Trimin1|352415|estExt_Genemark1.C_Ctg_1180048 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352415
Unique NameTrimin1|352415|estExt_Genemark1.C_Ctg_1180048
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length346
Homology
BLAST of jgi.p|Trimin1|352415 vs. uniprot
Match: A0A836CMW6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMW6_9STRA)

HSP 1 Score: 664 bits (1712), Expect = 1.740e-240
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0
Query:    1 MELQWLRYLCEVRQTAGLAILFGSMAVLSACIGISEVTDIGQKWAGNSLTFPPIALLLANLTQALFGLSNIGVGLAWLVSGKGSVGWSFFSMVITYAAWFPFLTVISLISFTGDNYPQAPQPFIPMTLMPTTTDVNAVTALAALGFIAYGANLVGALTFCATKLFRAHSVAGVTAYTGAYYASRQTYYGFLTLLAGVVQLALGAYVQDNFGSDRLLEPIAAGPFTVTYSQASIAMGVLVMFQGALLMARSYMSKDSKVATGAAFDWWSVFAYVTVLAVQVLTQVAVAPAPAAGRASTVFETLALAVFPVYLDIKSRSAPEAFPSDFYSLEEAGPAKSVEEHMPSA 345
            MELQWLRYLCEVRQTAGLAILFGSMAVLSACIGISEVTDIGQKWAGNSLTFPPIALLLANLTQALFGLSNIGVGLAWLVSGKGSVGWSFFSMVITYAAWFPFLTVISLISFTGDNYPQAPQPFIPMTLMPTTTDVNAVTALAALGFIAYGANLVGALTFCATKLFRAHSVAGVTAYTGAYYASRQTYYGFLTLLAGVVQLALGAYVQDNFGSDRLLEPIAAGPFTVTYSQASIAMGVLVMFQGALLMARSYMSKDSKVATGAAFDWWSVFAYVTVLAVQVLTQVAVAPAPAAGRASTVFETLALAVFPVYLDIKSRSAPEAFPSDFYSLEEAGPAKSVEEHMPSA
Sbjct:    1 MELQWLRYLCEVRQTAGLAILFGSMAVLSACIGISEVTDIGQKWAGNSLTFPPIALLLANLTQALFGLSNIGVGLAWLVSGKGSVGWSFFSMVITYAAWFPFLTVISLISFTGDNYPQAPQPFIPMTLMPTTTDVNAVTALAALGFIAYGANLVGALTFCATKLFRAHSVAGVTAYTGAYYASRQTYYGFLTLLAGVVQLALGAYVQDNFGSDRLLEPIAAGPFTVTYSQASIAMGVLVMFQGALLMARSYMSKDSKVATGAAFDWWSVFAYVTVLAVQVLTQVAVAPAPAAGRASTVFETLALAVFPVYLDIKSRSAPEAFPSDFYSLEEAGPAKSVEEHMPSA 345          
BLAST of jgi.p|Trimin1|352415 vs. uniprot
Match: D8LES9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LES9_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 3.550e-51
Identity = 114/330 (34.55%), Postives = 184/330 (55.76%), Query Frame = 0
Query:   11 EVRQTAGLAILFGSMAVLSACIGISEVTDIGQKWAGNSLTFPPIALLLANLTQALFGLSNIGVGLAWLVSGKGSVGWSFFSMVITYAAWFPFLTVISLISFTGDNYP----QAPQPFIPMTLMPTTTDVNAVTALAALGFIAYGANLVGALTFCATKLFRAHSVAGVTAYTGAYYASRQTYYGFLTLLAGVVQLALGAYVQDNFGSDRLLEPIAAGPFTVTYSQASIAMGVLVMFQGALLMARSYM-----SKDSKVATGAAFDW--WSVFAYVTVLAVQVLTQVAVAPAPAAGRASTVFETLALAVFPVYLDIKSRSAPEAFPSDFYSL 329
            ++  T+GL + +G + ++   + ++  +  G  W+G+   FPPIA+LLA LT  LFGL ++ +G  ++ S  GS   S F + IT AAWFPFLT ++LI+F  D+        P   +  T+  +  ++N++  +  LGF  Y   ++GALTF   K++R     G + Y+  YY SR  YYGFL+L+ G +Q+ALG++V+  FG  +L  P+ +GPF + + + SI +GV  +  G  ++ RS       S  +K A    F    WSVF  +  +  QVL QV++A +  A  A  +   +  A+FP+YLD+ S + PE    D +S+
Sbjct:   20 DLTTTSGLILAYGIIVIIGGTVDLTAASAKGVDWSGSDGVFPPIAILLAQLTVTLFGLVSMFLGFQYVASRWGSKVTSLFGLGITLAAWFPFLTTVALIAFQADHGNVGGGAGPLQILHPTISVSQGEINSIALMGILGFWGYAGTVIGALTFLQWKMYRFFQ-GGASTYSATYYRSRLGYYGFLSLMVGALQVALGSFVEGMFGWGQLPSPVVSGPFFILWPELSITVGVCQVLFGFYILYRSTTPGVGPSTGNKDAGMFKFQVVAWSVF--LISMGAQVLGQVSLAAS--AMPALFIRNVIGFALFPIYLDVLSHTTPENVTPDMFSM 344          
BLAST of jgi.p|Trimin1|352415 vs. uniprot
Match: D8LET4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LET4_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 2.280e-36
Identity = 107/329 (32.52%), Postives = 159/329 (48.33%), Query Frame = 0
Query:    7 RYLCEVRQTAGLAILFGSMAVLSACIGISEVTDIGQKWAGNSLTFPPIALLLANLTQALFGLSNIGVGLAWLVSGKGSVGWSFFSMVITYAAWFPFLTVISLISFTGDNYPQAPQPFIPMTLMPTTTDVNAVTALAALGFIAYGANLVGALTFCATKLFRAHSVAGVTAYTGAYYASRQTYYGFLTLLAGVVQLALGAYVQDNFGSDRLLEPIAA----GPFTVTYSQASIAMGVLVMFQGALLMARSYMSKDSKVATGA----AFDWWSVFAYVTVLAVQVLTQVAVAPAP-------AAGRASTVFETLALAVFPVYLDIKSRSAPE 320
            RY  E+  TAG+  LFG + ++     +   T  GQ W+GNS  FPP+   LA L Q  F + ++ VG  +LV G     W+   M+  + ++F   T    +++TG    +    FIP     +T++  +V ++ A+ ++AY  N   AL     K+F   S   V  +   +Y +   + G LTLLAG VQLALGAYV D    DRL  P+ A    GP  VTYS+ +IA G   +  G  +M R+     S     A    AF + + F  V  + +QVL+QV ++          A   A  V   + L +FP+YLD    + PE
Sbjct:   18 RYTKEMSVTAGMLCLFGFINLVPGVYDLCLSTIDGQDWSGNSDVFPPVVRHLAALIQITFSIVSMAVGFQYLVCGGACSHWT---MISLFCSFFSLFTFAVSVAYTGFLSAKESFDFIPSEYGASTSENRSVASMIAIAYVAYAINNFFALVHLNYKMFMYQSDQWV-GFNRGFYKTALMFVGLLTLLAGTVQLALGAYVFDKVDEDRLSSPLGAIFLSGPLLVTYSRLAIAFGAFQLVLGCYIMVRATQKPSSGSGENAKGLQAFQFAAWFVLVLSICIQVLSQVTMSSTSTNIVDRYAGFAAQAVAYVVGLGLFPMYLDAMYYTTPE 342          
BLAST of jgi.p|Trimin1|352415 vs. uniprot
Match: A0A7S1GQW8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GQW8_CYCTE)

HSP 1 Score: 79.7 bits (195), Expect = 3.660e-14
Identity = 52/148 (35.14%), Postives = 77/148 (52.03%), Query Frame = 0
Query:  184 RQTYYGFLTLLAGVVQLALGAYVQDNFGSDRLLEPIAAGPFTVTYSQASIAMGVLVMFQGALLMARSYMSKDSKVATGAAFDWWSVFAYVTVLAVQVLTQVAVAPAPA-AGRA-STVFETLALAVFPVYLDIKSRSAPEAFPSDFYSL 329
            R  +Y FL +L G VQL LGAY  +NFGS  L   ++   FT+++ + S+ +G++ +  G     RS +     V    +F +  +F Y   L + +L Q++  P  A AG A S    TL   V P YLD K R+ P   PS++Y L
Sbjct:    2 RLGFYCFLIILVGFVQLLLGAYCLNNFGSGPLKPAVSVAMFTISFPEISVFVGLVYILNGMYGFVRS-LGVVGAVEYDHSFQYGLIFQYWCTLVLMILVQISYLPGGAMAGAAPSRACLTLGAHVLPAYLDFKMRTTPHVLPSNYYGL 148          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352415 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A836CMW6_9STRA1.740e-240100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LES9_ECTSI3.550e-5134.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LET4_ECTSI2.280e-3632.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1GQW8_CYCTE3.660e-1435.14Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..31
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_118contigContig_118:398582..401953 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352415mRNA_13274Tribonema minus UTEX_B_3156 mRNAContig_118 398463..402076 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352415|estExt_Genemark1.C_Ctg_1180048 ID=Trimin1|352415|estExt_Genemark1.C_Ctg_1180048|Name=jgi.p|Trimin1|352415|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=346bp
MELQWLRYLCEVRQTAGLAILFGSMAVLSACIGISEVTDIGQKWAGNSLT
FPPIALLLANLTQALFGLSNIGVGLAWLVSGKGSVGWSFFSMVITYAAWF
PFLTVISLISFTGDNYPQAPQPFIPMTLMPTTTDVNAVTALAALGFIAYG
ANLVGALTFCATKLFRAHSVAGVTAYTGAYYASRQTYYGFLTLLAGVVQL
ALGAYVQDNFGSDRLLEPIAAGPFTVTYSQASIAMGVLVMFQGALLMARS
YMSKDSKVATGAAFDWWSVFAYVTVLAVQVLTQVAVAPAPAAGRASTVFE
TLALAVFPVYLDIKSRSAPEAFPSDFYSLEEAGPAKSVEEHMPSA*
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