Trimin1|351974|estExt_Genemark1.C_Ctg_1040067 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351974
Unique NameTrimin1|351974|estExt_Genemark1.C_Ctg_1040067
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length279
Homology
BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: A0A835ZGC0_9STRA (Smr domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGC0_9STRA)

HSP 1 Score: 505 bits (1301), Expect = 4.270e-180
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
Query:    1 MDAFIKGLRFVVKTLLECTSSTNVAEPQDQQQQQQSGKTYDPQQDYKAPDSEEQEQYKPVRPTSTGDVEIGRLTRYDSNICDFKQFDSQGNRIFPEADACREEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANARAVRAIVDPQRAEETGCLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVITGAGNHSTNHKAKIKHGRVITAPNHKAKIXXXXXXXXXXXXXXXQRAKPMVEDMLRDMQFNFHSKNEGAYVITLSSRQ 278
            MDAFIKGLRFVVKTLLECTSSTNVAEPQDQQQQQQSGKTYDPQQDYKAPDSEEQEQYKPVRPTSTGDVEIGRLTRYDSNICDFKQFDSQGNRIFPEADACREEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANARAVRAIVDPQRAEETGCLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVITGAGNHSTNHKAKIKHGRVITAPNHKAKIXXXXXXXXXXXXXXXQRAKPMVEDMLRDMQFNFHSKNEGAYVITLSSRQ
Sbjct:    1 MDAFIKGLRFVVKTLLECTSSTNVAEPQDQQQQQQSGKTYDPQQDYKAPDSEEQEQYKPVRPTSTGDVEIGRLTRYDSNICDFKQFDSQGNRIFPEADACREEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANARAVRAIVDPQRAEETGCLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVITGAGNHSTNHKAKIKHGRVITAPNHKAKIXXXXXXXXXXXXXXXQRAKPMVEDMLRDMQFNFHSKNEGAYVITLSSRQ 278          
BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: A0A8H7K8V2_BIOOC (Smr domain-containing protein n=2 Tax=Bionectria ochroleuca TaxID=29856 RepID=A0A8H7K8V2_BIOOC)

HSP 1 Score: 93.6 bits (231), Expect = 4.520e-19
Identity = 70/183 (38.25%), Postives = 91/183 (49.73%), Query Frame = 0
Query:   96 EADACREEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANARAVRAIVDPQRAE---ETGCLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVITGAGNHSTNHKAKIKHGRVITAPNHKAKIXXXXXXXXXXXXXXXQRAKPMVEDMLRDMQFNFHSK-NEGAYVITL 274
            E D  R+ A  EA+ R  C+D+S+ AYN GDGA+AKELSN+GK H R+M+E N +A + I     A    E   +DLHG  V EAE + R  + + R RGQ   L VI G GNHS  H                                  QR KP VEDM R++  ++ ++ NEG   I L
Sbjct:   24 EYDRLRDLARSEAEKRNSCFDRSKRAYNNGDGAEAKELSNQGKAHDRKMDEYNLQASQLIFRENNAPGRVEADQIDLHGQFVEEAERILRQRIGEDRARGQHH-LHVIVGKGNHSAGH---------------------------------VQRLKPKVEDMCRELGLDYRTEENEGRIFINL 172          
BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: A0A1S9DQP4_ASPOZ (Smr domain-containing protein n=20 Tax=Aspergillus TaxID=5052 RepID=A0A1S9DQP4_ASPOZ)

HSP 1 Score: 93.2 bits (230), Expect = 6.530e-19
Identity = 62/123 (50.41%), Postives = 73/123 (59.35%), Query Frame = 0
Query:   96 EADACREEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANARAVRAIVDPQRAE---ETGCLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVITGAGNHSTNHKAKIK 215
            E D  R  A  EA+ RG C+ +SQEAY+AGDGAKAKELS +GK HGR+M E N +A   I     AE   E   +DLHG  V EAE +  + +   R  GQ   L VI G GNHS NH  KIK
Sbjct:   23 EYDRLRGLAREEAEKRGSCFQRSQEAYSAGDGAKAKELSEQGKAHGRKMAEYNKQASEFIFRENNAEGRVEPDTIDLHGQFVEEAEEILEERIKYAREHGQTH-LHVIVGKGNHSANHVQKIK 144          
BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: A0A1L9P5I6_ASPVE (Smr domain-containing protein n=2 Tax=Aspergillus subgen. Nidulantes TaxID=2720870 RepID=A0A1L9P5I6_ASPVE)

HSP 1 Score: 92.8 bits (229), Expect = 7.470e-19
Identity = 61/131 (46.56%), Postives = 76/131 (58.02%), Query Frame = 0
Query:   88 SQGNRIFPEADACREEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANARAVRAIVDPQRAE---ETGCLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVITGAGNHSTNHKAKIK 215
            +Q N    E D  R  A +EA  RG C+ +SQEAY++GDGA AKELS +GK HGR+M+E N +A   I     A    E   +DLHG  V EAE +  + +   R+ GQ   L VI G GNHS NH  KIK
Sbjct:   15 TQSNDAEAEYDRLRNLARQEASKRGNCFQRSQEAYSSGDGAAAKELSEQGKAHGRKMDEYNRQASEFIFKENNAAGRVEADTIDLHGQFVEEAEDILEERIKYARSHGQ-NHLHVIVGKGNHSANHVQKIK 144          
BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: UPI0015C2F52F (SMR protein n=1 Tax=Geosmithia morbida TaxID=1094350 RepID=UPI0015C2F52F)

HSP 1 Score: 90.9 bits (224), Expect = 7.600e-19
Identity = 58/123 (47.15%), Postives = 74/123 (60.16%), Query Frame = 0
Query:   96 EADACREEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANARAVRAIVDPQRAE---ETGCLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVITGAGNHSTNHKAKIK 215
            E D  R+ A  EA+ RGECY++S+ AY  GDGA+AKE SN+GK H R+M+E N +A   I     A    E+  +DLHGL V EAE +    +   ++ GQ E L  I G GNHST H  KIK
Sbjct:   26 EYDRLRDLARDEARKRGECYEKSKRAYEDGDGARAKEYSNQGKAHDRKMDEYNEQAANFIFRANNAPGRVESDAIDLHGLFVEEAERILEQRIRADQSSGQ-EHLHAIVGKGNHSTGHVQKIK 147          
BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: S7Z966_PENO1 (Smr domain-containing protein n=2 Tax=Penicillium TaxID=5073 RepID=S7Z966_PENO1)

HSP 1 Score: 92.0 bits (227), Expect = 1.750e-18
Identity = 58/123 (47.15%), Postives = 77/123 (62.60%), Query Frame = 0
Query:   96 EADACREEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANARAVRAIVDPQRAE---ETGCLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVITGAGNHSTNHKAKIK 215
            E D  R+ A +EA  RG+C+ +S+EAYN GDGA+AKELS +GK HGR+MEE N +A   I     A+   E   +DLHG  V EAE +  + +   ++ GQ + L VI G GNHS+ H  KIK
Sbjct:   24 EYDRLRDLARQEASKRGDCFQRSKEAYNNGDGARAKELSEQGKAHGRKMEEYNKQASEFIFRENNADGRVEADTIDLHGQFVEEAEEILEERIRYAKSHGQ-DHLHVIVGKGNHSSGHIQKIK 145          
BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: A0A1Q8RAV8_9PEZI (Mitochondrial import inner membrane translocase subunit TIM9 n=1 Tax=Colletotrichum chlorophyti TaxID=708187 RepID=A0A1Q8RAV8_9PEZI)

HSP 1 Score: 92.0 bits (227), Expect = 2.070e-18
Identity = 60/136 (44.12%), Postives = 80/136 (58.82%), Query Frame = 0
Query:   83 FKQFDSQGNRIFPEADACREEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANARAVRAIVDPQRA--EETG-CLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVITGAGNHSTNHKAKIK 215
            F   D+  + +  E D  R+ A +EA  R  C+++SQ+AY AGDGA AKELSN+GK H +RME+ N +A   I     A    TG C+DLHG  V EAE +  + +   + RGQ + L  I G GNHST H  K+K
Sbjct:   13 FHHADNDDDEVEREYDRLRDLARQEADKRSSCFERSQQAYQAGDGAAAKELSNEGKRHAQRMEDYNRQASEYIFRENNAPGRVTGSCIDLHGQFVEEAERILEERIRADKARGQ-DHLHAIVGKGNHSTGHVQKLK 147          
BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: A0A084G2Q5_PSEDA (Smr domain-containing protein n=1 Tax=Pseudallescheria apiosperma TaxID=563466 RepID=A0A084G2Q5_PSEDA)

HSP 1 Score: 91.3 bits (225), Expect = 2.850e-18
Identity = 57/126 (45.24%), Postives = 76/126 (60.32%), Query Frame = 0
Query:   93 IFPEADACREEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANARAVRAIVDPQRAE---ETGCLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVITGAGNHSTNHKAKIK 215
            I  E D  R+ A  EA+ R +C+ +S++AY  GDGA+AKELSN+GK H  +M++ N +A   I     AE   +  C+DLHGL V EAE +  D +   R+RG    L VI G GNHS NH  KI+
Sbjct:   21 IEAEYDRLRDLAREEAEKRNDCFARSRQAYENGDGARAKELSNEGKRHASKMDDYNRQAADFIFRENNAEGRVDEDCIDLHGLFVEEAERILEDRIRAERSRGA-SHLHVIVGKGNHSANHVQKIR 145          
BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: A0A1U8QYA9_EMENI (Smr domain-containing protein n=3 Tax=Aspergillus TaxID=5052 RepID=A0A1U8QYA9_EMENI)

HSP 1 Score: 90.9 bits (224), Expect = 3.880e-18
Identity = 61/131 (46.56%), Postives = 76/131 (58.02%), Query Frame = 0
Query:   88 SQGNRIFPEADACREEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANARAVRAIVDPQRAE---ETGCLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVITGAGNHSTNHKAKIK 215
            SQ N    E D  R+ A +EA  R  C+ +SQEAY +GDGA AKELS +GK HGR+MEE N +A   I     A    +   +DLHG  V EAE +  + +   R++GQ   L VI G GNHS NH  KIK
Sbjct:   17 SQSNDAESEYDRLRDLARQEASKRNSCFQRSQEAYASGDGAAAKELSEQGKAHGRKMEEYNRQASEFIFRENNAPGRVDADTIDLHGQFVEEAEDILEERIKYARSQGQTH-LHVIVGKGNHSANHVQKIK 146          
BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: A0A059IYM6_TRIIM (Smr domain-containing protein n=10 Tax=Arthrodermataceae TaxID=34384 RepID=A0A059IYM6_TRIIM)

HSP 1 Score: 90.9 bits (224), Expect = 4.970e-18
Identity = 58/123 (47.15%), Postives = 74/123 (60.16%), Query Frame = 0
Query:   96 EADACREEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANARAVRAIVDPQRAE---ETGCLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVITGAGNHSTNHKAKIK 215
            E D  R  A  EA+LRG C+D+S++AY  GDG +AKELS +GK+HGR+ME+ N +A   I     AE       +DLHG  V EAE +  + +   R  GQ + L VI G GNHS NH  KIK
Sbjct:   21 EYDRLRGLARHEAELRGSCFDRSRQAYENGDGQRAKELSEEGKEHGRKMEQYNKQASEFIFRENNAEGRVAADTIDLHGQFVEEAEDILEERIKYARQHGQ-DHLHVIVGKGNHSVNHVQKIK 142          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351974 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZGC0_9STRA4.270e-180100.00Smr domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A8H7K8V2_BIOOC4.520e-1938.25Smr domain-containing protein n=2 Tax=Bionectria o... [more]
A0A1S9DQP4_ASPOZ6.530e-1950.41Smr domain-containing protein n=20 Tax=Aspergillus... [more]
A0A1L9P5I6_ASPVE7.470e-1946.56Smr domain-containing protein n=2 Tax=Aspergillus ... [more]
UPI0015C2F52F7.600e-1947.15SMR protein n=1 Tax=Geosmithia morbida TaxID=10943... [more]
S7Z966_PENO11.750e-1847.15Smr domain-containing protein n=2 Tax=Penicillium ... [more]
A0A1Q8RAV8_9PEZI2.070e-1844.12Mitochondrial import inner membrane translocase su... [more]
A0A084G2Q5_PSEDA2.850e-1845.24Smr domain-containing protein n=1 Tax=Pseudallesch... [more]
A0A1U8QYA9_EMENI3.880e-1846.56Smr domain-containing protein n=3 Tax=Aspergillus ... [more]
A0A059IYM6_TRIIM4.970e-1847.15Smr domain-containing protein n=10 Tax=Arthroderma... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 130..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..42
NoneNo IPR availablePANTHERPTHR47417SMR DOMAIN-CONTAINING PROTEIN YPL199Ccoord: 226..276
coord: 36..215
IPR002625Smr domainSMARTSM00463SMR_2coord: 164..233
e-value: 2.0E-5
score: 34.0
IPR002625Smr domainPFAMPF01713Smrcoord: 167..213
e-value: 9.0E-9
score: 35.6
IPR002625Smr domainPROSITEPS50828SMRcoord: 167..215
score: 14.46081
IPR013899Domain of unknown function DUF1771SMARTSM01162DUF1771_2coord: 96..161
e-value: 7.4E-22
score: 88.6
IPR013899Domain of unknown function DUF1771PFAMPF08590DUF1771coord: 99..157
e-value: 1.0E-20
score: 73.9
IPR036063Smr domain superfamilyGENE3D3.30.1370.110coord: 144..221
e-value: 5.2E-15
score: 57.4
IPR036063Smr domain superfamilySUPERFAMILY160443SMR domain-likecoord: 166..216
IPR036063Smr domain superfamilySUPERFAMILY160443SMR domain-likecoord: 227..274

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_104contigContig_104:421689..426148 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351974mRNA_10231Tribonema minus UTEX_B_3156 mRNAContig_104 421676..426201 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351974|estExt_Genemark1.C_Ctg_1040067 ID=Trimin1|351974|estExt_Genemark1.C_Ctg_1040067|Name=jgi.p|Trimin1|351974|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=279bp
MDAFIKGLRFVVKTLLECTSSTNVAEPQDQQQQQQSGKTYDPQQDYKAPD
SEEQEQYKPVRPTSTGDVEIGRLTRYDSNICDFKQFDSQGNRIFPEADAC
REEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANAR
AVRAIVDPQRAEETGCLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVI
TGAGNHSTNHKAKIKHGRVITAPNHKAKIKELEAITGKGNDGINQRAKPM
VEDMLRDMQFNFHSKNEGAYVITLSSRQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002625Smr_dom
IPR013899DUF1771
IPR036063Smr_dom_sf