Trimin1|352824|estExt_Genemark1.C_Ctg_1330030 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352824
Unique NameTrimin1|352824|estExt_Genemark1.C_Ctg_1330030
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length253
Homology
BLAST of jgi.p|Trimin1|352824 vs. uniprot
Match: A0A835ZBM5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBM5_9STRA)

HSP 1 Score: 396 bits (1018), Expect = 7.710e-138
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0
Query:    1 MVSTRTATGVKPAVVLPPLVKKPRTKKAASAAPKATTKKAEKVEETKAPEPAPVXXXXXXXXXEAKAAPAKKEAPKKAAKXXXXXXXXXXXXXXXXXXXXXXXXXDFDVVIEACKQCQAFKCDDRPRDAHRGTPLCTITDAWLQPPRSVQLLRKRAEHVQAAVKEARPDMKVAINPEKPRKGYFEIRVGATTVLSLPSMNRPFPPLKALDMDDVSKKVVAALPAGGAASLASMRGKCLTDQRSYQRESAGGA 252
            MVSTRTATGVKPAVVLPPLVKKPRTKKAASAAPKATTKKAEKVEETKAPEPAPVXXXXXXXXXEAKAAPAKKEAPKKAAKXXXXXXXXXXXXXXXXXXXXXXXXXDFDVVIEACKQCQAFKCDDRPRDAHRGTPLCTITDAWLQPPRSVQLLRKRAEHVQAAVKEARPDMKVAINPEKPRKGYFEIRVGATTVLSLPSMNRPFPPLKALDMDDVSKKVVAALPAGGAASLASMRGKCLTDQRSYQRESAGGA
Sbjct:    1 MVSTRTATGVKPAVVLPPLVKKPRTKKAASAAPKATTKKAEKVEETKAPEPAPVXXXXXXXXXEAKAAPAKKEAPKKAAKXXXXXXXXXXXXXXXXXXXXXXXXXDFDVVIEACKQCQAFKCDDRPRDAHRGTPLCTITDAWLQPPRSVQLLRKRAEHVQAAVKEARPDMKVAINPEKPRKGYFEIRVGATTVLSLPSMNRPFPPLKALDMDDVSKKVVAALPAGGAASLASMRGKCLTDQRSYQRESAGGA 252          
BLAST of jgi.p|Trimin1|352824 vs. uniprot
Match: A0A835QTH1_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835QTH1_VANPL)

HSP 1 Score: 77.4 bits (189), Expect = 8.100e-14
Identity = 46/112 (41.07%), Postives = 64/112 (57.14%), Query Frame = 0
Query:  109 VVIEACKQCQAFKCDDRPRDAHRGTPLCTITDAWLQPPRSVQLLRKRAEHVQAAVKEARPDMKVAINPEKPRKGYFEIRVGATTV-LSLPSMNRPFPPLKALDMDDVSKKVV 219
            +V+EAC QC++FK                                +RA  ++ A++EA PD+ V INP+KPR+GYFEIR   T V LSLPSM RPF P+K LDM+++ +K+V
Sbjct:   99 IVVEACTQCKSFK--------------------------------ERALMIKEAMEEAVPDISVEINPQKPRRGYFEIREEKTEVILSLPSMTRPFKPMKQLDMEELIQKLV 178          
BLAST of jgi.p|Trimin1|352824 vs. uniprot
Match: A0A835PC84_VANPL (Uncharacterized protein n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835PC84_VANPL)

HSP 1 Score: 77.4 bits (189), Expect = 1.210e-13
Identity = 46/112 (41.07%), Postives = 64/112 (57.14%), Query Frame = 0
Query:  109 VVIEACKQCQAFKCDDRPRDAHRGTPLCTITDAWLQPPRSVQLLRKRAEHVQAAVKEARPDMKVAINPEKPRKGYFEIRVGATTV-LSLPSMNRPFPPLKALDMDDVSKKVV 219
            +V+EAC QC++FK                                +RA  ++ A++EA PD+ V INP+KPR+GYFEIR   T V LSLPSM RPF P+K LDM+++ +K+V
Sbjct:  119 IVVEACTQCKSFK--------------------------------ERALMIKEAMEEAVPDISVEINPQKPRRGYFEIREEKTEVILSLPSMTRPFKPMKQLDMEELIQKLV 198          
BLAST of jgi.p|Trimin1|352824 vs. uniprot
Match: A0A836XQK0_9ROSI (Selenoprotein n=2 Tax=Salix TaxID=40685 RepID=A0A836XQK0_9ROSI)

HSP 1 Score: 72.4 bits (176), Expect = 8.120e-12
Identity = 47/112 (41.96%), Postives = 55/112 (49.11%), Query Frame = 0
Query:  109 VVIEACKQCQAFKCDDRPRDAHRGTPLCTITDAWLQPPRSVQLLRKRAEHVQAAVKEARPDMKVAINPEKPRKGYFEIRV-GATTVLSLPSMNRPFPPLKALDMDDVSKKVV 219
            +VIE CKQC AFK                                 RA  VQ  +  A P + V +NPEKPR+G FEIR  G  T +SL SM RPFPPLKALDMD V   ++
Sbjct:  110 IVIEHCKQCNAFK--------------------------------TRAIQVQDGLLSAFPGISVLLNPEKPRRGCFEIREEGGETFISLQSMKRPFPPLKALDMDKVISDII 189          
BLAST of jgi.p|Trimin1|352824 vs. uniprot
Match: A0A5N5J5N3_9ROSI (Uncharacterized protein n=3 Tax=Salix TaxID=40685 RepID=A0A5N5J5N3_9ROSI)

HSP 1 Score: 72.4 bits (176), Expect = 1.000e-11
Identity = 47/112 (41.96%), Postives = 55/112 (49.11%), Query Frame = 0
Query:  109 VVIEACKQCQAFKCDDRPRDAHRGTPLCTITDAWLQPPRSVQLLRKRAEHVQAAVKEARPDMKVAINPEKPRKGYFEIRV-GATTVLSLPSMNRPFPPLKALDMDDVSKKVV 219
            +VIE CKQC AFK                                 RA  VQ  +  A P + V +NPEKPR+G FEIR  G  T +SL SM RPFPPLKALDMD V   ++
Sbjct:  122 IVIEHCKQCNAFK--------------------------------TRAIQVQDGLLSAFPGISVLLNPEKPRRGCFEIREEGGETFISLQSMKRPFPPLKALDMDKVISDII 201          
BLAST of jgi.p|Trimin1|352824 vs. uniprot
Match: A0A8J9RLQ9_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RLQ9_9CHLO)

HSP 1 Score: 69.3 bits (168), Expect = 2.290e-11
Identity = 41/92 (44.57%), Postives = 54/92 (58.70%), Query Frame = 0
Query:  132 GTPLCTITDAWLQPPRSVQLLRKRAEHVQAAVKEARPDMKVAINPEKPRKGYFEIRV--GATTVLSLPSMNRPFPPLKALDMDDVSKKVVAA 221
            G  L  + +AW             A  ++ AVKEA PD  V+INPEKPRKG FE+R   G  T +SL  M RPF  LKALD+D+++K++  A
Sbjct:   45 GKKLSLVIEAW-------------ATKLEKAVKEAVPDAVVSINPEKPRKGCFEVRDADGTKTYISLLDMPRPFTKLKALDIDELAKEIAGA 123          
BLAST of jgi.p|Trimin1|352824 vs. uniprot
Match: U5FI91_POPTR (Uncharacterized protein n=6 Tax=Populus TaxID=3689 RepID=U5FI91_POPTR)

HSP 1 Score: 69.7 bits (169), Expect = 9.290e-11
Identity = 45/112 (40.18%), Postives = 56/112 (50.00%), Query Frame = 0
Query:  109 VVIEACKQCQAFKCDDRPRDAHRGTPLCTITDAWLQPPRSVQLLRKRAEHVQAAVKEARPDMKVAINPEKPRKGYFEIRV-GATTVLSLPSMNRPFPPLKALDMDDVSKKVV 219
            +VIE CKQC AFK                                 RA  V+ ++  A P + V +NPEKPR+G FEIR  G  T +SL +M RPFPPLKALDMD V   ++
Sbjct:  120 IVIEHCKQCNAFK--------------------------------TRAIQVKDSLLSAFPGISVLLNPEKPRRGCFEIREEGGETFISLQNMKRPFPPLKALDMDRVISDII 199          
BLAST of jgi.p|Trimin1|352824 vs. uniprot
Match: A0A022QR24_ERYGU (Uncharacterized protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QR24_ERYGU)

HSP 1 Score: 69.7 bits (169), Expect = 9.750e-11
Identity = 43/112 (38.39%), Postives = 57/112 (50.89%), Query Frame = 0
Query:  109 VVIEACKQCQAFKCDDRPRDAHRGTPLCTITDAWLQPPRSVQLLRKRAEHVQAAVKEARPDMKVAINPEKPRKGYFEIRV-GATTVLSLPSMNRPFPPLKALDMDDVSKKVV 219
            ++IE CKQC AFK                                 RA  V+ A++E  P ++V++NPEKPR+G FEIR  G    +SL  M RPFPPLK LDMD+V   ++
Sbjct:  130 IIIEHCKQCNAFK--------------------------------TRAIQVKTALEEGIPGIEVSLNPEKPRRGCFEIREEGGEVFISLLDMKRPFPPLKKLDMDEVISDIL 209          
BLAST of jgi.p|Trimin1|352824 vs. uniprot
Match: A0A0D3A2W3_BRAOL (Uncharacterized protein n=4 Tax=Brassicaceae TaxID=3700 RepID=A0A0D3A2W3_BRAOL)

HSP 1 Score: 67.8 bits (164), Expect = 1.350e-10
Identity = 43/112 (38.39%), Postives = 57/112 (50.89%), Query Frame = 0
Query:  109 VVIEACKQCQAFKCDDRPRDAHRGTPLCTITDAWLQPPRSVQLLRKRAEHVQAAVKEARPDMKVAINPEKPRKGYFEIRV-GATTVLSLPSMNRPFPPLKALDMDDVSKKVV 219
            +VIE CKQC AFK                                 RA  V+  ++ A P + V +NPEKPR+G FEIRV G  T +SL  M RPF P+KALDM++V + ++
Sbjct:   62 IVIEHCKQCNAFK--------------------------------TRAIQVKEGLEGAVPGVTVTLNPEKPRRGCFEIRVEGGETFISLLEMKRPFAPMKALDMEEVIEDII 141          
BLAST of jgi.p|Trimin1|352824 vs. uniprot
Match: A0A2P2IPV2_RHIMU (Uncharacterized protein n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2IPV2_RHIMU)

HSP 1 Score: 68.2 bits (165), Expect = 2.530e-10
Identity = 43/112 (38.39%), Postives = 57/112 (50.89%), Query Frame = 0
Query:  109 VVIEACKQCQAFKCDDRPRDAHRGTPLCTITDAWLQPPRSVQLLRKRAEHVQAAVKEARPDMKVAINPEKPRKGYFEIRV-GATTVLSLPSMNRPFPPLKALDMDDVSKKVV 219
            +VIE CKQC +FK                                KRAE V+  +++A P + V +NP+KPRKG FEIR  G  T +SL  M RPF P+K LDM++V   V+
Sbjct:  105 IVIEHCKQCTSFK--------------------------------KRAEQVERGLRDAVPGITVLLNPDKPRKGCFEIREQGGETFISLLDMKRPFKPMKDLDMEEVILDVI 184          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352824 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZBM5_9STRA7.710e-138100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835QTH1_VANPL8.100e-1441.07Uncharacterized protein n=1 Tax=Vanilla planifolia... [more]
A0A835PC84_VANPL1.210e-1341.07Uncharacterized protein n=2 Tax=Vanilla planifolia... [more]
A0A836XQK0_9ROSI8.120e-1241.96Selenoprotein n=2 Tax=Salix TaxID=40685 RepID=A0A8... [more]
A0A5N5J5N3_9ROSI1.000e-1141.96Uncharacterized protein n=3 Tax=Salix TaxID=40685 ... [more]
A0A8J9RLQ9_9CHLO2.290e-1144.57Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi ... [more]
U5FI91_POPTR9.290e-1140.18Uncharacterized protein n=6 Tax=Populus TaxID=3689... [more]
A0A022QR24_ERYGU9.750e-1138.39Uncharacterized protein n=1 Tax=Erythranthe guttat... [more]
A0A0D3A2W3_BRAOL1.350e-1038.39Uncharacterized protein n=4 Tax=Brassicaceae TaxID... [more]
A0A2P2IPV2_RHIMU2.530e-1038.39Uncharacterized protein n=1 Tax=Rhizophora mucrona... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..62
NoneNo IPR availablePANTHERPTHR33638SELENOPROTEIN Hcoord: 22..121
coord: 151..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_133contigContig_133:182074..186521 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352824mRNA_14039Tribonema minus UTEX_B_3156 mRNAContig_133 182074..186547 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352824|estExt_Genemark1.C_Ctg_1330030 ID=Trimin1|352824|estExt_Genemark1.C_Ctg_1330030|Name=jgi.p|Trimin1|352824|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=253bp
MVSTRTATGVKPAVVLPPLVKKPRTKKAASAAPKATTKKAEKVEETKAPE
PAPVEKEAEAPAPEAKAAPAKKEAPKKAAKAPAKKAAPKAAAAAAATEEA
PAAAADFDVVIEACKQCQAFKCDDRPRDAHRGTPLCTITDAWLQPPRSVQ
LLRKRAEHVQAAVKEARPDMKVAINPEKPRKGYFEIRVGATTVLSLPSMN
RPFPPLKALDMDDVSKKVVAALPAGGAASLASMRGKCLTDQRSYQRESAG
GA*
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