Trimin1|352829|estExt_Genemark1.C_Ctg_1330035 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352829
Unique NameTrimin1|352829|estExt_Genemark1.C_Ctg_1330035
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length765
Homology
BLAST of jgi.p|Trimin1|352829 vs. uniprot
Match: A0A835ZF00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF00_9STRA)

HSP 1 Score: 1125 bits (2910), Expect = 0.000e+0
Identity = 764/764 (100.00%), Postives = 764/764 (100.00%), Query Frame = 0
Query:    1 MMYGSASLAVLAVILAGASAFAPSSFAGRAVASRPVVSRRHELRASLEDLEARIAQREAEAAAKNKKAAPAPAAPAAKGSLFKAQSPKPAXXXXXXAAKPAPVAXXXXXXXXXXXXXXXXXVVKPTPPAPVAPKAVAPPAATSGASGTDVAAGVGLGVLPWLAAPVVALGAVRPLLAKGTAAREAVQKAAEAEAAAKAKALAESKLDKAGLTEADKKTLTAVLAVAAISLGGILVLPAISTKSESSAPAVVAPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAPKPXXXXXEAPKXXXXXXXXXXXXXXEKVEPVVEKVVEKVAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPAXXXXXVAPTVDTGAPAGKGRVLEAETVDPAFLQSLKKAKAAKHKKREQPKISCEASATAPSSDCSKGGWSDYWFAEQLLRSAWPVRIVSDVLLSTLASASPLLASVVVGAAVCVSCAAAGEHWQQAARVTVEVAILRYLHCLPCGLGVAAELREHTCARQLQPLAGAALHYAGQRGCAVAVAAAARRVRLNLFEANALLLGASHVGNACAGSRLWCLDLGGGSDDAVGYQLRGFFCRTRGVFAARRVLSLPFDCVDTVLGCQGILSATERELACTTSAVGEAFRAWAGAPLSVLDAHSLGTLGARNLKGMGLVAAPVRLFARPFMSLGWTHGTSSICMVGDPICGSFLAKLLDPTCCLLPGSGHIYSKYLTSWAAATAGSLGA 764
            MMYGSASLAVLAVILAGASAFAPSSFAGRAVASRPVVSRRHELRASLEDLEARIAQREAEAAAKNKKAAPAPAAPAAKGSLFKAQSPKPAXXXXXXAAKPAPVAXXXXXXXXXXXXXXXXXVVKPTPPAPVAPKAVAPPAATSGASGTDVAAGVGLGVLPWLAAPVVALGAVRPLLAKGTAAREAVQKAAEAEAAAKAKALAESKLDKAGLTEADKKTLTAVLAVAAISLGGILVLPAISTKSESSAPAVVAPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAPKPXXXXXEAPKXXXXXXXXXXXXXXEKVEPVVEKVVEKVAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPAXXXXXVAPTVDTGAPAGKGRVLEAETVDPAFLQSLKKAKAAKHKKREQPKISCEASATAPSSDCSKGGWSDYWFAEQLLRSAWPVRIVSDVLLSTLASASPLLASVVVGAAVCVSCAAAGEHWQQAARVTVEVAILRYLHCLPCGLGVAAELREHTCARQLQPLAGAALHYAGQRGCAVAVAAAARRVRLNLFEANALLLGASHVGNACAGSRLWCLDLGGGSDDAVGYQLRGFFCRTRGVFAARRVLSLPFDCVDTVLGCQGILSATERELACTTSAVGEAFRAWAGAPLSVLDAHSLGTLGARNLKGMGLVAAPVRLFARPFMSLGWTHGTSSICMVGDPICGSFLAKLLDPTCCLLPGSGHIYSKYLTSWAAATAGSLGA
Sbjct:    1 MMYGSASLAVLAVILAGASAFAPSSFAGRAVASRPVVSRRHELRASLEDLEARIAQREAEAAAKNKKAAPAPAAPAAKGSLFKAQSPKPAXXXXXXAAKPAPVAXXXXXXXXXXXXXXXXXVVKPTPPAPVAPKAVAPPAATSGASGTDVAAGVGLGVLPWLAAPVVALGAVRPLLAKGTAAREAVQKAAEAEAAAKAKALAESKLDKAGLTEADKKTLTAVLAVAAISLGGILVLPAISTKSESSAPAVVAPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAPKPXXXXXEAPKXXXXXXXXXXXXXXEKVEPVVEKVVEKVAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPAXXXXXVAPTVDTGAPAGKGRVLEAETVDPAFLQSLKKAKAAKHKKREQPKISCEASATAPSSDCSKGGWSDYWFAEQLLRSAWPVRIVSDVLLSTLASASPLLASVVVGAAVCVSCAAAGEHWQQAARVTVEVAILRYLHCLPCGLGVAAELREHTCARQLQPLAGAALHYAGQRGCAVAVAAAARRVRLNLFEANALLLGASHVGNACAGSRLWCLDLGGGSDDAVGYQLRGFFCRTRGVFAARRVLSLPFDCVDTVLGCQGILSATERELACTTSAVGEAFRAWAGAPLSVLDAHSLGTLGARNLKGMGLVAAPVRLFARPFMSLGWTHGTSSICMVGDPICGSFLAKLLDPTCCLLPGSGHIYSKYLTSWAAATAGSLGA 764          
BLAST of jgi.p|Trimin1|352829 vs. uniprot
Match: D8LGY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY1_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 5.230e-70
Identity = 144/293 (49.15%), Postives = 179/293 (61.09%), Query Frame = 0
Query:  472 VLLSTLASASPLLASVVVGAAVCVSCA----AAGEHWQQAARVTVEVAILRYLHCLPCGLGVAAELREHTCARQLQPLAGAALHYAGQRGCAVAVAAAARRVRLNLFEANALLLGASHVGNACAGSRL---------WCLDLGGGSDDAVGYQLRGFFCRTRGVFAARRVLSLPFDCVDTVLGCQGILSATERELACTTSAVGEAFRAWAGAPLSVLDAHSLGTLGARNLKGMGLVAAPVRLFARPFMSLGWTHGTSSICMVGDPICGSFLAKLLDPTCCLLPGSGHIYSKYL 751
            V+   LAS+  ++A  VVG AV  SCA     A + W+Q AR+T+EVAI+ Y H LP GLG    LR +    +   L GA  H+ GQ      VAA+ R V LN+ EAN +LLG SH+GN  AGSR+                   +A  YQLRGFF RT G+F  R +LS+PFD  DT+L  QGILSATERE+      +  AFR +A    + LDAHSLG +GARNL GMG +AA VR+F RP +SLGWT   +++CM GDPICGS L KLLDPTC +L G GH Y  Y+
Sbjct:  269 VVAGALASSHSVVAGFVVGLAVWASCAKRLTGAEDDWKQVARITIEVAIMWYCHALPHGLGAGRPLRGNFGTGKAGDLLGAMWHFLGQGTFIRLVAASGRVVSLNVLEANGILLGLSHLGNGLAGSRMRRVVGATAXXXXXXXXXXXEAHAYQLRGFFSRTNGIFGERPILSMPFDTADTLLALQGILSATEREVVQKNGVLASAFRDFAAQSANTLDAHSLGAVGARNLMGMGFIAARVRMFGRPALSLGWTEKATNMCMEGDPICGSLLQKLLDPTCVMLKGRGHFYDAYV 561          
BLAST of jgi.p|Trimin1|352829 vs. uniprot
Match: A0A835ZCF2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCF2_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 5.260e-16
Identity = 63/112 (56.25%), Postives = 70/112 (62.50%), Query Frame = 0
Query:  140 AATSGASGTDVAAGVGLGVLPWLAAPVVALGAVRPLLAKGTAAREAVQKAAEAEAAAKAKALAESKLDKAGLTEADKKTLTAVLAVAAISLGGILVLPAISTKSESSAPAVV 251
            AA  G SG  VAAGVGLG+LPWLAAP+VALGAVRP+LAKG A                            GLTEADKKTLTAVLAVAA+SLGGI   P +S   +S+ PAVV
Sbjct:   59 AADDGVSGPQVAAGVGLGLLPWLAAPLVALGAVRPILAKGAAXXXXXXXXXXXXXXXXXXXXXXXXDAAGGLTEADKKTLTAVLAVAALSLGGIFAQPLLSGGEKSAPPAVV 170          
BLAST of jgi.p|Trimin1|352829 vs. uniprot
Match: D8LTE0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTE0_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 2.790e-11
Identity = 53/108 (49.07%), Postives = 72/108 (66.67%), Query Frame = 0
Query:  149 DVAAGVGLGVLPWLAAPVVALGAVRPLLAKGTAAREAVQKAAEAEAAAKAKALAES-KLDKAGLTEADKKTLTAVLAVAAISLGGILVLPAISTKSESSAPAVVAPKV 255
            +VA GV LG LPW+ APVVAL A+RP+++KG AAR+A QKA   E A  A+A A + K++  GLT +D+  + A+ AVAA+ LGG+LV P  +    +S PA   P V
Sbjct:  138 EVAEGVALGALPWVVAPVVALAALRPVISKGVAARDAEQKAKAIEEAKAAEAAARAAKME--GLTASDEGAVKALSAVAAVCLGGLLVQPLFAPPDLASLPAKPTPTV 243          
BLAST of jgi.p|Trimin1|352829 vs. uniprot
Match: L1I930_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I930_GUITC)

HSP 1 Score: 70.5 bits (171), Expect = 6.250e-9
Identity = 89/274 (32.48%), Postives = 118/274 (43.07%), Query Frame = 0
Query:  513 EVAILRYLHCLPCGLGVAAELREHTCARQLQPLAGAALHYAGQRGCAVAVAAAARRVRLNLFEANALLLGASHVGNACAGSR------------LWCLDLG----GGSDDAVGYQLRGFFCRTRG--VFAARRVLSLPFDCVDTVLGCQGILSATERELACTTSAVGEAFRAWAGAPLSVLDAHSLGTLGARNLKGMGLVAAPVRLFARPFMSLGWTHGTSSICMVGDPICGSFLAKLLD--PTCCLLPGSG----HIYSKY------LTSWAA 756
            E A++  L  + C   V  E RE      +  + G  L   GQ      V+  +  +R++L   N  LL  S VG   AG R            ++C  LG    GG D+     L   F R     + A   +L +PF+ VD++LG QGILSA+ R  A     V +A R  A      L+ HSLGTL AR +K     A PV L A PF   GW  G  ++C   DP+C    A +L        +PG G    H   +Y      LTSW A
Sbjct:  197 EAALMGLLEHVDCP--VEKERRE----LDVDAICGRTLRLCGQDAVRSLVSQLSGSLRVSLGLLNTALLCLSFVGVKVAGGRYTVTETSVNVNGMFCQGLGEVGGGGHDNP----LPSIFGRRDDDEMCALHALLDVPFNLVDSLLGMQGILSASGR-CAVKDELVIQAARRGAR-----LEGHSLGTLDARLMKASMGWAGPVVLLAPPFPG-GWEAGVQTVCAHSDPVCFGPAAPVLGLAKEVHRIPGRGIGIVHSRRRYKDYLRSLTSWDA 453          
BLAST of jgi.p|Trimin1|352829 vs. uniprot
Match: A0A7S4PI11_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PI11_GUITH)

HSP 1 Score: 64.7 bits (156), Expect = 3.790e-8
Identity = 56/145 (38.62%), Postives = 71/145 (48.97%), Query Frame = 0
Query:  624 AARRVLSLPFDCVDTVLGCQGILSATERELACTTSAVGEAFRAWAGAPLSVLDAHSLGTLGARNLKGMGLVAAPVRLFARPFMSLGWTHGTSSICMVGDPICGSFLAKLLD--PTCCLLPGSG----HIYSKY------LTSWAA 756
            A   +L +PF+ VD++LG QGILSA+ R  A     V +A R  A      L+ HSLGTL AR +K     A PV L A PF   GW  G  ++C   DP+C    A +L        +PG G    H   +Y      LTSW A
Sbjct:   21 ALHALLDVPFNLVDSLLGMQGILSASGR-CAGKDELVIQAARRGAR-----LEGHSLGTLDARLMKASMGWAGPVVLLAPPFPG-GWEAGVQTVCAHSDPVCFGPAAPVLGLAKEVHRIPGRGIGIVHSRRRYKDFLRSLTSWDA 158          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352829 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A835ZF00_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LGY1_ECTSI5.230e-7049.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZCF2_9STRA5.260e-1656.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LTE0_ECTSI2.790e-1149.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
L1I930_GUITC6.250e-932.48Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S4PI11_GUITH3.790e-838.62Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 40..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..106
NoneNo IPR availablePANTHERPTHR48148KERATINOCYTE PROLINE-RICH PROTEINcoord: 28..386

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_133contigContig_133:217515..226971 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352829mRNA_14043Tribonema minus UTEX_B_3156 mRNAContig_133 217509..226971 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352829|estExt_Genemark1.C_Ctg_1330035 ID=Trimin1|352829|estExt_Genemark1.C_Ctg_1330035|Name=jgi.p|Trimin1|352829|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=765bp
MMYGSASLAVLAVILAGASAFAPSSFAGRAVASRPVVSRRHELRASLEDL
EARIAQREAEAAAKNKKAAPAPAAPAAKGSLFKAQSPKPAAPAPKPAAKP
APVAAPKAAAPAPKAAAPAAPVVKPTPPAPVAPKAVAPPAATSGASGTDV
AAGVGLGVLPWLAAPVVALGAVRPLLAKGTAAREAVQKAAEAEAAAKAKA
LAESKLDKAGLTEADKKTLTAVLAVAAISLGGILVLPAISTKSESSAPAV
VAPKVAPKPAAAPVAPKPAPVAAPKPVEKPVEKIVEAVKPVEKAVEKVVE
KVEAPKPVEKPVEAPKPVEAPKPVEVPQAVEKVEPVVEKVVEKVAEVDKP
VEKALEKPVEVVKPVEKAVEKVVEAVKPAPAPAPAPVAPTVDTGAPAGKG
RVLEAETVDPAFLQSLKKAKAAKHKKREQPKISCEASATAPSSDCSKGGW
SDYWFAEQLLRSAWPVRIVSDVLLSTLASASPLLASVVVGAAVCVSCAAA
GEHWQQAARVTVEVAILRYLHCLPCGLGVAAELREHTCARQLQPLAGAAL
HYAGQRGCAVAVAAAARRVRLNLFEANALLLGASHVGNACAGSRLWCLDL
GGGSDDAVGYQLRGFFCRTRGVFAARRVLSLPFDCVDTVLGCQGILSATE
RELACTTSAVGEAFRAWAGAPLSVLDAHSLGTLGARNLKGMGLVAAPVRL
FARPFMSLGWTHGTSSICMVGDPICGSFLAKLLDPTCCLLPGSGHIYSKY
LTSWAAATAGSLGA*
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