mRNA_14033 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|352821
Unique NamemRNA_14033
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|352821 vs. uniprot
Match: A0A836CKM4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKM4_9STRA)

HSP 1 Score: 796 bits (2056), Expect = 1.950e-283
Identity = 622/622 (100.00%), Postives = 622/622 (100.00%), Query Frame = 1 
Query:    1 MPGDTEHYSAVIPARAWQVEAAEAAAAAAQAVRRGAEQRLGELQREEAVLRRQVAARREAREELEGALLALEARCRDEAGRLGALTEDRERAQREAQAQRRRYEGELSHCQAQLADRSAELEAVSAAALSKCEDLAAVQSELSACQLLLAETRQAQEGAVQDAAGRLRSLEDEAARAWSQAEAATNAASEAVVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVCXXXXXXXXXXXXARRALAAVQTELGELRRAATEAGAGMGAEVXXXXXXXXXXXXXQDEERHAXXXASVLRADASEXXXXXXXARAELDQLHAAVXXXXXXXXXXXXXXXXXXXXXXXXXAQQAQLRERRWEAPWLACGAARRTRATLLQEAARPPAVEGLQQDSSRERTALVGQQNALNDARREAAERATQASXXXXXXXXXXXAXXXXXXXXXXXXADEQRXXXXXASLDAEAQXXXXXXXXXQGRIRVDTQRAEAAQQRATDAARAAGLPFAQSLSSASAMAAAAKSTSSGATLRLGGGSLAPRGSTAQSASTPQKRGTHAAAGLGDSRQHLVDKVHALQDQVRQHGDGGGASPEHGFDNKRLREDHMLASKTARIQELERRLRQL 1866
            MPGDTEHYSAVIPARAWQVEAAEAAAAAAQAVRRGAEQRLGELQREEAVLRRQVAARREAREELEGALLALEARCRDEAGRLGALTEDRERAQREAQAQRRRYEGELSHCQAQLADRSAELEAVSAAALSKCEDLAAVQSELSACQLLLAETRQAQEGAVQDAAGRLRSLEDEAARAWSQAEAATNAASEAVVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVCXXXXXXXXXXXXARRALAAVQTELGELRRAATEAGAGMGAEVXXXXXXXXXXXXXQDEERHAXXXASVLRADASEXXXXXXXARAELDQLHAAVXXXXXXXXXXXXXXXXXXXXXXXXXAQQAQLRERRWEAPWLACGAARRTRATLLQEAARPPAVEGLQQDSSRERTALVGQQNALNDARREAAERATQASXXXXXXXXXXXAXXXXXXXXXXXXADEQRXXXXXASLDAEAQXXXXXXXXXQGRIRVDTQRAEAAQQRATDAARAAGLPFAQSLSSASAMAAAAKSTSSGATLRLGGGSLAPRGSTAQSASTPQKRGTHAAAGLGDSRQHLVDKVHALQDQVRQHGDGGGASPEHGFDNKRLREDHMLASKTARIQELERRLRQL
Sbjct:    1 MPGDTEHYSAVIPARAWQVEAAEAAAAAAQAVRRGAEQRLGELQREEAVLRRQVAARREAREELEGALLALEARCRDEAGRLGALTEDRERAQREAQAQRRRYEGELSHCQAQLADRSAELEAVSAAALSKCEDLAAVQSELSACQLLLAETRQAQEGAVQDAAGRLRSLEDEAARAWSQAEAATNAASEAVVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVCXXXXXXXXXXXXARRALAAVQTELGELRRAATEAGAGMGAEVXXXXXXXXXXXXXQDEERHAXXXASVLRADASEXXXXXXXARAELDQLHAAVXXXXXXXXXXXXXXXXXXXXXXXXXAQQAQLRERRWEAPWLACGAARRTRATLLQEAARPPAVEGLQQDSSRERTALVGQQNALNDARREAAERATQASXXXXXXXXXXXAXXXXXXXXXXXXADEQRXXXXXASLDAEAQXXXXXXXXXQGRIRVDTQRAEAAQQRATDAARAAGLPFAQSLSSASAMAAAAKSTSSGATLRLGGGSLAPRGSTAQSASTPQKRGTHAAAGLGDSRQHLVDKVHALQDQVRQHGDGGGASPEHGFDNKRLREDHMLASKTARIQELERRLRQL 622
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BLAST of jgi.p|Trimin1|352821 vs. uniprot
Match: A0A836CLE6_9STRA (ADF-H domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLE6_9STRA)

HSP 1 Score: 400 bits (1029), Expect = 3.230e-140
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 2 
Query:   11 MQVGDAKALHTTQRSSGLDVSSPELAAAWQKVRSKSDSHWCLFGYGPGGNTQIVVTAAGSDGFEGLRSSLTDSMAAWAGLRVSVLGSTKFVRLAFIGTEIAGMKRAKASLHRNAVFHLFEGGHCDVTFDGDGGLDAFTSEAVVGAVAEALRVEPPXXXXXXXXXXXXXXXXXXCVIPRRRAWQHLXXXXXXXXARICAVGCLPQQQLEFVQWVPGRSSAILLRSVAHCH 697
            MQVGDAKALHTTQRSSGLDVSSPELAAAWQKVRSKSDSHWCLFGYGPGGNTQIVVTAAGSDGFEGLRSSLTDSMAAWAGLRVSVLGSTKFVRLAFIGTEIAGMKRAKASLHRNAVFHLFEGGHCDVTFDGDGGLDAFTSEAVVGAVAEALRVEPPXXXXXXXXXXXXXXXXXXCVIPRRRAWQHLXXXXXXXXARICAVGCLPQQQLEFVQWVPGRSSAILLRSVAHCH
Sbjct:    1 MQVGDAKALHTTQRSSGLDVSSPELAAAWQKVRSKSDSHWCLFGYGPGGNTQIVVTAAGSDGFEGLRSSLTDSMAAWAGLRVSVLGSTKFVRLAFIGTEIAGMKRAKASLHRNAVFHLFEGGHCDVTFDGDGGLDAFTSEAVVGAVAEALRVEPPXXXXXXXXXXXXXXXXXXCVIPRRRAWQHLXXXXXXXXARICAVGCLPQQQLEFVQWVPGRSSAILLRSVAHCH 229
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BLAST of jgi.p|Trimin1|352821 vs. uniprot
Match: D8LEM3_ECTSI (ADF-H domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEM3_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 2.730e-29
Identity = 61/124 (49.19%), Postives = 84/124 (67.74%), Query Frame = 2 
Query:   11 MQVGDAKALHTTQRSSGLDVSSPELAAAWQKVRSKSD--SHWCLFGYGPGGNTQIVVTAAGSDGFEGLRSSLTDSMAAWAGLRVSV-LGSTKFVRLAFIGTEIAGMKRAKASLHRNAVFHLFEG 373
            MQVG+AKALHTT+RSSG+DVS   LA AW  +R+  +  ++WC F Y  G N+ I +  +G  G   L S+L DSM A+ G+RV    GS +F R+ F+G E+ GMK+ +A+L +NAVF +FEG
Sbjct:    1 MQVGEAKALHTTKRSSGIDVSDASLAEAWASIRTDGEPQTNWCAFTYAEGSNSVIKLLGSGIGGVSELCSTLLDSMVAFCGVRVGDDKGSARFHRILFVGEEVGGMKKGRAALAKNAVFAVFEG 124
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BLAST of jgi.p|Trimin1|352821 vs. uniprot
Match: U5HB26_USTV1 (ADF-H domain-containing protein n=4 Tax=Microbotryum TaxID=34416 RepID=U5HB26_USTV1)

HSP 1 Score: 64.7 bits (156), Expect = 1.340e-9
Identity = 37/123 (30.08%), Postives = 71/123 (57.72%), Query Frame = 2 
Query:   65 DVSSPELAAAWQKVRS-KSDSHWCLFGYGPGGNTQIVVTAAGSDGFEGLRSSLTDSMAAWAGLRVSVLGST-----KFVRLAFIGTEIAGMKRAKASLHRNAVFHLFEGGHCDVTFDGDGGLD 415
            DVSSP++AAA++ VR+ KS+++W L  Y    + ++ +TA G+ G + L++   D  A++A  R++          KF+ + +IG+ +  M++AK S+H++ V  +      +V  + +  LD
Sbjct:    3 DVSSPDIAAAYEDVRNDKSETNWLLLDYEGDKSDKLNLTATGTGGLDELKTKFADERASFAYARITYSNDKESTRDKFIFITYIGSGVRVMRKAKISIHKSEVQKVLRAFSIEVPAENEDDLD 125
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BLAST of jgi.p|Trimin1|352821 vs. uniprot
Match: A0A2N3NIT9_9PEZI (ADF-H domain-containing protein n=1 Tax=Lomentospora prolificans TaxID=41688 RepID=A0A2N3NIT9_9PEZI)

HSP 1 Score: 61.6 bits (148), Expect = 1.880e-8
Identity = 42/106 (39.62%), Postives = 58/106 (54.72%), Query Frame = 2 
Query:   56 SGLDVSSPELAAAWQKVRSKSDS-HWCLFGYGPGGNTQIVVTAAGSDGFEGLRSSLTDSMAAWAGLRVSVLGST-----KFVRLAFIGTEIAGMKRAKASLHRNAV 355
            SGL+  SPE+A+A+  VRS  DS  W L G GP GN Q+ +T  GS G E L+  L DS   +A +RV     +     KFV + +IG     M++A+ S+    V
Sbjct:    2 SGLN--SPEIASAYDAVRSDKDSTDWLLIGNGPTGN-QLTLTKTGSGGLEELKKELDDSQVQYAYVRVEYANDSESKRVKFVLVIWIGNSTKVMRKARVSIESGEV 104
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BLAST of jgi.p|Trimin1|352821 vs. uniprot
Match: A0A0M0J779_9EUKA (Methionine-r-sulfoxide reductase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J779_9EUKA)

HSP 1 Score: 61.6 bits (148), Expect = 1.730e-7
Identity = 40/106 (37.74%), Postives = 56/106 (52.83%), Query Frame = 2 
Query:   56 SGLDVSSPELAAAWQKVRSKSDSHWCLFGYGPGGNTQIVVTAAGSDGFEGLRSSLTDSMAAWAGLRVSVLGSTKFVRLAFIGTEIAGMKRAKASLHRNAVFHLFEG 373
            S LD+S PELAAAW + R+ + S WC+  Y  G  TQIV  A GSDGF+GLR++L +    +  L + V    + +   ++  E     R +A L    V  L  G
Sbjct:  169 SDLDLSDPELAAAWAETRALA-SGWCVCTYAEGSKTQIVPIARGSDGFDGLRAALLEDAINYGVLPLRVDERPRHIFFCYVVDE-----RVRAVLEGACVVELGAG 268
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BLAST of jgi.p|Trimin1|352821 vs. uniprot
Match: A0A7S4HCW9_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HCW9_9EUKA)

HSP 1 Score: 57.4 bits (137), Expect = 8.810e-7
Identity = 35/112 (31.25%), Postives = 56/112 (50.00%), Query Frame = 2 
Query:   53 SSGLDVSSPELAAAWQKVRSKSDS--HWCLFGYGPGGNTQIVVTAAGSDGFEGLRSSLTDSMAAWAGLRVSVLG---STKFVRLAFIGTEIAGMKRAKASLHRNAVFHLFEG 373
            +S +D+S PE+AAAW +    +     W   GY   G  ++   A+G+DG+ GLR+ L +    +   RV+  G   ++KF  +  IG    GM + +A+ H   V    EG
Sbjct:   19 ASAVDMSDPEIAAAWAECVGSAPQVGAWIALGYE--GKAKLKRLASGTDGYRGLRAHLAEDAVVYGAFRVTTAGESTASKFTFVTSIGENAGGMVKGRATAHAQCVEAGLEG 128
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BLAST of jgi.p|Trimin1|352821 vs. uniprot
Match: A0A167S8S7_CALVF (Uncharacterized protein n=1 Tax=Calocera viscosa (strain TUFC12733) TaxID=1330018 RepID=A0A167S8S7_CALVF)

HSP 1 Score: 55.1 bits (131), Expect = 3.410e-5
Identity = 37/110 (33.64%), Postives = 62/110 (56.36%), Query Frame = 2 
Query:   62 LDVSSPELAAAWQKVRSKSDSHWCLFGYGPGGNTQIVVTAAGSDGFEGLRSSLTDSMAAWAGLRVSVLGSTKFVRLAFIGTEIAGMKRAKASLHRNAVFHLFEGGHCDVT 391
            +D+S P + AA+ +V   + + W L GYG   N ++ +  AGS G E LR  L + +    GL ++V G  K + L ++   ++G+KRA+A +H  AV + F+  H  +T
Sbjct:    3 VDISDPNIPAAYSEVIGDAATDWLLIGYGDT-NNRLSLYEAGSRGLEELRGHLEEEVL--FGL-LNVEG--KILLLVYMPDNVSGVKRARALVHSRAVGNTFKAHHAVLT 106
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352821 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CKM4_9STRA1.950e-283100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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BLAST of jgi.p|Trimin1|352821 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A836CLE6_9STRA3.230e-140100.00ADF-H domain-containing protein n=1 Tax=Tribonema ... [more]
D8LEM3_ECTSI2.730e-2949.19ADF-H domain-containing protein n=2 Tax=Ectocarpus... [more]
U5HB26_USTV11.340e-930.08ADF-H domain-containing protein n=4 Tax=Microbotry... [more]
A0A2N3NIT9_9PEZI1.880e-839.62ADF-H domain-containing protein n=1 Tax=Lomentospo... [more]
A0A0M0J779_9EUKA1.730e-737.74Methionine-r-sulfoxide reductase n=1 Tax=Chrysochr... [more]
A0A7S4HCW9_9EUKA8.810e-731.25Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A167S8S7_CALVF3.410e-533.64Uncharacterized protein n=1 Tax=Calocera viscosa (... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_133contigContig_133:148007..153608 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|352821|estExt_Genemark1.C_Ctg_1330024
Hectar predicted targeting categoryother localisation
TranscriptId353143
TrackFilteredModels1
ProteinId352821
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352821gene_14033Tribonema minus UTEX_B_3156 geneContig_133 148007..153608 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_14033_12exon_14033_12Tribonema minus UTEX_B_3156 exonContig_133 148007..148146 -
exon_14033_11exon_14033_11Tribonema minus UTEX_B_3156 exonContig_133 148520..148702 -
exon_14033_10exon_14033_10Tribonema minus UTEX_B_3156 exonContig_133 148823..148969 -
exon_14033_9exon_14033_9Tribonema minus UTEX_B_3156 exonContig_133 149262..149434 -
exon_14033_8exon_14033_8Tribonema minus UTEX_B_3156 exonContig_133 149988..150095 -
exon_14033_7exon_14033_7Tribonema minus UTEX_B_3156 exonContig_133 150673..150756 -
exon_14033_6exon_14033_6Tribonema minus UTEX_B_3156 exonContig_133 150827..151084 -
exon_14033_5exon_14033_5Tribonema minus UTEX_B_3156 exonContig_133 151409..151580 -
exon_14033_4exon_14033_4Tribonema minus UTEX_B_3156 exonContig_133 152025..152158 -
exon_14033_3exon_14033_3Tribonema minus UTEX_B_3156 exonContig_133 152279..152485 -
exon_14033_2exon_14033_2Tribonema minus UTEX_B_3156 exonContig_133 153051..153344 -
exon_14033_1exon_14033_1Tribonema minus UTEX_B_3156 exonContig_133 153591..153608 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_14033UTR3_14033Tribonema minus UTEX_B_3156 three_prime_UTRContig_133 148007..148055 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_14033CDS_14033Tribonema minus UTEX_B_3156 CDSContig_133 153591..153608 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352821Trimin1|352821|estExt_Genemark1.C_Ctg_1330024Tribonema minus UTEX_B_3156 polypeptideContig_133 148056..153608 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_14033 ID=mRNA_14033|Name=jgi.p|Trimin1|352821|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1918bp|location=Sequence derived from alignment at Contig_133:148007..153608- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCTGGGGACACGGAGCACTACAGCGCCGTCATCCCGGCGCGTGCGTG
GCAGGTGGAGGCGGCGGAGGCGGCGGCGGCGGCGGCGCAGGCGGTGCGCA
GGGGCGCGGAGCAGCGCCTCGGCGAGCTGCAGCGCGAAGAGGCGGTGCTG
CGGCGGCAGGTGGCGGCGCGGCGCGAGGCGCGCGAGGAGCTCGAGGGCGC
GCTGCTGGCGCTAGAGGCGCGCTGCCGCGACGAGGCGGGGCGCTTGGGCG
CGCTGACGGAGGACCGCGAGCGCGCGCAGCGCGAGGCGCAGGCACAGCGG
CGGCGGTACGAGGGCGAGCTGTCGCATTGCCAGGCGCAGCTCGCGGATCG
CTCCGCGGAGCTGGAGGCTGTCTCCGCGGCGGCGCTGTCCAAGTGCGAGG
ACCTCGCGGCGGTCCAGTCGGAGCTGTCTGCGTGCCAGCTGCTGCTGGCG
GAGACGCGGCAGGCGCAGGAGGGCGCCGTGCAGGACGCCGCGGGCAGGCT
GAGGTCCTTGGAAGACGAGGCGGCGAGGGCGTGGTCGCAGGCGGAGGCGG
CGACGAACGCCGCGTCGGAGGCCGTGGTCGTGGTGGAGGAGGCCAAGGCG
CGGGCGCGAGAGGAGCTGGCGCGCGCACAGCAGGGCGCGGAGACCGCAGA
CAGGCTGGCGGAGGAGATCTCCGAGAGGAAGCGCGAGCTGAGCGACGTGT
GCAGGCGCGCTGGCGAGGAGGGGCGGCGGCTGGCAGACGCAAGACGCGCG
CTCGCCGCCGTGCAGACGGAGCTGGGCGAGCTGCGGCGCGCCGCCACGGA
GGCGGGCGCCGGCATGGGCGCAGAGGTCGCGCGCCTGGAGGAGCTGCGGC
GGCGCGCGGCGGCGGCGCAGGACGAGGAGCGCCACGCGCGCGACGCCGCG
TCGGTGCTGCGCGCGGATGCCTCGGAAGTGGCAGCGCGCGTCGCGGAGGC
GCGCGCGGAGCTGGACCAGCTGCACGCCGCCGTGGACGCGGAGCGCGCGG
CGCTGGCGGCGGCGCAGGCGGCGGTGCGGCACGCCGAGGAGGCGGCGGCG
CGGCTGGCGGCGCAGCAGGCGCAGCTGCGGGAGCGTAGATGGGAGGCGCC
GTGGCTGGCGTGCGGCGCGGCGCGGCGGACGCGCGCGACGCTGCTGCAGG
AGGCGGCGCGCCCACCGGCGGTGGAGGGCCTGCAGCAGGACAGCTCCCGG
GAGCGCACGGCACTGGTCGGCCAGCAGAACGCGCTAAATGACGCGCGACG
CGAGGCGGCGGAGCGCGCAACGCAGGCGTCCAGCGCGGCGCGGCGGCGCA
AGGCGGCGGAGGAGGCGGCGGACGCAGCGGCGGCGCGCGCGGCGGCGGCG
GAGGCGGACGAACAGCGCGCGGCGGCGCGGCGCGCAAGCCTCGACGCGGA
GGCGCAGTCGCTGGAGGCGCGCATCGCGGCGCTGCAGGGGCGCATACGGG
TCGACACGCAGAGGGCGGAGGCGGCGCAGCAGCGTGCGACGGACGCAGCG
CGCGCGGCAGGCCTTCCGTTCGCGCAGAGCTTAAGCTCAGCGTCCGCCAT
GGCAGCGGCTGCCAAGAGCACCTCTAGCGGTGCCACACTGCGCCTTGGCG
GCGGCTCACTGGCGCCGCGCGGTTCCACGGCGCAGAGCGCGTCGACGCCG
CAGAAACGCGGCACGCACGCTGCTGCAGGCCTCGGCGACAGCAGGCAGCA
TCTGGTAGACAAGGTCCACGCGCTGCAAGACCAGGTGCGGCAGCATGGCG
ACGGCGGCGGCGCGTCGCCGGAGCACGGCTTTGACAACAAGCGGTTACGT
GAGGATCACATGCTGGCGTCCAAGACAGCGAGGATACAAGAGCTCGAGCG
GAGGCTGCGCCAGCTGTAAATATCATGCACAGAACGGGCATTAAAATTCA
ACGGTTGTGACATGCACA
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protein sequence of jgi.p|Trimin1|352821

>Trimin1|352821|estExt_Genemark1.C_Ctg_1330024 ID=Trimin1|352821|estExt_Genemark1.C_Ctg_1330024|Name=jgi.p|Trimin1|352821|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=623bp
MPGDTEHYSAVIPARAWQVEAAEAAAAAAQAVRRGAEQRLGELQREEAVL
RRQVAARREAREELEGALLALEARCRDEAGRLGALTEDRERAQREAQAQR
RRYEGELSHCQAQLADRSAELEAVSAAALSKCEDLAAVQSELSACQLLLA
ETRQAQEGAVQDAAGRLRSLEDEAARAWSQAEAATNAASEAVVVVEEAKA
RAREELARAQQGAETADRLAEEISERKRELSDVCRRAGEEGRRLADARRA
LAAVQTELGELRRAATEAGAGMGAEVARLEELRRRAAAAQDEERHARDAA
SVLRADASEVAARVAEARAELDQLHAAVDAERAALAAAQAAVRHAEEAAA
RLAAQQAQLRERRWEAPWLACGAARRTRATLLQEAARPPAVEGLQQDSSR
ERTALVGQQNALNDARREAAERATQASSAARRRKAAEEAADAAAARAAAA
EADEQRAAARRASLDAEAQSLEARIAALQGRIRVDTQRAEAAQQRATDAA
RAAGLPFAQSLSSASAMAAAAKSTSSGATLRLGGGSLAPRGSTAQSASTP
QKRGTHAAAGLGDSRQHLVDKVHALQDQVRQHGDGGGASPEHGFDNKRLR
EDHMLASKTARIQELERRLRQL*
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mRNA from alignment at Contig_133:148007..153608-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_14033 ID=mRNA_14033|Name=jgi.p|Trimin1|352821|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5602bp|location=Sequence derived from alignment at Contig_133:148007..153608- (Tribonema minus UTEX_B_3156 )
ATGCCTGGGGACACGGAGGTGGCGGCAATTTGCGTGTGCAGGGCCGCTGG
GCAGCGCGCCGGCAAGCCGAGCCATGTGGCATCATGTGTTTGCCGCGCGC
GCGGCGGCCGTCACGCGGTCACAACATTGGCAGCAGTGGCGATGACCTCT
GACGCGCTCGCCGCAGGTCGAGGTGGTGCAAGCTGTGGCGGCTTGCGTCG
CAGCGACCCAGGCTTCATCACGGCATGACATGACTCTCGAGCCTGCCAGC
TCCCATCGCCACAGCACTACAGCGCCGTCATCCCGGCGCGTGCGTGGCAG
GTGGAGGCGGCGGAGGCGGCGGCGGCGGCGGCGCAGGCGGTGCGCAGGGG
CGCGGAGCAGCGCCTCGGCGAGCTGCAGCGCGAAGAGGCGGTGCTGCGGC
GGCAGGTGGCGGCGCGGCGCGAGGCGCGCGAGGAGCTCGAGGGCGCGCTG
CTGGCGCTAGAGGCGCGCTGCCGCGACGAGGCGGGGCGCTTGGGCGCGCT
GACGGAGGACCGCGAGCGCGCGCAGCGCGAGGCGCAGGCACAGCGGCGGC
GGTACGAGGTGAGAGAGCACACGCCGTGCACTGCGCGGAGATGCTGCGCG
GATTGGCATTGTGTCTCGCGTAGGAGGCGCGCGCGCGGGCGCAAGGCGCG
CTAGGAGATGCCGCGCAGATGGGCACTGTGTCTCGCGCGCGTCGGCTGCG
ATTGGTGCGCTGCTGCTGGCGGGGGCTTGGGGGGGAGGGGGGGGGGGGTC
GTGCAGCAGGCCGTGCGCTGCGTTGCATGGCAGGCACCACCAGGCGCGTG
TGCACGGAAGTTAAGTCATGCTGTTGCGTAGGGGCCTTCTCTGGGGTGGC
GTGGTAATGTAGTGTCACAGGTGCGATGACACCTGCGATGGCGGCTGAGG
GCGGCGGGCAGTTCGGCACGTCCGCAGTGCTGGTTTTGAGCGCGGCCACG
CTCAGCACCTGGCGGCCACAGCCCGGCGCGCCAGCAGCGTGAAGCGCGGA
GCGTACAGGCAGCCTTCGTCACGCTCGTCGTACGCTCTCACTGTTGCATT
CGCAGCAGTGCCATTTGTACAACCCCCCTGCTCAGTGCTTCGCATGCCCC
CCCCCGCGCGCGCTGCACGACAGGGCGAGCTGTCGCATTGCCAGGCGCAG
CTCGCGGATCGCTCCGCGGAGCTGGAGGCTGTCTCCGCGGCGGCGCTGTC
CAAGTGCGAGGACCTCGCGGCGGTCCAGTCGGAGCTGTCTGCGTGCCAGC
TGCTGCTGGCGGAGACGCGGCAGGCGCAGGAGGGCGCCGTGCAGGACGCC
GCGGGCAGGCTGAGGTCCTTGGAAGACGAGGTAAGGCAACTGCAGTTGAC
GCTCCGCACGGAGGGCACGGGTGCGTCCACGTCGGCACGCCGTTTCACCA
TGCTGCGGCGACGCGACTGACAGCGCCGAGTACTGCCCCGCTTTGCGCAG
GCGGCGAGGGCGTGGTCGCAGGCGGAGGCGGCGACGAACGCCGCGTCGGA
GGCCGTGGTCGTGGTGGAGGAGGCCAAGGCGCGGGCGCGAGAGGAGCTGG
CGCGCGCACAGCAGGGCGCGGAGACCGCAGACAGGTAGGTGCAGTGACGG
GGCTGCAGTGCGTGGCGGCGCGCTCGTGCATCCACGTTGTGGCTTGTGAG
GCTCGCGTGCCGTGTGACGCGTTGCGGCGTGGGCGGCGACGGCGTACGTT
ATTGTCGCGCTTTCGCGGCGCTGTGGGGTCCTCCGTTTCTGAAGGCCAGT
CGAGCGCTTGATTGCGGGCGTCAGCGGTTGCGGTCGCTTGAACCTTTCCG
TGACACAGCAGACGGCAGCTCGCCGCGCGCCCATGCCCTCAGCAGCGCGC
TGCTCTGCGAGGCAGCGCTCCCCGTCCTCCCTCCTGCGCTGACGTGCCAG
TGCTACACGCAGCGTTCAGCGCATCGTGCAATGCATGCGCGCACGCACGA
GCCAAACGACCTGCACGTACCTCATCCCCTCCCTTCCTCCGCTGCGCCGC
GCCGCGCCGCGCCGTGTACTGCGTGCAGGCTGGCGGAGGAGATCTCCGAG
AGGAAGCGCGAGCTGAGCGACGTGTGCAGGCGCGCTGGCGAGGAGGGGCG
GCGGCTGGCAGACGCAAGACGCGCGCTCGCCGCCGTGCAGACGGAGCTGG
GCGAGCTGCGGCGCGCCGCCACGGAGGCGGGCGCCGGCATGGGCGCAGAG
GTGGGGCGGCGTGTGTGTGCGTGGAAGTTCAATTGCGCGGCGACGCCGCG
GGGCTGGTGCAGCGAGCGCCGCGCGCGCGTGGGCTGTGGTTTGTGTGTGC
GTGCGAGTGTGTGTGTGTGTGTGTAATATATCAGCGCTCTCCTGTGTGGG
CGCCCCGGGCACCGCTCCCCCATGGCGGACAGGCACTGCCATGACGGCAC
TGACTTCATGTCACACATAATTGCCGCAGCACCGCCGTGACATTGCCAAC
AGTCACGCCGCCGCGCCGCACACGCGCACCGTACTCACGCCCGCGTCTCT
CCAACATGTGCCGCGCTCACTCAGGTCGCGCGCCTGGAGGAGCTGCGGCG
GCGCGCGGCGGCGGCGCAGGACGAGGAGCGCCACGCGCGCGACGCCGCGT
CGGTGCTGCGCGCGGATGCCTCGGAAGTGGCAGCGCGCGTCGCGGAGGCG
CGCGCGGAGCTGGACCAGCTGCACGCCGCCGTGGACGCGGAGCGCGCGGC
GCTGGCGGCGGCGCAGGCGGCGGTGCGGCACGCCGAGGAGGCGGCGGCGC
GGCTGGCGGCGCAGCAGGCGCAGCTGCGGGAGGTACGTGCGCAACGCACA
GGGCATGCACTGGTGCCGTCCGTTCGCTAGGAGTGCCCGACGGCATCGAC
AGCGTAGATGGGAGGCGCCGTGGCTGGCGTGCGGCGCGGCGCGGCGGACG
CGCGCGACGCTGCTGCAGGAGGCGGCGCGCCCACCGGTCACCGTTGCGTG
AGAGTGTGCATGATGCAAGAGCGCGGTGGCGCGCAGGGGGTTGGTGTGTT
GCGTCTGCGTCTGCGGCGGGCACAGCCGCGGAGGGTGCGCAGCTTGCGTG
CAGCAGCAGCGGCACACAGCAGCAGCGCCGCAGGGGACTGCGGGTGATTT
GCAGACGGCATGCGCATGGGTGCCCATGCGCCTTAGATCAGCGCTCATTG
GCTTCGAGATGCCGCTGTGAGTAAGGACGTGCCATTGTGGTGCTAATGAC
GTGAAGTCGCTGAAGAATCCAACGTCCATTTGGTACAAGTACCAGGTATT
TTATAGTTGCCGGGGACAGATTTTGTGGGCGGTTGCTCAAATCCTTTAGC
TAGATTCGTTGTGTGGTGGTCACCAATGTGCTGCTGATTTCAACCACAGA
GCTACAAATTGTGCCGAACCTCACCCCTGCTTGCGTTAGTTATCGCTGGG
TCCAGATCGGGGCCTATCACCGCGTTGCTGTAGCCAGGAGTGGGCAAGGG
TGTCCTCAGTGCTCCGCACCTCACGGTCGCGCGCTTGCTGGACTCGTGTA
CGCTCTTGCACAGGCGGTGGAGGGCCTGCAGCAGGACAGCTCCCGGGAGC
GCACGGCACTGGTCGGCCAGCAGAACGCGCTAAATGACGCGCGACGCGAG
GCGGCGGAGCGCGCAACGCAGGTGACGCACCTGCTTCGCACTTGAAGTCT
GTCATCAACTCACTTGTGACCGAACTAATCACGTTCCAGAGTGCGTGCAA
AAGCAGCTTGGCTCGAGGTGTGCCGAAAGTGCTCATGCGCCTATTATTCA
AGCACGCAACGGGCGCGCTTGCCTCGACAGAGCAGGCTGTGGGTACCTGC
AGCAGTGCTCAGGCGACTGCGGCAGCGCCCAAGCAATTGTTGCAGCGCTG
AACAGTGCCTTGAAGCTGGCTGCCCCATCACTGTAGATGCGTACTGTGTG
AGTTGAATGCACCGAGGCGCCCCGTGGGCAGGTGTACTCGGCAAGGACCA
GCAGCATCCGCAGCAGCAGAGAGCATCAACGCCTGCGACATCATCTCCCC
GTTGGCCTGAAGCCCTGCCGCCGCGCGCCACGCGGCACAGCGCAGCCCTG
CTGCAGGCCATTGAAACGCGCTAGCACGGCACAAGCGCCCGCTCATCTCA
CAGCTCAGCCTCACCCACGAGAGACACGTCTGATTCGGCTCATCCATGCG
CACCGCGTCTTGTTGCCGCGGCAGGCGTCCAGCGCGGCGCGGCGGCGCAA
GGCGGCGGAGGAGGCGGCGGACGCAGCGGCGGCGCGCGCGGCGGCGGCGG
AGGCGGACGAACAGCGCGCGGCGGCGCGGCGCGCAAGCCTCGACGCGGAG
GCGCAGTCGCTGGAGGCGCGCATCGCGGCGCTGCAGGGGCGCATACGGTG
CGTCGCCTTGTATGGTTTATCAATGTCGCTCGCTGCTGCAGGTCGGACTA
TGGTGCGTGGAAGCAAAGCAGTGGCACTGTCTAATGAAGGCGGCGTGGCG
AGGGGCATAGGGAGATGTGGCCGGTAAGGTATGGGAGACTGTTACGTGTG
CGCTGGTGCCTGCGGGCGGTACCCGCGTGATCATCTGCGGTGAGGCAGCA
CAAGCGTTCAATCTTGTCGCCACCTGCACGGCATGGGTGCATGCTCTCGA
TGACCACCTGACGATCGCTCTCGTGTCGCTCTGCACCAGGGTCGACACGC
AGAGGGCGGAGGCGGCGCAGCAGCGTGCGACGGACGCAGCGCGCGCGGCA
GGCCTTCCGTTCGCGCAGAGCTTAAGCTCAGCGTCCGCCATGGCAGCGGC
TGCCAAGAGCACCTCTAGCGGTGCCACACTGCGCCTGTGCCAGAGCTCGC
AGGCCGGCACCAGCAGCCTAGCCGCTTCAAATGCCCATGCTCCCCATGGG
CTAAGCAGCGCCACTTCCACGCGACAACAACACCAACCGCCGCCGCCGCG
TGACAGTGGCGGCGGCTCACTGGCGCCGCGCGGTTCCACGGCGCAGAGCG
CGTCGACGCCGCAGAAACGCGGCACGCACGCTGCTGCAGGCCTCGGCGAC
AGCAGGCAGCATCTGGTAGACAAGGTCCACGCGCTGCAAGACCAGGTGCG
GCAGCATGGCGACGGCGGCGGCGCGTCGCCGGAGCACGGGTCGCCAGCAG
CGCGTCCCACTAAATACAGGCAAGCCCTCGACAGCTGTAGGTCAGCGACT
GGCGTGACGATGCATGGCGTGTGGGGCGTGTGCTGGCGCCTTGTCTGCAG
ATGAGCGCAGCAAATTGCAGCGTTGCCGGCTCATGGATCCATGCGCGGCC
AGCAAACTCAGAGGGGCCAGCTATGCATTCGTCACAGCCTTGATGTATGG
CATTCTGCATCACCCAAACGCTTCATCCTTGTTGCGTCCTTGCGAAAATG
CCTGGCGCAAATGGCGCTTTCATGGGGGCCAGATGACGTTTCGGTCACGC
ACATCATGGTAGTGCACCGACGGCTCATGCTAGCGCCGCCTGTGCCCCGC
CCCGCTCTGCAGCTTTGACAACAAGCGGTTACGTGAGGATCACATGCTGG
CGTCCAAGACAGCGAGGATACAAGAGCTCGAGCGGAGGCTGCGCCAGCTG
TAAATATCATGCACAGAACGGGCATTAAAATTCAACGGTTGTGACATGCA
CA
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Coding sequence (CDS) from alignment at Contig_133:148007..153608-

>mRNA_14033 ID=mRNA_14033|Name=jgi.p|Trimin1|352821|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1869bp|location=Sequence derived from alignment at Contig_133:148007..153608- (Tribonema minus UTEX_B_3156 )
ATGCCTGGGGACACGGAGCACTACAGCGCCGTCATCCCGGCGCGTGCGTG
GCAGGTGGAGGCGGCGGAGGCGGCGGCGGCGGCGGCGCAGGCGGTGCGCA
GGGGCGCGGAGCAGCGCCTCGGCGAGCTGCAGCGCGAAGAGGCGGTGCTG
CGGCGGCAGGTGGCGGCGCGGCGCGAGGCGCGCGAGGAGCTCGAGGGCGC
GCTGCTGGCGCTAGAGGCGCGCTGCCGCGACGAGGCGGGGCGCTTGGGCG
CGCTGACGGAGGACCGCGAGCGCGCGCAGCGCGAGGCGCAGGCACAGCGG
CGGCGGTACGAGGGCGAGCTGTCGCATTGCCAGGCGCAGCTCGCGGATCG
CTCCGCGGAGCTGGAGGCTGTCTCCGCGGCGGCGCTGTCCAAGTGCGAGG
ACCTCGCGGCGGTCCAGTCGGAGCTGTCTGCGTGCCAGCTGCTGCTGGCG
GAGACGCGGCAGGCGCAGGAGGGCGCCGTGCAGGACGCCGCGGGCAGGCT
GAGGTCCTTGGAAGACGAGGCGGCGAGGGCGTGGTCGCAGGCGGAGGCGG
CGACGAACGCCGCGTCGGAGGCCGTGGTCGTGGTGGAGGAGGCCAAGGCG
CGGGCGCGAGAGGAGCTGGCGCGCGCACAGCAGGGCGCGGAGACCGCAGA
CAGGCTGGCGGAGGAGATCTCCGAGAGGAAGCGCGAGCTGAGCGACGTGT
GCAGGCGCGCTGGCGAGGAGGGGCGGCGGCTGGCAGACGCAAGACGCGCG
CTCGCCGCCGTGCAGACGGAGCTGGGCGAGCTGCGGCGCGCCGCCACGGA
GGCGGGCGCCGGCATGGGCGCAGAGGTCGCGCGCCTGGAGGAGCTGCGGC
GGCGCGCGGCGGCGGCGCAGGACGAGGAGCGCCACGCGCGCGACGCCGCG
TCGGTGCTGCGCGCGGATGCCTCGGAAGTGGCAGCGCGCGTCGCGGAGGC
GCGCGCGGAGCTGGACCAGCTGCACGCCGCCGTGGACGCGGAGCGCGCGG
CGCTGGCGGCGGCGCAGGCGGCGGTGCGGCACGCCGAGGAGGCGGCGGCG
CGGCTGGCGGCGCAGCAGGCGCAGCTGCGGGAGCGTAGATGGGAGGCGCC
GTGGCTGGCGTGCGGCGCGGCGCGGCGGACGCGCGCGACGCTGCTGCAGG
AGGCGGCGCGCCCACCGGCGGTGGAGGGCCTGCAGCAGGACAGCTCCCGG
GAGCGCACGGCACTGGTCGGCCAGCAGAACGCGCTAAATGACGCGCGACG
CGAGGCGGCGGAGCGCGCAACGCAGGCGTCCAGCGCGGCGCGGCGGCGCA
AGGCGGCGGAGGAGGCGGCGGACGCAGCGGCGGCGCGCGCGGCGGCGGCG
GAGGCGGACGAACAGCGCGCGGCGGCGCGGCGCGCAAGCCTCGACGCGGA
GGCGCAGTCGCTGGAGGCGCGCATCGCGGCGCTGCAGGGGCGCATACGGG
TCGACACGCAGAGGGCGGAGGCGGCGCAGCAGCGTGCGACGGACGCAGCG
CGCGCGGCAGGCCTTCCGTTCGCGCAGAGCTTAAGCTCAGCGTCCGCCAT
GGCAGCGGCTGCCAAGAGCACCTCTAGCGGTGCCACACTGCGCCTTGGCG
GCGGCTCACTGGCGCCGCGCGGTTCCACGGCGCAGAGCGCGTCGACGCCG
CAGAAACGCGGCACGCACGCTGCTGCAGGCCTCGGCGACAGCAGGCAGCA
TCTGGTAGACAAGGTCCACGCGCTGCAAGACCAGGTGCGGCAGCATGGCG
ACGGCGGCGGCGCGTCGCCGGAGCACGGCTTTGACAACAAGCGGTTACGT
GAGGATCACATGCTGGCGTCCAAGACAGCGAGGATACAAGAGCTCGAGCG
GAGGCTGCGCCAGCTGTAA
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