mRNA_10231 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|351974
Unique Name	mRNA_10231
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: A0A835ZGC0_9STRA (Smr domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGC0_9STRA)

HSP 1 Score: 504 bits (1297), Expect = 4.030e-179
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 2

Query:   14 MDAFIKGLRFVVKTLLECTSSTNVAEPQDQQQQQQSGKTYDPQQDYKAPDSEEQEQYKPVRPTSTGDVEIGRLTRYDSNICDFKQFDSQGNRIFPEADACREEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANARAVRAIVDPQRAEETGCLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVITGAGNHSTNHKAKIKHGRVITAPNHKAKIXXXXXXXXXXXXXXXQRAKPMVEDMLRDMQFNFHSKNEGAYVITLSSRQ 847
            MDAFIKGLRFVVKTLLECTSSTNVAEPQDQQQQQQSGKTYDPQQDYKAPDSEEQEQYKPVRPTSTGDVEIGRLTRYDSNICDFKQFDSQGNRIFPEADACREEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANARAVRAIVDPQRAEETGCLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVITGAGNHSTNHKAKIKHGRVITAPNHKAKIXXXXXXXXXXXXXXXQRAKPMVEDMLRDMQFNFHSKNEGAYVITLSSRQ
Sbjct:    1 MDAFIKGLRFVVKTLLECTSSTNVAEPQDQQQQQQSGKTYDPQQDYKAPDSEEQEQYKPVRPTSTGDVEIGRLTRYDSNICDFKQFDSQGNRIFPEADACREEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANARAVRAIVDPQRAEETGCLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVITGAGNHSTNHKAKIKHGRVITAPNHKAKIXXXXXXXXXXXXXXXQRAKPMVEDMLRDMQFNFHSKNEGAYVITLSSRQ 278

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BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: A0A1S9DQP4_ASPOZ (Smr domain-containing protein n=20 Tax=Aspergillus TaxID=5052 RepID=A0A1S9DQP4_ASPOZ)

HSP 1 Score: 93.2 bits (230), Expect = 9.780e-19
Identity = 62/123 (50.41%), Postives = 73/123 (59.35%), Query Frame = 2

Query:  299 EADACREEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANARAVRAIVDPQRAE---ETGCLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVITGAGNHSTNHKAKIK 658
            E D  R  A  EA+ RG C+ +SQEAY+AGDGAKAKELS +GK HGR+M E N +A   I     AE   E   +DLHG  V EAE +  + +   R  GQ   L VI G GNHS NH  KIK
Sbjct:   23 EYDRLRGLAREEAEKRGSCFQRSQEAYSAGDGAKAKELSEQGKAHGRKMAEYNKQASEFIFRENNAEGRVEPDTIDLHGQFVEEAEEILEERIKYAREHGQTH-LHVIVGKGNHSANHVQKIK 144

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BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: A0A1L9P5I6_ASPVE (Smr domain-containing protein n=2 Tax=Aspergillus subgen. Nidulantes TaxID=2720870 RepID=A0A1L9P5I6_ASPVE)

HSP 1 Score: 92.8 bits (229), Expect = 1.120e-18
Identity = 61/131 (46.56%), Postives = 76/131 (58.02%), Query Frame = 2

Query:  275 SQGNRIFPEADACREEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANARAVRAIVDPQRAE---ETGCLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVITGAGNHSTNHKAKIK 658
            +Q N    E D  R  A +EA  RG C+ +SQEAY++GDGA AKELS +GK HGR+M+E N +A   I     A    E   +DLHG  V EAE +  + +   R+ GQ   L VI G GNHS NH  KIK
Sbjct:   15 TQSNDAEAEYDRLRNLARQEASKRGNCFQRSQEAYSSGDGAAAKELSEQGKAHGRKMDEYNRQASEFIFKENNAAGRVEADTIDLHGQFVEEAEDILEERIKYARSHGQ-NHLHVIVGKGNHSANHVQKIK 144

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BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: UPI0015C2F52F (SMR protein n=1 Tax=Geosmithia morbida TaxID=1094350 RepID=UPI0015C2F52F)

HSP 1 Score: 90.9 bits (224), Expect = 1.120e-18
Identity = 58/123 (47.15%), Postives = 74/123 (60.16%), Query Frame = 2

Query:  299 EADACREEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANARAVRAIVDPQRAE---ETGCLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVITGAGNHSTNHKAKIK 658
            E D  R+ A  EA+ RGECY++S+ AY  GDGA+AKE SN+GK H R+M+E N +A   I     A    E+  +DLHGL V EAE +    +   ++ GQ E L  I G GNHST H  KIK
Sbjct:   26 EYDRLRDLARDEARKRGECYEKSKRAYEDGDGARAKEYSNQGKAHDRKMDEYNEQAANFIFRANNAPGRVESDAIDLHGLFVEEAERILEQRIRADQSSGQ-EHLHAIVGKGNHSTGHVQKIK 147

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BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: A0A8H7K8V2_BIOOC (Smr domain-containing protein n=2 Tax=Bionectria ochroleuca TaxID=29856 RepID=A0A8H7K8V2_BIOOC)

HSP 1 Score: 92.4 bits (228), Expect = 1.810e-18
Identity = 70/183 (38.25%), Postives = 91/183 (49.73%), Query Frame = 2

Query:  299 EADACREEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANARAVRAIVDPQRAE---ETGCLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVITGAGNHSTNHKAKIKHGRVITAPNHKAKIXXXXXXXXXXXXXXXQRAKPMVEDMLRDMQFNFHSK-NEGAYVITL 835
            E D  R+ A  EA+ R  C+D+S+ AYN GDGA+AKELSN+GK H R+M+E N +A + I     A    E   +DLHG  V EAE + R  + + R RGQ   L VI G GNHS  H                                  QR KP VEDM R++  ++ ++ NEG   I L
Sbjct:   24 EYDRLRDLARSEAEKRNSCFDRSKRAYNNGDGAEAKELSNQGKAHDRKMDEYNLQASQLIFRENNAPGRVEADQIDLHGQFVEEAERILRQRIGEDRARGQHH-LHVIVGKGNHSAGH---------------------------------VQRLKPKVEDMCRELGLDYRTEENEGRIFINL 172

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BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: S7Z966_PENO1 (Smr domain-containing protein n=2 Tax=Penicillium TaxID=5073 RepID=S7Z966_PENO1)

HSP 1 Score: 92.0 bits (227), Expect = 2.610e-18
Identity = 58/123 (47.15%), Postives = 77/123 (62.60%), Query Frame = 2

Query:  299 EADACREEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANARAVRAIVDPQRAE---ETGCLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVITGAGNHSTNHKAKIK 658
            E D  R+ A +EA  RG+C+ +S+EAYN GDGA+AKELS +GK HGR+MEE N +A   I     A+   E   +DLHG  V EAE +  + +   ++ GQ + L VI G GNHS+ H  KIK
Sbjct:   24 EYDRLRDLARQEASKRGDCFQRSKEAYNNGDGARAKELSEQGKAHGRKMEEYNKQASEFIFRENNADGRVEADTIDLHGQFVEEAEEILEERIRYAKSHGQ-DHLHVIVGKGNHSSGHIQKIK 145

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BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: A0A1Q8RAV8_9PEZI (Mitochondrial import inner membrane translocase subunit TIM9 n=1 Tax=Colletotrichum chlorophyti TaxID=708187 RepID=A0A1Q8RAV8_9PEZI)

HSP 1 Score: 92.0 bits (227), Expect = 3.090e-18
Identity = 60/136 (44.12%), Postives = 80/136 (58.82%), Query Frame = 2

Query:  260 FKQFDSQGNRIFPEADACREEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANARAVRAIVDPQRA--EETG-CLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVITGAGNHSTNHKAKIK 658
            F   D+  + +  E D  R+ A +EA  R  C+++SQ+AY AGDGA AKELSN+GK H +RME+ N +A   I     A    TG C+DLHG  V EAE +  + +   + RGQ + L  I G GNHST H  K+K
Sbjct:   13 FHHADNDDDEVEREYDRLRDLARQEADKRSSCFERSQQAYQAGDGAAAKELSNEGKRHAQRMEDYNRQASEYIFRENNAPGRVTGSCIDLHGQFVEEAERILEERIRADKARGQ-DHLHAIVGKGNHSTGHVQKLK 147

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BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: A0A084G2Q5_PSEDA (Smr domain-containing protein n=1 Tax=Pseudallescheria apiosperma TaxID=563466 RepID=A0A084G2Q5_PSEDA)

HSP 1 Score: 91.3 bits (225), Expect = 4.220e-18
Identity = 57/126 (45.24%), Postives = 76/126 (60.32%), Query Frame = 2

Query:  290 IFPEADACREEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANARAVRAIVDPQRAE---ETGCLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVITGAGNHSTNHKAKIK 658
            I  E D  R+ A  EA+ R +C+ +S++AY  GDGA+AKELSN+GK H  +M++ N +A   I     AE   +  C+DLHGL V EAE +  D +   R+RG    L VI G GNHS NH  KI+
Sbjct:   21 IEAEYDRLRDLAREEAEKRNDCFARSRQAYENGDGARAKELSNEGKRHASKMDDYNRQAADFIFRENNAEGRVDEDCIDLHGLFVEEAERILEDRIRAERSRGA-SHLHVIVGKGNHSANHVQKIR 145

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BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: A0A1U8QYA9_EMENI (Smr domain-containing protein n=3 Tax=Aspergillus TaxID=5052 RepID=A0A1U8QYA9_EMENI)

HSP 1 Score: 90.9 bits (224), Expect = 5.730e-18
Identity = 61/131 (46.56%), Postives = 76/131 (58.02%), Query Frame = 2

Query:  275 SQGNRIFPEADACREEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANARAVRAIVDPQRAE---ETGCLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVITGAGNHSTNHKAKIK 658
            SQ N    E D  R+ A +EA  R  C+ +SQEAY +GDGA AKELS +GK HGR+MEE N +A   I     A    +   +DLHG  V EAE +  + +   R++GQ   L VI G GNHS NH  KIK
Sbjct:   17 SQSNDAESEYDRLRDLARQEASKRNSCFQRSQEAYASGDGAAAKELSEQGKAHGRKMEEYNRQASEFIFRENNAPGRVDADTIDLHGQFVEEAEDILEERIKYARSQGQTH-LHVIVGKGNHSANHVQKIK 146

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BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: A0A059IYM6_TRIIM (Smr domain-containing protein n=10 Tax=Arthrodermataceae TaxID=34384 RepID=A0A059IYM6_TRIIM)

HSP 1 Score: 90.9 bits (224), Expect = 7.340e-18
Identity = 58/123 (47.15%), Postives = 74/123 (60.16%), Query Frame = 2

Query:  299 EADACREEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANARAVRAIVDPQRAE---ETGCLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVITGAGNHSTNHKAKIK 658
            E D  R  A  EA+LRG C+D+S++AY  GDG +AKELS +GK+HGR+ME+ N +A   I     AE       +DLHG  V EAE +  + +   R  GQ + L VI G GNHS NH  KIK
Sbjct:   21 EYDRLRGLARHEAELRGSCFDRSRQAYENGDGQRAKELSEEGKEHGRKMEQYNKQASEFIFRENNAEGRVAADTIDLHGQFVEEAEDILEERIKYARQHGQ-DHLHVIVGKGNHSVNHVQKIK 142

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BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: A0A836C863_9STRA (Surp module-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C863_9STRA)

HSP 1 Score: 617 bits (1592), Expect = 4.580e-221
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 1

Query:    1 MSAAVASSLPVPGPGAAAPEQDGSSSNGGAADVEAASQGKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGRDTPAGAPAAPXXXXXXXXXXXADGEAKEPGKATAAAAVQKKAVMAPIAKAARTIAKDVKPPPFVFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKAAAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVETIDFPEDELTGVTYGTMDEEQDVEMDMKE 1056
            MSAAVASSLPVPGPGAAAPEQDGSSSNGGAADVEAASQGKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGRDTPAGAPAAPXXXXXXXXXXXADGEAKEPGKATAAAAVQKKAVMAPIAKAARTIAKDVKPPPFVFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKAAAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVETIDFPEDELTGVTYGTMDEEQDVEMDMKE
Sbjct:    1 MSAAVASSLPVPGPGAAAPEQDGSSSNGGAADVEAASQGKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGRDTPAGAPAAPXXXXXXXXXXXADGEAKEPGKATAAAAVQKKAVMAPIAKAARTIAKDVKPPPFVFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKAAAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVETIDFPEDELTGVTYGTMDEEQDVEMDMKE 352

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BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: D7FWN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWN9_ECTSI)

HSP 1 Score: 326 bits (836), Expect = 4.050e-103
Identity = 198/316 (62.66%), Postives = 227/316 (71.84%), Query Frame = 1

Query:   76 SNGGAADVEAASQGKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGRDTPAGAPAAPXXXXXXXXXXXADGE---------AKEPGKATAAAAVQKKAVMAPIAKAARTIAKDVKPPPFVFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKAAAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVETIDFPEDEL 996
            SNGG   VE   QGKVKGII PPP+IRAI DKTARFVAKNGKSFE+RI  SEEG+SAKFNFMRPHDPYYAYYE+KIR+ EE  D P  APA   XXXXXXXXXX             A +  K  A A+V +KAVMAPIAKA +++ K  +P  F FS GHPTGLTA D+DLIKLTAQ+TA GGR FLA LA++EA+NE FQFLK  HALFSYF                   TSLVDAYTKVLQPT  Q+A  ++G  RQ  LER VHRWE+DR ++ K++A  A  DAD++AFRSIDW DFVVVETI+FP+DEL
Sbjct:   44 SNGG---VEQPYQGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPRAAPATAAXXXXXXXXXXXXXXXXXXXXXXXAGKSDKKAAPASVSRKAVMAPIAKAVKSLNKATEPRAFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYF-------------------TSLVDAYTKVLQPTATQRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVETIEFPDDEL 337

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BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: A0A4D9CLT9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CLT9_9STRA)

HSP 1 Score: 268 bits (685), Expect = 1.330e-79
Identity = 156/305 (51.15%), Postives = 203/305 (66.56%), Query Frame = 1

Query:  115 GKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGR-DTPAGAPAAPXXXXXXXXXXXADGEA-----KEPGKATAA--AAVQKKAVMAPIAKAARTIAKDVKPPPFVFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKAAAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVETIDFPEDELTGV 1005
            GKV GII PPP+IRA+ DKTA++VA+NGKSFEQRIL+SEEG+S+KFNFM+P DPY AYYE++IR  EEG+ + PA   A              DG+A     K P   +AA    V K +V+ PIAKAA     +  PPP  F   HP GL   D+++IKLTAQYTAA GRQFLA LA++E +N +F+FLK  H LFSYF                   T+LVDAY KVLQPT+ Q+A  K G   Q +LERAVHRW +++ ++++++ Q+AE +A+++A++S+DW DFVVVETI F EDEL  V
Sbjct:   31 GKVTGIIYPPPDIRAVVDKTAQWVARNGKSFEQRILSSEEGKSSKFNFMKPGDPYNAYYEHRIRRFEEGKGEGPAEKKAKIAEASPPAAGETRDGKAVADTGKTPTAVSAAPTTTVSKASVLGPIAKAALH-KPEAPPPPQEFYISHPDGLNPLDVEIIKLTAQYTAASGRQFLAALAQREQRNPLFEFLKPSHILFSYF-------------------TTLVDAYIKVLQPTDAQRAMVKQGLETQKVLERAVHRWVHEKDDEQRKKHQQAEQEAERVAYQSVDWHDFVVVETITFAEDELLDV 315

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BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: W7TP71_9STRA (SWAP/Surp n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TP71_9STRA)

HSP 1 Score: 240 bits (613), Expect = 1.040e-68
Identity = 149/305 (48.85%), Postives = 187/305 (61.31%), Query Frame = 1

Query:  115 GKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGR-DTPAGAPAAPXXXXXXXXXXXADGEA-----KEPGKATAA--AAVQKKAVMAPIAKAARTIAKDVKPPPFVFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKAAAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVETIDFPEDELTGV 1005
            GKV GII PPP+IRA+ DKTA++VA+NGKSFEQRIL+SEEG+S+KFNFM+P DPY AYYE++IR+ EEG+ + PA   A              DG+A     + P   +AA    V K +V+ PIAKAA     +  PPP  F   HP GL   D+++IKLTAQYTAA GRQFLA LA++E +N +F+FLK  H LFSYF                   T+LVDAY KVLQPT+ Q+A  + G   Q +LERAVHR                     ++A++S+DW DFVVVETI F EDEL  V
Sbjct:   31 GKVTGIIYPPPDIRAVVDKTAQWVARNGKSFEQRILSSEEGKSSKFNFMKPGDPYNAYYEHRIRQFEEGKGEGPAEKKAKIAEVSPPAAGETRDGKAVADTGETPTAVSAAPTTTVSKASVLGPIAKAALH-KPEAPPPPQEFYISHPDGLNPLDVEIIKLTAQYTAASGRQFLAALAQREQRNPLFEFLKPSHILFSYF-------------------TTLVDAYIKVLQPTDSQRAMVRQGLETQKVLERAVHRXXXXXXXXXXXXXXXXXXXXXRVAYQSVDWHDFVVVETITFAEDELLDV 315

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BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: A0A7S3LZB0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZB0_9STRA)

HSP 1 Score: 226 bits (575), Expect = 3.360e-67
Identity = 149/302 (49.34%), Postives = 183/302 (60.60%), Query Frame = 1

Query:  106 ASQGKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGRDTPAGAPAAPXXXXXXXXXXXADGEAKEPGKATAAA----AVQKKAVMAPIAKAARTIAKDVKPP-PFVFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKAAAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVETIDFPEDEL 996
            A+QGK+ G+I+PPPEIRA+ DKTA FVAK GKSFEQR+L SEEG++AKFNFMRP DPY+AYYE KIRE E             XXXXXXXXXXX                      K +++ PIA+ A+T   +  P   F  ++ HP GLT  D+D IKL AQYTA  GR+FLA LA +E +N  F FLK  H LFSYF                   T LVD Y K+L P+   K    A  + Q  +E AV RW++ RAE E+RR + +E  A++LAF++IDW DF VVETIDFPE EL
Sbjct:    6 ATQGKITGVIIPPPEIRAVVDKTAAFVAKIGKSFEQRVLASEEGKTAKFNFMRPFDPYHAYYEMKIREGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVKASILNPIAQLAQTKPTEASPELEFSVANSHPAGLTPFDVDAIKLAAQYTAVNGREFLANLALREQRNPQFDFLKPTHMLFSYF-------------------TYLVDCYAKILHPSAALKDTIDAKGNYQTAMESAVRRWQWTRAEAERRRMENSEDSAERLAFQAIDWFDFTVVETIDFPEGEL 288

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BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: A0A8J2SH94_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SH94_9STRA)

HSP 1 Score: 219 bits (559), Expect = 1.020e-61
Identity = 140/311 (45.02%), Postives = 177/311 (56.91%), Query Frame = 1

Query:  103 AASQGKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGRDTPAGAPAAPXXXXXXXXXXXADGEAKEPGKA-----------TAAAAVQKKA-VMAPIAKAARTIAKDVKPP-PFVFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKAAAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVETIDFPEDEL 996
            A S G+V G+I PPP+IRAI DKTA FVA+NGK FE RI  S EG+S KF FMRP+DPY AYYE+KIREVEE                        DGE K   K             AA+ V K+A V AP+ +A + + ++  PP P       P+ +T  D ++IKLTAQYTAA GRQFLA LA++E +N  F FLK  H LFSYF                   T LVDAYT+ L P  + +A  K     +  L+R   RW++ R   EK R ++A  DAD+ +F+++DW DFVVVE IDFP+DEL
Sbjct:   21 APSSGEVTGVIRPPPDIRAIVDKTALFVARNGKQFEARIQASAEGQSQKFAFMRPNDPYNAYYEFKIREVEEN-----------------------DGELKVVEKPKVEAPVTTEVKAAASTVSKRATVAAPVQRALQGLGEETTPPVPLTAQLTTPSSVTPLDAEIIKLTAQYTAASGRQFLAGLAQREQRNPQFDFLKPTHVLFSYF-------------------TQLVDAYTRALAPPPELRAEVKRVEDPEHALKRCARRWDWSRRVDEKERREKALRDADRASFQAVDWHDFVVVEVIDFPKDEL 289

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BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: A0A7R9U8G3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8G3_9STRA)

HSP 1 Score: 207 bits (528), Expect = 4.030e-57
Identity = 141/317 (44.48%), Postives = 190/317 (59.94%), Query Frame = 1

Query:   91 ADVEAASQGKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGRDTPAGAPAAPXXXXXXXXXXXADGEAKEPGKATAAAAVQK-KAVMAPIAKAARTIAKDVKPPPFVFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKAAAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVETIDFPEDELTGV-TYGTMDEEQD 1035
            A+ E A+QGKV GII+PPP+IRA+ADKTA+FVAKNGK+FE+RIL S +G   KF+FMR +D YYAYYE+KIRE EEG             XXXXXXXXX                +++ K +++PI  A + + +D  PPP  F       L+  DLD+IKL AQ+TA GGRQFLA L  +E +N  F FL+    LF++F++                   LVDAY+K++   +  K   +       ++ERAV RW+++RA +  R+A+E    A+++AF SIDW DF +VETIDF +DEL      GT  EEQD
Sbjct:   33 AESEKATQGKVVGIIIPPPDIRAVADKTAQFVAKNGKTFEERILRSAQGH--KFDFMRKNDVYYAYYEHKIREFEEGTAEENERKRREAEXXXXXXXXXXXXXXXXXXXXXXXQTLERSKVIVSPIVTALKKVPEDEAPPPLDFILPEMAALSVADLDVIKLCAQFTALGGRQFLAELQSREERNAQFDFLRPTSMLFAFFSA-------------------LVDAYSKLVNQPDGVKKDLRRSLDSTRVIERAVWRWKHERASEAARQAKEEAEVAERMAFTSIDWHDFTIVETIDFGKDELLETPAEGTAQEEQD 328

[Close]

BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: D0N1H1_PHYIT (Splicing factor 3 subunit, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N1H1_PHYIT)

HSP 1 Score: 194 bits (494), Expect = 7.910e-53
Identity = 123/296 (41.55%), Postives = 171/296 (57.77%), Query Frame = 1

Query:  100 EAASQGKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGRDTPAGAPAAPXXXXXXXXXXXADGEAKEPGKATAAAAVQKKAVMAPIAKAARTI-AKDVKPPPF-VFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKAAAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVETIDF 981
            +AA QG+V GII PPP+IRA+ DKTA+FVA NG++FE RI+   E  SAKF+F+R  DPY+AYYE+K+ E    ++ P  AP                 E  +  +      V+KKAV    A+ A+ I  ++++PPP  +F   HPT L+A D +++ LTAQYTA  G  FL+ LA +E +N  F FLK  H LF+YF                   T+LV++YT VL   + Q    + G  R  +L+R VHR E+ R EQE+   + AE DA++ A   +DW DFV+VETI+F
Sbjct:    9 DAAVQGRVTGIIYPPPDIRAVVDKTAQFVANNGRAFESRIVG--ERVSAKFSFLRESDPYHAYYEHKVSEFTVKKEDPLPAPEPQQPEHTAEGQQETTQEIAKAVETVGDVVVEKKAVQDVTAQVAKNIRGRELEPPPEEIFIIKHPT-LSALDQEIMYLTAQYTALSGSSFLSGLATREQRNPQFDFLKPTHPLFAYF-------------------TALVESYTLVLAKQDAQMKRIEDGMERMKVLDRCVHRMEWQRTEQEREDKEAAEGDAERRALAQVDWHDFVIVETINF 282

[Close]

BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: A0A6A4YYN6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4YYN6_9STRA)

HSP 1 Score: 190 bits (483), Expect = 2.700e-52
Identity = 140/310 (45.16%), Postives = 188/310 (60.65%), Query Frame = 1

Query:  106 ASQGKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEE--GRDTPAGAPAAPXXXXXXXXXXXADGEA-KEPGKATAAAAVQKKAVMAPIAKAARTIAKDVKPPPFV--FSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKA---------AAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVETIDFPEDE 993
            A  G+V GII PPPEIRA+ DKTA+FVA+NG+SFE++I    E  SAKF+F++P+DPY+AYYE+K+ E E       PA +PAA XXXXXXXXXXXA      EP K      V+KK + A ++K+ + I KD   PP    F   HPT LT  D +++ LTAQYTA  G+ FL+ LA +E +N  F FLK  H LF+YF                   T LV++Y K+L    Q+           A +AG  R  +L+R VH+ E+ R E+E ++ +  E DA+KLA++ IDW DFVVVETI F +++
Sbjct:   10 AVHGRVTGIIYPPPEIRAVVDKTAQFVARNGRSFERKIAG--EVISAKFSFLKPNDPYHAYYEHKVEEFETQLNEPEPAKSPAAXXXXXXXXXXXXAPAALPSEPAKIEVGV-VEKKPIEAVVSKSLQKI-KDKNQPPAEEQFKQKHPT-LTPLDQEIMYLTAQYTAVSGKPFLSGLATREQRNPQFDFLKPTHPLFAYF-------------------TFLVESYAKILTAKAQENKKMSGNVLIEALEAGMDRMQVLDRCVHKHEWMRREEEDKQKEAMETDAEKLAYQQIDWHDFVVVETITFDDND 295

[Close]

BLAST of jgi.p|Trimin1|351974 vs. uniprot
Match: A0A1V9Z6W9_9STRA (Splicing factor 3 subunit n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z6W9_9STRA)

HSP 1 Score: 191 bits (486), Expect = 1.150e-51
Identity = 140/324 (43.21%), Postives = 195/324 (60.19%), Query Frame = 1

Query:   94 DVEAASQGKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGRDTPAGAPAAPXXXXXXXXXXXADGEAKEPGKATAAAAVQKKAVMAPIAKAARTIAKDVK---PPPFVFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKAAAKA-------GCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVETIDFPEDEL-TGVTYGTMDEEQ 1032
            +V  A  G+V GII PPP+IRA+ DKTA+FVAKNG++FE++I    E  SAKF+F++  DPY+AYYE+K+ E E+G + P   PA  XXXXXXXXXXX + + +        A V+KKA+ A + K+ R +++  K   PP   F   HPT LTA D +++ LTAQYTA GG+ FL+ LA +E +N  F F+  +H LF+YF                   T LV++Y K+L    Q    +         G  R  +L+R VH+ EY R E E ++ +EAE DA++LA+  IDW DFVVVETI F + +L T +    ++EEQ
Sbjct:    7 NVPIAGHGRVTGIIYPPPDIRAVVDKTAQFVAKNGRAFERKIAG--EVISAKFSFLKDSDPYHAYYEHKVDEFEKGLNEPE-KPAEXXXXXXXXXXXXXNVQVE--------AVVEKKAIEAAVGKSFRNLSESDKKKPPPEEQFKQKHPT-LTAQDQEIMYLTAQYTAVGGKAFLSGLATREQRNPQFDFINPVHPLFAYF-------------------TFLVESYAKILTAKAQYGKKSNPLIERLEDGFERMRVLDRCVHKLEYMRLEAEAKQKEEAENDAERLAYMQIDWHDFVVVETITFDDSDLATDIAPYYIEEEQ 299

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|351974 vs. uniprot
BLAST of jgi.p|Trimin1|351974 vs. uniprot

BLAST of jgi.p|Trimin1|351974 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZGC0_9STRA	4.030e-179	100.00	Smr domain-containing protein n=1 Tax=Tribonema mi...	[more]
A0A1S9DQP4_ASPOZ	9.780e-19	50.41	Smr domain-containing protein n=20 Tax=Aspergillus...	[more]
A0A1L9P5I6_ASPVE	1.120e-18	46.56	Smr domain-containing protein n=2 Tax=Aspergillus ...	[more]
UPI0015C2F52F	1.120e-18	47.15	SMR protein n=1 Tax=Geosmithia morbida TaxID=10943...	[more]
A0A8H7K8V2_BIOOC	1.810e-18	38.25	Smr domain-containing protein n=2 Tax=Bionectria o...	[more]
S7Z966_PENO1	2.610e-18	47.15	Smr domain-containing protein n=2 Tax=Penicillium ...	[more]
A0A1Q8RAV8_9PEZI	3.090e-18	44.12	Mitochondrial import inner membrane translocase su...	[more]
A0A084G2Q5_PSEDA	4.220e-18	45.24	Smr domain-containing protein n=1 Tax=Pseudallesch...	[more]
A0A1U8QYA9_EMENI	5.730e-18	46.56	Smr domain-containing protein n=3 Tax=Aspergillus ...	[more]
A0A059IYM6_TRIIM	7.340e-18	47.15	Smr domain-containing protein n=10 Tax=Arthroderma...	[more]

Pages

BLAST of jgi.p|Trimin1|351974 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836C863_9STRA	4.580e-221	100.00	Surp module-domain-containing protein n=1 Tax=Trib...	[more]
D7FWN9_ECTSI	4.050e-103	62.66	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A4D9CLT9_9STRA	1.330e-79	51.15	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
W7TP71_9STRA	1.040e-68	48.85	SWAP/Surp n=1 Tax=Nannochloropsis gaditana TaxID=7...	[more]
A0A7S3LZB0_9STRA	3.360e-67	49.34	Hypothetical protein (Fragment) n=2 Tax=Spumella e...	[more]
A0A8J2SH94_9STRA	1.020e-61	45.02	Hypothetical protein n=2 Tax=Pelagomonas calceolat...	[more]
A0A7R9U8G3_9STRA	4.030e-57	44.48	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
D0N1H1_PHYIT	7.910e-53	41.55	Splicing factor 3 subunit, putative n=2 Tax=Phytop...	[more]
A0A6A4YYN6_9STRA	2.700e-52	45.16	Uncharacterized protein (Fragment) n=1 Tax=Aphanom...	[more]
A0A1V9Z6W9_9STRA	1.150e-51	43.21	Splicing factor 3 subunit n=1 Tax=Thraustotheca cl...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_104	contig	Contig_104:421676..426201 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|351974\|estExt_Genemark1.C_Ctg_1040067
Description	2',3'-cyclic-nucleotide 3'-phosphodiesterase activity
COG category	O
Max annot lvl	2759\|Eukaryota
EggNOG OGs	KOG2401@1\|root,KOG2401@2759\|Eukaryota
Evalue	1.25e-32
Seed ortholog	2880.D8LQ36
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Domain of unknown function DUF1771
Ec32 ortholog	Ec-26_006280.1
TranscriptId	352296
Track	FilteredModels1
ProteinId	351974

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351974	gene_10231	Tribonema minus UTEX_B_3156	gene	Contig_104 421676..426201 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351974	Trimin1\|351974\|estExt_Genemark1.C_Ctg_1040067	Tribonema minus UTEX_B_3156	polypeptide	Contig_104 421689..426148 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_10231_1	exon_10231_1	Tribonema minus UTEX_B_3156	exon	Contig_104 421676..421943 +
exon_10231_2	exon_10231_2	Tribonema minus UTEX_B_3156	exon	Contig_104 422963..423064 +
exon_10231_3	exon_10231_3	Tribonema minus UTEX_B_3156	exon	Contig_104 423966..424016 +
exon_10231_4	exon_10231_4	Tribonema minus UTEX_B_3156	exon	Contig_104 424695..424931 +
exon_10231_5	exon_10231_5	Tribonema minus UTEX_B_3156	exon	Contig_104 425306..425350 +
exon_10231_6	exon_10231_6	Tribonema minus UTEX_B_3156	exon	Contig_104 425829..425882 +
exon_10231_7	exon_10231_7	Tribonema minus UTEX_B_3156	exon	Contig_104 426056..426201 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_10231	UTR5_10231	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_104 421676..421688 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_10231	CDS_10231	Tribonema minus UTEX_B_3156	CDS	Contig_104 421689..421943 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_10231	UTR3_10231	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_104 426149..426201 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_104:421676..426201+
coding sequence from alignment at Contig_104:421676..426201+

spliced messenger RNA

>mRNA_10231 ID=mRNA_10231|Name=jgi.p|Trimin1|351974|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=903bp|location=Sequence derived from alignment at Contig_104:421676..426201+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCGGAACGGAGCCATGGACGCTTTCATCAAGGGCCTGCGCTTCGTGGTCA
AGACCCTGCTGGAGTGCACATCGTCCACCAACGTCGCAGAGCCGCAGGAC
CAGCAGCAGCAACAGCAGAGTGGTAAAACTTATGATCCACAGCAGGATTA
CAAAGCGCCAGATTCAGAGGAGCAGGAGCAGTATAAGCCAGTGCGGCCAA
CTAGCACCGGCGATGTGGAGATCGGCAGGTTGACTCGCTACGACAGCAAC
ATATGTGACTTCAAGCAGTTTGACAGTCAAGGCAACCGCATTTTCCCGGA
GGCTGACGCGTGCCGGGAGGAGGCAGACAGGGAGGCCAAGCTGAGAGGGG
AGTGCTATGACCAGTCACAGGAGGCGTACAACGCCGGCGATGGCGCCAAG
GCCAAGGAGCTGTCAAATAAGGGCAAGGACCACGGCAGGCGCATGGAGGA
GGCGAACGCGCGCGCGGTGCGCGCCATCGTGGACCCGCAGCGCGCGGAGG
AGACGGGCTGCCTGGACCTGCACGGGCTGCGCGTGGCGGAGGCGGAGGCG
GTTACGCGTGATTTCCTGCTGGATCACAGGAACAGGGGGCAGTTTGAGGA
GCTGGAGGTGATCACGGGGGCGGGCAACCACAGCACCAACCACAAGGCCA
AGATCAAGCACGGGCGGGTAATCACAGCACCCAACCACAAGGCCAAGATC
AAGGAGTTGGAGGCGATCACGGGGAAGGGTAATGATGGCATCAACCAAAG
GGCCAAGCCCATGGTGGAGGACATGCTGCGCGATATGCAGTTCAACTTCC
ACAGCAAGAACGAGGGCGCTTACGTCATCACCCTCAGCAGCAGGCAGTAG
CTTCGTCGCACTATAACGGTGCAGCTGAAGACGAGTGCGCCGACATCAGC
AGC

protein sequence of jgi.p|Trimin1|351974

>Trimin1|351974|estExt_Genemark1.C_Ctg_1040067 ID=Trimin1|351974|estExt_Genemark1.C_Ctg_1040067|Name=jgi.p|Trimin1|351974|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=279bp
MDAFIKGLRFVVKTLLECTSSTNVAEPQDQQQQQQSGKTYDPQQDYKAPD
SEEQEQYKPVRPTSTGDVEIGRLTRYDSNICDFKQFDSQGNRIFPEADAC
REEADREAKLRGECYDQSQEAYNAGDGAKAKELSNKGKDHGRRMEEANAR
AVRAIVDPQRAEETGCLDLHGLRVAEAEAVTRDFLLDHRNRGQFEELEVI
TGAGNHSTNHKAKIKHGRVITAPNHKAKIKELEAITGKGNDGINQRAKPM
VEDMLRDMQFNFHSKNEGAYVITLSSRQ*

mRNA from alignment at Contig_104:421676..426201+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_10231 ID=mRNA_10231|Name=jgi.p|Trimin1|351974|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4526bp|location=Sequence derived from alignment at Contig_104:421676..426201+ (Tribonema minus UTEX_B_3156 )
GCGGAACGGAGCCATGGACGCTTTCATCAAGGGCCTGCGCTTCGTGGTCA
AGACCCTGCTGGAGTGCACATCGTCCACCAACGTCGCAGAGCCGCAGGAC
CAGCAGCAGCAACAGCAGAGTGGTAAAACTTATGATCCACAGCAGGATTA
CAAAGCGCCAGATTCAGAGGAGCAGGAGCAGTATAAGCCAGTGCGGCCAA
CTAGCACCGGCGATGTGGAGATCGGCAGGTTGACTCGCTACGACAGCAAC
ATATGTGACTTCAAGCAGGTGCGCTGCAGCAACGATCAAATTTCCAACCC
TACGGCATGACTTTGTATGCCGCTGCGTGAGCTGCAATACGATGTGCGAA
GCTGCTCACACCCGGCCTGGACTTATTTTTCACAATGATGGAGCCTTAGA
CAAGATAATAACTTCCATATATGCGGTTGTGAAGGAGAAACTCTGCAGGT
CATCTTGGCAGAAAGCAAAGGAGCAGCAGCAGCTGATGCCCTGTGAAACT
TGTGAAACTCGCAAGCATTCACGCAGGGTTATGTAACATATGTTATGCTC
CTGTGTCAATGCTGTATGGCTTTTGCTAGGCGCTCAGCACTCCACAGCCG
CATTGATTCAGGGCGAAGGAGCTAAGCTTGATGTTTACACACTTGGCTCA
GCTGTGTTGCGAGTTCAACTATTCGTCTGCAGAGTTGGTGTGCATGCCAC
GCACATGAAACCGTAGCTGCCACCCTGCCAATGTACACGGCTCGCACATT
TCACCATAGTTGCTTCCCACTAGATGTGAGTGCTGGCAACACAGTCTTCA
TCTTGCTTCTTCTCATTCATGAAGTCAGGCAGCCAATGACATGCAGCAGG
TGCCATTCACCGAGCGATGGTAAATGCCACTCAGCGCTGCAGGCAGCACA
TGTGCCGAAACTGTGCTTGCATGGCCAATTCCAGCGCCATTGACAATAAG
CACCAGCGCATGATCTGATTGAATAATAACAACCAGCGCATGATCTGTTG
CGCTCTGTCAGCCAGCAATGCAAACGCTGTCGGCCCGAATGGGATCTGTT
GCGCAATTTGCGATGTGCGCACATCTGCACGCACACGGTGCAAGCGTGCA
TATACCCTTCTTCGCACAGCTGCTGATACGGCAGCACTTGAATTGGCAGA
GTCGCGATTGTGCAGTGCGCACTGCGCTCTGCTGCCGCGTGATTGAAGTG
CCTTGAATAACTATCAGCGTCAAGGCAGCCACTGGTACTGAATGCCCGTG
CCCTCCGCTTGTGCCTGTTGCACGCCGTGTTTGACAGTTTGACAGTCAAG
GCAACCGCATTTTCCCGGAGGCTGACGCGTGCCGGGAGGAGGCAGACAGG
GAGGCCAAGCTGAGAGGGGAGTGCTATGACCAGTCACAGGTGCGTGACCG
CGCATGAACTAATCCTAACTCAAATCGTAAGTCAAACCCTCAGCTGCCTT
GACTAGTCGTAGGTGACCTAAGCCTAAACCTATCACTCAGTGAGGCCATG
ACTGTGATTCGTGAAGCCTGGACGCACATCAGTGGTGTTGGTGAGCGCGG
TGGTAATATGTGATTGCTGCACACATGCAGGCAGTCCGAGTCTGAGAGCA
CCACGACCATGCAATGTGGTTTATTGCATTTAAGCTCAGGGTACATGGAG
AGTTTCAATCACTGCACATGCATTTGCCCCTTTCCCTCTACACTTCATAT
GCTTAAATTCAAAACAGATGTGCCTAGCAACTGGCCACGCGTCAGAGCCT
CAGCCAGTCAATGCAGGGTTCCTCAATGCGCAGCCGACTGCGATGTCGAG
CGCATACTTAGTGCTCGGGGTTAGTGTTAGGCTTGGGGTTAGGATTAGGG
CAGGGGTTAGCATAGAGGCAGCCCTCAAGTGTGGTGGTGGGCCTTGCAAG
TTCGCCATCAACTGCTCACTGTGGTCAGAAGCAGGTGCTGATTCATTGAA
GATTGCAACACGAGCTCTGATGGGCCAGTGGTGGCGAGCTCTTGGCCGCC
TCTCATCACTCCTAACCCTCACGTAATCCTAGGTCGCGTGGCACATCACA
TGCACGCGCAGTAGTGGTATGGTTGCTGTGGTCCTCCATGTTGTGGTTCC
GCGAGCAGCTTACGCTTGTAAACGTTCAGCTCTCAGTAGCAGACCCTCAT
CAGGCTGCAGGCTCTCAGATCATGGCCCTAGGGAGGGCAAGCAACGGCGA
ACCGCGTTGACTTCTGAATATGATGTCTGGTTTGTTAGGTGTCACTGTGT
TAGGATTCATTGCCCTCTCTTATATGGTGCGCATGTGCAGGAGGCGTACA
ACGCCGGCGATGGCGCCAAGGCCAAGGAGCTGTCAAATAAGGTGAGCTCC
TCCCACCTCCTCCGCCCTCACCTCTCTGGACCTTTTCCCGTGCGCCTGAA
CCTCCTGTGTGGAGCATGCAACGGTACAAGAGTGCGCCTCCCCTGTTGGT
TGCAGCATCAAACATAAACTTCAACTGTTACTATTAGGGCGTGAGCGGTG
ACGCAACACTCTACCGGAAGTGTGAGGGCAGGCAACAGTTGAGGTAGGCA
TGGCCACTCCTTGGACAAACACAGGCCAGTTTTGCACTTGAAGTTACGCC
CGCCCTGCCCTAGCAAGCCGTGTTCATCTGCACAGTGGCTCCCTGCCTCC
CTGCGCTGTGCATCAAATCGCATCACACCACCATCGCAGTCGGTTGCGCC
CTCCCTTGAACCAATTGCGTGCCCTGCAAATATCAGCCACTAACGTTCTC
ACTGCGGCCAGTCACTCGAATCTTCACATCCGCCATGTCCATGCAACTCA
ATCTCAGTCATTTACACCTCCACTTCCACCAGCTGCCACGCATCCAGCAC
CCAATCATGATTACAAGAGCGCAGGGCAAGTACCACGCATGCACGTCGAG
GACAAGTACGCGCGCGTGCAGTTTGCGCCTGCACTGCACTGCCACCAAAC
TGTATGCAGGTCCAATCAACTGCATTCATTCATTCATCCACTCGTTCATT
CATTCACGCGCGAGCGCAGGGCAAGGACCACGGCAGGCGCATGGAGGAGG
CGAACGCGCGCGCGGTGCGCGCCATCGTGGACCCGCAGCGCGCGGAGGAG
ACGGGCTGCCTGGACCTGCACGGGCTGCGCGTGGCGGAGGCGGAGGCGGT
TACGCGTGATTTCCTGCTGGATCACAGGAACAGGGGGCAGTTTGAGGAGC
TGGAGGTGATCACGGGGGCGGGCAACCACAGCACCAACCACAAGGCCAAG
ATCAAGGTCAGTTGCCGTGTTCGTAAAGTTGAAGTTGGTGTGGGCAGAGG
AGTGGAGTGATTAGGTGTGGGTTTAGAGGATTGGAATGATTGGGGGTGGG
TGACCACAGCACCAACCACAAGGCCAAGATCAAGGTCAGTTGAGGTGTAG
GGGGGGGGTCATTCGCCATCTTACCACTCTTGAAATTGGTGTGGGGCCAA
GTTCAAGGCGGGTTGTCGTGTGGAGGCTGTCATTTGCGAAGTTGCCGATG
CTGTTGAAGTTGGTGTGGGCAGAGCTGGAGTGATATAGGGGCAGGTGACC
ACAGCACCAACCATAAGGCCAAGATCAAGGTGAGCTGTCGTGTTCGCAGT
TTCCGCTGCTGTTGACGTTTGTTTTGGCAGCACGGGCGGGTAATCACAGC
ACCCAACCACAAGGCCAAGATCAAGGTGAGTTTGGTTGTGGAAGTTGCCA
GTGTTGAAGATGGTGTTGGCAGGAGGTGGGAGGTGATCACGGGGAAGGGT
AATCATAACACTGACCACAAGGCCCGGATCGAAGTCAGTTGTAGTGTTCG
CGAAGTTGCCGCTGCTGTTGAAGTTTGTTTTGGCAGCACGGGCGGGTAAT
CACAGCACCCAACCACAAGGCCAAGATCAAGGTGAGTTTGGTTGTGGAAG
TTGCCAGTGTTGAAGATGGTGTTGGCAGGAGGTGGGAGGTGCTCACGGGG
AAGGGTAATCATAACACTGACCACAAGGCCCGGATCGAAGTCAGTTGTAG
TGTTCGCGAAGTTGCCGCTGCTGTTGAAGTTGGTGTTGGCAGCGTCCCGG
AGCGGGTAATCACGGCACTAACCACAGGGCCAAGATCAAGGTCGGTTGAG
TGTAGAGACCTGTTATTGCAAGCTGCCGATGCCATTGAGGTTGGTGTGGG
CAGGAGTTGGAGGCGATCACGGGGAAGGGTAATGATGGCATCAACCAAAG
GGCCAAGGTCAGTTGGTGTGTAGGGGATGTGATGACAGCGCAGGAAAAAA
ATGCAGGGGTTCTCTTGGCTGCTTTTATCACATGTACTTCGAAGTGCGTA
TACTTTGAAGCATGGTCAAGCCTGACGCACCGCTGCAATCCTTCAATCTC
CCCCCCCCCCCCTCGTTCTCCCCCTTGCAGCCCATGGTGGAGGACATGCT
GCGCGATATGCAGTTCAACTTCCACAGCAAGAACGAGGGCGCTTACGTCA
TCACCCTCAGCAGCAGGCAGTAGCTTCGTCGCACTATAACGGTGCAGCTG
AAGACGAGTGCGCCGACATCAGCAGC

Coding sequence (CDS) from alignment at Contig_104:421676..426201+

>mRNA_10231 ID=mRNA_10231|Name=jgi.p|Trimin1|351974|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=837bp|location=Sequence derived from alignment at Contig_104:421676..426201+ (Tribonema minus UTEX_B_3156 )
ATGGACGCTTTCATCAAGGGCCTGCGCTTCGTGGTCAAGACCCTGCTGGA
GTGCACATCGTCCACCAACGTCGCAGAGCCGCAGGACCAGCAGCAGCAAC
AGCAGAGTGGTAAAACTTATGATCCACAGCAGGATTACAAAGCGCCAGAT
TCAGAGGAGCAGGAGCAGTATAAGCCAGTGCGGCCAACTAGCACCGGCGA
TGTGGAGATCGGCAGGTTGACTCGCTACGACAGCAACATATGTGACTTCA
AGCAGTTTGACAGTCAAGGCAACCGCATTTTCCCGGAGGCTGACGCGTGC
CGGGAGGAGGCAGACAGGGAGGCCAAGCTGAGAGGGGAGTGCTATGACCA
GTCACAGGAGGCGTACAACGCCGGCGATGGCGCCAAGGCCAAGGAGCTGT
CAAATAAGGGCAAGGACCACGGCAGGCGCATGGAGGAGGCGAACGCGCGC
GCGGTGCGCGCCATCGTGGACCCGCAGCGCGCGGAGGAGACGGGCTGCCT
GGACCTGCACGGGCTGCGCGTGGCGGAGGCGGAGGCGGTTACGCGTGATT
TCCTGCTGGATCACAGGAACAGGGGGCAGTTTGAGGAGCTGGAGGTGATC
ACGGGGGCGGGCAACCACAGCACCAACCACAAGGCCAAGATCAAGCACGG
GCGGGTAATCACAGCACCCAACCACAAGGCCAAGATCAAGGAGTTGGAGG
CGATCACGGGGAAGGGTAATGATGGCATCAACCAAAGGGCCAAGCCCATG
GTGGAGGACATGCTGCGCGATATGCAGTTCAACTTCCACAGCAAGAACGA
GGGCGCTTACGTCATCACCCTCAGCAGCAGGCAGTAG