Trimin1|352362|estExt_Genemark1.C_Ctg_1160055 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352362
Unique NameTrimin1|352362|estExt_Genemark1.C_Ctg_1160055
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length188
Homology
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A836CQ06_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQ06_9STRA)

HSP 1 Score: 385 bits (989), Expect = 1.460e-135
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0
Query:    1 MSDLQEAAGSGGGAVDEKCDSSHKPSCIVQYWKGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWKACGRSAPTRPCPVDVDI 187
            MSDLQEAAGSGGGAVDEKCDSSHKPSCIVQYWKGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWKACGRSAPTRPCPVDVDI
Sbjct:    1 MSDLQEAAGSGGGAVDEKCDSSHKPSCIVQYWKGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWKACGRSAPTRPCPVDVDI 187          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A836CBT9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT9_9STRA)

HSP 1 Score: 196 bits (498), Expect = 1.320e-60
Identity = 88/144 (61.11%), Postives = 113/144 (78.47%), Query Frame = 0
Query:   27 CIVQYWKGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWK 170
            C+ + W+ Y  LL+  PL TK++TA+ M A GE +G+ L+K+GPGT RER +RL AF VFGLVVNGP FHFWY  LE++A++WSKL+GG  +ILFK+++DRLL+TPPYL LTLVGLRWLQD +L  A+QA   +YK ALL NWK
Sbjct:   21 CLARGWRTYHGLLLEHPLLTKSVTASLMAATGEFVGSYLKKSGPGTPRERARRLGAFAVFGLVVNGPAFHFWYAFLEQLAQRWSKLTGGHHIILFKVIVDRLLMTPPYLVLTLVGLRWLQDFKLLLALQACALVYKSALLLNWK 164          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A6H5L3A8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3A8_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 1.280e-30
Identity = 77/194 (39.69%), Postives = 105/194 (54.12%), Query Frame = 0
Query:    8 AGSGGGAVDE---KCDSSHKPSCIVQYWKGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGP-------GT-----------QRER------LKRLWAFTVFGLVVNGPVFHFWYGTLEKIA---RKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWKA 171
            AG  G AV E   K + + +   +   W  Y+  +   PL TK++T+A + A+GEL G+ LR + P       GT           QR        L+R  AF +FGL+VNGPVFH+WYG LE+ A   RK  +L GG   I FK+ +DR L+TPPYLA+TL  LR LQ      ++  +  +Y+  L TNWKA
Sbjct:   13 AGEWGEAVGERNSKRNEAGEERRLSSPWALYERSMSERPLLTKSVTSALVSALGELAGSALRSSSPPPLPVGAGTALAVKGRAGAGQRTGTAAPGLLRRTAAFAIFGLLVNGPVFHWWYGALERAAARRRKAGELPGGAGDITFKVAVDRFLMTPPYLAITLASLRLLQGLGAKRSIDETSALYRGVLFTNWKA 206          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: D7FXU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU0_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 3.110e-28
Identity = 72/194 (37.11%), Postives = 100/194 (51.55%), Query Frame = 0
Query:    8 AGSGGGAVDEKCDSSH----KPSCIVQYWKGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRER------------------------LKRLWAFTVFGLVVNGPVFHFWYGTLEKIA---RKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWK 170
            AG G  AV E+  S+H    +   +   W  Y+  +   PL TK++T+A + A+GEL+G+ LR + P                              L+R  AF +FGL+VNGPVFH+WYG LE  A   RK  +  GG   I FK+ +DR L+TPPYLA+TL  LR LQ      ++  +  +Y+  L TNWK
Sbjct:   19 AGEGSEAVGER-GSNHSGDGEEQRLSSPWALYKRSMSERPLLTKSVTSALVSALGELMGSALRSSPPXXXXXXXXXXXXXXXXXXXXXXXXXAAPGLLRRTAAFAIFGLLVNGPVFHWWYGALEGAAARRRKAGEPPGGAGDITFKVAVDRFLMTPPYLAITLASLRLLQGLGAKRSIGETSALYRGVLFTNWK 211          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A485LPX3_9STRA (Aste57867_24163 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LPX3_9STRA)

HSP 1 Score: 105 bits (262), Expect = 2.900e-25
Identity = 60/143 (41.96%), Postives = 84/143 (58.74%), Query Frame = 0
Query:   28 IVQYWKGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWK 170
            + +YW  YQ  L   PL+TKA T+A MG  GE++   L+K    T   R  R+ AF ++G VV GP+ H+WYG LE++    +KL+  +     K+L+DRLLLTPP++ALT++ L  L      AA    R +Y   LL NWK
Sbjct:    8 VQEYWAKYQDELREKPLQTKAATSAAMGVCGEVLAHTLKKKPIYTVSFR--RMLAFGLYGGVVTGPIMHYWYGFLERMRSGGNKLTPTQ-----KLLMDRLLLTPPFVALTILMLGVLNGASATAARANLRAVYWTTLLMNWK 143          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: W7TTQ5_9STRA (Peroxisomal membrane protein 2 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTQ5_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.060e-22
Identity = 57/136 (41.91%), Postives = 84/136 (61.76%), Query Frame = 0
Query:   33 KGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTN 168
            + Y   L+T P+ TKA+T+A + A+G+++ +    +G G +    +R   F +FG +V GP+ H+WYG LEK  R    L GG+ V + K+LLD+LL TPP+LALTL  LR L+  R GAA +  + +Y   L TN
Sbjct:   59 RAYHHCLVTRPVLTKALTSAVISALGDILAS----SGKGGRGRSGRRTLGFFLFGGLVTGPLCHYWYGLLEKKVRG---LQGGKNVAM-KVLLDKLLFTPPFLALTLFLLRLLESGRPGAAWRGMKQVYFPTLKTN 186          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A067D856_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067D856_SAPPC)

HSP 1 Score: 97.1 bits (240), Expect = 4.750e-22
Identity = 58/136 (42.65%), Postives = 76/136 (55.88%), Query Frame = 0
Query:   35 YQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWK 170
            YQA L+  PL+TKAIT+A MGA GE++   L+      Q   L+R+  F ++   +  PV H WYG LE+   +  +LS        K+LLDRLLLTPP+LALTL  L  L    + A+    R  Y  AL  NWK
Sbjct:   14 YQAALLKRPLQTKAITSAVMGASGEIVAHGLKYKS--LQGLSLQRVLVFALYSGGITAPVMHAWYGFLEQCRVRGDRLSNNG-----KLLLDRLLLTPPFLALTLFALSLLTGASVAASKALVRSKYVTALWMNWK 142          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A6G0XN93_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XN93_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.150e-21
Identity = 56/136 (41.18%), Postives = 76/136 (55.88%), Query Frame = 0
Query:   35 YQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWK 170
            YQ  L   PL+TKA+T+A MG  GE++   L+K    T    L+R+ AF VFG  + GP+ HFWYG LE++  +  K     Q    K+ LDRL+LTPP++ALT+  L  L    + AA    R  Y   L  NW+
Sbjct:   15 YQKELKERPLRTKALTSASMGICGEILAHVLKKKPIYTVS--LRRVLAFGVFGGAITGPLMHFWYGVLEQVRTRDDKSLTPMQ----KLFLDRLVLTPPFVALTIFALGVLNGASVQAARSNVRATYFSTLFMNWR 144          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A5D6Y4Q1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y4Q1_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 7.360e-21
Identity = 54/140 (38.57%), Postives = 83/140 (59.29%), Query Frame = 0
Query:   32 WKGYQALLITDPLKTKAITAACMGAIGELIGAQLR-KAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWK 170
            W+ YQ  L  +P++TKA+T+A +  +GE++G  L+ K   G     L+++ AF  FG VV GP+ H+WYG LE      SKL+  +     K+LLDRL+ TPP+ ALT+  L  ++   + A+    R ++  ALL NW+
Sbjct:    5 WQEYQVALKKNPVRTKALTSASVAMLGEVLGHFLKHKTLRGLS---LRQMLAFFTFGGVVTGPLLHYWYGLLENQRFTKSKLTPNQ-----KLLLDRLVYTPPFTALTIFSLGVMRGSSVEASKANLRRVFVGALLMNWR 136          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A1V9Z519_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z519_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 3.290e-20
Identity = 65/158 (41.14%), Postives = 83/158 (52.53%), Query Frame = 0
Query:   32 WKGYQALLITDPL--------------KTKAITAACMGAIGELIGAQLR-KAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGI----YKQALLTNWK 170
            W+ YQ  L  +PL              +TKAIT+A MGAIGE+    L+ K   G     L+RL AF  +G  +  PV HFWYG LE++  +  +L+        K+LLDRLLLTPP+LA TL  L  L     GA+  ASR +    Y  AL  NWK
Sbjct:   12 WERYQIALKKNPLEFVQPTGFDSTSSDRTKAITSAAMGAIGEVAAHYLKHKTLHGLS---LRRLMAFAFYGGAITAPVMHFWYGFLEQVRVEGERLTSNG-----KLLLDRLLLTPPFLAATLFSLSVLT----GASTDASRALLRKNYITALWMNWK 157          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CQ06_9STRA1.460e-135100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CBT9_9STRA1.320e-6061.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5L3A8_9PHAE1.280e-3039.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXU0_ECTSI3.110e-2837.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A485LPX3_9STRA2.900e-2541.96Aste57867_24163 protein n=1 Tax=Aphanomyces stella... [more]
W7TTQ5_9STRA1.060e-2241.91Peroxisomal membrane protein 2 n=3 Tax=Monodopsida... [more]
A0A067D856_SAPPC4.750e-2242.65Uncharacterized protein n=3 Tax=Saprolegnia TaxID=... [more]
A0A6G0XN93_9STRA1.150e-2141.18Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A5D6Y4Q1_9STRA7.360e-2138.57Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A1V9Z519_9STRA3.290e-2041.14Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 30..170
NoneNo IPR availablePANTHERPTHR11266:SF80PEROXISOMAL MEMBRANE PROTEIN 2coord: 30..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_116contigContig_116:322769..324373 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352362mRNA_11296Tribonema minus UTEX_B_3156 mRNAContig_116 322769..324384 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352362|estExt_Genemark1.C_Ctg_1160055 ID=Trimin1|352362|estExt_Genemark1.C_Ctg_1160055|Name=jgi.p|Trimin1|352362|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=188bp
MSDLQEAAGSGGGAVDEKCDSSHKPSCIVQYWKGYQALLITDPLKTKAIT
AACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYG
TLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRL
GAAVQASRGIYKQALLTNWKACGRSAPTRPCPVDVDI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22