|
Homology
BLAST of jgi.p|Trimin1|352829 vs. uniprot
Match: A0A835ZF00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF00_9STRA) HSP 1 Score: 1125 bits (2909), Expect = 0.000e+0 Identity = 764/764 (100.00%), Postives = 764/764 (100.00%), Query Frame = 1
Query: 7 MMYGSASLAVLAVILAGASAFAPSSFAGRAVASRPVVSRRHELRASLEDLEARIAQREAEAAAKNKKAAPAPAAPAAKGSLFKAQSPKPAXXXXXXAAKPAPVAXXXXXXXXXXXXXXXXXVVKPTPPAPVAPKAVAPPAATSGASGTDVAAGVGLGVLPWLAAPVVALGAVRPLLAKGTAAREAVQKAAEAEAAAKAKALAESKLDKAGLTEADKKTLTAVLAVAAISLGGILVLPAISTKSESSAPAVVAPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAPKPXXXXXEAPKXXXXXXXXXXXXXXEKVEPVVEKVVEKVAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPAXXXXXVAPTVDTGAPAGKGRVLEAETVDPAFLQSLKKAKAAKHKKREQPKISCEASATAPSSDCSKGGWSDYWFAEQLLRSAWPVRIVSDVLLSTLASASPLLASVVVGAAVCVSCAAAGEHWQQAARVTVEVAILRYLHCLPCGLGVAAELREHTCARQLQPLAGAALHYAGQRGCAVAVAAAARRVRLNLFEANALLLGASHVGNACAGSRLWCLDLGGGSDDAVGYQLRGFFCRTRGVFAARRVLSLPFDCVDTVLGCQGILSATERELACTTSAVGEAFRAWAGAPLSVLDAHSLGTLGARNLKGMGLVAAPVRLFARPFMSLGWTHGTSSICMVGDPICGSFLAKLLDPTCCLLPGSGHIYSKYLTSWAAATAGSLGA 2298
MMYGSASLAVLAVILAGASAFAPSSFAGRAVASRPVVSRRHELRASLEDLEARIAQREAEAAAKNKKAAPAPAAPAAKGSLFKAQSPKPAXXXXXXAAKPAPVAXXXXXXXXXXXXXXXXXVVKPTPPAPVAPKAVAPPAATSGASGTDVAAGVGLGVLPWLAAPVVALGAVRPLLAKGTAAREAVQKAAEAEAAAKAKALAESKLDKAGLTEADKKTLTAVLAVAAISLGGILVLPAISTKSESSAPAVVAPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAPKPXXXXXEAPKXXXXXXXXXXXXXXEKVEPVVEKVVEKVAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPAXXXXXVAPTVDTGAPAGKGRVLEAETVDPAFLQSLKKAKAAKHKKREQPKISCEASATAPSSDCSKGGWSDYWFAEQLLRSAWPVRIVSDVLLSTLASASPLLASVVVGAAVCVSCAAAGEHWQQAARVTVEVAILRYLHCLPCGLGVAAELREHTCARQLQPLAGAALHYAGQRGCAVAVAAAARRVRLNLFEANALLLGASHVGNACAGSRLWCLDLGGGSDDAVGYQLRGFFCRTRGVFAARRVLSLPFDCVDTVLGCQGILSATERELACTTSAVGEAFRAWAGAPLSVLDAHSLGTLGARNLKGMGLVAAPVRLFARPFMSLGWTHGTSSICMVGDPICGSFLAKLLDPTCCLLPGSGHIYSKYLTSWAAATAGSLGA
Sbjct: 1 MMYGSASLAVLAVILAGASAFAPSSFAGRAVASRPVVSRRHELRASLEDLEARIAQREAEAAAKNKKAAPAPAAPAAKGSLFKAQSPKPAXXXXXXAAKPAPVAXXXXXXXXXXXXXXXXXVVKPTPPAPVAPKAVAPPAATSGASGTDVAAGVGLGVLPWLAAPVVALGAVRPLLAKGTAAREAVQKAAEAEAAAKAKALAESKLDKAGLTEADKKTLTAVLAVAAISLGGILVLPAISTKSESSAPAVVAPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAPKPXXXXXEAPKXXXXXXXXXXXXXXEKVEPVVEKVVEKVAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPAXXXXXVAPTVDTGAPAGKGRVLEAETVDPAFLQSLKKAKAAKHKKREQPKISCEASATAPSSDCSKGGWSDYWFAEQLLRSAWPVRIVSDVLLSTLASASPLLASVVVGAAVCVSCAAAGEHWQQAARVTVEVAILRYLHCLPCGLGVAAELREHTCARQLQPLAGAALHYAGQRGCAVAVAAAARRVRLNLFEANALLLGASHVGNACAGSRLWCLDLGGGSDDAVGYQLRGFFCRTRGVFAARRVLSLPFDCVDTVLGCQGILSATERELACTTSAVGEAFRAWAGAPLSVLDAHSLGTLGARNLKGMGLVAAPVRLFARPFMSLGWTHGTSSICMVGDPICGSFLAKLLDPTCCLLPGSGHIYSKYLTSWAAATAGSLGA 764
BLAST of jgi.p|Trimin1|352829 vs. uniprot
Match: D8LGY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY1_ECTSI) HSP 1 Score: 249 bits (637), Expect = 5.420e-70 Identity = 144/293 (49.15%), Postives = 179/293 (61.09%), Query Frame = 1
Query: 1420 VLLSTLASASPLLASVVVGAAVCVSCA----AAGEHWQQAARVTVEVAILRYLHCLPCGLGVAAELREHTCARQLQPLAGAALHYAGQRGCAVAVAAAARRVRLNLFEANALLLGASHVGNACAGSRL---------WCLDLGGGSDDAVGYQLRGFFCRTRGVFAARRVLSLPFDCVDTVLGCQGILSATERELACTTSAVGEAFRAWAGAPLSVLDAHSLGTLGARNLKGMGLVAAPVRLFARPFMSLGWTHGTSSICMVGDPICGSFLAKLLDPTCCLLPGSGHIYSKYL 2259
V+ LAS+ ++A VVG AV SCA A + W+Q AR+T+EVAI+ Y H LP GLG LR + + L GA H+ GQ VAA+ R V LN+ EAN +LLG SH+GN AGSR+ +A YQLRGFF RT G+F R +LS+PFD DT+L QGILSATERE+ + AFR +A + LDAHSLG +GARNL GMG +AA VR+F RP +SLGWT +++CM GDPICGS L KLLDPTC +L G GH Y Y+
Sbjct: 269 VVAGALASSHSVVAGFVVGLAVWASCAKRLTGAEDDWKQVARITIEVAIMWYCHALPHGLGAGRPLRGNFGTGKAGDLLGAMWHFLGQGTFIRLVAASGRVVSLNVLEANGILLGLSHLGNGLAGSRMRRVVGATAXXXXXXXXXXXEAHAYQLRGFFSRTNGIFGERPILSMPFDTADTLLALQGILSATEREVVQKNGVLASAFRDFAAQSANTLDAHSLGAVGARNLMGMGFIAARVRMFGRPALSLGWTEKATNMCMEGDPICGSLLQKLLDPTCVMLKGRGHFYDAYV 561
BLAST of jgi.p|Trimin1|352829 vs. uniprot
Match: A0A835ZCF2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCF2_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 5.280e-16 Identity = 63/112 (56.25%), Postives = 70/112 (62.50%), Query Frame = 1
Query: 424 AATSGASGTDVAAGVGLGVLPWLAAPVVALGAVRPLLAKGTAAREAVQKAAEAEAAAKAKALAESKLDKAGLTEADKKTLTAVLAVAAISLGGILVLPAISTKSESSAPAVV 759
AA G SG VAAGVGLG+LPWLAAP+VALGAVRP+LAKG A GLTEADKKTLTAVLAVAA+SLGGI P +S +S+ PAVV
Sbjct: 59 AADDGVSGPQVAAGVGLGLLPWLAAPLVALGAVRPILAKGAAXXXXXXXXXXXXXXXXXXXXXXXXDAAGGLTEADKKTLTAVLAVAALSLGGIFAQPLLSGGEKSAPPAVV 170
BLAST of jgi.p|Trimin1|352829 vs. uniprot
Match: D8LTE0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTE0_ECTSI) HSP 1 Score: 77.0 bits (188), Expect = 2.800e-11 Identity = 53/108 (49.07%), Postives = 72/108 (66.67%), Query Frame = 1
Query: 451 DVAAGVGLGVLPWLAAPVVALGAVRPLLAKGTAAREAVQKAAEAEAAAKAKALAES-KLDKAGLTEADKKTLTAVLAVAAISLGGILVLPAISTKSESSAPAVVAPKV 771
+VA GV LG LPW+ APVVAL A+RP+++KG AAR+A QKA E A A+A A + K++ GLT +D+ + A+ AVAA+ LGG+LV P + +S PA P V
Sbjct: 138 EVAEGVALGALPWVVAPVVALAALRPVISKGVAARDAEQKAKAIEEAKAAEAAARAAKME--GLTASDEGAVKALSAVAAVCLGGLLVQPLFAPPDLASLPAKPTPTV 243
BLAST of jgi.p|Trimin1|352829 vs. uniprot
Match: L1I930_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I930_GUITC) HSP 1 Score: 70.5 bits (171), Expect = 6.280e-9 Identity = 89/274 (32.48%), Postives = 118/274 (43.07%), Query Frame = 1
Query: 1543 EVAILRYLHCLPCGLGVAAELREHTCARQLQPLAGAALHYAGQRGCAVAVAAAARRVRLNLFEANALLLGASHVGNACAGSR------------LWCLDLG----GGSDDAVGYQLRGFFCRTRG--VFAARRVLSLPFDCVDTVLGCQGILSATERELACTTSAVGEAFRAWAGAPLSVLDAHSLGTLGARNLKGMGLVAAPVRLFARPFMSLGWTHGTSSICMVGDPICGSFLAKLLD--PTCCLLPGSG----HIYSKY------LTSWAA 2274
E A++ L + C V E RE + + G L GQ V+ + +R++L N LL S VG AG R ++C LG GG D+ L F R + A +L +PF+ VD++LG QGILSA+ R A V +A R A L+ HSLGTL AR +K A PV L A PF GW G ++C DP+C A +L +PG G H +Y LTSW A
Sbjct: 197 EAALMGLLEHVDCP--VEKERRE----LDVDAICGRTLRLCGQDAVRSLVSQLSGSLRVSLGLLNTALLCLSFVGVKVAGGRYTVTETSVNVNGMFCQGLGEVGGGGHDNP----LPSIFGRRDDDEMCALHALLDVPFNLVDSLLGMQGILSASGR-CAVKDELVIQAARRGAR-----LEGHSLGTLDARLMKASMGWAGPVVLLAPPFPG-GWEAGVQTVCAHSDPVCFGPAAPVLGLAKEVHRIPGRGIGIVHSRRRYKDYLRSLTSWDA 453
BLAST of jgi.p|Trimin1|352829 vs. uniprot
Match: A0A7S4PI11_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PI11_GUITH) HSP 1 Score: 64.7 bits (156), Expect = 3.800e-8 Identity = 56/145 (38.62%), Postives = 71/145 (48.97%), Query Frame = 1
Query: 1876 AARRVLSLPFDCVDTVLGCQGILSATERELACTTSAVGEAFRAWAGAPLSVLDAHSLGTLGARNLKGMGLVAAPVRLFARPFMSLGWTHGTSSICMVGDPICGSFLAKLLD--PTCCLLPGSG----HIYSKY------LTSWAA 2274
A +L +PF+ VD++LG QGILSA+ R A V +A R A L+ HSLGTL AR +K A PV L A PF GW G ++C DP+C A +L +PG G H +Y LTSW A
Sbjct: 21 ALHALLDVPFNLVDSLLGMQGILSASGR-CAGKDELVIQAARRGAR-----LEGHSLGTLDARLMKASMGWAGPVVLLAPPFPG-GWEAGVQTVCAHSDPVCFGPAAPVLGLAKEVHRIPGRGIGIVHSRRRYKDFLRSLTSWDA 158
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
ProteomeId | Trimin1|352829|estExt_Genemark1.C_Ctg_1330035 |
Hectar predicted targeting category | chloroplast |
Ec32 ortholog description | expressed unknown protein |
Ec32 ortholog | Ec-14_001490.1 |
TranscriptId | 353151 |
Track | FilteredModels1 |
ProteinId | 352829 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_14043 ID=mRNA_14043|Name=jgi.p|Trimin1|352829|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2301bp|location=Sequence derived from alignment at Contig_133:217509..226971+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.
GGCGCCATGATGTACGGGAGCGCATCGCTGGCTGTGCTGGCGGTAATCCT GGCGGGTGCCAGTGCCTTCGCCCCCTCCAGCTTCGCTGGCAGGGCTGTGG CAAGCAGGCCCGTGGTGTCTCGACGTCATGAGCTGAGGGCTTCCTTGGAG GACCTGGAGGCGCGCATAGCGCAGCGGGAGGCCGAGGCGGCGGCGAAGAA CAAAAAGGCTGCACCCGCTCCGGCCGCACCTGCCGCCAAGGGATCGCTGT TTAAGGCCCAGTCACCGAAGCCGGCAGCTCCCGCACCGAAGCCGGCGGCC AAGCCTGCGCCGGTTGCAGCCCCCAAGGCCGCCGCTCCTGCGCCTAAGGC TGCTGCGCCGGCGGCCCCTGTGGTGAAGCCCACTCCTCCGGCCCCGGTGG CGCCCAAGGCGGTCGCACCGCCTGCTGCCACGTCTGGCGCTTCTGGCACA GACGTCGCTGCTGGCGTCGGCCTCGGCGTGCTGCCCTGGCTTGCTGCCCC AGTCGTTGCTCTGGGTGCCGTGCGTCCTCTGCTCGCGAAGGGCACCGCGG CGCGCGAGGCCGTGCAGAAGGCAGCGGAGGCGGAGGCCGCCGCCAAGGCC AAGGCGCTCGCCGAGTCCAAGCTCGACAAGGCGGGCCTCACGGAGGCGGA CAAGAAGACGCTCACGGCGGTGCTCGCAGTGGCGGCCATCTCCCTCGGCG GCATCCTCGTGCTGCCCGCCATCAGCACCAAGAGCGAGAGCTCCGCGCCG GCGGTGGTGGCGCCTAAGGTGGCGCCAAAGCCCGCGGCCGCGCCTGTCGC GCCCAAGCCCGCGCCGGTGGCGGCGCCCAAGCCTGTGGAGAAGCCCGTGG AGAAGATTGTGGAGGCGGTGAAGCCCGTGGAGAAGGCGGTCGAGAAGGTG GTGGAGAAGGTCGAGGCGCCCAAGCCGGTGGAGAAGCCGGTGGAGGCGCC CAAGCCGGTGGAAGCGCCCAAGCCGGTGGAGGTGCCGCAGGCCGTGGAGA AGGTGGAGCCCGTGGTGGAGAAGGTGGTGGAGAAGGTCGCTGAGGTGGAT AAGCCCGTGGAGAAGGCGCTGGAGAAGCCGGTGGAGGTGGTGAAGCCCGT GGAGAAGGCGGTCGAGAAGGTGGTGGAGGCGGTGAAGCCGGCGCCCGCAC CCGCGCCCGCGCCCGTGGCGCCCACGGTTGACACTGGCGCCCCCGCTGGC AAGGGCCGCGTGCTGGAGGCTGAGACAGTGGACCCCGCCTTCCTGCAGAG CCTGAAGAAGGCAAAGGCCGCCAAGCACAAGAAGCGAGAGCAGCCCAAGA TCTCGTGCGAAGCCTCTGCCACGGCGCCGTCGTCGGACTGCAGCAAAGGT GGCTGGAGCGACTACTGGTTTGCCGAGCAGCTGCTGCGCAGCGCGTGGCC CGTGCGCATCGTCTCGGACGTCCTCCTGTCCACGCTCGCCAGCGCGTCGC CGCTGCTTGCGAGCGTCGTGGTGGGCGCGGCCGTCTGCGTCAGTTGCGCG GCGGCAGGGGAGCACTGGCAGCAGGCCGCCAGGGTCACGGTCGAGGTCGC CATCCTGCGCTACCTGCACTGCCTGCCGTGCGGCCTCGGCGTCGCCGCAG AGCTGCGGGAGCACACGTGCGCGCGGCAGTTGCAGCCGCTGGCGGGCGCC GCGCTGCACTACGCAGGCCAGCGCGGCTGCGCCGTCGCGGTCGCCGCCGC CGCGCGCCGCGTGCGCCTCAACCTCTTCGAGGCGAACGCGCTGCTGCTCG GCGCGAGCCACGTCGGCAACGCGTGCGCGGGCAGCCGCCTGTGGTGCCTC GACCTGGGCGGCGGCAGTGATGACGCCGTGGGCTACCAACTGCGCGGCTT CTTCTGCCGCACGCGCGGGGTCTTCGCGGCGCGGCGCGTGCTGTCGCTGC CGTTCGACTGCGTCGACACGGTGCTCGGGTGCCAGGGCATCCTCAGCGCG ACGGAGCGCGAGCTCGCCTGCACGACGTCCGCCGTCGGCGAGGCGTTCCG CGCGTGGGCGGGCGCGCCGCTGTCGGTCCTCGACGCGCACAGCCTGGGGA CGCTCGGCGCGCGCAACCTCAAGGGCATGGGCCTCGTCGCGGCGCCGGTG CGCCTGTTTGCGCGGCCGTTCATGAGCCTCGGCTGGACGCACGGCACCAG CAGCATCTGCATGGTCGGGGACCCCATCTGCGGCAGCTTCCTGGCCAAGC TGCTGGACCCGACGTGCTGCCTGCTCCCCGGCAGCGGGCACATTTACTCC AAGTACCTCACGTCGTGGGCCGCGGCCACCGCCGGCAGCCTGGGCGCCTG A back to topprotein sequence of jgi.p|Trimin1|352829 >Trimin1|352829|estExt_Genemark1.C_Ctg_1330035 ID=Trimin1|352829|estExt_Genemark1.C_Ctg_1330035|Name=jgi.p|Trimin1|352829|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=765bp
MMYGSASLAVLAVILAGASAFAPSSFAGRAVASRPVVSRRHELRASLEDL EARIAQREAEAAAKNKKAAPAPAAPAAKGSLFKAQSPKPAAPAPKPAAKP APVAAPKAAAPAPKAAAPAAPVVKPTPPAPVAPKAVAPPAATSGASGTDV AAGVGLGVLPWLAAPVVALGAVRPLLAKGTAAREAVQKAAEAEAAAKAKA LAESKLDKAGLTEADKKTLTAVLAVAAISLGGILVLPAISTKSESSAPAV VAPKVAPKPAAAPVAPKPAPVAAPKPVEKPVEKIVEAVKPVEKAVEKVVE KVEAPKPVEKPVEAPKPVEAPKPVEVPQAVEKVEPVVEKVVEKVAEVDKP VEKALEKPVEVVKPVEKAVEKVVEAVKPAPAPAPAPVAPTVDTGAPAGKG RVLEAETVDPAFLQSLKKAKAAKHKKREQPKISCEASATAPSSDCSKGGW SDYWFAEQLLRSAWPVRIVSDVLLSTLASASPLLASVVVGAAVCVSCAAA GEHWQQAARVTVEVAILRYLHCLPCGLGVAAELREHTCARQLQPLAGAAL HYAGQRGCAVAVAAAARRVRLNLFEANALLLGASHVGNACAGSRLWCLDL GGGSDDAVGYQLRGFFCRTRGVFAARRVLSLPFDCVDTVLGCQGILSATE RELACTTSAVGEAFRAWAGAPLSVLDAHSLGTLGARNLKGMGLVAAPVRL FARPFMSLGWTHGTSSICMVGDPICGSFLAKLLDPTCCLLPGSGHIYSKY LTSWAAATAGSLGA* back to topmRNA from alignment at Contig_133:217509..226971+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_14043 ID=mRNA_14043|Name=jgi.p|Trimin1|352829|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9463bp|location=Sequence derived from alignment at Contig_133:217509..226971+ (Tribonema minus UTEX_B_3156 ) GGCGCCATGATGTACGGGAGCGCATCGCTGGCTGTGCTGGCGGTAATCCT
GGCGGGTGCCAGTGCCTTCGCCCCCTCCAGCTTCGCTGGCAGGGCTGTGG
CAAGCAGGCCCGTGGTGTCTCGACGTCATGAGCTGAGGGCTTCCTTGGAG
GACCTGGAGGCGCGCATAGCGCAGCGGGAGGCCGAGGCGGCGGCGAAGAA
CAAAAAGGCTGCACCCGCTCCGGGTGAGTGCCAAGTTGCAATTACTGCAG
TGCAGCCAATGGCGAGAGCAACGCCTGTCAAGCCTGGTTCCATGGGTTTG
TGCACTGACAAAACCTGCCTGCGTGCATGCACTCTGCTGCCTCTTGTGCG
CAGCCGCACCTGCCGCCAAGGGATCGCTGTTTAAGGCCCAGTCACGTAAG
TGTTTTCCGCAGACTTGCCTGCTGGTTCAAGCTGTGCTTCTCGAGCGGTG
ACGCGTCGAACCAATGTGATGGATTATTCGCGTGCCTTTGATGCGGTGTG
GCGGTATGATGCCTCACATGCTCCCTGCGCGTTTGTGCTGAGCAGCGAAG
CCGGCAGCTCCCGCACCGAAGCCGGCGGCCAAGCCTGCGCCGGTTGCAGC
CCCCAAGGCCGCCGCTCCTGCGCCTAAGGCTGCTGCGCCGGCGGCCCCTG
TGGTGAAGCCCACTCCTCCGGCCCCGGTGGCGCCCAAGGCGGTCGCACCG
CCTGCTGCCACGTCTGGCGCTTCTGGCACAGACGTCGCTGCTGGCGTCGG
CCTCGGCGTGCTGCCCTGGCTTGCTGCCCCAGTCGTTGCTCTGGGTGCCG
TGCGTCCTCTGCTCGCGAAGGTGAGTATCTGAAAGCACTGCAGCTTTTGT
GAAGATTCCAGATAGGCGAATTTTCATGTAATGGACTTAAACTCGCCAAT
ACAGTTTGTTCAGCAGTGTGCCGAATTTGTACGACTATGCAGCTGCTATT
GGGCGCGTGCCTTTCTGAGGATATGCCCGGCTCACACATATCACTGCTCA
GCTGACGTCAAACACTCACATTGGCTAGACATCAGTGGTGAGAGAAGGCG
CTTGTTGCCGAGCGTGTGTTGCTGCAAATAGATTATTGGTGCTACGCCAT
GTCACTAAACTCATGCTGCGCAGCTTATTTTGCACTGCATGGCAAGACCA
GGTGTGTCACAGCTGGTCGCTGACCAGTCACTGTGCAGCACCACGTGCGC
AATGTGTCACGGCGCAAACTGAGGTTTCCTCAGCGCACTGCATCACCGGA
GTCTGACCTCAATGTCTTTCTTTGCCATGACAATCAAAGAGTCGCTTTGC
GGCCAGCTGCTGCATGTGATGCCGATGCCCTCGCAGCCCCCATGGCCTGA
TGGATCTGCGTGCACCTCCTATCATACAACCCCCCCCCACCCCCCTCCTG
CCAGCAATCACATCACGTTGCGACGCGCCGCTGAGCGCCGCTCCCCACCT
ACTCTGCCTGCCGCGCGCAGGGCACCGCGGCGCGCGAGGCCGTGCAGAAG
GCAGCGGAGGCGGAGGCCGCCGCCAAGGCCAAGGCGCTCGCCGAGTCCAA
GCTCGACAAGGCGGGCCTCACGGAGGCGGACAAGAAGACGCTCACGGCGG
TGCTCGCAGTGGCGGCCATCTCCCTCGGCGGCATCCTCGTGCTGCCCGCC
ATCAGCACCAAGAGCGAGAGCTCCGCGCCGGCGGTGGTGGCGCCTAAGGT
GGCGCCAAAGCCCGCGGCCGCGCCTGTCGCGCCCAAGCCCGCGCCGGTGG
CGGCGCCCAAGCCTGTGGAGAAGCCCGTGGAGAAGATTGTGGAGGCGGTG
AAGCCCGTGGAGAAGGCGGTCGAGAAGGTGGTGGAGAAGGTGAGCGGGCG
GGGGCGGGGGGGGGGGGCATTGCCTGATGCGGAAGCGGTGGTATGGTCGA
AACCCACATGGCTGACATCCTGTTGCTTGTAGTTGGGCGGTGTGCAATTT
GGACATGCGTTGATCAGAGCATCTTGCGGTGATTGCCAAAGGCGCTCGTG
GTTCTCGCAACACTCCACGGCTTAGTGCGCTGGGAGCAGCAGATGCGCCG
TCACTCCACAGGGAGCGGCGGTGACAGCCGCAGCCAATCACACACTCTCA
GAAGGAGGCCGTTGATATGGACATTGCAGCGTGACGTCGCGCCGCCGCAC
GCCTGACGCCCTGTCTCGCGCCGCGTGCTCACCGCTCCAGGTCGAGGCGC
CCAAGCCGGTGGAGAAGCCGGTGGAGGCGCCCAAGCCGGTGGAAGCGCCC
AAGCCGGTGGAGGTGCCGCAGGCCGTGGAGAAGGTGGAGCCCGTGGTGGA
GAAGGTGGTGGAGAAGGTCGCTGAGGTGGATAAGCCCGTGGAGAAGGCGC
TGGAGAAGCCGGTGGAGGTGGTGAAGCCCGTGGAGAAGGCGGTCGAGAAG
GTGGTGGAGGCGGTGAAGCCGGCGCCCGCACCCGCGCCCGCGCCCGTGGC
GCCCACGGTTGACACTGGCGCCCCCGCTGGTGAGTCGCGGTGCCCGCCCG
TTGTCGCCGTGCGGTGACTCTCAGGCAGGTCTGCCGCTTGGTTGGCGACT
GCCAGATGTGACGCAGAGGAATCGTATACTTTGAGTCGTTGTTGGCTGGT
TTGTCGTTGCCTGCAAGATGCATTCCCCACACGTAGGCAGCGTGGTGCAT
ATTGTATCTGAATGCTGCGATTGCTGCAGAGAAAGGCTTGCAAGCGGAGG
TTGTTCACTGCGACAAAGTCAGCAGTGCTCAGATGCCTTCACTGCTTCTT
GCCCATGATCAAATGGAGCACGTGAACACTGTAACAAATGGGTTGTACGT
GGTGGTCATGGCAGCAGTGTGTGTGATATGAAAACAGATCTTTTAACATC
TGCAGATCATGCCCGCGAACAAGTCGCTCAGTGACCATTCAGTGACGCGT
CTTCAACATGTCCAATCAGCCACCAATCCATCAACCGCAGTGTTATGTAC
AGCTCGAACAGCAGCATACCTTGCCATAGACTCACTAACAGTGCTTGCAA
CCCAACGATGTAGGTTTGTGCACATTGTGTGCGCTTGCATTCAACTGCGC
TGTGGTCGTACTGTCAGCAACGACCTTTGCTGTGCTCATTGACTTTTTTT
GAGATGGTTCATGAAATTAGAAGTATGCATTTGGGGCAGCAATTCGGCAT
GATACACAGACAGTTGTACTGATAGGGTTCTCTAGCACTGTCGATGATGA
GGACAGGGGCACAAGCGAGGACAGGGAGGGCCGCATGCAACACTGATTGC
TTCGCAGCGGGGCTGTTTTCCGTGCACGCTGTGCTACAGGCGTATGTGCG
TACAGTCATATGTGCATGTGTCATACACAGACAGTCATACCATAGTGAGT
ACTACCAAAAGATCAGGTGTGCACGCCCACCACACTCATGTGCTTCCAAC
GTGCCGACACCTTTGCACCAAACTCTGCAGGCAAGGGCCGCGTGCTGGAG
GCTGAGACAGTGGACCCCGCCTTCCTGCAGAGCCTGAAGAAGGCAAAGGC
CGCCAAGCAGTAAGCAGCTGCATGCTGAAGGCACAAGCGACTGCACACTG
GTCCCGGGATGGACGGTGGCGTGTGTGGGGACGAGGGGGCGGGGGGTGCG
CATGGCGGCCGGAGCTGCAGCACTGGACAAAGAGCAATTTAAGTGATTTT
GTGTGGCCTGAAGGGGCAGTCATTGTTGCGGATGGGGGAATATAGTCGGT
GGTGGTGATGGGGGACACTCAATTGTGTGACTCAGGGGGTGGATATGCCT
GTTGGTTTTGTAGAGGCCGGCGCCAGTAACCGCCGTGTCAATCATAAGCA
CACCAGAGACTGAGAAAGAGTAAGAGCAAGGAGAGATGCAGAGATGGACT
ACACCAACACCTGACACACTCATGCCACTTGAAGCTAATGCCATTCTACA
AAGAGATATGCTGTACACTCTTCAAAGTATTTTGTGTGTGTGCATTGCAA
CATGAAAGCTGGATGGCTGCTGTGTACTCAGCATGTGTTCGCCAGCAGAG
TGGGCGTACTGGTCAGATGAGCCATCAGAAGATCACAACCGTGTTGATGA
CGATCCACTCATTGGCGTTTGCTGTGTGTACATGGGCCATCGAACTCGTC
CACCCGCAAATGCCTTGCCGATGTGAGGCTGTAGTGGAACGATAATGACA
GGAGAGTCACAGTGCATGATAGCTTCAACTCAAGGTATCGAAGCATTGAT
GGCGCTCCCACCACTCTTTTCGGCTTGTGCAACAGCATGAACTTTAGATT
CTTAATGTACATGGCGACCAGTTGTCCCTGCGGGCCTTCTCGTGGCACAC
CTGTGGTGGTGATGCAGCAGTGCGCAGAGCAGCGTGAAAAAGCTGTAACG
GCTGCTGCTTTCGGGTCTATATCGCCGACATCTGGCAGTTGAATCGGTCC
GCGCCTTCCCAGAGATTCCTTGGCAATGAATGTTTCTTTTGCGACACAGG
CGACGCGCACCCCGCGAATAATGGTGGCCTCAAGGAGCGGACTGGAGAGT
TTCAGGGCCGTTGCTGGTATAGCTTCGGCCAGGCTGGAGTTTGGCTGCTA
CAGCTAGCATCATCGCACCCAGAATTCTGCAAGAAATGCCAGTGCATATT
GTTGCCGCTGCTGCAGCTCTGCTGCAGCTGCTGGCACTAGTTTCAGGCGC
TGGAAGGCATCAACATGGAAGCCTTCTGTCCCCAAACCAGCTGCAGCAGT
GTCTGGCTGCCTTCGCCTCTCCACCACGGCACTTCTTGGGCAAAGCTGGC
GAGGCAGCAACCGCTTGTCGCAAGCGGGCTGCGCTCGTAAGCCACAGGCA
TACGCCGTTCGCCGACCGGAACACGGCCATCACGGACTGGACGCCCAGAA
AGAGAGGAGTGTTTGTTGCCCTGCGTGGGGCCGGCAGGACTATAGGTGAG
CCTGAAGGTTTCTGCTGGTTTGCTTCATCTTGGCTTAAAAGTACAGTAGA
ATAGTTTGCAAAGTTGACTGCGCGGTTGCGATCTGATGGACAATCTGCGA
CTTTGACACCAACTGGATCTGAATTCGACAGCTTACGATATGACGTTCTG
AACCGTACATCCCTCATCGCTCTTCCCCCCTCGAATAATTTGGGCGGCAG
GGGTGCAGGCGCGTGCGCGGCCTGTGGTCGCCGAACCTGATGTCCGGACG
CCTGTCGGTACAGCAAGAAGCGAGAGCAGCCCAAGATCTCGTGCGAAGCC
TCTGCCACGGCGCCGTCGTCGGACTGCAGCAAAGGTGGCTGGAGCGACTA
CTGGTTTGCGCATCATTCTGAAGGTGAGATGATGTAACTGCTCATGTCCA
CTTTGGGGAGTGATTTGGGTTGACATATTGTTCAACACACAATATCGTCT
GACGATCATGGAGGTCACTGTGGGGTTTATTTCATTTACTGCACATAATT
AGTATTTTACATATCCTTGGCCTGCCTACAGTATGCCCCCCCCCCCCCCC
CCTTTTTCACACCAGCAGTTGCCGTGCAGGTGCAGCATTTGCGCGATCCT
CCCTGCTGCTGCTAGCAGCTGAATTGGGCCTTGAAACCGCTGATCGTGAG
CAGCAGGCTGCAGCAATCACTGCATTGGCAGCCACATTGGCTTTCTCAAA
ATGTGATGCTGCCTGGAGCTGCTGCTGTTGTGCCTGTATGATGGGACCCT
GGACCCTGGAGAAGTCTGTGATGGTAGAAGTAGTTTTTTTGCACGCACTG
CAGTCTCTTTCAGAGTCAGGGAATTTGTTAACAAAAAGGCCGTGCAGAAA
CCGAAGTTTTGCGTCCACCTTTCTTGCTCGCCTTATGAAGTCCACATTCA
CTCCCCCCTTCTACACTTATGAGCAAAGATACGTCCGGTGATCTTCGTCG
TCGACAAGACAATGCTCTCTCGGATACTTACAAGTTTACATTCAATTTCT
GCGGCTGCACTTGCCAACTATCACTCTGCAGGGATATCTGCAAAGAGCCC
CCGCCAGAATGGCCAAGAGTCGTTGACTTGCATTTTGATGGTGTTTGAGC
AGGTTGATTCGCGTTCAACAACAGGCGGCCCTGTCACAACACACTCCTGC
TAAATGTAAAACATTCTATAATGCAGGAACTAGTGTGTTCTGTGACAACA
TGGCTAAGATCTGCGCTGTTATGTGCTCAGCTCATCAGTAGGCCCGATTG
CGTCAACAGAAGTTGTATGCGTTGCATCCGCGAAGATCGCTGGCATGTAA
TTGACTGGGCTTAGCAACATGCTGCTCCAAGGCCAGTGCGTCAGGCGACA
ACCAATTGCCATTTCCCTTCACAGCATAGCTCCACGCTGTTGTCGCAGTC
ATGGCAGCCTGTTTACAAGTGTTGATTACGGCATGTGGCATATGCAAGCT
CCTCAGTACTGTACTGCACAGCTTCCTGACTCGTAGTGCGGCTGCATGTC
CCCGCAGTGCCTGTCAATGCTCGATGCCCTGCAAAAAGCGTGACGATCAC
CAGAGCCGTGCACAGCAAGCTTCCGCCATACGCCTCTATGCCCGCCCGCC
ACTCACACTTGCGCTCTCTCGTCGTGCCCTTCCATCAATATCGCATGCAC
TGCAGTGGTCGCGCCAGCCCGTCAGGTTTGCCGAGCAGCTGCTGCGCAGC
GCGTGGCCCGTGCGCATCGTCTCGGACGTCCTCCTGTCCACGCTCGCCAG
CGCGTCGCCGCTGCTTGCGAGCGTCGTGGTGGGCGCGGCCGTCTGCGTCA
GTTGCGCGGCGGCAGGGGAGCACTGGCAGCAGGGTGAGGTCACCGCGGTC
GCGTTGTTCACAGAGGCTGCGTACTGCTGTCGACGAGGAGGCTCGCGCTT
CACGGCAGTCCTACGCGTTACAGCAGCACATACGCATGGCTAGTAGAGGC
AATGTGTCACAACATTTTTTGAGCTTGATCGTCATCGCCAAGAGTACTTG
ACAGGAACTCATCGTTGACCCCCCTGCTGGAATGTTTCTGCACGAGAACT
GCGCACTGTAGGTTCAAGGTTAAGAATTGCACTGCCTGAGAAAGGCTGTG
ATTTGGCCTCGGCCACTTTGTATCACAGACGCTGCTTTTTGCAGTGCACA
CGCCCGATCACCGCAGAATACAAGTTTAAATGTATAGATGCTGCCAGATT
TCTCATCGACCTGAACCGCCTCTGATACTCATTTGACATCTGCAATGTCC
ACCACCATTCCGTGCCTGCAGCCGCCAGGGTCACGGTCGAGGTCGCCATC
CTGCGCTACCTGCACTGCCTGCCGTGCGGCCTCGGCGTCGCCGCAGAGCT
GCGGGAGCACACGTGCGCGCGGCAGTTGCAGCCGCTGGCGGGCGCCGCGC
TGCACTACGCAGGTGCGCCGCCGCACAGCGGATACCTAGGTACCTGGCTG
GTGTATGTGACATCTGTCCTGGTGTTGAAAGTCGCAGACACCTTGCCGCA
CGCGGCTGCGTGTTGTCGCGGCGCCGCTCAGGAAGTGGTGGCCTGTTGCT
CAAGCAGCAGCAGAGCAGACTGAGCCGCTTTACGTTTACGACAGAGAGCC
TGCATGAATGCCCTTGTTGCCGCGCTCCGTATACGCGTCGGAGCCCCCTC
AAACACACGCACGCACCTTTGCCGAGCAACATTCACGCAGGATAGACCGG
TGGGAAGCCGCACAAAGTCCTACAGTACCACCGTAAACCGCGCCCTCTGA
CCTCGCGCAACGTGCCCCCTGACTCCTCACAACAACGCCGCAGGCCAGCG
CGGCTGCGCCGTCGCGGTCGCCGCCGCCGCGCGCCGCGTGCGCCTCAACC
TCTTCGAGGCGAACGCGCTGCTGCTCGGCGCGAGCCACGTCGGCAACGCG
TGCGCGGGCAGCCGCCTGTGGTGCCTCGACCTGGGCGGCGGCAGTGATGA
CGCCGTGGGCTACCAACTGCGCGGCTTCTTCTGCCGCACGCGCGGGGTCT
TCGCGGCGCGGCGCGTGCTGTCGCTGCCGTTCGACTGCGTCGACACGGTG
CTCGGGTGCCAGGGCATCCTCAGCGCGACGGAGCGCGAGGTGAGGGGCGC
CGCTGCTGAGCGCTGCTGCTGAGCGCGGCTGCCTGTGACAGTCTTCTGTG
TGGTTGCTGCTCGCGTGGCGATGGGTGTACTGAGCGCGGCATCACTGGCT
GGCGCATGTGCTGCTCTGCTCTATGGTATTGATGCCTCCTATGGGGTGTA
CCTACCCGCTGCTGCTGCACGAAGTTCATGTACCTAGTGGCGTCAAGTTG
CCTTGTGCGTCAAGTTGCCTTGTGTGGCGTTTTGTGCAAGCCAGTTCGGC
AAACAGCAGAGCCTGGTGTTGCTACAACTGAGTTCGAGCCCAGAGCCTGG
GTACAGTATAGTGTGAGAATGATCTGTCATGGGCTTGCAGGTTGGGCGCG
CACATGACACGCTCGAGCAGTCACGTCGCAAGTCACACAGACTTCCCCGC
TTGCTCAACGCCCCCCTCCAAAAGCTGCCCGCTTGCGCCATGTACGAGGC
ATCACCGGCAAGCGCCGACACCCCTGCAGAGTCAGCACTCAACGCGTTAC
ACCGCGCCATGGTGACCGCAGCTTGTGCCACCAATCTCAATTTTTACACC
TCCTCCGTGCCCCTGCACGCGCGCGCACACCGCCAGAGCGCACTCACACG
CCCATGCCCGTGTTTGTGCCGCCGCGCAGCTCGCCTGCACGACGTCCGCC
GTCGGCGAGGCGTTCCGCGCGTGGGCGGGCGCGCCGCTGTCGGTCCTCGA
CGCGCACAGCCTGGGGACGCTCGGCGCGCGCAACCTCAAGGGCATGGGCC
TCGTCGCGGCGCCGGTGCGCCTGTTTGCGCGGCCGTTCATGAGCCTCGGC
TGGACGCACGGCACCAGCAGCATCTGCATGGTGAGCGACGCGCATAACCG
TCGGCGCTAGGTCGCAGTTGAGCTTCAAAGTGCAACTGCGTCTGCATCGC
GCTGCGCGGATGGAGCCGTGGAAGCGCCGCAGGCTGCGCTCGCGATGCTT
TGTCGTTTGGTCTCGTGGTAGTTAGAGCTGCAAGCATGTAGGCGCCAGGA
CGACGGCACGTCTGTCTTCATTCTTGGCGCTGTGCGCGGAATGTCGTCTG
TGCATGCTGGCCTTGTGTGCTCACAGAACTTCTTTCCCTGTGTCATCGCC
GTACCCACATCATGGGTACAACAGCAATCCACATCATGGGTACAGCAGCA
ATGCGCTGCGCGGGAACCCGCATGTACTGCAGGGCAAGCATGTCTGCTTG
CATGAAATCAGATCGTTGATGAAATGTCAGCAACCTCGACTTTCAGCCCC
ACCGGAGTTGTTGTCCCACGTGCCCAACAGCATCTAACACGCGCCGCCGA
TGCTGACCCCTCGTTGGCCTATCAGGTCGGGGACCCCATCTGCGGCAGCT
TCCTGGCCAAGCTGCTGGACCCGACGTGCTGCCTGCTCCCCGGCAGCGGG
CACATTTACTCCAAGTACCTCACGTCGTGGGCCGCGGCCACCGCCGGCAG
CCTGGGCGCCTGA back to topCoding sequence (CDS) from alignment at Contig_133:217509..226971+ >mRNA_14043 ID=mRNA_14043|Name=jgi.p|Trimin1|352829|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2295bp|location=Sequence derived from alignment at Contig_133:217509..226971+ (Tribonema minus UTEX_B_3156 ) ATGATGTACGGGAGCGCATCGCTGGCTGTGCTGGCGGTAATCCTGGCGGG TGCCAGTGCCTTCGCCCCCTCCAGCTTCGCTGGCAGGGCTGTGGCAAGCA GGCCCGTGGTGTCTCGACGTCATGAGCTGAGGGCTTCCTTGGAGGACCTG GAGGCGCGCATAGCGCAGCGGGAGGCCGAGGCGGCGGCGAAGAACAAAAA GGCTGCACCCGCTCCGGCCGCACCTGCCGCCAAGGGATCGCTGTTTAAGG CCCAGTCACCGAAGCCGGCAGCTCCCGCACCGAAGCCGGCGGCCAAGCCT GCGCCGGTTGCAGCCCCCAAGGCCGCCGCTCCTGCGCCTAAGGCTGCTGC GCCGGCGGCCCCTGTGGTGAAGCCCACTCCTCCGGCCCCGGTGGCGCCCA AGGCGGTCGCACCGCCTGCTGCCACGTCTGGCGCTTCTGGCACAGACGTC GCTGCTGGCGTCGGCCTCGGCGTGCTGCCCTGGCTTGCTGCCCCAGTCGT TGCTCTGGGTGCCGTGCGTCCTCTGCTCGCGAAGGGCACCGCGGCGCGCG AGGCCGTGCAGAAGGCAGCGGAGGCGGAGGCCGCCGCCAAGGCCAAGGCG CTCGCCGAGTCCAAGCTCGACAAGGCGGGCCTCACGGAGGCGGACAAGAA GACGCTCACGGCGGTGCTCGCAGTGGCGGCCATCTCCCTCGGCGGCATCC TCGTGCTGCCCGCCATCAGCACCAAGAGCGAGAGCTCCGCGCCGGCGGTG GTGGCGCCTAAGGTGGCGCCAAAGCCCGCGGCCGCGCCTGTCGCGCCCAA GCCCGCGCCGGTGGCGGCGCCCAAGCCTGTGGAGAAGCCCGTGGAGAAGA TTGTGGAGGCGGTGAAGCCCGTGGAGAAGGCGGTCGAGAAGGTGGTGGAG AAGGTCGAGGCGCCCAAGCCGGTGGAGAAGCCGGTGGAGGCGCCCAAGCC GGTGGAAGCGCCCAAGCCGGTGGAGGTGCCGCAGGCCGTGGAGAAGGTGG AGCCCGTGGTGGAGAAGGTGGTGGAGAAGGTCGCTGAGGTGGATAAGCCC GTGGAGAAGGCGCTGGAGAAGCCGGTGGAGGTGGTGAAGCCCGTGGAGAA GGCGGTCGAGAAGGTGGTGGAGGCGGTGAAGCCGGCGCCCGCACCCGCGC CCGCGCCCGTGGCGCCCACGGTTGACACTGGCGCCCCCGCTGGCAAGGGC CGCGTGCTGGAGGCTGAGACAGTGGACCCCGCCTTCCTGCAGAGCCTGAA GAAGGCAAAGGCCGCCAAGCACAAGAAGCGAGAGCAGCCCAAGATCTCGT GCGAAGCCTCTGCCACGGCGCCGTCGTCGGACTGCAGCAAAGGTGGCTGG AGCGACTACTGGTTTGCCGAGCAGCTGCTGCGCAGCGCGTGGCCCGTGCG CATCGTCTCGGACGTCCTCCTGTCCACGCTCGCCAGCGCGTCGCCGCTGC TTGCGAGCGTCGTGGTGGGCGCGGCCGTCTGCGTCAGTTGCGCGGCGGCA GGGGAGCACTGGCAGCAGGCCGCCAGGGTCACGGTCGAGGTCGCCATCCT GCGCTACCTGCACTGCCTGCCGTGCGGCCTCGGCGTCGCCGCAGAGCTGC GGGAGCACACGTGCGCGCGGCAGTTGCAGCCGCTGGCGGGCGCCGCGCTG CACTACGCAGGCCAGCGCGGCTGCGCCGTCGCGGTCGCCGCCGCCGCGCG CCGCGTGCGCCTCAACCTCTTCGAGGCGAACGCGCTGCTGCTCGGCGCGA GCCACGTCGGCAACGCGTGCGCGGGCAGCCGCCTGTGGTGCCTCGACCTG GGCGGCGGCAGTGATGACGCCGTGGGCTACCAACTGCGCGGCTTCTTCTG CCGCACGCGCGGGGTCTTCGCGGCGCGGCGCGTGCTGTCGCTGCCGTTCG ACTGCGTCGACACGGTGCTCGGGTGCCAGGGCATCCTCAGCGCGACGGAG CGCGAGCTCGCCTGCACGACGTCCGCCGTCGGCGAGGCGTTCCGCGCGTG GGCGGGCGCGCCGCTGTCGGTCCTCGACGCGCACAGCCTGGGGACGCTCG GCGCGCGCAACCTCAAGGGCATGGGCCTCGTCGCGGCGCCGGTGCGCCTG TTTGCGCGGCCGTTCATGAGCCTCGGCTGGACGCACGGCACCAGCAGCAT CTGCATGGTCGGGGACCCCATCTGCGGCAGCTTCCTGGCCAAGCTGCTGG ACCCGACGTGCTGCCTGCTCCCCGGCAGCGGGCACATTTACTCCAAGTAC CTCACGTCGTGGGCCGCGGCCACCGCCGGCAGCCTGGGCGCCTGA back to top
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