Trimin1|352841|estExt_Genemark1.C_Ctg_1330052 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352841
Unique NameTrimin1|352841|estExt_Genemark1.C_Ctg_1330052
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length193
Homology
BLAST of jgi.p|Trimin1|352841 vs. uniprot
Match: A0A836CLX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLX3_9STRA)

HSP 1 Score: 387 bits (994), Expect = 3.690e-136
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0
Query:    1 MAVPNPRASYPEEAIVSVPDGLEARWLTTLWETDEEIKKLIEEAKQTKFVKGIADGTLDPQAFAIYTLQDASYLASALPIGSAIKLGRAVTDYISFKTSVLAHFKDKPYYYALANYACFRLWPDMSSYLQKELGDSWEKSVSQGWIRENAPSAPPELGPPEHLADLIEACKITDAGEFDEETATGIVSCSHF 192
            MAVPNPRASYPEEAIVSVPDGLEARWLTTLWETDEEIKKLIEEAKQTKFVKGIADGTLDPQAFAIYTLQDASYLASALPIGSAIKLGRAVTDYISFKTSVLAHFKDKPYYYALANYACFRLWPDMSSYLQKELGDSWEKSVSQGWIRENAPSAPPELGPPEHLADLIEACKITDAGEFDEETATGIVSCSHF
Sbjct:    1 MAVPNPRASYPEEAIVSVPDGLEARWLTTLWETDEEIKKLIEEAKQTKFVKGIADGTLDPQAFAIYTLQDASYLASALPIGSAIKLGRAVTDYISFKTSVLAHFKDKPYYYALANYACFRLWPDMSSYLQKELGDSWEKSVSQGWIRENAPSAPPELGPPEHLADLIEACKITDAGEFDEETATGIVSCSHF 192          
BLAST of jgi.p|Trimin1|352841 vs. uniprot
Match: A0A835XKE3_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XKE3_9CHLO)

HSP 1 Score: 103 bits (256), Expect = 1.330e-23
Identity = 68/195 (34.87%), Postives = 103/195 (52.82%), Query Frame = 0
Query:    1 MAVPNPRASYPEEAIVSV-PDGLEARWLTTLWETDEEIKKLIEEAKQTKFVKGIADGTLDPQAFAIYTLQDASYLASALPIGSAI----------------------------------------KLGRAVTDYISFKTSVLAHFKDKPYYYALANYACFRLWPDMSSYLQKEL----GDSWEKSVSQGWIRENA 150
            +A  +PRA +P+ A   V P      +   LW++ E  ++L + AK++ F+KGIA+ TLDP+ + +Y LQDA+YL+SA     AI                                        +L  A  DYI F+ S++   KDKP+Y+ LANY C+RLWP+MS+YL+  L    GD ++KS+ +GWI +N+
Sbjct:    8 LAAASPRAHWPDGAAEPVQPKAGTKLFAEELWDSAEAQEQL-KLAKESAFIKGIAENTLDPRLYGVYQLQDAAYLSSAQECFQAITTNPGNSKDLQDYYALKAISYQGYSRDMKHLWHINSLETVRLSPAAYDYIRFEGSMVTSLKDKPWYFLLANYPCYRLWPEMSAYLKTTLNATLGD-YQKSIYKGWIDDNS 200          
BLAST of jgi.p|Trimin1|352841 vs. uniprot
Match: D8TNA3_VOLCA (TENA_THI-4 domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TNA3_VOLCA)

HSP 1 Score: 69.3 bits (168), Expect = 6.160e-11
Identity = 42/101 (41.58%), Postives = 59/101 (58.42%), Query Frame = 0
Query:   83 AIKLGRAVTDYISFKTSVLAHFKDKPYYYALANYACFRLWPDMSSYLQKELGDSWEKSVSQGWIRENAPSAPPELGPPEHLADLIEACKITDAGEFDEETA 183
            AI+L  A  DYI+F+ SV+ +  DKP Y+ALANY C+RLWP+M  YL +EL  +   +V Q WI  N      +    E LA+L+E+       +F+ E A
Sbjct:  128 AIRLSPAARDYIAFEKSVVTNDADKPIYFALANYPCYRLWPEMCEYLIQELAGT--PTVYQTWIDYNK-----DFRSAEKLANLLES----QCSDFEWERA 217          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352841 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A836CLX3_9STRA3.690e-136100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835XKE3_9CHLO1.330e-2334.87Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
D8TNA3_VOLCA6.160e-1141.58TENA_THI-4 domain-containing protein n=1 Tax=Volvo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016084Haem oxygenase-like, multi-helicalGENE3D1.20.910.10coord: 18..80
e-value: 5.5E-9
score: 37.8
IPR016084Haem oxygenase-like, multi-helicalSUPERFAMILY48613Heme oxygenase-likecoord: 45..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_133contigContig_133:361213..362649 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352841mRNA_14061Tribonema minus UTEX_B_3156 mRNAContig_133 361213..362649 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352841|estExt_Genemark1.C_Ctg_1330052 ID=Trimin1|352841|estExt_Genemark1.C_Ctg_1330052|Name=jgi.p|Trimin1|352841|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=193bp
MAVPNPRASYPEEAIVSVPDGLEARWLTTLWETDEEIKKLIEEAKQTKFV
KGIADGTLDPQAFAIYTLQDASYLASALPIGSAIKLGRAVTDYISFKTSV
LAHFKDKPYYYALANYACFRLWPDMSSYLQKELGDSWEKSVSQGWIRENA
PSAPPELGPPEHLADLIEACKITDAGEFDEETATGIVSCSHF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016084Haem_Oase-like_multi-hlx