mRNA_10668 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|352467
Unique NamemRNA_10668
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|352467 vs. uniprot
Match: A0A836CMY4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMY4_9STRA)

HSP 1 Score: 932 bits (2409), Expect = 0.000e+0
Identity = 560/560 (100.00%), Postives = 560/560 (100.00%), Query Frame = 1 
Query:    1 MGKGAAQPAAPGRCQITCRLHKGNYIGGEQVAGFLSITTPASDGASSALILTQASVRAHGHARVDPRWTNLPKPLRTLYQQDKEEPAGDSSSPSVRRRRPRYKDLDNANTVCIFSTDCVVLPLDDDDNSSSTHPVDTVNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRAPRDVPPSFKGVVARYLYFATVTVTLARHAASPAAGWGVGRLLGAVRRRSSGGSXXXXXXXXAVTVTTEEHSLHLPFALLATGRPPREAPALPPDVCWATLQAQLEHASEAEDGAQGSSGSGSANAGQRPLLLARTHASVWDLQGKARGGTGGHPLVFGIRSGDARILRFMLYKREFWPGDLVLGTFDMAGADCTCHQICACLLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQAHQRIVDVFHELGPCAQTTSMALALPADAPLSFATDLDAVRWLLRFEFTIGAARTAAAPPSAAPAAAADNPTPRGGARPSRTNSILSIGGPGVLAGVSEPAAAAAAPEQYRVLRWEVPIAVVTPAASAEAPRPPFASQEGAVERTAFC 1680
            MGKGAAQPAAPGRCQITCRLHKGNYIGGEQVAGFLSITTPASDGASSALILTQASVRAHGHARVDPRWTNLPKPLRTLYQQDKEEPAGDSSSPSVRRRRPRYKDLDNANTVCIFSTDCVVLPLDDDDNSSSTHPVDTVNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRAPRDVPPSFKGVVARYLYFATVTVTLARHAASPAAGWGVGRLLGAVRRRSSGGSXXXXXXXXAVTVTTEEHSLHLPFALLATGRPPREAPALPPDVCWATLQAQLEHASEAEDGAQGSSGSGSANAGQRPLLLARTHASVWDLQGKARGGTGGHPLVFGIRSGDARILRFMLYKREFWPGDLVLGTFDMAGADCTCHQICACLLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQAHQRIVDVFHELGPCAQTTSMALALPADAPLSFATDLDAVRWLLRFEFTIGAARTAAAPPSAAPAAAADNPTPRGGARPSRTNSILSIGGPGVLAGVSEPAAAAAAPEQYRVLRWEVPIAVVTPAASAEAPRPPFASQEGAVERTAFC
Sbjct:    1 MGKGAAQPAAPGRCQITCRLHKGNYIGGEQVAGFLSITTPASDGASSALILTQASVRAHGHARVDPRWTNLPKPLRTLYQQDKEEPAGDSSSPSVRRRRPRYKDLDNANTVCIFSTDCVVLPLDDDDNSSSTHPVDTVNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRAPRDVPPSFKGVVARYLYFATVTVTLARHAASPAAGWGVGRLLGAVRRRSSGGSXXXXXXXXAVTVTTEEHSLHLPFALLATGRPPREAPALPPDVCWATLQAQLEHASEAEDGAQGSSGSGSANAGQRPLLLARTHASVWDLQGKARGGTGGHPLVFGIRSGDARILRFMLYKREFWPGDLVLGTFDMAGADCTCHQICACLLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQAHQRIVDVFHELGPCAQTTSMALALPADAPLSFATDLDAVRWLLRFEFTIGAARTAAAPPSAAPAAAADNPTPRGGARPSRTNSILSIGGPGVLAGVSEPAAAAAAPEQYRVLRWEVPIAVVTPAASAEAPRPPFASQEGAVERTAFC 560
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BLAST of jgi.p|Trimin1|352467 vs. uniprot
Match: A0A2D4CID3_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CID3_PYTIN)

HSP 1 Score: 64.7 bits (156), Expect = 3.360e-7
Identity = 41/134 (30.60%), Postives = 58/134 (43.28%), Query Frame = 1 
Query:  982 VFGIRSGDARILRFMLYKREFWPGDLVLGTFDMAGADCTCHQICACLLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQAHQRIVDVFHELGPCAQTTSMALALPADAPLSFATDLDAVRWLLRFEFT 1383
            ++ I   DA ++RF+L K+ F PGD++LG FD +     CH I A L V+                                      +++   HEL   A  T++   +P DA  S  TDL   +WLLRFEFT
Sbjct:  488 IYTIGKDDAHLVRFLLTKQFFHPGDVLLGVFDFSNGKIPCHAISASLCVDETLAAMSLQPGKV----------------------VQSKVIASTHELTALAVHTNIRFCVPHDAIPSIQTDLVCFQWLLRFEFT 599
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BLAST of jgi.p|Trimin1|352467 vs. uniprot
Match: A0A2D4CF31_PYTIN (Choline-phosphate cytidylyltransferase n=3 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF31_PYTIN)

HSP 1 Score: 64.7 bits (156), Expect = 4.040e-7
Identity = 41/134 (30.60%), Postives = 58/134 (43.28%), Query Frame = 1 
Query:  982 VFGIRSGDARILRFMLYKREFWPGDLVLGTFDMAGADCTCHQICACLLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQAHQRIVDVFHELGPCAQTTSMALALPADAPLSFATDLDAVRWLLRFEFT 1383
            ++ I   DA ++RF+L K+ F PGD++LG FD +     CH I A L V+                                      +++   HEL   A  T++   +P DA  S  TDL   +WLLRFEFT
Sbjct:  488 IYTIGKDDAHLVRFLLTKQFFHPGDVLLGVFDFSNGKIPCHAISASLCVDETLAAMSLQPGKV----------------------VQSKVIASTHELTALAVHTNIRFCVPHDAIPSIQTDLVCFQWLLRFEFT 599
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BLAST of jgi.p|Trimin1|352467 vs. uniprot
Match: K3WSJ1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSJ1_GLOUD)

HSP 1 Score: 62.0 bits (149), Expect = 1.880e-6
Identity = 55/214 (25.70%), Postives = 85/214 (39.72%), Query Frame = 1 
Query:  982 VFGIRSGDARILRFMLYKREFWPGDLVLGTFDMAGADCTCHQICACLLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQAHQRIVDVFHELGPCAQTTSMALALPADAPLSFATDLDAVRWLLRFEFTIGAARTAAAPPSAAPAAAADNPTPRGGARPSRTNSILSIGGPGVLAGVSEPAAAAAAPEQYRVLRWEVPIAVVTPAASAE 1623
            +F I    + ++RF+L K+ F PG+++LG FD + A   C+++ A L +E                                +   H R    FHE       T++   +P DA  S  TDL   +W++RFEFT G            PAA+ D+ T       +  N++                       Q +  RW+VPI VV PA++ E
Sbjct:  313 IFTIGKDSSHLVRFLLTKQFFQPGEILLGVFDFSRAVIPCYEVAATLCLEETLSSMSLDP----------------------SRVVHSREFGSFHEYTGSVLHTNVRFCIPQDALPSIRTDLVCFQWVIRFEFTAGVVPD--------PAASGDDVT-------ANNNNVA----------------------QRQTFRWQVPI-VVRPASATE 466
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BLAST of jgi.p|Trimin1|352467 vs. uniprot
Match: A0A8K1FQB6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FQB6_PYTOL)

HSP 1 Score: 61.2 bits (147), Expect = 2.940e-6
Identity = 38/134 (28.36%), Postives = 61/134 (45.52%), Query Frame = 1 
Query:  982 VFGIRSGDARILRFMLYKREFWPGDLVLGTFDMAGADCTCHQICACLLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQAHQRIVDVFHELGPCAQTTSMALALPADAPLSFATDLDAVRWLLRFEFT 1383
            +F I   D+ ++RF+L K+ + PG+++LG FD + A   C++I A L +E                                +     + V  FHE    A  T++  ++P DA  +  TDL   +WL+RFEFT
Sbjct:  274 IFTIGRDDSHLVRFLLTKQFYHPGEMLLGIFDFSKASIPCYEISATLCMEETLASMSLHP----------------------SKVVQSKEVGFFHEYTTSALQTNVRFSIPHDAIPTIKTDLVCFQWLIRFEFT 385
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BLAST of jgi.p|Trimin1|352467 vs. uniprot
Match: A0A5D6Y7Q8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7Q8_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 8.340e-6
Identity = 39/138 (28.26%), Postives = 61/138 (44.20%), Query Frame = 1 
Query:  982 VFGIRSGDARILRFMLYKREFWPGDLVLGTFDMAGADCTCHQICACLLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQAHQRIVDVFHELGPCAQTTSMALALPADAPLSFATDLDAVRWLLRFEFTIGAA 1395
            +F I   ++ ++RF+L K+ + PGD++LG FD A A   C+++ A L +E                                +     +    F E    A  T++   +P DA  +  TDL + +WLLRFEFT G A
Sbjct:  360 IFTIGKDNSHLVRFLLTKQSYQPGDVLLGVFDFARAALPCYEVAATLCLEETLSTMSLDP----------------------SRVVSSKEFGAFREFTGGAVHTNVQFCVPHDAVPTIRTDLVSFQWLLRFEFTAGVA 475
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BLAST of jgi.p|Trimin1|352467 vs. uniprot
Match: A0A2P4XIQ6_9STRA (Rgp1 like protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XIQ6_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 7.160e-5
Identity = 36/137 (26.28%), Postives = 60/137 (43.80%), Query Frame = 1 
Query:  982 VFGIRSGDARILRFMLYKREFWPGDLVLGTFDMAGADCTCHQICACLLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQAHQRIVDVFHELGPCAQTTSMALALPADAPLSFATDLDAVRWLLRFEFTIGA 1392
            +F I    + ++RF+L K+ + PG+++LG FD + A   C+++ A L +E                                      ++   FHE       T++  ++P DA  +  TDL   +WLLRFEF+ GA
Sbjct:  206 IFTIGKDSSHLVRFLLTKQFYQPGEVLLGIFDFSRASIPCYEVSATLCLEETLSSMALDPDRV----------------------VQSKVFGSFHERTLGVLQTNVRFSIPHDALPTITTDLLRFQWLLRFEFSAGA 320
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BLAST of jgi.p|Trimin1|352467 vs. uniprot
Match: D0NQM2_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NQM2_PHYIT)

HSP 1 Score: 56.6 bits (135), Expect = 9.340e-5
Identity = 36/137 (26.28%), Postives = 59/137 (43.07%), Query Frame = 1 
Query:  982 VFGIRSGDARILRFMLYKREFWPGDLVLGTFDMAGADCTCHQICACLLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQAHQRIVDVFHELGPCAQTTSMALALPADAPLSFATDLDAVRWLLRFEFTIGA 1392
            +F I    + ++RF+L K+ + PG+++LG FD   A   C+++ A L +E                                      ++   FHE       T++  ++P DA  +  TDL   +WLLRFEF+ GA
Sbjct:  314 IFTIGKDSSHLVRFLLTKQFYQPGEVLLGVFDFTRASIPCYEVSATLCLEETLSSMALDPDRV----------------------VQSKVFGKFHERTLDTLQTNVRFSIPHDALPTIKTDLVRFQWLLRFEFSAGA 428
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352467 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A836CMY4_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2D4CID3_PYTIN3.360e-730.60Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A2D4CF31_PYTIN4.040e-730.60Choline-phosphate cytidylyltransferase n=3 Tax=Pyt... [more]
K3WSJ1_GLOUD1.880e-625.70Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1FQB6_PYTOL2.940e-628.36Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6Y7Q8_9STRA8.340e-628.26Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A2P4XIQ6_9STRA7.160e-526.28Rgp1 like protein n=1 Tax=Phytophthora palmivora v... [more]
D0NQM2_PHYIT9.340e-526.28Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_119contigContig_119:423704..427478 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|352467|estExt_Genemark1.C_Ctg_1190072
BRITEko00000,ko04131
KEGG koko:K20477
GOsGO:0000139,GO:0003674,GO:0005085,GO:0005088,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005802,GO:0005829,GO:0005886,GO:0006810,GO:0008150,GO:0009892,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0010605,GO:0010646,GO:0010647,GO:0012505,GO:0016020,GO:0016192,GO:0016197,GO:0016482,GO:0017016,GO:0017112,GO:0017137,GO:0019222,GO:0019899,GO:0023051,GO:0023056,GO:0031090,GO:0031267,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031984,GO:0032006,GO:0032008,GO:0032045,GO:0032268,GO:0032269,GO:0032588,GO:0032991,GO:0034066,GO:0042147,GO:0042176,GO:0042177,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043547,GO:0044093,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050789,GO:0050790,GO:0050794,GO:0051020,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051336,GO:0051345,GO:0051641,GO:0051649,GO:0060255,GO:0065007,GO:0065009,GO:0071944,GO:0080090,GO:0098588,GO:0098772,GO:0098791,GO:1902531,GO:1902533,GO:1903362,GO:1903363,GO:1903939,GO:1904515
Preferred nameRGP1
DescriptionRab guanyl-nucleotide exchange factor activity
COG categoryJ
Max annot lvl2759|Eukaryota
EggNOG OGsKOG4469@1|root,KOG4469@2759|Eukaryota
Evalue5.53e-44
Seed ortholog2880.D8LDZ5
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionReduced growth phenotype protein 1
Ec32 orthologEc-23_003190.1
TranscriptId352789
TrackFilteredModels1
ProteinId352467
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352467gene_10668Tribonema minus UTEX_B_3156 geneContig_119 423704..427478 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352467Trimin1|352467|estExt_Genemark1.C_Ctg_1190072Tribonema minus UTEX_B_3156 polypeptideContig_119 423704..427394 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_10668_1exon_10668_1Tribonema minus UTEX_B_3156 exonContig_119 423704..423862 +
exon_10668_2exon_10668_2Tribonema minus UTEX_B_3156 exonContig_119 424812..424954 +
exon_10668_3exon_10668_3Tribonema minus UTEX_B_3156 exonContig_119 425545..426061 +
exon_10668_4exon_10668_4Tribonema minus UTEX_B_3156 exonContig_119 426531..427478 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_10668CDS_10668Tribonema minus UTEX_B_3156 CDSContig_119 423704..423862 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_10668UTR3_10668Tribonema minus UTEX_B_3156 three_prime_UTRContig_119 427395..427478 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_10668 ID=mRNA_10668|Name=jgi.p|Trimin1|352467|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1767bp|location=Sequence derived from alignment at Contig_119:423704..427478+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCAAGGGAGCAGCTCAGCCAGCAGCCCCAGGGCGGTGCCAGATCAC
CTGCAGGCTGCACAAGGGCAACTACATTGGCGGCGAGCAGGTCGCAGGAT
TTCTGTCCATCACAACGCCTGCCTCCGATGGCGCCTCCAGCGCTCTGATA
CTCACGCAGGCTAGCGTGAGGGCGCACGGGCATGCCAGGGTGGACCCGCG
CTGGACCAATCTGCCAAAGCCGCTCAGGACCTTGTATCAGCAGGACAAGG
AGGAACCTGCCGGCGATAGCAGCAGCCCTTCGGTGCGCCGGCGAAGACCC
AGGTACAAGGACCTGGACAACGCCAACACGGTGTGCATCTTCAGCACGGA
CTGCGTCGTCCTGCCCCTCGACGACGACGACAACAGCAGCAGCACTCATC
CCGTGGACACCGTCAATGGCGACGGCGACGGGGCCGCCGACGCAGCGCCG
CCGCCGCGGCAGCAGCAGCAGCCGCGGCCGTCGAAGACCTACGCGTACTC
GTTCACGTTCCGCGCGCCGCGCGACGTGCCGCCGTCCTTCAAGGGCGTCG
TCGCGCGCTACCTGTACTTTGCGACCGTCACGGTGACGCTCGCGCGGCAC
GCGGCGTCGCCCGCCGCGGGCTGGGGCGTCGGGCGGCTGCTCGGCGCGGT
GCGGCGGCGCAGCAGCGGCGGCAGCGGCAGCGGCAACGGCGGCGCCGAGG
CGGTGACGGTCACGACGGAGGAGCACAGCCTGCACCTGCCGTTTGCGCTG
CTGGCGACGGGGCGGCCGCCGCGGGAGGCGCCCGCGCTGCCGCCGGACGT
GTGCTGGGCCACGCTGCAGGCGCAGCTGGAGCACGCATCGGAGGCGGAAG
ACGGCGCGCAAGGCAGCAGCGGCAGCGGCAGCGCCAACGCTGGGCAGCGC
CCGCTGCTGCTGGCACGCACGCACGCGTCCGTCTGGGACCTCCAGGGCAA
GGCGCGCGGCGGCACGGGCGGGCACCCGCTTGTCTTTGGCATCCGCAGCG
GCGACGCGCGCATCCTGCGCTTCATGCTCTACAAGCGCGAGTTTTGGCCG
GGCGACCTCGTGCTGGGGACGTTTGACATGGCGGGCGCGGACTGCACGTG
CCACCAGATCTGCGCGTGCCTGCTGGTCGAGGAGCGCGCCGCCGCCGCCG
CATGGCACGGAGACGGCGGCGCCGCTGCCGCCGCCGGCAGGGGCGGCGGC
AGCGCAGCGGCGGCGGCGGAGGCGGCGGCAACCCAGGCGCACCAGCGCAT
CGTGGACGTGTTCCACGAGCTCGGGCCGTGCGCGCAGACGACGAGCATGG
CGCTGGCGCTGCCGGCGGACGCACCGCTGTCGTTCGCCACGGACCTCGAC
GCGGTGCGCTGGCTGCTGCGCTTCGAGTTCACCATTGGCGCCGCGCGCAC
CGCCGCCGCGCCGCCGTCCGCTGCGCCGGCGGCGGCGGCGGACAACCCCA
CGCCGCGCGGCGGCGCGCGGCCCAGCCGCACCAATTCGATTCTGTCGATC
GGCGGGCCCGGCGTGCTCGCGGGTGTGAGCGAGCCCGCTGCGGCGGCGGC
GGCGCCGGAGCAGTACCGCGTGCTGCGGTGGGAGGTGCCGATAGCGGTGG
TGACGCCGGCGGCGTCGGCGGAGGCGCCGCGGCCGCCGTTTGCCAGTCAG
GAGGGGGCCGTGGAGCGCACCGCCTTTTGCTGACGGACGGCCTTTTGTCG
CGCTGCACTCGTGTAGTTGTTACTGTAATGTGTACAGACGAAGGACTGCC
AGTGGGCTGTTGAACCG
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protein sequence of jgi.p|Trimin1|352467

>Trimin1|352467|estExt_Genemark1.C_Ctg_1190072 ID=Trimin1|352467|estExt_Genemark1.C_Ctg_1190072|Name=jgi.p|Trimin1|352467|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=561bp
MGKGAAQPAAPGRCQITCRLHKGNYIGGEQVAGFLSITTPASDGASSALI
LTQASVRAHGHARVDPRWTNLPKPLRTLYQQDKEEPAGDSSSPSVRRRRP
RYKDLDNANTVCIFSTDCVVLPLDDDDNSSSTHPVDTVNGDGDGAADAAP
PPRQQQQPRPSKTYAYSFTFRAPRDVPPSFKGVVARYLYFATVTVTLARH
AASPAAGWGVGRLLGAVRRRSSGGSGSGNGGAEAVTVTTEEHSLHLPFAL
LATGRPPREAPALPPDVCWATLQAQLEHASEAEDGAQGSSGSGSANAGQR
PLLLARTHASVWDLQGKARGGTGGHPLVFGIRSGDARILRFMLYKREFWP
GDLVLGTFDMAGADCTCHQICACLLVEERAAAAAWHGDGGAAAAAGRGGG
SAAAAAEAAATQAHQRIVDVFHELGPCAQTTSMALALPADAPLSFATDLD
AVRWLLRFEFTIGAARTAAAPPSAAPAAAADNPTPRGGARPSRTNSILSI
GGPGVLAGVSEPAAAAAAPEQYRVLRWEVPIAVVTPAASAEAPRPPFASQ
EGAVERTAFC*
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mRNA from alignment at Contig_119:423704..427478+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_10668 ID=mRNA_10668|Name=jgi.p|Trimin1|352467|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3775bp|location=Sequence derived from alignment at Contig_119:423704..427478+ (Tribonema minus UTEX_B_3156 )
ATGGGCAAGGGAGCAGCTCAGCCAGCAGCCCCAGGGCGGTGCCAGATCAC
CTGCAGGCTGCACAAGGGCAACTACATTGGCGGCGAGCAGGTCGCAGGAT
TTCTGTCCATCACAACGCCTGCCTCCGATGGCGCCTCCAGCGCTCTGATA
CTCACGCAGGTGCATTCTCAGCTTGCCATGCAAGAGATTGGATGTAGAGC
GCTGTCATGCGGGTTTCAAAAAGTACGAAAGGGTGATGGCGTTGTCCTGG
GTGCACCGTCAGAAGTCCTCGACTTTCACTGGCTGCAGGATTCGCGCGTG
ACGGCTCATCTAAGTATTGTGGACGGCGCCGATGTCGTACACAGCCGCCC
TGTGTTGTAGTTGTAGGCCGTCGTCGTAATGTCAACACCGAAGGCACCAG
CAGCAGCAGCAGCGGCTGCGGCATCGTCCAGGGAGTGAACATAAAAGTTT
CATGACGTGCAATGTCTGCATACGACCATCGTCCTCACCGACGAAGATCA
GGCAGCGTATGATGAAACTGCGAGTCAGGACACCTTCATGTGTACTTCAT
GTCCTGAGTCGCTATTCTTCGATGTTTTCTTTGTTGCTGACTTCTTGGTA
CGCAGCCCAATAGAAATAGCAAGTCAGGACATGAAAGTGAACATGAATGT
ATCTTGGCTCGCAAATTCTTCTTACGCTTCCCAATTTCGTCGGTGATAAC
GATCCTCTCTCCGCACACGGGGATGGGTGTAAACGAAACTTTAAGTCAAG
ATACCTTCGCATGTTCACCCACTTGGAGATCGCCGCAGCTGCTGCCGCAG
CCGCTCGTGCTTTTGTTGCTGATACCACGACGACAGCCTACGACTACATC
ACAGGGCGGCGGCTGTATACGACAGCACTGTCCACCTCCACCATACCTGA
GCACGAGCCGTCGCGCGCGAATCCTGCAGCCAGTGAAGGCCAACAACTTC
TGACGGTGCACCTGGCTTTCACCCAGGACATGCGCGAATCCTGCAAGCAG
CGAGGGTCAAGGACTTCTGACGGTGCACCTGGCTTGTTGCACCCAAGGAA
ACGCGCAAACGTGCAGCGGGACTCGTTAGGCCAACGTTGTGTGTGTTTGC
TGCGGCAGGCTAGCGTGAGGGCGCACGGGCATGCCAGGGTGGACCCGCGC
TGGACCAATCTGCCAAAGCCGCTCAGGACCTTGTATCAGCAGGACAAGGA
GGAACCTGCCGGCGATAGCAGCAGCCCTTCGGTGCGCCGGCGAAGACCCA
GGTGAGCAAGCTGTGCGTCGTTGATGTCGAGGACCGCTCCAAACAAGTGC
GTTGCTGACCACAGGCATGCGATGCATACGCAACCTGCAGTGCGTGAATG
ATGTGCTGCCTCTTTTTCTGCAAGTCACTAGCGCCTGCGCCGCAACTGCT
GCTTTTTGCAGACTTGCACCAAACTTGTTTGGCGGGCCTTGAGATGATTG
CTGCGCTGGGCTTCACGTGCGTCAGCAGGCACTGTGAAGTTCGCCTTTCA
TGCTTTTCATACCCTCAAAGCAACTGGCATGGAAGTATCGTTTTTGAACT
CTGCATTTTTGGTAGCCAGTGTGATCAACTGCTGTGTATATGCTTGTGGT
GCTGTGAAGCCTGTCGCCAACACATTTGCTTGTAGATGGTGTGCTTCTTG
GCCTGGACACCACCATATGGATTCGGGGTTTGGCTTGGGGTCTAGGATTA
GCGTCAGGGTAAGGTTGAGGGTAGATCACGCCCCCCACACACCCTTTGAG
TTTCTGTTTGTTTTGTCCGATGTGCAGCTTGCTTGATGGACAACACAAGC
AGCGCATTGACCTCGTGCCGATCTCGTGGCGCCGCACGCAGGTACAAGGA
CCTGGACAACGCCAACACGGTGTGCATCTTCAGCACGGACTGCGTCGTCC
TGCCCCTCGACGACGACGACAACAGCAGCAGCACTCATCCCGTGGACACC
GTCAATGGCGACGGCGACGGGGCCGCCGACGCAGCGCCGCCGCCGCGGCA
GCAGCAGCAGCCGCGGCCGTCGAAGACCTACGCGTACTCGTTCACGTTCC
GCGCGCCGCGCGACGTGCCGCCGTCCTTCAAGGGCGTCGTCGCGCGCTAC
CTGTACTTTGCGACCGTCACGGTGACGCTCGCGCGGCACGCGGCGTCGCC
CGCCGCGGGCTGGGGCGTCGGGCGGCTGCTCGGCGCGGTGCGGCGGCGCA
GCAGCGGCGGCAGCGGCAGCGGCAACGGCGGCGCCGAGGCGGTGACGGTC
ACGACGGAGGAGCACAGCCTGCACCTGCCGTTTGCGCTGCTGGCGACGGG
GCGGCCGCCGCGGGAGGCGCCCGCGCTGCCGCCGGACGTGTGCTGGGCCA
CGCTGCAGGTGCGGCCGCTGCTCTGCTGCTGCTACGGACAGTATCTGCAG
TGTTTGCCTGCATGCAACCGGGGCGTGGTGTCAATGTTGCGCTGGCAGTA
CACGGGGGGGGCTGTTGTATGCAGCAGCTCATCAGCGGTGCAGGGCTGCG
TCTGCACAGTAGGATGGTGGAGCTTGCAGCAAGCGCGCTACCCCAAATTG
GCCTGCCAGGGCAGCGACTACAGTTTCCTACGCTCCGCGTCACCTTGTGG
CAGAGCCCAATGAATCTCACCGAGGGTTTGCGCAGTGAGAGTTGCTGGCG
ATGGCCATATCTGCACCTGATGTTGGCGTTGAAACTAGGCGATGCCATCG
CTGTTTGGTGCCGGATCATGACACCATGTACACAGGCTTCACGGTGCCAC
TTTTCTTGACAGTTCTGTTGTTGACGCTGCAGCAATATGCGTGCTGCCGC
CGCTGCTGCCGACCACGCCACCCGCAGGCGCAGCTGGAGCACGCATCGGA
GGCGGAAGACGGCGCGCAAGGCAGCAGCGGCAGCGGCAGCGCCAACGCTG
GGCAGCGCCCGCTGCTGCTGGCACGCACGCACGCGTCCGTCTGGGACCTC
CAGGGCAAGGCGCGCGGCGGCACGGGCGGGCACCCGCTTGTCTTTGGCAT
CCGCAGCGGCGACGCGCGCATCCTGCGCTTCATGCTCTACAAGCGCGAGT
TTTGGCCGGGCGACCTCGTGCTGGGGACGTTTGACATGGCGGGCGCGGAC
TGCACGTGCCACCAGATCTGCGCGTGCCTGCTGGTCGAGGAGCGCGCCGC
CGCCGCCGCATGGCACGGAGACGGCGGCGCCGCTGCCGCCGCCGGCAGGG
GCGGCGGCAGCGCAGCGGCGGCGGCGGAGGCGGCGGCAACCCAGGCGCAC
CAGCGCATCGTGGACGTGTTCCACGAGCTCGGGCCGTGCGCGCAGACGAC
GAGCATGGCGCTGGCGCTGCCGGCGGACGCACCGCTGTCGTTCGCCACGG
ACCTCGACGCGGTGCGCTGGCTGCTGCGCTTCGAGTTCACCATTGGCGCC
GCGCGCACCGCCGCCGCGCCGCCGTCCGCTGCGCCGGCGGCGGCGGCGGA
CAACCCCACGCCGCGCGGCGGCGCGCGGCCCAGCCGCACCAATTCGATTC
TGTCGATCGGCGGGCCCGGCGTGCTCGCGGGTGTGAGCGAGCCCGCTGCG
GCGGCGGCGGCGCCGGAGCAGTACCGCGTGCTGCGGTGGGAGGTGCCGAT
AGCGGTGGTGACGCCGGCGGCGTCGGCGGAGGCGCCGCGGCCGCCGTTTG
CCAGTCAGGAGGGGGCCGTGGAGCGCACCGCCTTTTGCTGACGGACGGCC
TTTTGTCGCGCTGCACTCGTGTAGTTGTTACTGTAATGTGTACAGACGAA
GGACTGCCAGTGGGCTGTTGAACCG
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Coding sequence (CDS) from alignment at Contig_119:423704..427478+

>mRNA_10668 ID=mRNA_10668|Name=jgi.p|Trimin1|352467|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1683bp|location=Sequence derived from alignment at Contig_119:423704..427478+ (Tribonema minus UTEX_B_3156 )
ATGGGCAAGGGAGCAGCTCAGCCAGCAGCCCCAGGGCGGTGCCAGATCAC
CTGCAGGCTGCACAAGGGCAACTACATTGGCGGCGAGCAGGTCGCAGGAT
TTCTGTCCATCACAACGCCTGCCTCCGATGGCGCCTCCAGCGCTCTGATA
CTCACGCAGGCTAGCGTGAGGGCGCACGGGCATGCCAGGGTGGACCCGCG
CTGGACCAATCTGCCAAAGCCGCTCAGGACCTTGTATCAGCAGGACAAGG
AGGAACCTGCCGGCGATAGCAGCAGCCCTTCGGTGCGCCGGCGAAGACCC
AGGTACAAGGACCTGGACAACGCCAACACGGTGTGCATCTTCAGCACGGA
CTGCGTCGTCCTGCCCCTCGACGACGACGACAACAGCAGCAGCACTCATC
CCGTGGACACCGTCAATGGCGACGGCGACGGGGCCGCCGACGCAGCGCCG
CCGCCGCGGCAGCAGCAGCAGCCGCGGCCGTCGAAGACCTACGCGTACTC
GTTCACGTTCCGCGCGCCGCGCGACGTGCCGCCGTCCTTCAAGGGCGTCG
TCGCGCGCTACCTGTACTTTGCGACCGTCACGGTGACGCTCGCGCGGCAC
GCGGCGTCGCCCGCCGCGGGCTGGGGCGTCGGGCGGCTGCTCGGCGCGGT
GCGGCGGCGCAGCAGCGGCGGCAGCGGCAGCGGCAACGGCGGCGCCGAGG
CGGTGACGGTCACGACGGAGGAGCACAGCCTGCACCTGCCGTTTGCGCTG
CTGGCGACGGGGCGGCCGCCGCGGGAGGCGCCCGCGCTGCCGCCGGACGT
GTGCTGGGCCACGCTGCAGGCGCAGCTGGAGCACGCATCGGAGGCGGAAG
ACGGCGCGCAAGGCAGCAGCGGCAGCGGCAGCGCCAACGCTGGGCAGCGC
CCGCTGCTGCTGGCACGCACGCACGCGTCCGTCTGGGACCTCCAGGGCAA
GGCGCGCGGCGGCACGGGCGGGCACCCGCTTGTCTTTGGCATCCGCAGCG
GCGACGCGCGCATCCTGCGCTTCATGCTCTACAAGCGCGAGTTTTGGCCG
GGCGACCTCGTGCTGGGGACGTTTGACATGGCGGGCGCGGACTGCACGTG
CCACCAGATCTGCGCGTGCCTGCTGGTCGAGGAGCGCGCCGCCGCCGCCG
CATGGCACGGAGACGGCGGCGCCGCTGCCGCCGCCGGCAGGGGCGGCGGC
AGCGCAGCGGCGGCGGCGGAGGCGGCGGCAACCCAGGCGCACCAGCGCAT
CGTGGACGTGTTCCACGAGCTCGGGCCGTGCGCGCAGACGACGAGCATGG
CGCTGGCGCTGCCGGCGGACGCACCGCTGTCGTTCGCCACGGACCTCGAC
GCGGTGCGCTGGCTGCTGCGCTTCGAGTTCACCATTGGCGCCGCGCGCAC
CGCCGCCGCGCCGCCGTCCGCTGCGCCGGCGGCGGCGGCGGACAACCCCA
CGCCGCGCGGCGGCGCGCGGCCCAGCCGCACCAATTCGATTCTGTCGATC
GGCGGGCCCGGCGTGCTCGCGGGTGTGAGCGAGCCCGCTGCGGCGGCGGC
GGCGCCGGAGCAGTACCGCGTGCTGCGGTGGGAGGTGCCGATAGCGGTGG
TGACGCCGGCGGCGTCGGCGGAGGCGCCGCGGCCGCCGTTTGCCAGTCAG
GAGGGGGCCGTGGAGCGCACCGCCTTTTGCTGA
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