGTPGALYRPHLVHRLDKGTSGLLLCAKTKPALVSLSSAFAQRRVSKRYVAVVVGYVEGESGKIDAPLDGKEAVTRWEVA--ARHRSLRLGHLTTLHLYPTTGRTHQLRRHCAEELNSPILGDSKYG----GECV--GSGMFLAAVSLTFQHPARPETDPPLSVEIPWPSKFVAVCSREQERWERL 382
BLAST of jgi.p|Trimin1|352892 vs. uniprot
Match: A0A6U4II29_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4II29_9STRA) HSP 1 Score: 191 bits (484), Expect = 4.040e-53 Identity = 123/321 (38.32%), Postives = 177/321 (55.14%), Query Frame = 0 Query: 53 FPSISAAKKAVRRQELLLNDGEANVSARVNPGDRLKRLARTKPATTAALFVKPHLSLPIVYEDDYIAVVVKPPGMPVHGTKMEEGAPPRDKK--ARGPVPSLRTAIAHCLKPSAATDAVLRRPQHAHRLDGPTGGLMVCAKTRPALQNLSIAFQERRVHKRYRALVTGH---LEGSG----------------TISTPLSGKPSETEYSVLDELRVQSLFSGTITTVDLWPKTGRHHQLRKHLAS-LNVPILGDKRYHPADQAET----LLRGEGLFLWALELKFDHPITGEALNLTIEEPEKFTKWREKEQRRWEKLSSV 347 FPS +AAK+ VRR+++ +N + V GD ++RL R + ++YED+++A + KP G+PVH +G+ + K A P S+RT + L P+ A LRRP H HRLD T G+++ AKT+ A++ LS AF +R V KRYRA++ G L G G IS P+ G+ S TE+ ++ R SL G +TTVD+WP+TGR HQLR+H A L PILGD +Y + + G GLFL A+EL+ HP++G+ L + + EP KFTK RE+E RR+ L+ Sbjct: 80 FPSATAAKRLVRRRQIRVNGNVVGTTTNVAAGDFVQRLERLGAGLRPLQRSDVPDGMTVLYEDEHLAAIYKPAGIPVHSGGGGDGSSGEEAKTTAYAPKKSVRTFLPSLLAPTEEVGA-LRRPIHVHRLDAATSGVLLAAKTQTAVRELSRAFADRNVRKRYRAVLIGVPAVLGGDGGFNATAAAAVDSSEPHVISAPVDGRASVTEWRAVNITR--SLRFGYLTTVDMWPRTGRKHQLRRHAAEVLGCPILGDTKYERIPHGDEGNFGISHGMGLFLCAVELRLAHPLSGQDLCIAVGEPPKFTKTREREHRRFLDLADA 397
BLAST of jgi.p|Trimin1|352892 vs. uniprot
Match: A0A3M1YYZ1_9BACT (RluA family pseudouridine synthase (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1YYZ1_9BACT) HSP 1 Score: 186 bits (473), Expect = 5.900e-53 Identity = 113/279 (40.50%), Postives = 159/279 (56.99%), Query Frame = 0 Query: 52 TFPSISAAKKAVRRQELLLNDGEANVSARVNPGDRLKRLARTKPATTAALFVKPHLSLPIVYEDDYIAVVVKPPGMPVHGTKMEEGAPPRDKKARGPVPSLRTAIAHCLKPSAATDAVLRRPQHAHRLDGPTGGLMVCAKTRPALQNLSIAFQERRVHKRYRALVTGHLEGSGTISTPLSGKPSETEYSVLDELRVQSLFSGTITTVDLWPKTGRHHQLRKHLASLNVPILGDKRYHPADQAETLLRGEGLFLWALELKFDHPITGEALNLTIEEPEKF 330 + PS KKA++R ++ ++ A V PG +++ +A P H++LP+VYED+++AVV KP G+ V G K +L+ A+ L PS DA L++ HRLD PT GL++ AKT A NL AF+ + V KRYRA+ G + SG + +P+ GKP+ T + + +R SL +G ++TVDL+P+TGR HQLR HLA PILGDK Y P +L+G+GLFL A+EL F HP +GE L L I P KF Sbjct: 28 SIPSRKGLKKAIKRGQVWVDGAPAETGRWVVPGQKIELIAPDLPPPRIY-----HMALPVVYEDEHLAVVNKPGGISVSGNKFR---------------TLQNALPAHLTPSTRPDA-LKKMLPVHRLDAPTCGLLLVAKTISARINLGQAFENQTVKKRYRAVTIGEMPASGVLDSPIDGKPARTRFERVSAVR--SLKNGWLSTVDLFPETGRTHQLRIHLAQAGYPILGDKLYGPEG---LILKGKGLFLCAVELAFLHPFSGEMLRLAIAPPPKF 280
BLAST of jgi.p|Trimin1|352892 vs. uniprot
Match: A0A6C2UQI1_9BACT (Ribosomal large subunit pseudouridine synthase D n=1 Tax=Pontiella sulfatireligans TaxID=2750658 RepID=A0A6C2UQI1_9BACT) HSP 1 Score: 184 bits (467), Expect = 7.010e-52 Identity = 122/303 (40.26%), Postives = 170/303 (56.11%), Query Frame = 0 Query: 44 YLYAAHPDTFPSISAAKKAVRRQELLLNDGEANVSARVNPGDRLKR--LARTKPATTAALFVKPHLSLPIVYEDDYIAVVVKPPGMPVHGTKMEEGAPPRDKKARGPVPSLRTAIAHCLKPSAATDAVLRRPQHAHRLDGPTGGLMVCAKTRPALQNLSIAFQERRVHKRYRALVTGHLEGSGTISTPLSGKPSETEYSVLDELRVQSLFSGTITTVDLWPKTGRHHQLRKHLASLNVPILGDKRYHPADQAETLLRGEGLFLWALELKFDHPITGEALNLTIEEPEKFTKWREKEQRRWEKL 344 Y A P + PS A KAV+R E+L++ G V G L+ L + P T L L +V+EDD++A++ KPPG+ V G K + ++ A+ L S+A DA L P+ HRLD T GL++ AKT A L F+ER+VHKRY A+V G +E SG I P+ G P+ + Y V + V SL SG +T VDL+P TGR HQLR H+AS+N PI+GD++Y A +L+G+GLFL ++EL+F HP + E L ++I+ P KF +EQ RW K Sbjct: 21 YAQTAFP-SIPSRKGAAKAVKRGEILMDGGVGQSGDWVQTGQLLELVDLQQRVPKTY-------RLPLEVVFEDDHLAIINKPPGIEVSGNKFK---------------TVENALCGSLASSSAADA-LPWPRPVHRLDYSTSGLLLAAKTAGAQVFLGRQFEERQVHKRYCAVVAGRMEASGEIDEPVDGLPALSTYVVHET--VPSLRSGHLTLVDLFPSTGRTHQLRIHMASINHPIVGDQKYGTAGN---VLKGKGLFLASIELRFVHPASQEKLAISIDAPPKFDSLLRREQARWAKF 294 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352892 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Trimin1|352892|estExt_Genemark1.C_Ctg_1350028 ID=Trimin1|352892|estExt_Genemark1.C_Ctg_1350028|Name=jgi.p|Trimin1|352892|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=392bpback to top |