Trimin1|352821|estExt_Genemark1.C_Ctg_1330024 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352821
Unique NameTrimin1|352821|estExt_Genemark1.C_Ctg_1330024
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length623
Homology
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BLAST of jgi.p|Trimin1|352821 vs. uniprot
Match: A0A836CKM4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKM4_9STRA)

HSP 1 Score: 795 bits (2052), Expect = 4.310e-283
Identity = 622/622 (100.00%), Postives = 622/622 (100.00%), Query Frame = 0 
Query:    1 MPGDTEHYSAVIPARAWQVEAAEAAAAAAQAVRRGAEQRLGELQREEAVLRRQVAARREAREELEGALLALEARCRDEAGRLGALTEDRERAQREAQAQRRRYEGELSHCQAQLADRSAELEAVSAAALSKCEDLAAVQSELSACQLLLAETRQAQEGAVQDAAGRLRSLEDEAARAWSQAEAATNAASEAVVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVCXXXXXXXXXXXXARRALAAVQTELGELRRAATEAGAGMGAEVXXXXXXXXXXXXXQDEERHAXXXASVLRADASEXXXXXXXARAELDQLHAAVXXXXXXXXXXXXXXXXXXXXXXXXXAQQAQLRERRWEAPWLACGAARRTRATLLQEAARPPAVEGLQQDSSRERTALVGQQNALNDARREAAERATQASXXXXXXXXXXXAXXXXXXXXXXXXADEQRXXXXXASLDAEAQXXXXXXXXXQGRIRVDTQRAEAAQQRATDAARAAGLPFAQSLSSASAMAAAAKSTSSGATLRLGGGSLAPRGSTAQSASTPQKRGTHAAAGLGDSRQHLVDKVHALQDQVRQHGDGGGASPEHGFDNKRLREDHMLASKTARIQELERRLRQL 622
            MPGDTEHYSAVIPARAWQVEAAEAAAAAAQAVRRGAEQRLGELQREEAVLRRQVAARREAREELEGALLALEARCRDEAGRLGALTEDRERAQREAQAQRRRYEGELSHCQAQLADRSAELEAVSAAALSKCEDLAAVQSELSACQLLLAETRQAQEGAVQDAAGRLRSLEDEAARAWSQAEAATNAASEAVVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVCXXXXXXXXXXXXARRALAAVQTELGELRRAATEAGAGMGAEVXXXXXXXXXXXXXQDEERHAXXXASVLRADASEXXXXXXXARAELDQLHAAVXXXXXXXXXXXXXXXXXXXXXXXXXAQQAQLRERRWEAPWLACGAARRTRATLLQEAARPPAVEGLQQDSSRERTALVGQQNALNDARREAAERATQASXXXXXXXXXXXAXXXXXXXXXXXXADEQRXXXXXASLDAEAQXXXXXXXXXQGRIRVDTQRAEAAQQRATDAARAAGLPFAQSLSSASAMAAAAKSTSSGATLRLGGGSLAPRGSTAQSASTPQKRGTHAAAGLGDSRQHLVDKVHALQDQVRQHGDGGGASPEHGFDNKRLREDHMLASKTARIQELERRLRQL
Sbjct:    1 MPGDTEHYSAVIPARAWQVEAAEAAAAAAQAVRRGAEQRLGELQREEAVLRRQVAARREAREELEGALLALEARCRDEAGRLGALTEDRERAQREAQAQRRRYEGELSHCQAQLADRSAELEAVSAAALSKCEDLAAVQSELSACQLLLAETRQAQEGAVQDAAGRLRSLEDEAARAWSQAEAATNAASEAVVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVCXXXXXXXXXXXXARRALAAVQTELGELRRAATEAGAGMGAEVXXXXXXXXXXXXXQDEERHAXXXASVLRADASEXXXXXXXARAELDQLHAAVXXXXXXXXXXXXXXXXXXXXXXXXXAQQAQLRERRWEAPWLACGAARRTRATLLQEAARPPAVEGLQQDSSRERTALVGQQNALNDARREAAERATQASXXXXXXXXXXXAXXXXXXXXXXXXADEQRXXXXXASLDAEAQXXXXXXXXXQGRIRVDTQRAEAAQQRATDAARAAGLPFAQSLSSASAMAAAAKSTSSGATLRLGGGSLAPRGSTAQSASTPQKRGTHAAAGLGDSRQHLVDKVHALQDQVRQHGDGGGASPEHGFDNKRLREDHMLASKTARIQELERRLRQL 622
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352821 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CKM4_9STRA4.310e-283100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 433..481
NoneNo IPR availableCOILSCoilCoilcoord: 192..240
NoneNo IPR availableCOILSCoilCoilcoord: 307..362
NoneNo IPR availableCOILSCoilCoilcoord: 82..113
NoneNo IPR availableCOILSCoilCoilcoord: 19..63
NoneNo IPR availableCOILSCoilCoilcoord: 272..299
NoneNo IPR availableCOILSCoilCoilcoord: 153..173
NoneNo IPR availableCOILSCoilCoilcoord: 244..264
NoneNo IPR availableCOILSCoilCoilcoord: 605..622
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 591..605
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 415..437
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 577..605
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 539..553
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 396..410
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 531..561
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 387..437

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_133contigContig_133:148056..153608 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352821mRNA_14033Tribonema minus UTEX_B_3156 mRNAContig_133 148007..153608 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352821|estExt_Genemark1.C_Ctg_1330024 ID=Trimin1|352821|estExt_Genemark1.C_Ctg_1330024|Name=jgi.p|Trimin1|352821|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=623bp
MPGDTEHYSAVIPARAWQVEAAEAAAAAAQAVRRGAEQRLGELQREEAVL
RRQVAARREAREELEGALLALEARCRDEAGRLGALTEDRERAQREAQAQR
RRYEGELSHCQAQLADRSAELEAVSAAALSKCEDLAAVQSELSACQLLLA
ETRQAQEGAVQDAAGRLRSLEDEAARAWSQAEAATNAASEAVVVVEEAKA
RAREELARAQQGAETADRLAEEISERKRELSDVCRRAGEEGRRLADARRA
LAAVQTELGELRRAATEAGAGMGAEVARLEELRRRAAAAQDEERHARDAA
SVLRADASEVAARVAEARAELDQLHAAVDAERAALAAAQAAVRHAEEAAA
RLAAQQAQLRERRWEAPWLACGAARRTRATLLQEAARPPAVEGLQQDSSR
ERTALVGQQNALNDARREAAERATQASSAARRRKAAEEAADAAAARAAAA
EADEQRAAARRASLDAEAQSLEARIAALQGRIRVDTQRAEAAQQRATDAA
RAAGLPFAQSLSSASAMAAAAKSTSSGATLRLGGGSLAPRGSTAQSASTP
QKRGTHAAAGLGDSRQHLVDKVHALQDQVRQHGDGGGASPEHGFDNKRLR
EDHMLASKTARIQELERRLRQL*
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