mRNA_11296 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|352362
Unique NamemRNA_11296
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A836CQ06_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQ06_9STRA)

HSP 1 Score: 385 bits (990), Expect = 1.160e-135
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 3
Query:   12 MSDLQEAAGSGGGAVDEKCDSSHKPSCIVQYWKGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWKACGRSAPTRPCPVDVDI 572
            MSDLQEAAGSGGGAVDEKCDSSHKPSCIVQYWKGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWKACGRSAPTRPCPVDVDI
Sbjct:    1 MSDLQEAAGSGGGAVDEKCDSSHKPSCIVQYWKGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWKACGRSAPTRPCPVDVDI 187          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A836CBT9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT9_9STRA)

HSP 1 Score: 196 bits (498), Expect = 1.480e-60
Identity = 88/144 (61.11%), Postives = 113/144 (78.47%), Query Frame = 3
Query:   90 CIVQYWKGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWK 521
            C+ + W+ Y  LL+  PL TK++TA+ M A GE +G+ L+K+GPGT RER +RL AF VFGLVVNGP FHFWY  LE++A++WSKL+GG  +ILFK+++DRLL+TPPYL LTLVGLRWLQD +L  A+QA   +YK ALL NWK
Sbjct:   21 CLARGWRTYHGLLLEHPLLTKSVTASLMAATGEFVGSYLKKSGPGTPRERARRLGAFAVFGLVVNGPAFHFWYAFLEQLAQRWSKLTGGHHIILFKVIVDRLLMTPPYLVLTLVGLRWLQDFKLLLALQACALVYKSALLLNWK 164          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A6H5L3A8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3A8_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 1.410e-30
Identity = 77/194 (39.69%), Postives = 105/194 (54.12%), Query Frame = 3
Query:   33 AGSGGGAVDE---KCDSSHKPSCIVQYWKGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGP-------GT-----------QRER------LKRLWAFTVFGLVVNGPVFHFWYGTLEKIA---RKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWKA 524
            AG  G AV E   K + + +   +   W  Y+  +   PL TK++T+A + A+GEL G+ LR + P       GT           QR        L+R  AF +FGL+VNGPVFH+WYG LE+ A   RK  +L GG   I FK+ +DR L+TPPYLA+TL  LR LQ      ++  +  +Y+  L TNWKA
Sbjct:   13 AGEWGEAVGERNSKRNEAGEERRLSSPWALYERSMSERPLLTKSVTSALVSALGELAGSALRSSSPPPLPVGAGTALAVKGRAGAGQRTGTAAPGLLRRTAAFAIFGLLVNGPVFHWWYGALERAAARRRKAGELPGGAGDITFKVAVDRFLMTPPYLAITLASLRLLQGLGAKRSIDETSALYRGVLFTNWKA 206          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: D7FXU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU0_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 3.420e-28
Identity = 72/194 (37.11%), Postives = 100/194 (51.55%), Query Frame = 3
Query:   33 AGSGGGAVDEKCDSSH----KPSCIVQYWKGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRER------------------------LKRLWAFTVFGLVVNGPVFHFWYGTLEKIA---RKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWK 521
            AG G  AV E+  S+H    +   +   W  Y+  +   PL TK++T+A + A+GEL+G+ LR + P                              L+R  AF +FGL+VNGPVFH+WYG LE  A   RK  +  GG   I FK+ +DR L+TPPYLA+TL  LR LQ      ++  +  +Y+  L TNWK
Sbjct:   19 AGEGSEAVGER-GSNHSGDGEEQRLSSPWALYKRSMSERPLLTKSVTSALVSALGELMGSALRSSPPXXXXXXXXXXXXXXXXXXXXXXXXXAAPGLLRRTAAFAIFGLLVNGPVFHWWYGALEGAAARRRKAGEPPGGAGDITFKVAVDRFLMTPPYLAITLASLRLLQGLGAKRSIGETSALYRGVLFTNWK 211          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A485LPX3_9STRA (Aste57867_24163 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LPX3_9STRA)

HSP 1 Score: 105 bits (262), Expect = 3.180e-25
Identity = 60/143 (41.96%), Postives = 84/143 (58.74%), Query Frame = 3
Query:   93 IVQYWKGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWK 521
            + +YW  YQ  L   PL+TKA T+A MG  GE++   L+K    T   R  R+ AF ++G VV GP+ H+WYG LE++    +KL+  +     K+L+DRLLLTPP++ALT++ L  L      AA    R +Y   LL NWK
Sbjct:    8 VQEYWAKYQDELREKPLQTKAATSAAMGVCGEVLAHTLKKKPIYTVSFR--RMLAFGLYGGVVTGPIMHYWYGFLERMRSGGNKLTPTQ-----KLLMDRLLLTPPFVALTILMLGVLNGASATAARANLRAVYWTTLLMNWK 143          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: W7TTQ5_9STRA (Peroxisomal membrane protein 2 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTQ5_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.160e-22
Identity = 57/136 (41.91%), Postives = 84/136 (61.76%), Query Frame = 3
Query:  108 KGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTN 515
            + Y   L+T P+ TKA+T+A + A+G+++ +    +G G +    +R   F +FG +V GP+ H+WYG LEK  R    L GG+ V + K+LLD+LL TPP+LALTL  LR L+  R GAA +  + +Y   L TN
Sbjct:   59 RAYHHCLVTRPVLTKALTSAVISALGDILAS----SGKGGRGRSGRRTLGFFLFGGLVTGPLCHYWYGLLEKKVRG---LQGGKNVAM-KVLLDKLLFTPPFLALTLFLLRLLESGRPGAAWRGMKQVYFPTLKTN 186          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A067D856_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067D856_SAPPC)

HSP 1 Score: 97.1 bits (240), Expect = 5.190e-22
Identity = 58/136 (42.65%), Postives = 76/136 (55.88%), Query Frame = 3
Query:  114 YQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWK 521
            YQA L+  PL+TKAIT+A MGA GE++   L+      Q   L+R+  F ++   +  PV H WYG LE+   +  +LS        K+LLDRLLLTPP+LALTL  L  L    + A+    R  Y  AL  NWK
Sbjct:   14 YQAALLKRPLQTKAITSAVMGASGEIVAHGLKYKS--LQGLSLQRVLVFALYSGGITAPVMHAWYGFLEQCRVRGDRLSNNG-----KLLLDRLLLTPPFLALTLFALSLLTGASVAASKALVRSKYVTALWMNWK 142          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A6G0XN93_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XN93_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.250e-21
Identity = 56/136 (41.18%), Postives = 76/136 (55.88%), Query Frame = 3
Query:  114 YQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWK 521
            YQ  L   PL+TKA+T+A MG  GE++   L+K    T    L+R+ AF VFG  + GP+ HFWYG LE++  +  K     Q    K+ LDRL+LTPP++ALT+  L  L    + AA    R  Y   L  NW+
Sbjct:   15 YQKELKERPLRTKALTSASMGICGEILAHVLKKKPIYTVS--LRRVLAFGVFGGAITGPLMHFWYGVLEQVRTRDDKSLTPMQ----KLFLDRLVLTPPFVALTIFALGVLNGASVQAARSNVRATYFSTLFMNWR 144          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A5D6Y4Q1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y4Q1_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 8.020e-21
Identity = 54/140 (38.57%), Postives = 83/140 (59.29%), Query Frame = 3
Query:  105 WKGYQALLITDPLKTKAITAACMGAIGELIGAQLR-KAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWK 521
            W+ YQ  L  +P++TKA+T+A +  +GE++G  L+ K   G     L+++ AF  FG VV GP+ H+WYG LE      SKL+  +     K+LLDRL+ TPP+ ALT+  L  ++   + A+    R ++  ALL NW+
Sbjct:    5 WQEYQVALKKNPVRTKALTSASVAMLGEVLGHFLKHKTLRGLS---LRQMLAFFTFGGVVTGPLLHYWYGLLENQRFTKSKLTPNQ-----KLLLDRLVYTPPFTALTIFSLGVMRGSSVEASKANLRRVFVGALLMNWR 136          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A1V9Z519_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z519_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 3.590e-20
Identity = 65/158 (41.14%), Postives = 83/158 (52.53%), Query Frame = 3
Query:  105 WKGYQALLITDPL--------------KTKAITAACMGAIGELIGAQLR-KAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGI----YKQALLTNWK 521
            W+ YQ  L  +PL              +TKAIT+A MGAIGE+    L+ K   G     L+RL AF  +G  +  PV HFWYG LE++  +  +L+        K+LLDRLLLTPP+LA TL  L  L     GA+  ASR +    Y  AL  NWK
Sbjct:   12 WERYQIALKKNPLEFVQPTGFDSTSSDRTKAITSAAMGAIGEVAAHYLKHKTLHGLS---LRRLMAFAFYGGAITAPVMHFWYGFLEQVRVEGERLTSNG-----KLLLDRLLLTPPFLAATLFSLSVLT----GASTDASRALLRKNYITALWMNWK 157          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A835ZP26_9STRA (RanBD1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZP26_9STRA)

HSP 1 Score: 404 bits (1039), Expect = 5.810e-140
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 1
Query:    1 MWQIGANPFQAALSTFGGGGFGSPSGAVGGIFGGXXXXXXXXXXXXXXXXXXXXXXPVQSDGXXDGTEPGSPEQSLSQEPTVIRVAGLQDPRDVRNGEEGERTLLQVRAKLFRLEAKAAPGXXXXXXXXXXXXXXSDTRPEWVEVGIGPVRVLQAQVPPAAGEGAAAAARAPSRVVMRRESHPGGAGTKVLLNVALRGKVEAASQSDKAVRLTAVLAKGSPPTTFLFKVKTNDEAAALLRCIREQVEQHAQHESGKAD 774
            MWQIGANPFQAALSTFGGGGFGSPSGAVGGIFGGXXXXXXXXXXXXXXXXXXXXXXPVQSDGXXDGTEPGSPEQSLSQEPTVIRVAGLQDPRDVRNGEEGERTLLQVRAKLFRLEAKAAPGXXXXXXXXXXXXXXSDTRPEWVEVGIGPVRVLQAQVPPAAGEGAAAAARAPSRVVMRRESHPGGAGTKVLLNVALRGKVEAASQSDKAVRLTAVLAKGSPPTTFLFKVKTNDEAAALLRCIREQVEQHAQHESGKAD
Sbjct:    1 MWQIGANPFQAALSTFGGGGFGSPSGAVGGIFGGXXXXXXXXXXXXXXXXXXXXXXPVQSDGXXDGTEPGSPEQSLSQEPTVIRVAGLQDPRDVRNGEEGERTLLQVRAKLFRLEAKAAPGXXXXXXXXXXXXXXSDTRPEWVEVGIGPVRVLQAQVPPAAGEGAAAAARAPSRVVMRRESHPGGAGTKVLLNVALRGKVEAASQSDKAVRLTAVLAKGSPPTTFLFKVKTNDEAAALLRCIREQVEQHAQHESGKAD 258          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A7S2K2B0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K2B0_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 2.770e-14
Identity = 69/215 (32.09%), Postives = 92/215 (42.79%), Query Frame = 1
Query:  277 DVRNGEEGERTLLQVRAKLFRLEAKAAPGXXXXXXXXXXXXXXSDTRP-------------------------------------------------EWVEVGIGPVRVLQAQVPPAAGEGAAAAARAPSRVVMRRESHPGGAGTKVLLNVALRGKVEAASQSDKAVRLTAVLAKGSPPTTFLFKVKTNDEAAALLRCIREQVEQHAQHESGKAD 774
            D+ NGEE E  +LQ RAKLFRL  KAA                S   P                                                 EW EVGIGP+RVL+ +         + + +  +R VMRRE HPGG GTKV+LN+ L          +K VRLT V A+G  P  +LFK+KT DE   L++ I   ++  +  E+G+A+
Sbjct:  256 DIANGEEEEECVLQCRAKLFRLCKKAAAAAVPQEAAEGTGLAASHVGPPTLPSAAKNDSVDDSKDEHEXXXXXXXTDAKAAKDGKEIKSDDSSSSGTEWREVGIGPLRVLRTE---------SKSKQITTRCVMRREMHPGGPGTKVILNMKLIKLANIKQSGEKFVRLTTV-AEGGEPVNYLFKLKTVDEVERLIKHIESGIDDAS--ETGEAE 458          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A7S1XJQ4_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJQ4_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.590e-12
Identity = 72/226 (31.86%), Postives = 102/226 (45.13%), Query Frame = 1
Query:  196 GTEPGSPEQSLSQEPT-VIRVAGLQDPRDVRNGEEGERTLLQVRAKLFRL---------------------------EAKAAPGXXXXXXXXXXXXXXSDTRP---------EWVEVGIGPVRVLQAQVPPAAGEGAAAAARAPSRVVMRRESHPGGAGTKVLLNVALRGKVEAASQSDKAVRLTAVLAKGSPPTTFLFKVKTNDEAAALLRCIREQVEQHAQHES 762
            G   G  E   ++EP  V+ +A ++      NGEE E    +VRAKL+R                            EAK   G      X          +          +WVEVGIGP+R+L  +     G+  A       R+VMRRES PGG GTKV+LNVAL  +V    Q + ++RL+ + +  S PTT+L +VK +D+   LL    E+VE   + E+
Sbjct:  211 GGADGGAEPKAAEEPAPVVSLAEVK----TENGEEAEDVAHEVRAKLYRFAPAIVGDEDKESVKLVQSSAVAKASKTEAKEEEGKAEGESXAKDNGAAEAAKDGEAAKVAAMKWVEVGIGPLRLLARRADDEGGKRRA-------RLVMRRESAPGGPGTKVILNVALNEQVAVVKQMETSMRLSCMDSVTSKPTTYLLRVKRSDQCDDLL----EKVESFTKGEN 421          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A7S1Z143_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z143_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 4.430e-11
Identity = 64/190 (33.68%), Postives = 85/190 (44.74%), Query Frame = 1
Query:  277 DVRNGEEGERTLLQVRAKLFRLE-------------------------------AKAAPGXXXXXXXXXXXXXXSDTRPEWVEVGIGPVRVLQAQVPPAAGEGAAAAARAPSRVVMRRESHPGGAGTKVLLNVALRGKVEAASQSDKAVRLTAVLAK----GSPPTT-FLFKVKTNDEAAALLRCIREQV 738
            DV NGEE E  + Q RAKLF+L+                               +   P                + + +W EVGIGPVR+L     P+A           +RVV RRES PGG GTK++LNVALR +     Q+DK VRL  V  +    GS  +  +L+KVKT  EA  L + + E +
Sbjct:  244 DVANGEENETCVFQTRAKLFKLDTTKPSSEPSPQESQDSIGSSMAATSVPPSSSSSLGPKKTNSTDADSKLEESQEEKQQWKEVGIGPVRILTL---PSAST---------TRVVQRRESTPGGPGTKLILNVALRKECHVFRQADKYVRLATVEQEEGEEGSLSSVMYLWKVKTVGEADDLEKFLGEGI 421          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: D0NHN9_PHYIT (RanBD1 domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=D0NHN9_PHYIT)

HSP 1 Score: 73.2 bits (178), Expect = 5.710e-11
Identity = 53/161 (32.92%), Postives = 83/161 (51.55%), Query Frame = 1
Query:  277 DVRNGEEGERTLLQVRAKLFRLEAKAAPGXXXXXXXXXXXXXXSDTRPEWVEVGIGPVRVLQAQVPPAAGEGAAAAARAPSRVVMRRESHPGGAGTKVLLNVALRGKVEAASQSDKAVRLTAVLAKGSP-------PTTFLFKVKTNDEAAALLRCIREQV 738
            ++ NGEEGER L++ RAKLF+L  K                       ++ EVGIGPVRVL A+   A  E      +  +RVVMRRES+P G GTK+L+N +L   +    +++K + LT + A   P       P T+L +  ++++   ++  I+  +
Sbjct:  211 ELANGEEGERILVEKRAKLFKLVEK-----------------------DYTEVGIGPVRVLNAKDAKADDE------KVMARVVMRRESYPHGPGTKLLMNASLGSCLLCEKKTEKTMLLTVLEANEDPEADKKFTPVTYLMRFGSSEDLDVVMMRIQTHM 342          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A5D6YEL9_9STRA (RanBD1 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YEL9_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 2.800e-10
Identity = 56/136 (41.18%), Postives = 72/136 (52.94%), Query Frame = 1
Query:  238 PTVIRVAGLQDPRDVRNGEEGERTLLQVRAKLFRLEAKAAPGXXXXXXXXXXXXXXSDTRPEWVEVGIGPVRVLQAQVPPAAGEGAAAAARAPSRVVMRRESHPGGAGTKVLLNVALRGKVEAASQSDKAVRLTAV 645
            P    V  L D  ++ NGEEGER L++ RAKLF+L  K                       E+ EVGIGP+RVL+      A E AA+A     R+VMRRES+P G GTK+LLN  L   +    ++DKA+ LT V
Sbjct:  192 PESTFVPALTDA-EIANGEEGERILIEKRAKLFKLGDK-----------------------EFAEVGIGPLRVLRL-----ATESAASA-----RLVMRRESYPRGPGTKLLLNARLNACLACIEKTDKAMLLTVV 293          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A8K1FEP6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEP6_PYTOL)

HSP 1 Score: 70.5 bits (171), Expect = 3.230e-10
Identity = 58/169 (34.32%), Postives = 84/169 (49.70%), Query Frame = 1
Query:  253 VAGLQDPRDVRNGEEGERTLLQVRAKLFRLEAKAAPGXXXXXXXXXXXXXXSDTRPEWVEVGIGPVRVLQAQVPPAAGEGAAAAARAPSRVVMRRESHPGGAGTKVLLNVALRGKVEAASQSDKAVRLTAVL---AKGSPPTTFLFKVKTNDEAAALLRCIREQVEQHA 750
            VA L D  ++ NGEE E  L++ RAKLF+                           ++ EVG+GP RVL+   P  A +  AA  +A +R+VMRRESHP G GTK+LLN  L   +    +++KA+ L       A    PTTFL +  + ++  AL   ++  +  HA
Sbjct:  157 VAALADA-ELANGEEDETILVEKRAKLFKFVDS-----------------------DYSEVGVGPFRVLK---PKDAQDDDAA--KASARMVMRRESHPHGPGTKLLLNARLSACLSCVKKAEKALMLVIAETDEADKIKPTTFLLRFASQEDLLALQDAVKALLPAHA 296          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A7R9YC94_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YC94_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 6.610e-10
Identity = 45/104 (43.27%), Postives = 62/104 (59.62%), Query Frame = 1
Query:  424 WVEVGIGPVRVLQAQVPPAAGEGAAAAARAP------SRVVMRRESHPGGAGTKVLLNVALRGKVEAASQSDKAVRLTAVLAKGSPPTTFLFKVKTNDEAAALL 717
            WVEVGIGP+R+L  +   ++    +  A AP      +R+VMRRES PGG GTKV+LNVAL  + E    +D  +RL+ +      P T+L +VK  D+A  LL
Sbjct:  337 WVEVGIGPLRLLTRKTSRSSEGDNSGEAPAPDERQDRARLVMRRESAPGGPGTKVILNVALSTQTEITMLTDTNLRLSCLDGVTKKPATYLVRVKRADQAEELL 440          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A6A3RDJ7_9STRA (RanBD1 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3RDJ7_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 8.370e-10
Identity = 51/154 (33.12%), Postives = 80/154 (51.95%), Query Frame = 1
Query:  277 DVRNGEEGERTLLQVRAKLFRLEAKAAPGXXXXXXXXXXXXXXSDTRPEWVEVGIGPVRVLQAQVPPAAGEGAAAAARAPSRVVMRRESHPGGAGTKVLLNVALRGKVEAASQSDKAVRLTAVLA-------KGSPPTTFLFKVKTNDEAAALL 717
            ++ NGEEGE+ L++ RAKLF+L  K                       ++ EVGIGP+RVL A      G+      ++ +RVVMRRESHP G G+K+L+N +L   +    +++K + LT + A       K   P T+L +  + D+  A++
Sbjct:  218 ELANGEEGEQILVEKRAKLFKLVEK-----------------------DYAEVGIGPLRVLNATDAKTDGD------KSTARVVMRRESHPHGPGSKLLMNASLGSCLLCEKKTEKTMLLTVLEANEDAEAEKKVVPVTYLMRFGSPDDLDAVM 342          
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Match: A0A2P4XGM7_9STRA (Zinc ion binding protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XGM7_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 6.740e-9
Identity = 49/161 (30.43%), Postives = 82/161 (50.93%), Query Frame = 1
Query:  277 DVRNGEEGERTLLQVRAKLFRLEAKAAPGXXXXXXXXXXXXXXSDTRPEWVEVGIGPVRVLQAQVPPAAGEGAAAAARAPSRVVMRRESHPGGAGTKVLLNVALRGKVEAASQSDKAVRLTAVLA-------KGSPPTTFLFKVKTNDEAAALLRCIREQV 738
            ++ NGEEGE+ L++ RAKLF+L  K                       ++ EVGIGP+RVL A+      E      ++ +R+VMRRES+P G GTK+L+N +L   +    +++K + LT + A       K   P T+L +  + ++   ++  I+  +
Sbjct:  206 ELANGEEGEQILVEKRAKLFKLVEK-----------------------DYAEVGIGPLRVLDAKDAKIEDE------KSTARIVMRRESYPHGPGTKLLMNASLSSCLLCEKKTEKTMLLTVLEANEDSEAEKKFVPATYLMRFGSPEDLDVVMMRIQTHI 337          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352362 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CQ06_9STRA1.160e-135100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CBT9_9STRA1.480e-6061.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5L3A8_9PHAE1.410e-3039.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXU0_ECTSI3.420e-2837.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A485LPX3_9STRA3.180e-2541.96Aste57867_24163 protein n=1 Tax=Aphanomyces stella... [more]
W7TTQ5_9STRA1.160e-2241.91Peroxisomal membrane protein 2 n=3 Tax=Monodopsida... [more]
A0A067D856_SAPPC5.190e-2242.65Uncharacterized protein n=3 Tax=Saprolegnia TaxID=... [more]
A0A6G0XN93_9STRA1.250e-2141.18Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A5D6Y4Q1_9STRA8.020e-2138.57Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A1V9Z519_9STRA3.590e-2041.14Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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BLAST of jgi.p|Trimin1|352362 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A835ZP26_9STRA5.810e-140100.00RanBD1 domain-containing protein n=1 Tax=Tribonema... [more]
A0A7S2K2B0_9STRA2.770e-1432.09Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1XJQ4_9STRA1.590e-1231.86Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S1Z143_9STRA4.430e-1133.68Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
D0NHN9_PHYIT5.710e-1132.92RanBD1 domain-containing protein n=12 Tax=Phytopht... [more]
A0A5D6YEL9_9STRA2.800e-1041.18RanBD1 domain-containing protein n=1 Tax=Pythium b... [more]
A0A8K1FEP6_PYTOL3.230e-1034.32Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7R9YC94_9STRA6.610e-1043.27Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6A3RDJ7_9STRA8.370e-1033.12RanBD1 domain-containing protein n=2 Tax=Phytophth... [more]
A0A2P4XGM7_9STRA6.740e-930.43Zinc ion binding protein n=2 Tax=Phytophthora palm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_116contigContig_116:322769..324384 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|352362|estExt_Genemark1.C_Ctg_1160055
BRITEko00000,ko00001
KEGG Pathwayko04146,map04146
KEGG koko:K13347
GOsGO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005778,GO:0005779,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0015267,GO:0015711,GO:0015849,GO:0016020,GO:0016021,GO:0022803,GO:0022857,GO:0031090,GO:0031224,GO:0031231,GO:0031300,GO:0031301,GO:0031903,GO:0032991,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0046942,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0098588,GO:0098805
Preferred namePXMP2
DescriptionBelongs to the peroxisomal membrane protein PXMP2 4 family
COG categoryC
Max annot lvl2759|Eukaryota
EggNOG OGsKOG1944@1|root,KOG1944@2759|Eukaryota
Evalue5.09e-29
Seed ortholog2880.D7FXU0
Hectar predicted targeting categoryother localisation
TranscriptId352684
TrackFilteredModels1
ProteinId352362
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352362gene_11296Tribonema minus UTEX_B_3156 geneContig_116 322769..324384 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352362Trimin1|352362|estExt_Genemark1.C_Ctg_1160055Tribonema minus UTEX_B_3156 polypeptideContig_116 322769..324373 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_11296_2exon_11296_2Tribonema minus UTEX_B_3156 exonContig_116 322769..322822 -
exon_11296_1exon_11296_1Tribonema minus UTEX_B_3156 exonContig_116 323864..324384 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_11296CDS_11296Tribonema minus UTEX_B_3156 CDSContig_116 323864..324373 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_11296UTR5_11296Tribonema minus UTEX_B_3156 five_prime_UTRContig_116 324374..324384 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_11296 ID=mRNA_11296|Name=jgi.p|Trimin1|352362|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=575bp|location=Sequence derived from alignment at Contig_116:322769..324384- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CGCATACAGCCATGAGCGACCTGCAAGAAGCAGCGGGCAGTGGCGGAGGG
GCTGTCGATGAAAAATGCGACAGCAGCCATAAGCCCTCTTGCATCGTGCA
GTACTGGAAGGGCTATCAAGCGCTTCTCATCACAGACCCTCTCAAGACCA
AAGCCATCACTGCAGCCTGCATGGGAGCGATAGGAGAGCTCATAGGGGCG
CAGCTCCGGAAAGCGGGGCCAGGAACGCAGCGGGAGCGGCTCAAAAGGCT
GTGGGCCTTCACAGTGTTTGGGCTTGTGGTCAATGGTCCCGTGTTTCACT
TCTGGTATGGGACCCTAGAAAAGATTGCACGCAAGTGGAGCAAGCTTAGC
GGCGGGCGGCAGGTGATACTGTTCAAGATCCTCTTGGACAGACTGCTGCT
CACGCCGCCATACCTGGCGTTAACGCTGGTCGGGCTCAGGTGGCTGCAAG
ACTGTAGGCTGGGGGCGGCGGTGCAGGCGAGCAGGGGCATATATAAGCAG
GCGCTGCTCACCAACTGGAAGGCCTGCGGGCGCAGCGCACCGACACGCCC
TTGCCCGGTGGACGTGGACATATGA
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protein sequence of jgi.p|Trimin1|352362

>Trimin1|352362|estExt_Genemark1.C_Ctg_1160055 ID=Trimin1|352362|estExt_Genemark1.C_Ctg_1160055|Name=jgi.p|Trimin1|352362|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=188bp
MSDLQEAAGSGGGAVDEKCDSSHKPSCIVQYWKGYQALLITDPLKTKAIT
AACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYG
TLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRL
GAAVQASRGIYKQALLTNWKACGRSAPTRPCPVDVDI*
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mRNA from alignment at Contig_116:322769..324384-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_11296 ID=mRNA_11296|Name=jgi.p|Trimin1|352362|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1616bp|location=Sequence derived from alignment at Contig_116:322769..324384- (Tribonema minus UTEX_B_3156 )
CGCATACAGCCATGAGCGACCTGCAAGAAGCAGCGGGCAGTGGCGGAGGG GCTGTCGATGAAAAATGCGACAGCAGCCATAAGCCCTCTTGCATCGTGCA GTACTGGAAGGGCTATCAAGCGCTTCTCATCACAGACCCTCTCAAGACCA AAGCCATCACTGCAGCCTGCATGGGAGCGATAGGAGAGCTCATAGGGGCG CAGCTCCGGAAAGCGGGGCCAGGAACGCAGCGGGAGCGGCTCAAAAGGCT GTGGGCCTTCACAGTGTTTGGGCTTGTGGTCAATGGTCCCGTGTTTCACT TCTGGTATGGGACCCTAGAAAAGATTGCACGCAAGTGGAGCAAGCTTAGC GGCGGGCGGCAGGTGATACTGTTCAAGATCCTCTTGGACAGACTGCTGCT CACGCCGCCATACCTGGCGTTAACGCTGGTCGGGCTCAGGTGGCTGCAAG ACTGTAGGCTGGGGGCGGCGGTGCAGGCGAGCAGGGGCATATATAAGCAG GCGCTGCTCACCAACTGGAAGGTATGGACAGCAGCTCAGATCATAAACTT CAACTATGTTCCGGTGGAGCTACGCACCCTCTTCGGAAATGCCGTAGCAA TTATCTGGAACGCATACCTGAGTCTCACAGGGTAGTCGTCGTAACGTGCG GCAATCCTGAGAGTGTACAAAGTTGTACGCTGGGCGAAACAGAGTGCTCG CCATCCGTATGCCAACACACACGCACACACACACCGCCTTGTCAAATGAA CGCTAGTGTCTACACTCATCGCCGCAGTGATGCTGCTTGTGCACCTGTCT TTACCATCACAGCACGTCCATGATTGCTTGGCCATGCTTGTCATTGTGTT GTGGCACTGTGCGCTTGCTTCGTCGCTTTGAGCAGTGGGACAGCTTTGCC CTATCTCTGGCCTGTCTCACTCGTGTCACCATCAACTGGCATATTTCAGA ACACACAATGTGGCACACAGATTACTGCAGGCTGCACTGTTAAAAAGGTG CACGCACGATGCGAATGGGATTGATGCAGCAGACCAGAAATAAGCTGAAC ACTTACAAGTACTTGTATGTAGGACCAGCGAGTGCTGTATGCTGCAGTTT CACAACGCAAGTATGTGCGACCAGCGAGTGCTGTATGCTGCAGTTTCACA ACGCAAGCATCCTTCGGTAAAGCCTGTATCAAGCAACCAAAAATTGGGCT GACTTGAACACTGACGACAGGCAGTGCTGCAGAGCATGCTCATTGCAACA ATAACAACACAGGCAGCCTCGCAATGGCCACAAGGCTGCACACAACATTG AAAAACCTCTGTGGACGCTTTGGTCGTACTTCGAAGTACATTAGAGAGCT TATTGTCCGCCACTCTGCCATTATATCATCAAGCCTTGAACAGAGGTAGG CTCTTCACCACGTAAATGCAGCCAGGATGCACGCAGTGACTGACTTCAGC TGCGCCTGCCTCACGGCTCAGACGCTGCGTCTTCGTCCAGGTCAAGCCAT TCCAAAGTACTTGGTGGAAGTATGTGCGGGCTGTGAGGCACCGGTACCGC TCCTTCTCTCAGGCCTGCGGGCGCAGCGCACCGACACGCCCTTGCCCGGT GGACGTGGACATATGA
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Coding sequence (CDS) from alignment at Contig_116:322769..324384-

>mRNA_11296 ID=mRNA_11296|Name=jgi.p|Trimin1|352362|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=564bp|location=Sequence derived from alignment at Contig_116:322769..324384- (Tribonema minus UTEX_B_3156 )
ATGAGCGACCTGCAAGAAGCAGCGGGCAGTGGCGGAGGGGCTGTCGATGA
AAAATGCGACAGCAGCCATAAGCCCTCTTGCATCGTGCAGTACTGGAAGG
GCTATCAAGCGCTTCTCATCACAGACCCTCTCAAGACCAAAGCCATCACT
GCAGCCTGCATGGGAGCGATAGGAGAGCTCATAGGGGCGCAGCTCCGGAA
AGCGGGGCCAGGAACGCAGCGGGAGCGGCTCAAAAGGCTGTGGGCCTTCA
CAGTGTTTGGGCTTGTGGTCAATGGTCCCGTGTTTCACTTCTGGTATGGG
ACCCTAGAAAAGATTGCACGCAAGTGGAGCAAGCTTAGCGGCGGGCGGCA
GGTGATACTGTTCAAGATCCTCTTGGACAGACTGCTGCTCACGCCGCCAT
ACCTGGCGTTAACGCTGGTCGGGCTCAGGTGGCTGCAAGACTGTAGGCTG
GGGGCGGCGGTGCAGGCGAGCAGGGGCATATATAAGCAGGCGCTGCTCAC
CAACTGGAAGGCCTGCGGGCGCAGCGCACCGACACGCCCTTGCCCGGTGG
ACGTGGACATATGA
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