mRNA_13274 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|352415
Unique Name	mRNA_13274
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|352415 vs. uniprot
Match: A0A836CMW6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMW6_9STRA)

HSP 1 Score: 664 bits (1714), Expect = 2.080e-239
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 1

Query:  124 MELQWLRYLCEVRQTAGLAILFGSMAVLSACIGISEVTDIGQKWAGNSLTFPPIALLLANLTQALFGLSNIGVGLAWLVSGKGSVGWSFFSMVITYAAWFPFLTVISLISFTGDNYPQAPQPFIPMTLMPTTTDVNAVTALAALGFIAYGANLVGALTFCATKLFRAHSVAGVTAYTGAYYASRQTYYGFLTLLAGVVQLALGAYVQDNFGSDRLLEPIAAGPFTVTYSQASIAMGVLVMFQGALLMARSYMSKDSKVATGAAFDWWSVFAYVTVLAVQVLTQVAVAPAPAAGRASTVFETLALAVFPVYLDIKSRSAPEAFPSDFYSLEEAGPAKSVEEHMPSA 1158
            MELQWLRYLCEVRQTAGLAILFGSMAVLSACIGISEVTDIGQKWAGNSLTFPPIALLLANLTQALFGLSNIGVGLAWLVSGKGSVGWSFFSMVITYAAWFPFLTVISLISFTGDNYPQAPQPFIPMTLMPTTTDVNAVTALAALGFIAYGANLVGALTFCATKLFRAHSVAGVTAYTGAYYASRQTYYGFLTLLAGVVQLALGAYVQDNFGSDRLLEPIAAGPFTVTYSQASIAMGVLVMFQGALLMARSYMSKDSKVATGAAFDWWSVFAYVTVLAVQVLTQVAVAPAPAAGRASTVFETLALAVFPVYLDIKSRSAPEAFPSDFYSLEEAGPAKSVEEHMPSA
Sbjct:    1 MELQWLRYLCEVRQTAGLAILFGSMAVLSACIGISEVTDIGQKWAGNSLTFPPIALLLANLTQALFGLSNIGVGLAWLVSGKGSVGWSFFSMVITYAAWFPFLTVISLISFTGDNYPQAPQPFIPMTLMPTTTDVNAVTALAALGFIAYGANLVGALTFCATKLFRAHSVAGVTAYTGAYYASRQTYYGFLTLLAGVVQLALGAYVQDNFGSDRLLEPIAAGPFTVTYSQASIAMGVLVMFQGALLMARSYMSKDSKVATGAAFDWWSVFAYVTVLAVQVLTQVAVAPAPAAGRASTVFETLALAVFPVYLDIKSRSAPEAFPSDFYSLEEAGPAKSVEEHMPSA 345

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BLAST of jgi.p|Trimin1|352415 vs. uniprot
Match: D8LES9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LES9_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 4.240e-50
Identity = 114/330 (34.55%), Postives = 184/330 (55.76%), Query Frame = 1

Query:  154 EVRQTAGLAILFGSMAVLSACIGISEVTDIGQKWAGNSLTFPPIALLLANLTQALFGLSNIGVGLAWLVSGKGSVGWSFFSMVITYAAWFPFLTVISLISFTGDNYP----QAPQPFIPMTLMPTTTDVNAVTALAALGFIAYGANLVGALTFCATKLFRAHSVAGVTAYTGAYYASRQTYYGFLTLLAGVVQLALGAYVQDNFGSDRLLEPIAAGPFTVTYSQASIAMGVLVMFQGALLMARSYM-----SKDSKVATGAAFDW--WSVFAYVTVLAVQVLTQVAVAPAPAAGRASTVFETLALAVFPVYLDIKSRSAPEAFPSDFYSL 1110
            ++  T+GL + +G + ++   + ++  +  G  W+G+   FPPIA+LLA LT  LFGL ++ +G  ++ S  GS   S F + IT AAWFPFLT ++LI+F  D+        P   +  T+  +  ++N++  +  LGF  Y   ++GALTF   K++R     G + Y+  YY SR  YYGFL+L+ G +Q+ALG++V+  FG  +L  P+ +GPF + + + SI +GV  +  G  ++ RS       S  +K A    F    WSVF  +  +  QVL QV++A +  A  A  +   +  A+FP+YLD+ S + PE    D +S+
Sbjct:   20 DLTTTSGLILAYGIIVIIGGTVDLTAASAKGVDWSGSDGVFPPIAILLAQLTVTLFGLVSMFLGFQYVASRWGSKVTSLFGLGITLAAWFPFLTTVALIAFQADHGNVGGGAGPLQILHPTISVSQGEINSIALMGILGFWGYAGTVIGALTFLQWKMYRFFQ-GGASTYSATYYRSRLGYYGFLSLMVGALQVALGSFVEGMFGWGQLPSPVVSGPFFILWPELSITVGVCQVLFGFYILYRSTTPGVGPSTGNKDAGMFKFQVVAWSVF--LISMGAQVLGQVSLAAS--AMPALFIRNVIGFALFPIYLDVLSHTTPENVTPDMFSM 344

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BLAST of jgi.p|Trimin1|352415 vs. uniprot
Match: D8LET4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LET4_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 1.870e-35
Identity = 107/329 (32.52%), Postives = 159/329 (48.33%), Query Frame = 1

Query:  142 RYLCEVRQTAGLAILFGSMAVLSACIGISEVTDIGQKWAGNSLTFPPIALLLANLTQALFGLSNIGVGLAWLVSGKGSVGWSFFSMVITYAAWFPFLTVISLISFTGDNYPQAPQPFIPMTLMPTTTDVNAVTALAALGFIAYGANLVGALTFCATKLFRAHSVAGVTAYTGAYYASRQTYYGFLTLLAGVVQLALGAYVQDNFGSDRLLEPIAA----GPFTVTYSQASIAMGVLVMFQGALLMARSYMSKDSKVATGA----AFDWWSVFAYVTVLAVQVLTQVAVAPAP-------AAGRASTVFETLALAVFPVYLDIKSRSAPE 1083
            RY  E+  TAG+  LFG + ++     +   T  GQ W+GNS  FPP+   LA L Q  F + ++ VG  +LV G     W+   M+  + ++F   T    +++TG    +    FIP     +T++  +V ++ A+ ++AY  N   AL     K+F   S   V  +   +Y +   + G LTLLAG VQLALGAYV D    DRL  P+ A    GP  VTYS+ +IA G   +  G  +M R+     S     A    AF + + F  V  + +QVL+QV ++          A   A  V   + L +FP+YLD    + PE
Sbjct:   18 RYTKEMSVTAGMLCLFGFINLVPGVYDLCLSTIDGQDWSGNSDVFPPVVRHLAALIQITFSIVSMAVGFQYLVCGGACSHWT---MISLFCSFFSLFTFAVSVAYTGFLSAKESFDFIPSEYGASTSENRSVASMIAIAYVAYAINNFFALVHLNYKMFMYQSDQWV-GFNRGFYKTALMFVGLLTLLAGTVQLALGAYVFDKVDEDRLSSPLGAIFLSGPLLVTYSRLAIAFGAFQLVLGCYIMVRATQKPSSGSGENAKGLQAFQFAAWFVLVLSICIQVLSQVTMSSTSTNIVDRYAGFAAQAVAYVVGLGLFPMYLDAMYYTTPE 342

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BLAST of jgi.p|Trimin1|352415 vs. uniprot
Match: A0A7S1GQW8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GQW8_CYCTE)

HSP 1 Score: 79.7 bits (195), Expect = 6.730e-14
Identity = 52/148 (35.14%), Postives = 77/148 (52.03%), Query Frame = 1

Query:  673 RQTYYGFLTLLAGVVQLALGAYVQDNFGSDRLLEPIAAGPFTVTYSQASIAMGVLVMFQGALLMARSYMSKDSKVATGAAFDWWSVFAYVTVLAVQVLTQVAVAPAPA-AGRA-STVFETLALAVFPVYLDIKSRSAPEAFPSDFYSL 1110
            R  +Y FL +L G VQL LGAY  +NFGS  L   ++   FT+++ + S+ +G++ +  G     RS +     V    +F +  +F Y   L + +L Q++  P  A AG A S    TL   V P YLD K R+ P   PS++Y L
Sbjct:    2 RLGFYCFLIILVGFVQLLLGAYCLNNFGSGPLKPAVSVAMFTISFPEISVFVGLVYILNGMYGFVRS-LGVVGAVEYDHSFQYGLIFQYWCTLVLMILVQISYLPGGAMAGAAPSRACLTLGAHVLPAYLDFKMRTTPHVLPSNYYGL 148

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BLAST of jgi.p|Trimin1|352415 vs. uniprot
Match: A0A836CNT9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNT9_9STRA)

HSP 1 Score: 395 bits (1015), Expect = 3.270e-139
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 2

Query:    8 MSAMAIKFTLGHSFLACGQCSRNPSAPSPKALARFHRGDIYDLPPQQQLIYDALYTADAEDVQKDRAVRKLVRQILASVGTQTSQGAGIDAGNDGEQHTYPARVQTALSTLSFLEDLGLSQDQIRSIRNRAPTLLQCGVEGPTGLRAKCEYFQTALAMSRQQLLGLVNKAPATMNLSLLKNIKPKVDYMCEVYSGC 595
            MSAMAIKFTLGHSFLACGQCSRNPSAPSPKALARFHRGDIYDLPPQQQLIYDALYTADAEDVQKDRAVRKLVRQILASVGTQTSQGAGIDAGNDGEQHTYPARVQTALSTLSFLEDLGLSQDQIRSIRNRAPTLLQCGVEGPTGLRAKCEYFQTALAMSRQQLLGLVNKAPATMNLSLLKNIKPKVDYMCEVYSGC
Sbjct:    1 MSAMAIKFTLGHSFLACGQCSRNPSAPSPKALARFHRGDIYDLPPQQQLIYDALYTADAEDVQKDRAVRKLVRQILASVGTQTSQGAGIDAGNDGEQHTYPARVQTALSTLSFLEDLGLSQDQIRSIRNRAPTLLQCGVEGPTGLRAKCEYFQTALAMSRQQLLGLVNKAPATMNLSLLKNIKPKVDYMCEVYSGC 196

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|352415 vs. uniprot
BLAST of jgi.p|Trimin1|352415 vs. uniprot

BLAST of jgi.p|Trimin1|352415 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A836CMW6_9STRA	2.080e-239	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D8LES9_ECTSI	4.240e-50	34.55	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LET4_ECTSI	1.870e-35	32.52	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A7S1GQW8_CYCTE	6.730e-14	35.14	Hypothetical protein n=1 Tax=Cyclophora tenuis Tax...	[more]

BLAST of jgi.p|Trimin1|352415 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CNT9_9STRA	3.270e-139	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_118	contig	Contig_118:398463..402076 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|352415\|estExt_Genemark1.C_Ctg_1180048
Max annot lvl	2759\|Eukaryota
EggNOG OGs	2E0GM@1\|root,2S7X1@2759\|Eukaryota
Evalue	5.82e-52
Seed ortholog	2880.D8LES9
Hectar predicted targeting category	signal anchor
TranscriptId	352737
Track	FilteredModels1
ProteinId	352415

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352415	gene_13274	Tribonema minus UTEX_B_3156	gene	Contig_118 398463..402076 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352415	Trimin1\|352415\|estExt_Genemark1.C_Ctg_1180048	Tribonema minus UTEX_B_3156	polypeptide	Contig_118 398582..401953 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_13274_7	exon_13274_7	Tribonema minus UTEX_B_3156	exon	Contig_118 398463..398677 -
exon_13274_6	exon_13274_6	Tribonema minus UTEX_B_3156	exon	Contig_118 399070..399240 -
exon_13274_5	exon_13274_5	Tribonema minus UTEX_B_3156	exon	Contig_118 399631..399760 -
exon_13274_4	exon_13274_4	Tribonema minus UTEX_B_3156	exon	Contig_118 400311..400574 -
exon_13274_3	exon_13274_3	Tribonema minus UTEX_B_3156	exon	Contig_118 400996..401183 -
exon_13274_2	exon_13274_2	Tribonema minus UTEX_B_3156	exon	Contig_118 401530..401698 -
exon_13274_1	exon_13274_1	Tribonema minus UTEX_B_3156	exon	Contig_118 401934..402076 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_13274	UTR3_13274	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_118 398463..398581 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_13274	CDS_13274	Tribonema minus UTEX_B_3156	CDS	Contig_118 401934..401953 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_13274	UTR5_13274	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_118 401954..402076 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_118:398463..402076-
coding sequence from alignment at Contig_118:398463..402076-

spliced messenger RNA

>mRNA_13274 ID=mRNA_13274|Name=jgi.p|Trimin1|352415|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1280bp|location=Sequence derived from alignment at Contig_118:398463..402076- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GGATAATCGGCCTGTCGATCATGCACAAACATCAGCACCACTCCACTCTC
ACTTGCGCACCAGCCGCTGCCTCAACTTCAGCCTCGAGCTCCTACGCCGA
AGAAGGAACTACTTTTAAGAACCATGGAGCTGCAGTGGCTCAGGTACCTA
TGCGAGGTCAGGCAGACAGCTGGGCTGGCGATACTCTTTGGCTCCATGGC
CGTCCTGTCAGCTTGCATCGGCATCAGCGAGGTCACTGACATTGGCCAGA
AGTGGGCTGGCAACAGCCTCACCTTCCCCCCCATCGCCCTTCTGCTGGCT
AACCTGACACAGGCTCTATTTGGCCTCTCCAACATCGGCGTCGGCCTGGC
ATGGCTCGTGTCAGGCAAGGGGAGCGTCGGCTGGAGCTTCTTCAGCATGG
TGATCACATATGCCGCGTGGTTTCCCTTCCTTACGGTCATCTCGCTCATC
AGCTTCACGGGCGACAACTACCCGCAGGCGCCGCAGCCGTTCATTCCCAT
GACCCTCATGCCCACCACCACCGACGTCAACGCCGTCACCGCGCTCGCGG
CGCTGGGCTTCATCGCGTACGGCGCCAACCTGGTGGGCGCCCTCACCTTC
TGCGCCACCAAGCTGTTCCGCGCGCACAGCGTGGCGGGCGTCACGGCGTA
CACGGGCGCGTACTACGCGAGCCGCCAGACGTACTATGGCTTTCTGACGC
TGCTGGCGGGCGTTGTGCAGCTCGCGCTGGGCGCTTATGTCCAGGACAAT
TTCGGCAGCGACCGTCTCTTGGAGCCCATCGCCGCCGGCCCCTTCACCGT
CACATACTCGCAGGCGTCAATCGCCATGGGTGTGCTGGTGATGTTCCAGG
GCGCCCTCCTGATGGCGCGCTCCTACATGTCGAAGGACTCCAAGGTCGCA
ACGGGCGCCGCCTTCGACTGGTGGAGCGTCTTCGCCTACGTGACAGTGCT
CGCCGTTCAGGTGCTGACGCAGGTCGCAGTGGCGCCCGCACCGGCGGCGG
GCCGCGCTAGCACCGTTTTCGAGACGCTGGCACTGGCGGTTTTCCCGGTG
TACTTGGACATCAAGTCGCGCTCCGCGCCGGAGGCGTTCCCCTCCGACTT
CTACTCGCTCGAGGAGGCAGGCCCCGCCAAGTCCGTGGAGGAGCACATGC
CGTCCGCGTGAACTTCAAGTGCCCCCCCACATCTGCACCTCGACTTCAAC
TTCCCCCACTTTTTACCTGTGACGTCTCTGCGGGCGCCTTGCGGCCCTCA
ATCGCTGGAGGGCCGCGGCTGCTGCGCGCG

protein sequence of jgi.p|Trimin1|352415

>Trimin1|352415|estExt_Genemark1.C_Ctg_1180048 ID=Trimin1|352415|estExt_Genemark1.C_Ctg_1180048|Name=jgi.p|Trimin1|352415|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=346bp
MELQWLRYLCEVRQTAGLAILFGSMAVLSACIGISEVTDIGQKWAGNSLT
FPPIALLLANLTQALFGLSNIGVGLAWLVSGKGSVGWSFFSMVITYAAWF
PFLTVISLISFTGDNYPQAPQPFIPMTLMPTTTDVNAVTALAALGFIAYG
ANLVGALTFCATKLFRAHSVAGVTAYTGAYYASRQTYYGFLTLLAGVVQL
ALGAYVQDNFGSDRLLEPIAAGPFTVTYSQASIAMGVLVMFQGALLMARS
YMSKDSKVATGAAFDWWSVFAYVTVLAVQVLTQVAVAPAPAAGRASTVFE
TLALAVFPVYLDIKSRSAPEAFPSDFYSLEEAGPAKSVEEHMPSA*

mRNA from alignment at Contig_118:398463..402076-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_13274 ID=mRNA_13274|Name=jgi.p|Trimin1|352415|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3614bp|location=Sequence derived from alignment at Contig_118:398463..402076- (Tribonema minus UTEX_B_3156 )
GGATAATCGGCCTGTCGATCATGCACAAACATCAGCACCACTCCACTCTC
ACTTGCGCACCAGCCGCTGCCTCAACTTCAGCCTCGAGCTCCTACGCCGA
AGAAGGAACTACTTTTAAGAACCATGGAGCTGCAGTGGCTCAGGTGCGTC
GCTGCGCATTGCATGCATGCTCAATCTCTGTCATCGCAGCCTCAGACAGC
CGCCTGCTGCCAGGCTTTAGCGACATAAGTAGAACGTATGCATGATGCGC
GGCTCTACTATGGTCAACAACGGCCCTTGTTGTACAGTGCTTTGACAGTT
GGCTCGCACGCTGTGCTGGTCGCCAGCATAACACGCTTCATTCGGTTGCA
CGCTGGTTTTGCGCTGTTCTCTGCCCAGGTACCTATGCGAGGTCAGGCAG
ACAGCTGGGCTGGCGATACTCTTTGGCTCCATGGCCGTCCTGTCAGCTTG
CATCGGCATCAGCGAGGTCACTGACATTGGCCAGAAGTGGGCTGGCAACA
GCCTCACCTTCCCCCCCATCGCCCTTCTGCTGGCTAACCTGACACAGGTG
AGCTCCCGCGATTTCGTCCTGGGTGGCTCAACAAAGAGCTAGCAATAGAC
CATCAGCTGCAGCAAGCAGGGTTAACCAATTGAGCGTGTTCATGCATGCA
GAGTTGTGTCCTCCCTCCCACGCTCTCCATTTGCCTTCTGCCAATGCCAT
ACTTGACGTTGAGCTGGCGCATGCTGCAAAGCCTCAACAAGTCGCTCTTT
GTCGCTGTTCAGCGGCGAACAACACCTGCTATCTACATCTTGAAAGCTCA
AGTTGCTGGCCACTACACCGCAGCAGTGCCTTCCTGTAGCATTGCCGCAC
TCAGCCCCATCCGTTGCCTCTTCTGCCCCCCCCGCTCTCTCAGGCTCTAT
TTGGCCTCTCCAACATCGGCGTCGGCCTGGCATGGCTCGTGTCAGGCAAG
GGGAGCGTCGGCTGGAGCTTCTTCAGCATGGTGATCACATATGCCGCGTG
GTTTCCCTTCCTTACGGTCATCTCGCTCATCAGCTTCACGGGCGACAACT
ACCCGCAGGCGCCGCAGCCGTTCATTCCCATGTGAGTCAGGGTCAAGAGC
CAGAGTTAGGTTTAGATGTCTGCCCTGAATCATCAGGTCCCACGCTGCAA
TGACCCACTTCTGCTGACGTACAACTTTTGCTGCACAGATTGTTGAAAAA
GTTTCTGCTGTTGTCACCTTGAAGCAGCTCTGTTGCTCTCGTTTGAGGCA
TCGCTGTCCACTGACCACGGTTTGTACTGCTTTGCTTCCCATTGGGCTGT
AACTTCATCATGATGCAACTTCACTCACACTCAGAGGCACAACTGGCGCG
CCCCTCAACAGGCCCCATGCCCCCCCCCCCCCCCCCCTCTGGTCGTAACC
TCTTTGTACAACACCGACTCTTCCGCCTGGCCACACTGACAATCTGCTCA
ACCCCCGTATTGCCCCCCCCCCCCCCCCCCAATCCCCCCCCCCCCTCTCC
AGGACCCTCATGCCCACCACCACCGACGTCAACGCCGTCACCGCGCTCGC
GGCGCTGGGCTTCATCGCGTACGGCGCCAACCTGGTGGGCGCCCTCACCT
TCTGCGCCACCAAGCTGTTCCGCGCGCACAGCGTGGCGGGCGTCACGGCG
TACACGGGCGCGTACTACGCGAGCCGCCAGACGTACTATGGCTTTCTGAC
GCTGCTGGCGGGCGTTGTGCAGCTCGCGCTGGGCGCTTATGTCCAGGACA
ATTTCGGCAGCGACCGGTGAGTGGCTGGGGGCTGCAACACAGAGCTTTTT
TTTTAATGTTCCGCTCGGAAGATGAACAAGCGCTGCAATCATGCACAGCA
TCGTGCGGTCACAACTCTTCATGCGCAACAGTATTGAAACATGCATGGTG
CAGAAGTGTGTCGGGTGCTTGGGTGCAAATGTGTGTCAGGCAAGGCAGCA
GCAGTGCAGTCAGAGCGGCTGATGCGATCGCCTCGCATAGCAACAGCAGG
TGGACCGCTTGTCCTACGTCCGTAGGCACGCTCTAGCACGCACGCATGCC
GCTGGCATCCCTGACAATACGCGGGCCCGATAATTTCCTGGGCAGTGGCT
CGTCTTTTGAGGTGTTGATTAGGGCTAGGGCGAGGGTTGGGGTTTACGCC
GGTTGTTACCAGCGGTGCTGCGTGCGTTGAGCCCTGTGCTAGCGTACCTT
CGTCCCGGCACCTAGGGTTTGGGCTAGAACTAGGCCTAGAGGTATGTCCA
CCGCCCCTTGTGGCCCCTTAACACACACACACTCTCTATCTCTCTCTCTC
TTTCTCCATTCTGCAGTCTCTTGGAGCCCATCGCCGCCGGCCCCTTCACC
GTCACATACTCGCAGGCGTCAATCGCCATGGGTGTGCTGGTGATGTTCCA
GGGCGCCCTCCTGATGGCGCGCTCCTACATGTCGAAGGACTCCAAGGTGA
GCGCACGCACGCACAGCGCACGCGCCGCGGCAGCCAGCAGAAATGTGGCG
ACGCATTGAAACAGGACGCCGTGTAACAAGCTGTAAGTGTACATAGATCA
CCGTGCGCGACTTCAAGGTGCAGTTGCACTTTTGAGCAGCGGGCCGCTGC
GCTGCTGCGTCCCACGCATGCAGCGCGCGCATGCACGGCCCGGTGTTGCT
TTTCACCTCGTGCAGGCGCCACTGCCCCCTCTGCGCTAACCGCCACCACA
AGAGCGCACACGCAACGCGCACCCGCTCGCATACGCGCCCACAAGCCGCA
TACGACACGCACACATGCAGAGTGCTAACGCGTCAACAGTGGCAAATCTG
ACCTCCGTAATTTGTGCGTGTGCATGTCCGCCGCAGGTCGCAACGGGCGC
CGCCTTCGACTGGTGGAGCGTCTTCGCCTACGTGACAGTGCTCGCCGTTC
AGGTGCTGACGCAGGTCGCAGTGGCGCCCGCACCGGCGGCGGGCCGCGCT
AGCACCGTTTTCGAGACGCTGGCACTGGCGGTTTTCCCGGTGTACTTGGA
CATCAAGGTGAGAGCGTCACAACAGTGGTTGCTCTGTTTGCCTAATCGCA
AAGGCTTGCCATATGGCACTCCTGCGGAACTCATGTGGCTGTTGCGGTTG
CCTTCTTTACTGCATGCATTACGCTCTTGGTACCCTGCTAGAGTGTTTCC
GCCCCAGCTTTCAATTCAAATGTTCCCTTTGGTTTGATGAGGGCTTCTGC
TGCGCTGTGCCGCCATCGCCTGCACCGCTTGCACCATCATACACCCCATG
TCACAGGCCCACCTGATTGAGGCCAGGCGTCAAATACATTCACTGCGTTG
CTTGGTGCTCAAGGCCGTTGCGTACGCTGCAGCGACCGGGTATCAGCAAA
CACTCACTCTCGCTGTGTTCATACCTACCTTTCCCCCTCCCCCCCGCAGT
CGCGCTCCGCGCCGGAGGCGTTCCCCTCCGACTTCTACTCGCTCGAGGAG
GCAGGCCCCGCCAAGTCCGTGGAGGAGCACATGCCGTCCGCGTGAACTTC
AAGTGCCCCCCCACATCTGCACCTCGACTTCAACTTCCCCCACTTTTTAC
CTGTGACGTCTCTGCGGGCGCCTTGCGGCCCTCAATCGCTGGAGGGCCGC
GGCTGCTGCGCGCG

Coding sequence (CDS) from alignment at Contig_118:398463..402076-

>mRNA_13274 ID=mRNA_13274|Name=jgi.p|Trimin1|352415|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1038bp|location=Sequence derived from alignment at Contig_118:398463..402076- (Tribonema minus UTEX_B_3156 )
ATGGAGCTGCAGTGGCTCAGGTACCTATGCGAGGTCAGGCAGACAGCTGG
GCTGGCGATACTCTTTGGCTCCATGGCCGTCCTGTCAGCTTGCATCGGCA
TCAGCGAGGTCACTGACATTGGCCAGAAGTGGGCTGGCAACAGCCTCACC
TTCCCCCCCATCGCCCTTCTGCTGGCTAACCTGACACAGGCTCTATTTGG
CCTCTCCAACATCGGCGTCGGCCTGGCATGGCTCGTGTCAGGCAAGGGGA
GCGTCGGCTGGAGCTTCTTCAGCATGGTGATCACATATGCCGCGTGGTTT
CCCTTCCTTACGGTCATCTCGCTCATCAGCTTCACGGGCGACAACTACCC
GCAGGCGCCGCAGCCGTTCATTCCCATGACCCTCATGCCCACCACCACCG
ACGTCAACGCCGTCACCGCGCTCGCGGCGCTGGGCTTCATCGCGTACGGC
GCCAACCTGGTGGGCGCCCTCACCTTCTGCGCCACCAAGCTGTTCCGCGC
GCACAGCGTGGCGGGCGTCACGGCGTACACGGGCGCGTACTACGCGAGCC
GCCAGACGTACTATGGCTTTCTGACGCTGCTGGCGGGCGTTGTGCAGCTC
GCGCTGGGCGCTTATGTCCAGGACAATTTCGGCAGCGACCGTCTCTTGGA
GCCCATCGCCGCCGGCCCCTTCACCGTCACATACTCGCAGGCGTCAATCG
CCATGGGTGTGCTGGTGATGTTCCAGGGCGCCCTCCTGATGGCGCGCTCC
TACATGTCGAAGGACTCCAAGGTCGCAACGGGCGCCGCCTTCGACTGGTG
GAGCGTCTTCGCCTACGTGACAGTGCTCGCCGTTCAGGTGCTGACGCAGG
TCGCAGTGGCGCCCGCACCGGCGGCGGGCCGCGCTAGCACCGTTTTCGAG
ACGCTGGCACTGGCGGTTTTCCCGGTGTACTTGGACATCAAGTCGCGCTC
CGCGCCGGAGGCGTTCCCCTCCGACTTCTACTCGCTCGAGGAGGCAGGCC
CCGCCAAGTCCGTGGAGGAGCACATGCCGTCCGCGTGA