Trimin1|352742|estExt_Genemark1.C_Ctg_1290066 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|352742
Unique Name	Trimin1\|352742\|estExt_Genemark1.C_Ctg_1290066
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	231

Homology

[Close]

BLAST of jgi.p|Trimin1|352742 vs. uniprot
Match: A0A835ZFU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFU2_9STRA)

HSP 1 Score: 461 bits (1186), Expect = 3.600e-164
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0

Query:    1 MFGPLRLGLWLALSVIRVPLSVVLWVGEACLFGVSVVIDALKLILQTVPSVARLAFRAGCLSVWVAAVLGIYQLSYEEGGELMVMVRDVARHCAMFVCAARHLPVPWGVNGVSDSQLSRAWRMFALVHHPDKNGDSSIATFVCVQQALQMLKEHEGLMRLWVLARPLLAIPPWLAAPLAFAAACTLAHWWRPPLLLPSRCLPPRAAARTPRAPVPPVAMPIAQPHFLSSG 230
            MFGPLRLGLWLALSVIRVPLSVVLWVGEACLFGVSVVIDALKLILQTVPSVARLAFRAGCLSVWVAAVLGIYQLSYEEGGELMVMVRDVARHCAMFVCAARHLPVPWGVNGVSDSQLSRAWRMFALVHHPDKNGDSSIATFVCVQQALQMLKEHEGLMRLWVLARPLLAIPPWLAAPLAFAAACTLAHWWRPPLLLPSRCLPPRAAARTPRAPVPPVAMPIAQPHFLSSG
Sbjct:    1 MFGPLRLGLWLALSVIRVPLSVVLWVGEACLFGVSVVIDALKLILQTVPSVARLAFRAGCLSVWVAAVLGIYQLSYEEGGELMVMVRDVARHCAMFVCAARHLPVPWGVNGVSDSQLSRAWRMFALVHHPDKNGDSSIATFVCVQQALQMLKEHEGLMRLWVLARPLLAIPPWLAAPLAFAAACTLAHWWRPPLLLPSRCLPPRAAARTPRAPVPPVAMPIAQPHFLSSG 230

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|352742 vs. uniprot

BLAST of jgi.p|Trimin1|352742 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835ZFU2_9STRA	3.600e-164	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036869	Chaperone J-domain superfamily	GENE3D	1.10.287.110	DnaJ domain	coord: 108..156 e-value: 2.5E-6 score: 29.2
IPR036869	Chaperone J-domain superfamily	SUPERFAMILY	46565	Chaperone J-domain	coord: 99..154
IPR001623	DnaJ domain	CDD	cd06257	DnaJ	coord: 103..152 e-value: 1.09738E-6 score: 42.5325

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_129	contig	Contig_129:418892..420943 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352742	mRNA_9896	Tribonema minus UTEX_B_3156	mRNA	Contig_129 418830..421100 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|352742|estExt_Genemark1.C_Ctg_1290066 ID=Trimin1|352742|estExt_Genemark1.C_Ctg_1290066|Name=jgi.p|Trimin1|352742|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=231bp
MFGPLRLGLWLALSVIRVPLSVVLWVGEACLFGVSVVIDALKLILQTVPS
VARLAFRAGCLSVWVAAVLGIYQLSYEEGGELMVMVRDVARHCAMFVCAA
RHLPVPWGVNGVSDSQLSRAWRMFALVHHPDKNGDSSIATFVCVQQALQM
LKEHEGLMRLWVLARPLLAIPPWLAAPLAFAAACTLAHWWRPPLLLPSRC
LPPRAAARTPRAPVPPVAMPIAQPHFLSSG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036869	J_dom_sf
IPR001623	DnaJ_domain