Trimin1|352467|estExt_Genemark1.C_Ctg_1190072 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352467
Unique NameTrimin1|352467|estExt_Genemark1.C_Ctg_1190072
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length561
Homology
BLAST of jgi.p|Trimin1|352467 vs. uniprot
Match: A0A836CMY4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMY4_9STRA)

HSP 1 Score: 932 bits (2410), Expect = 0.000e+0
Identity = 560/560 (100.00%), Postives = 560/560 (100.00%), Query Frame = 0
Query:    1 MGKGAAQPAAPGRCQITCRLHKGNYIGGEQVAGFLSITTPASDGASSALILTQASVRAHGHARVDPRWTNLPKPLRTLYQQDKEEPAGDSSSPSVRRRRPRYKDLDNANTVCIFSTDCVVLPLDDDDNSSSTHPVDTVNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRAPRDVPPSFKGVVARYLYFATVTVTLARHAASPAAGWGVGRLLGAVRRRSSGGSXXXXXXXXAVTVTTEEHSLHLPFALLATGRPPREAPALPPDVCWATLQAQLEHASEAEDGAQGSSGSGSANAGQRPLLLARTHASVWDLQGKARGGTGGHPLVFGIRSGDARILRFMLYKREFWPGDLVLGTFDMAGADCTCHQICACLLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQAHQRIVDVFHELGPCAQTTSMALALPADAPLSFATDLDAVRWLLRFEFTIGAARTAAAPPSAAPAAAADNPTPRGGARPSRTNSILSIGGPGVLAGVSEPAAAAAAPEQYRVLRWEVPIAVVTPAASAEAPRPPFASQEGAVERTAFC 560
            MGKGAAQPAAPGRCQITCRLHKGNYIGGEQVAGFLSITTPASDGASSALILTQASVRAHGHARVDPRWTNLPKPLRTLYQQDKEEPAGDSSSPSVRRRRPRYKDLDNANTVCIFSTDCVVLPLDDDDNSSSTHPVDTVNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRAPRDVPPSFKGVVARYLYFATVTVTLARHAASPAAGWGVGRLLGAVRRRSSGGSXXXXXXXXAVTVTTEEHSLHLPFALLATGRPPREAPALPPDVCWATLQAQLEHASEAEDGAQGSSGSGSANAGQRPLLLARTHASVWDLQGKARGGTGGHPLVFGIRSGDARILRFMLYKREFWPGDLVLGTFDMAGADCTCHQICACLLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQAHQRIVDVFHELGPCAQTTSMALALPADAPLSFATDLDAVRWLLRFEFTIGAARTAAAPPSAAPAAAADNPTPRGGARPSRTNSILSIGGPGVLAGVSEPAAAAAAPEQYRVLRWEVPIAVVTPAASAEAPRPPFASQEGAVERTAFC
Sbjct:    1 MGKGAAQPAAPGRCQITCRLHKGNYIGGEQVAGFLSITTPASDGASSALILTQASVRAHGHARVDPRWTNLPKPLRTLYQQDKEEPAGDSSSPSVRRRRPRYKDLDNANTVCIFSTDCVVLPLDDDDNSSSTHPVDTVNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRAPRDVPPSFKGVVARYLYFATVTVTLARHAASPAAGWGVGRLLGAVRRRSSGGSXXXXXXXXAVTVTTEEHSLHLPFALLATGRPPREAPALPPDVCWATLQAQLEHASEAEDGAQGSSGSGSANAGQRPLLLARTHASVWDLQGKARGGTGGHPLVFGIRSGDARILRFMLYKREFWPGDLVLGTFDMAGADCTCHQICACLLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQAHQRIVDVFHELGPCAQTTSMALALPADAPLSFATDLDAVRWLLRFEFTIGAARTAAAPPSAAPAAAADNPTPRGGARPSRTNSILSIGGPGVLAGVSEPAAAAAAPEQYRVLRWEVPIAVVTPAASAEAPRPPFASQEGAVERTAFC 560          
BLAST of jgi.p|Trimin1|352467 vs. uniprot
Match: A0A2D4CID3_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CID3_PYTIN)

HSP 1 Score: 64.7 bits (156), Expect = 3.080e-7
Identity = 41/134 (30.60%), Postives = 58/134 (43.28%), Query Frame = 0
Query:  328 VFGIRSGDARILRFMLYKREFWPGDLVLGTFDMAGADCTCHQICACLLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQAHQRIVDVFHELGPCAQTTSMALALPADAPLSFATDLDAVRWLLRFEFT 461
            ++ I   DA ++RF+L K+ F PGD++LG FD +     CH I A L V+                                      +++   HEL   A  T++   +P DA  S  TDL   +WLLRFEFT
Sbjct:  488 IYTIGKDDAHLVRFLLTKQFFHPGDVLLGVFDFSNGKIPCHAISASLCVDETLAAMSLQPGKV----------------------VQSKVIASTHELTALAVHTNIRFCVPHDAIPSIQTDLVCFQWLLRFEFT 599          
BLAST of jgi.p|Trimin1|352467 vs. uniprot
Match: A0A2D4CF31_PYTIN (Choline-phosphate cytidylyltransferase n=3 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF31_PYTIN)

HSP 1 Score: 64.7 bits (156), Expect = 3.700e-7
Identity = 41/134 (30.60%), Postives = 58/134 (43.28%), Query Frame = 0
Query:  328 VFGIRSGDARILRFMLYKREFWPGDLVLGTFDMAGADCTCHQICACLLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQAHQRIVDVFHELGPCAQTTSMALALPADAPLSFATDLDAVRWLLRFEFT 461
            ++ I   DA ++RF+L K+ F PGD++LG FD +     CH I A L V+                                      +++   HEL   A  T++   +P DA  S  TDL   +WLLRFEFT
Sbjct:  488 IYTIGKDDAHLVRFLLTKQFFHPGDVLLGVFDFSNGKIPCHAISASLCVDETLAAMSLQPGKV----------------------VQSKVIASTHELTALAVHTNIRFCVPHDAIPSIQTDLVCFQWLLRFEFT 599          
BLAST of jgi.p|Trimin1|352467 vs. uniprot
Match: K3WSJ1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSJ1_GLOUD)

HSP 1 Score: 62.0 bits (149), Expect = 1.730e-6
Identity = 55/214 (25.70%), Postives = 85/214 (39.72%), Query Frame = 0
Query:  328 VFGIRSGDARILRFMLYKREFWPGDLVLGTFDMAGADCTCHQICACLLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQAHQRIVDVFHELGPCAQTTSMALALPADAPLSFATDLDAVRWLLRFEFTIGAARTAAAPPSAAPAAAADNPTPRGGARPSRTNSILSIGGPGVLAGVSEPAAAAAAPEQYRVLRWEVPIAVVTPAASAE 541
            +F I    + ++RF+L K+ F PG+++LG FD + A   C+++ A L +E                                +   H R    FHE       T++   +P DA  S  TDL   +W++RFEFT G            PAA+ D+ T       +  N++                       Q +  RW+VPI VV PA++ E
Sbjct:  313 IFTIGKDSSHLVRFLLTKQFFQPGEILLGVFDFSRAVIPCYEVAATLCLEETLSSMSLDP----------------------SRVVHSREFGSFHEYTGSVLHTNVRFCIPQDALPSIRTDLVCFQWVIRFEFTAGVVPD--------PAASGDDVT-------ANNNNVA----------------------QRQTFRWQVPI-VVRPASATE 466          
BLAST of jgi.p|Trimin1|352467 vs. uniprot
Match: A0A8K1FQB6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FQB6_PYTOL)

HSP 1 Score: 61.2 bits (147), Expect = 2.720e-6
Identity = 38/134 (28.36%), Postives = 61/134 (45.52%), Query Frame = 0
Query:  328 VFGIRSGDARILRFMLYKREFWPGDLVLGTFDMAGADCTCHQICACLLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQAHQRIVDVFHELGPCAQTTSMALALPADAPLSFATDLDAVRWLLRFEFT 461
            +F I   D+ ++RF+L K+ + PG+++LG FD + A   C++I A L +E                                +     + V  FHE    A  T++  ++P DA  +  TDL   +WL+RFEFT
Sbjct:  274 IFTIGRDDSHLVRFLLTKQFYHPGEMLLGIFDFSKASIPCYEISATLCMEETLASMSLHP----------------------SKVVQSKEVGFFHEYTTSALQTNVRFSIPHDAIPTIKTDLVCFQWLIRFEFT 385          
BLAST of jgi.p|Trimin1|352467 vs. uniprot
Match: A0A5D6Y7Q8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7Q8_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 7.690e-6
Identity = 39/138 (28.26%), Postives = 61/138 (44.20%), Query Frame = 0
Query:  328 VFGIRSGDARILRFMLYKREFWPGDLVLGTFDMAGADCTCHQICACLLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQAHQRIVDVFHELGPCAQTTSMALALPADAPLSFATDLDAVRWLLRFEFTIGAA 465
            +F I   ++ ++RF+L K+ + PGD++LG FD A A   C+++ A L +E                                +     +    F E    A  T++   +P DA  +  TDL + +WLLRFEFT G A
Sbjct:  360 IFTIGKDNSHLVRFLLTKQSYQPGDVLLGVFDFARAALPCYEVAATLCLEETLSTMSLDP----------------------SRVVSSKEFGAFREFTGGAVHTNVQFCVPHDAVPTIRTDLVSFQWLLRFEFTAGVA 475          
BLAST of jgi.p|Trimin1|352467 vs. uniprot
Match: A0A2P4XIQ6_9STRA (Rgp1 like protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XIQ6_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 6.650e-5
Identity = 36/137 (26.28%), Postives = 60/137 (43.80%), Query Frame = 0
Query:  328 VFGIRSGDARILRFMLYKREFWPGDLVLGTFDMAGADCTCHQICACLLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQAHQRIVDVFHELGPCAQTTSMALALPADAPLSFATDLDAVRWLLRFEFTIGA 464
            +F I    + ++RF+L K+ + PG+++LG FD + A   C+++ A L +E                                      ++   FHE       T++  ++P DA  +  TDL   +WLLRFEF+ GA
Sbjct:  206 IFTIGKDSSHLVRFLLTKQFYQPGEVLLGIFDFSRASIPCYEVSATLCLEETLSSMALDPDRV----------------------VQSKVFGSFHERTLGVLQTNVRFSIPHDALPTITTDLLRFQWLLRFEFSAGA 320          
BLAST of jgi.p|Trimin1|352467 vs. uniprot
Match: D0NQM2_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NQM2_PHYIT)

HSP 1 Score: 56.6 bits (135), Expect = 8.640e-5
Identity = 36/137 (26.28%), Postives = 59/137 (43.07%), Query Frame = 0
Query:  328 VFGIRSGDARILRFMLYKREFWPGDLVLGTFDMAGADCTCHQICACLLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQAHQRIVDVFHELGPCAQTTSMALALPADAPLSFATDLDAVRWLLRFEFTIGA 464
            +F I    + ++RF+L K+ + PG+++LG FD   A   C+++ A L +E                                      ++   FHE       T++  ++P DA  +  TDL   +WLLRFEF+ GA
Sbjct:  314 IFTIGKDSSHLVRFLLTKQFYQPGEVLLGVFDFTRASIPCYEVSATLCLEETLSSMALDPDRV----------------------VQSKVFGKFHERTLDTLQTNVRFSIPHDALPTIKTDLVRFQWLLRFEFSAGA 428          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352467 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A836CMY4_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2D4CID3_PYTIN3.080e-730.60Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A2D4CF31_PYTIN3.700e-730.60Choline-phosphate cytidylyltransferase n=3 Tax=Pyt... [more]
K3WSJ1_GLOUD1.730e-625.70Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1FQB6_PYTOL2.720e-628.36Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6Y7Q8_9STRA7.690e-628.26Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A2P4XIQ6_9STRA6.650e-526.28Rgp1 like protein n=1 Tax=Phytophthora palmivora v... [more]
D0NQM2_PHYIT8.640e-526.28Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014752Arrestin-like, C-terminalGENE3D2.60.40.640coord: 12..204
e-value: 2.0E-5
score: 26.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 473..495
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 279..299
IPR014848Reduced growth phenotype protein 1PANTHERPTHR12507REDUCED GROWTH PHENOTYPE 1 RGP1, YEAST -RELATEDcoord: 14..540

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_119contigContig_119:423704..427394 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352467mRNA_10668Tribonema minus UTEX_B_3156 mRNAContig_119 423704..427478 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352467|estExt_Genemark1.C_Ctg_1190072 ID=Trimin1|352467|estExt_Genemark1.C_Ctg_1190072|Name=jgi.p|Trimin1|352467|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=561bp
MGKGAAQPAAPGRCQITCRLHKGNYIGGEQVAGFLSITTPASDGASSALI
LTQASVRAHGHARVDPRWTNLPKPLRTLYQQDKEEPAGDSSSPSVRRRRP
RYKDLDNANTVCIFSTDCVVLPLDDDDNSSSTHPVDTVNGDGDGAADAAP
PPRQQQQPRPSKTYAYSFTFRAPRDVPPSFKGVVARYLYFATVTVTLARH
AASPAAGWGVGRLLGAVRRRSSGGSGSGNGGAEAVTVTTEEHSLHLPFAL
LATGRPPREAPALPPDVCWATLQAQLEHASEAEDGAQGSSGSGSANAGQR
PLLLARTHASVWDLQGKARGGTGGHPLVFGIRSGDARILRFMLYKREFWP
GDLVLGTFDMAGADCTCHQICACLLVEERAAAAAWHGDGGAAAAAGRGGG
SAAAAAEAAATQAHQRIVDVFHELGPCAQTTSMALALPADAPLSFATDLD
AVRWLLRFEFTIGAARTAAAPPSAAPAAAADNPTPRGGARPSRTNSILSI
GGPGVLAGVSEPAAAAAAPEQYRVLRWEVPIAVVTPAASAEAPRPPFASQ
EGAVERTAFC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014752Arrestin-like_C
IPR014848Rgp1