Trimin1|352414|estExt_Genemark1.C_Ctg_1180047 (polypeptide) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|352414 vs. uniprot
Match: A0A836CN06_9STRA (Myb-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN06_9STRA) HSP 1 Score: 407 bits (1045), Expect = 9.660e-143 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0 Query: 1 MDGVATASSVRYRFSEDQHEEADMPWTEFEDWLLQDTFARYAIGSGKHVLWNRMVTEVPELIGRTPQEARRRWLHITGRLTDQRQGGXXXXXXXXXXXXXXXGSSGAPDVETFYLQPPLLHDWEELEDGSFEGSVEGMGGLADGVLVRTRGVDLAGRRVADQYVRTECGAVFELGARRGADDDAATTALAPVASAFAAAAPLLALASAAAVLGATVLTHHVQLEVFVV 228 MDGVATASSVRYRFSEDQHEEADMPWTEFEDWLLQDTFARYAIGSGKHVLWNRMVTEVPELIGRTPQEARRRWLHITGRLTDQRQGGXXXXXXXXXXXXXXXGSSGAPDVETFYLQPPLLHDWEELEDGSFEGSVEGMGGLADGVLVRTRGVDLAGRRVADQYVRTECGAVFELGARRGADDDAATTALAPVASAFAAAAPLLALASAAAVLGATVLTHHVQLEVFVV Sbjct: 1 MDGVATASSVRYRFSEDQHEEADMPWTEFEDWLLQDTFARYAIGSGKHVLWNRMVTEVPELIGRTPQEARRRWLHITGRLTDQRQGGXXXXXXXXXXXXXXXGSSGAPDVETFYLQPPLLHDWEELEDGSFEGSVEGMGGLADGVLVRTRGVDLAGRRVADQYVRTECGAVFELGARRGADDDAATTALAPVASAFAAAAPLLALASAAAVLGATVLTHHVQLEVFVV 228
BLAST of jgi.p|Trimin1|352414 vs. uniprot
Match: D7G8N9_ECTSI (Myb-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8N9_ECTSI) HSP 1 Score: 189 bits (480), Expect = 3.140e-55 Identity = 105/211 (49.76%), Postives = 135/211 (63.98%), Query Frame = 0 Query: 22 ADMPWTEFEDWLLQDTFARYAIGSGKHVLWNRMVTEVPELIGRTPQEARRRWLHITGRLTDQRQGGXXXXXXXXXXXXXXXGSSGAPDVETFYLQPPLLHDWEELEDG----SFEGSVEGMGGLADGVLVRTRGVDLAGRRVADQYVRTECGAVFELGARRGADDDAATTALAPVASAFAAAAPLLALASAAAVLGATVLTHHVQLEVFVV 228 A+ WTEFEDWLLQDT++RYAIGSGKHVLW RMV EVPEL+ RTPQEAR RWL +TGRL+ GG +G+P ++ FY+QPP+L WEE+ +G SF G+V G GLADG + T +D++GR++ DQYV T+CG V+ELG RR D ++ +S AP LA A A T L+HH+Q+EVFV+ Sbjct: 164 AEAAWTEFEDWLLQDTYSRYAIGSGKHVLWRRMVREVPELMERTPQEARERWLRLTGRLS---AGGAEGGSRRERGEVM----AGSPALDNFYIQPPVLEQWEEIVEGEGMGSFRGNVFGQRGLADGTAMTTAPIDISGRKIQDQYVATQCGVVYELGERRETD------LVSQASSKMLKIAPATVLALAGAFYALTALSHHIQVEVFVI 361
BLAST of jgi.p|Trimin1|352414 vs. uniprot
Match: A0A7S0Q7J8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q7J8_9EUKA) HSP 1 Score: 71.2 bits (173), Expect = 7.950e-12 Identity = 40/130 (30.77%), Postives = 62/130 (47.69%), Query Frame = 0 Query: 20 EEADMPWTEFEDWLLQDTFARYAIGSGKHVLWNRMVTEVPELIGRTPQEARRRWLHITGRLTDQRQGGXXXXXXXXXXXXXXXGSSGAPDVETFYLQPPLLHDWEELEDGSFEGSVEGMGGLADGVLVRT 149 E+ + W++ E W L+D Y++ G+ V+W R+ +VPELIGR P++ R RWL + + AP V + PP L +WE L D F+G + G+ G+ DG + T Sbjct: 53 EDLEDGWSDRELWALEDAVPHYSLERGRLVMWRRLSLDVPELIGRPPEQLRARWLSLQ--------------------------PADAPQV--WPENPPTLENWEALGDSCFQGDLFGVSGVRDGTVRAT 154 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352414 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Trimin1|352414|estExt_Genemark1.C_Ctg_1180047 ID=Trimin1|352414|estExt_Genemark1.C_Ctg_1180047|Name=jgi.p|Trimin1|352414|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=229bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
|