mRNA_11296 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A836CQ06_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQ06_9STRA) HSP 1 Score: 385 bits (990), Expect = 1.160e-135 Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 3
Query: 12 MSDLQEAAGSGGGAVDEKCDSSHKPSCIVQYWKGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWKACGRSAPTRPCPVDVDI 572
MSDLQEAAGSGGGAVDEKCDSSHKPSCIVQYWKGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWKACGRSAPTRPCPVDVDI
Sbjct: 1 MSDLQEAAGSGGGAVDEKCDSSHKPSCIVQYWKGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWKACGRSAPTRPCPVDVDI 187
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A836CBT9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT9_9STRA) HSP 1 Score: 196 bits (498), Expect = 1.480e-60 Identity = 88/144 (61.11%), Postives = 113/144 (78.47%), Query Frame = 3
Query: 90 CIVQYWKGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWK 521
C+ + W+ Y LL+ PL TK++TA+ M A GE +G+ L+K+GPGT RER +RL AF VFGLVVNGP FHFWY LE++A++WSKL+GG +ILFK+++DRLL+TPPYL LTLVGLRWLQD +L A+QA +YK ALL NWK
Sbjct: 21 CLARGWRTYHGLLLEHPLLTKSVTASLMAATGEFVGSYLKKSGPGTPRERARRLGAFAVFGLVVNGPAFHFWYAFLEQLAQRWSKLTGGHHIILFKVIVDRLLMTPPYLVLTLVGLRWLQDFKLLLALQACALVYKSALLLNWK 164
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A6H5L3A8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3A8_9PHAE) HSP 1 Score: 122 bits (305), Expect = 1.410e-30 Identity = 77/194 (39.69%), Postives = 105/194 (54.12%), Query Frame = 3
Query: 33 AGSGGGAVDE---KCDSSHKPSCIVQYWKGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGP-------GT-----------QRER------LKRLWAFTVFGLVVNGPVFHFWYGTLEKIA---RKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWKA 524
AG G AV E K + + + + W Y+ + PL TK++T+A + A+GEL G+ LR + P GT QR L+R AF +FGL+VNGPVFH+WYG LE+ A RK +L GG I FK+ +DR L+TPPYLA+TL LR LQ ++ + +Y+ L TNWKA
Sbjct: 13 AGEWGEAVGERNSKRNEAGEERRLSSPWALYERSMSERPLLTKSVTSALVSALGELAGSALRSSSPPPLPVGAGTALAVKGRAGAGQRTGTAAPGLLRRTAAFAIFGLLVNGPVFHWWYGALERAAARRRKAGELPGGAGDITFKVAVDRFLMTPPYLAITLASLRLLQGLGAKRSIDETSALYRGVLFTNWKA 206
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: D7FXU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU0_ECTSI) HSP 1 Score: 115 bits (287), Expect = 3.420e-28 Identity = 72/194 (37.11%), Postives = 100/194 (51.55%), Query Frame = 3
Query: 33 AGSGGGAVDEKCDSSH----KPSCIVQYWKGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRER------------------------LKRLWAFTVFGLVVNGPVFHFWYGTLEKIA---RKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWK 521
AG G AV E+ S+H + + W Y+ + PL TK++T+A + A+GEL+G+ LR + P L+R AF +FGL+VNGPVFH+WYG LE A RK + GG I FK+ +DR L+TPPYLA+TL LR LQ ++ + +Y+ L TNWK
Sbjct: 19 AGEGSEAVGER-GSNHSGDGEEQRLSSPWALYKRSMSERPLLTKSVTSALVSALGELMGSALRSSPPXXXXXXXXXXXXXXXXXXXXXXXXXAAPGLLRRTAAFAIFGLLVNGPVFHWWYGALEGAAARRRKAGEPPGGAGDITFKVAVDRFLMTPPYLAITLASLRLLQGLGAKRSIGETSALYRGVLFTNWK 211
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A485LPX3_9STRA (Aste57867_24163 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LPX3_9STRA) HSP 1 Score: 105 bits (262), Expect = 3.180e-25 Identity = 60/143 (41.96%), Postives = 84/143 (58.74%), Query Frame = 3
Query: 93 IVQYWKGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWK 521
+ +YW YQ L PL+TKA T+A MG GE++ L+K T R R+ AF ++G VV GP+ H+WYG LE++ +KL+ + K+L+DRLLLTPP++ALT++ L L AA R +Y LL NWK
Sbjct: 8 VQEYWAKYQDELREKPLQTKAATSAAMGVCGEVLAHTLKKKPIYTVSFR--RMLAFGLYGGVVTGPIMHYWYGFLERMRSGGNKLTPTQ-----KLLMDRLLLTPPFVALTILMLGVLNGASATAARANLRAVYWTTLLMNWK 143
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: W7TTQ5_9STRA (Peroxisomal membrane protein 2 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTQ5_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.160e-22 Identity = 57/136 (41.91%), Postives = 84/136 (61.76%), Query Frame = 3
Query: 108 KGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTN 515
+ Y L+T P+ TKA+T+A + A+G+++ + +G G + +R F +FG +V GP+ H+WYG LEK R L GG+ V + K+LLD+LL TPP+LALTL LR L+ R GAA + + +Y L TN
Sbjct: 59 RAYHHCLVTRPVLTKALTSAVISALGDILAS----SGKGGRGRSGRRTLGFFLFGGLVTGPLCHYWYGLLEKKVRG---LQGGKNVAM-KVLLDKLLFTPPFLALTLFLLRLLESGRPGAAWRGMKQVYFPTLKTN 186
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A067D856_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067D856_SAPPC) HSP 1 Score: 97.1 bits (240), Expect = 5.190e-22 Identity = 58/136 (42.65%), Postives = 76/136 (55.88%), Query Frame = 3
Query: 114 YQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWK 521
YQA L+ PL+TKAIT+A MGA GE++ L+ Q L+R+ F ++ + PV H WYG LE+ + +LS K+LLDRLLLTPP+LALTL L L + A+ R Y AL NWK
Sbjct: 14 YQAALLKRPLQTKAITSAVMGASGEIVAHGLKYKS--LQGLSLQRVLVFALYSGGITAPVMHAWYGFLEQCRVRGDRLSNNG-----KLLLDRLLLTPPFLALTLFALSLLTGASVAASKALVRSKYVTALWMNWK 142
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A6G0XN93_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XN93_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 1.250e-21 Identity = 56/136 (41.18%), Postives = 76/136 (55.88%), Query Frame = 3
Query: 114 YQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWK 521
YQ L PL+TKA+T+A MG GE++ L+K T L+R+ AF VFG + GP+ HFWYG LE++ + K Q K+ LDRL+LTPP++ALT+ L L + AA R Y L NW+
Sbjct: 15 YQKELKERPLRTKALTSASMGICGEILAHVLKKKPIYTVS--LRRVLAFGVFGGAITGPLMHFWYGVLEQVRTRDDKSLTPMQ----KLFLDRLVLTPPFVALTIFALGVLNGASVQAARSNVRATYFSTLFMNWR 144
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A5D6Y4Q1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y4Q1_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 8.020e-21 Identity = 54/140 (38.57%), Postives = 83/140 (59.29%), Query Frame = 3
Query: 105 WKGYQALLITDPLKTKAITAACMGAIGELIGAQLR-KAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWK 521
W+ YQ L +P++TKA+T+A + +GE++G L+ K G L+++ AF FG VV GP+ H+WYG LE SKL+ + K+LLDRL+ TPP+ ALT+ L ++ + A+ R ++ ALL NW+
Sbjct: 5 WQEYQVALKKNPVRTKALTSASVAMLGEVLGHFLKHKTLRGLS---LRQMLAFFTFGGVVTGPLLHYWYGLLENQRFTKSKLTPNQ-----KLLLDRLVYTPPFTALTIFSLGVMRGSSVEASKANLRRVFVGALLMNWR 136
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A1V9Z519_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z519_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 3.590e-20 Identity = 65/158 (41.14%), Postives = 83/158 (52.53%), Query Frame = 3
Query: 105 WKGYQALLITDPL--------------KTKAITAACMGAIGELIGAQLR-KAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGI----YKQALLTNWK 521
W+ YQ L +PL +TKAIT+A MGAIGE+ L+ K G L+RL AF +G + PV HFWYG LE++ + +L+ K+LLDRLLLTPP+LA TL L L GA+ ASR + Y AL NWK
Sbjct: 12 WERYQIALKKNPLEFVQPTGFDSTSSDRTKAITSAAMGAIGEVAAHYLKHKTLHGLS---LRRLMAFAFYGGAITAPVMHFWYGFLEQVRVEGERLTSNG-----KLLLDRLLLTPPFLAATLFSLSVLT----GASTDASRALLRKNYITALWMNWK 157
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A835ZP26_9STRA (RanBD1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZP26_9STRA) HSP 1 Score: 404 bits (1039), Expect = 5.810e-140 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 1
Query: 1 MWQIGANPFQAALSTFGGGGFGSPSGAVGGIFGGXXXXXXXXXXXXXXXXXXXXXXPVQSDGXXDGTEPGSPEQSLSQEPTVIRVAGLQDPRDVRNGEEGERTLLQVRAKLFRLEAKAAPGXXXXXXXXXXXXXXSDTRPEWVEVGIGPVRVLQAQVPPAAGEGAAAAARAPSRVVMRRESHPGGAGTKVLLNVALRGKVEAASQSDKAVRLTAVLAKGSPPTTFLFKVKTNDEAAALLRCIREQVEQHAQHESGKAD 774
MWQIGANPFQAALSTFGGGGFGSPSGAVGGIFGGXXXXXXXXXXXXXXXXXXXXXXPVQSDGXXDGTEPGSPEQSLSQEPTVIRVAGLQDPRDVRNGEEGERTLLQVRAKLFRLEAKAAPGXXXXXXXXXXXXXXSDTRPEWVEVGIGPVRVLQAQVPPAAGEGAAAAARAPSRVVMRRESHPGGAGTKVLLNVALRGKVEAASQSDKAVRLTAVLAKGSPPTTFLFKVKTNDEAAALLRCIREQVEQHAQHESGKAD
Sbjct: 1 MWQIGANPFQAALSTFGGGGFGSPSGAVGGIFGGXXXXXXXXXXXXXXXXXXXXXXPVQSDGXXDGTEPGSPEQSLSQEPTVIRVAGLQDPRDVRNGEEGERTLLQVRAKLFRLEAKAAPGXXXXXXXXXXXXXXSDTRPEWVEVGIGPVRVLQAQVPPAAGEGAAAAARAPSRVVMRRESHPGGAGTKVLLNVALRGKVEAASQSDKAVRLTAVLAKGSPPTTFLFKVKTNDEAAALLRCIREQVEQHAQHESGKAD 258
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A7S2K2B0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K2B0_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 2.770e-14 Identity = 69/215 (32.09%), Postives = 92/215 (42.79%), Query Frame = 1
Query: 277 DVRNGEEGERTLLQVRAKLFRLEAKAAPGXXXXXXXXXXXXXXSDTRP-------------------------------------------------EWVEVGIGPVRVLQAQVPPAAGEGAAAAARAPSRVVMRRESHPGGAGTKVLLNVALRGKVEAASQSDKAVRLTAVLAKGSPPTTFLFKVKTNDEAAALLRCIREQVEQHAQHESGKAD 774
D+ NGEE E +LQ RAKLFRL KAA S P EW EVGIGP+RVL+ + + + + +R VMRRE HPGG GTKV+LN+ L +K VRLT V A+G P +LFK+KT DE L++ I ++ + E+G+A+
Sbjct: 256 DIANGEEEEECVLQCRAKLFRLCKKAAAAAVPQEAAEGTGLAASHVGPPTLPSAAKNDSVDDSKDEHEXXXXXXXTDAKAAKDGKEIKSDDSSSSGTEWREVGIGPLRVLRTE---------SKSKQITTRCVMRREMHPGGPGTKVILNMKLIKLANIKQSGEKFVRLTTV-AEGGEPVNYLFKLKTVDEVERLIKHIESGIDDAS--ETGEAE 458
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A7S1XJQ4_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJQ4_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 1.590e-12 Identity = 72/226 (31.86%), Postives = 102/226 (45.13%), Query Frame = 1
Query: 196 GTEPGSPEQSLSQEPT-VIRVAGLQDPRDVRNGEEGERTLLQVRAKLFRL---------------------------EAKAAPGXXXXXXXXXXXXXXSDTRP---------EWVEVGIGPVRVLQAQVPPAAGEGAAAAARAPSRVVMRRESHPGGAGTKVLLNVALRGKVEAASQSDKAVRLTAVLAKGSPPTTFLFKVKTNDEAAALLRCIREQVEQHAQHES 762
G G E ++EP V+ +A ++ NGEE E +VRAKL+R EAK G X + +WVEVGIGP+R+L + G+ A R+VMRRES PGG GTKV+LNVAL +V Q + ++RL+ + + S PTT+L +VK +D+ LL E+VE + E+
Sbjct: 211 GGADGGAEPKAAEEPAPVVSLAEVK----TENGEEAEDVAHEVRAKLYRFAPAIVGDEDKESVKLVQSSAVAKASKTEAKEEEGKAEGESXAKDNGAAEAAKDGEAAKVAAMKWVEVGIGPLRLLARRADDEGGKRRA-------RLVMRRESAPGGPGTKVILNVALNEQVAVVKQMETSMRLSCMDSVTSKPTTYLLRVKRSDQCDDLL----EKVESFTKGEN 421
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A7S1Z143_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z143_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 4.430e-11 Identity = 64/190 (33.68%), Postives = 85/190 (44.74%), Query Frame = 1
Query: 277 DVRNGEEGERTLLQVRAKLFRLE-------------------------------AKAAPGXXXXXXXXXXXXXXSDTRPEWVEVGIGPVRVLQAQVPPAAGEGAAAAARAPSRVVMRRESHPGGAGTKVLLNVALRGKVEAASQSDKAVRLTAVLAK----GSPPTT-FLFKVKTNDEAAALLRCIREQV 738
DV NGEE E + Q RAKLF+L+ + P + + +W EVGIGPVR+L P+A +RVV RRES PGG GTK++LNVALR + Q+DK VRL V + GS + +L+KVKT EA L + + E +
Sbjct: 244 DVANGEENETCVFQTRAKLFKLDTTKPSSEPSPQESQDSIGSSMAATSVPPSSSSSLGPKKTNSTDADSKLEESQEEKQQWKEVGIGPVRILTL---PSAST---------TRVVQRRESTPGGPGTKLILNVALRKECHVFRQADKYVRLATVEQEEGEEGSLSSVMYLWKVKTVGEADDLEKFLGEGI 421
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: D0NHN9_PHYIT (RanBD1 domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=D0NHN9_PHYIT) HSP 1 Score: 73.2 bits (178), Expect = 5.710e-11 Identity = 53/161 (32.92%), Postives = 83/161 (51.55%), Query Frame = 1
Query: 277 DVRNGEEGERTLLQVRAKLFRLEAKAAPGXXXXXXXXXXXXXXSDTRPEWVEVGIGPVRVLQAQVPPAAGEGAAAAARAPSRVVMRRESHPGGAGTKVLLNVALRGKVEAASQSDKAVRLTAVLAKGSP-------PTTFLFKVKTNDEAAALLRCIREQV 738
++ NGEEGER L++ RAKLF+L K ++ EVGIGPVRVL A+ A E + +RVVMRRES+P G GTK+L+N +L + +++K + LT + A P P T+L + ++++ ++ I+ +
Sbjct: 211 ELANGEEGERILVEKRAKLFKLVEK-----------------------DYTEVGIGPVRVLNAKDAKADDE------KVMARVVMRRESYPHGPGTKLLMNASLGSCLLCEKKTEKTMLLTVLEANEDPEADKKFTPVTYLMRFGSSEDLDVVMMRIQTHM 342
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A5D6YEL9_9STRA (RanBD1 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YEL9_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 2.800e-10 Identity = 56/136 (41.18%), Postives = 72/136 (52.94%), Query Frame = 1
Query: 238 PTVIRVAGLQDPRDVRNGEEGERTLLQVRAKLFRLEAKAAPGXXXXXXXXXXXXXXSDTRPEWVEVGIGPVRVLQAQVPPAAGEGAAAAARAPSRVVMRRESHPGGAGTKVLLNVALRGKVEAASQSDKAVRLTAV 645
P V L D ++ NGEEGER L++ RAKLF+L K E+ EVGIGP+RVL+ A E AA+A R+VMRRES+P G GTK+LLN L + ++DKA+ LT V
Sbjct: 192 PESTFVPALTDA-EIANGEEGERILIEKRAKLFKLGDK-----------------------EFAEVGIGPLRVLRL-----ATESAASA-----RLVMRRESYPRGPGTKLLLNARLNACLACIEKTDKAMLLTVV 293
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A8K1FEP6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEP6_PYTOL) HSP 1 Score: 70.5 bits (171), Expect = 3.230e-10 Identity = 58/169 (34.32%), Postives = 84/169 (49.70%), Query Frame = 1
Query: 253 VAGLQDPRDVRNGEEGERTLLQVRAKLFRLEAKAAPGXXXXXXXXXXXXXXSDTRPEWVEVGIGPVRVLQAQVPPAAGEGAAAAARAPSRVVMRRESHPGGAGTKVLLNVALRGKVEAASQSDKAVRLTAVL---AKGSPPTTFLFKVKTNDEAAALLRCIREQVEQHA 750
VA L D ++ NGEE E L++ RAKLF+ ++ EVG+GP RVL+ P A + AA +A +R+VMRRESHP G GTK+LLN L + +++KA+ L A PTTFL + + ++ AL ++ + HA
Sbjct: 157 VAALADA-ELANGEEDETILVEKRAKLFKFVDS-----------------------DYSEVGVGPFRVLK---PKDAQDDDAA--KASARMVMRRESHPHGPGTKLLLNARLSACLSCVKKAEKALMLVIAETDEADKIKPTTFLLRFASQEDLLALQDAVKALLPAHA 296
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A7R9YC94_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YC94_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 6.610e-10 Identity = 45/104 (43.27%), Postives = 62/104 (59.62%), Query Frame = 1
Query: 424 WVEVGIGPVRVLQAQVPPAAGEGAAAAARAP------SRVVMRRESHPGGAGTKVLLNVALRGKVEAASQSDKAVRLTAVLAKGSPPTTFLFKVKTNDEAAALL 717
WVEVGIGP+R+L + ++ + A AP +R+VMRRES PGG GTKV+LNVAL + E +D +RL+ + P T+L +VK D+A LL
Sbjct: 337 WVEVGIGPLRLLTRKTSRSSEGDNSGEAPAPDERQDRARLVMRRESAPGGPGTKVILNVALSTQTEITMLTDTNLRLSCLDGVTKKPATYLVRVKRADQAEELL 440
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A6A3RDJ7_9STRA (RanBD1 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3RDJ7_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 8.370e-10 Identity = 51/154 (33.12%), Postives = 80/154 (51.95%), Query Frame = 1
Query: 277 DVRNGEEGERTLLQVRAKLFRLEAKAAPGXXXXXXXXXXXXXXSDTRPEWVEVGIGPVRVLQAQVPPAAGEGAAAAARAPSRVVMRRESHPGGAGTKVLLNVALRGKVEAASQSDKAVRLTAVLA-------KGSPPTTFLFKVKTNDEAAALL 717
++ NGEEGE+ L++ RAKLF+L K ++ EVGIGP+RVL A G+ ++ +RVVMRRESHP G G+K+L+N +L + +++K + LT + A K P T+L + + D+ A++
Sbjct: 218 ELANGEEGEQILVEKRAKLFKLVEK-----------------------DYAEVGIGPLRVLNATDAKTDGD------KSTARVVMRRESHPHGPGSKLLMNASLGSCLLCEKKTEKTMLLTVLEANEDAEAEKKVVPVTYLMRFGSPDDLDAVM 342
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A2P4XGM7_9STRA (Zinc ion binding protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XGM7_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 6.740e-9 Identity = 49/161 (30.43%), Postives = 82/161 (50.93%), Query Frame = 1
Query: 277 DVRNGEEGERTLLQVRAKLFRLEAKAAPGXXXXXXXXXXXXXXSDTRPEWVEVGIGPVRVLQAQVPPAAGEGAAAAARAPSRVVMRRESHPGGAGTKVLLNVALRGKVEAASQSDKAVRLTAVLA-------KGSPPTTFLFKVKTNDEAAALLRCIREQV 738
++ NGEEGE+ L++ RAKLF+L K ++ EVGIGP+RVL A+ E ++ +R+VMRRES+P G GTK+L+N +L + +++K + LT + A K P T+L + + ++ ++ I+ +
Sbjct: 206 ELANGEEGEQILVEKRAKLFKLVEK-----------------------DYAEVGIGPLRVLDAKDAKIEDE------KSTARIVMRRESYPHGPGTKLLMNASLSSCLLCEKKTEKTMLLTVLEANEDSEAEKKFVPATYLMRFGSPEDLDVVMMRIQTHI 337 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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BLAST of jgi.p|Trimin1|352362 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11296 ID=mRNA_11296|Name=jgi.p|Trimin1|352362|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=575bp|location=Sequence derived from alignment at Contig_116:322769..324384- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CGCATACAGCCATGAGCGACCTGCAAGAAGCAGCGGGCAGTGGCGGAGGGback to top protein sequence of jgi.p|Trimin1|352362 >Trimin1|352362|estExt_Genemark1.C_Ctg_1160055 ID=Trimin1|352362|estExt_Genemark1.C_Ctg_1160055|Name=jgi.p|Trimin1|352362|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=188bp MSDLQEAAGSGGGAVDEKCDSSHKPSCIVQYWKGYQALLITDPLKTKAITback to top mRNA from alignment at Contig_116:322769..324384- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11296 ID=mRNA_11296|Name=jgi.p|Trimin1|352362|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1616bp|location=Sequence derived from alignment at Contig_116:322769..324384- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_116:322769..324384- >mRNA_11296 ID=mRNA_11296|Name=jgi.p|Trimin1|352362|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=564bp|location=Sequence derived from alignment at Contig_116:322769..324384- (Tribonema minus UTEX_B_3156 )back to top |