Trimin1|351952|estExt_Genemark1.C_Ctg_1040034 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351952
Unique NameTrimin1|351952|estExt_Genemark1.C_Ctg_1040034
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length264
Homology
BLAST of jgi.p|Trimin1|351952 vs. uniprot
Match: A0A836CMT5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMT5_9STRA)

HSP 1 Score: 530 bits (1366), Expect = 1.660e-190
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0
Query:    1 MRTTALTLLLTVGLLPALGFSAFWQPRVKGLRATRRQRHHEGYDLRPNSAIQSADPNLCIFNKIALLSGGGAASVDTPMNSKAVKIGWASSWGVLSVLAIFANAARRLGPVAIEPLQMSDKGGLTTVQWVCYAGCTALIGYMKGERAIRRKFSRHVVQRALTLDQGEATPLRVLLAGPYSMGLFRANRRRKASSWGMLVAAVGIIKVIKKMPYPWRSIVDAGVLAGLCWGGGAVAYYWVRSWSGINPGVDPQMPKRSEAAATE 263
            MRTTALTLLLTVGLLPALGFSAFWQPRVKGLRATRRQRHHEGYDLRPNSAIQSADPNLCIFNKIALLSGGGAASVDTPMNSKAVKIGWASSWGVLSVLAIFANAARRLGPVAIEPLQMSDKGGLTTVQWVCYAGCTALIGYMKGERAIRRKFSRHVVQRALTLDQGEATPLRVLLAGPYSMGLFRANRRRKASSWGMLVAAVGIIKVIKKMPYPWRSIVDAGVLAGLCWGGGAVAYYWVRSWSGINPGVDPQMPKRSEAAATE
Sbjct:    1 MRTTALTLLLTVGLLPALGFSAFWQPRVKGLRATRRQRHHEGYDLRPNSAIQSADPNLCIFNKIALLSGGGAASVDTPMNSKAVKIGWASSWGVLSVLAIFANAARRLGPVAIEPLQMSDKGGLTTVQWVCYAGCTALIGYMKGERAIRRKFSRHVVQRALTLDQGEATPLRVLLAGPYSMGLFRANRRRKASSWGMLVAAVGIIKVIKKMPYPWRSIVDAGVLAGLCWGGGAVAYYWVRSWSGINPGVDPQMPKRSEAAATE 263          
BLAST of jgi.p|Trimin1|351952 vs. uniprot
Match: A0A836CIU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIU2_9STRA)

HSP 1 Score: 211 bits (536), Expect = 2.920e-64
Identity = 107/201 (53.23%), Postives = 140/201 (69.65%), Query Frame = 0
Query:   65 ALLSGGGAASVDTPMNSKAVK--IGWASSWGVLSVLAIFANAARRLGPVAIEPLQMSDKGGLTTVQWVCYAGCTALIGYMKGERAIRRKFSRHVVQRALTLDQGEATPLRVLLAGPYSMGLFRANRRRKASSWGMLVAAVGIIKVIKKMPYPWRSIVDAGVLAGLCWGGGAVAYYWVRSWSGINPGVDPQMPKRSEAAATE 263
            AL   GGAA+ D  + S + +   G AS+WGVLSVLAI  NA +RL P+A++P +  D   LT   W  Y G   L+ Y +G +A ++KFS  VVQRALTLD+  A PLR++LAGPYSMGLF A+R+RK  SW +  A +G+++ ++K+PYPWRSI+D GV+AGL WG GA+ YYWVRSW G +PGVD Q+P   E A TE
Sbjct:   73 ALRMSGGAAADDNTVASTSGRSSFGLASAWGVLSVLAILGNAVKRLAPIAMQPFKSGD---LTRAHWGMYVGFAVLMAYAEGYKAFQKKFSPMVVQRALTLDKS-AGPLRLVLAGPYSMGLFHASRKRKIVSWTLSFAVLGLVQAVRKLPYPWRSIIDGGVVAGLSWGSGAIVYYWVRSWFGTDPGVDAQLPLE-EPAKTE 268          
BLAST of jgi.p|Trimin1|351952 vs. uniprot
Match: A0A835ZF77_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF77_9STRA)

HSP 1 Score: 202 bits (514), Expect = 1.770e-61
Identity = 103/207 (49.76%), Postives = 137/207 (66.18%), Query Frame = 0
Query:   61 FNKIALLSGGGAA---SVDTPMNSKAVK--IGWASSWGVLSVLAIFANAARRLGPVAIEPLQMSDKGGLTTVQWVCYAGCTALIGYMKGERAIRRKFSRHVVQRALTLDQGEAT--PLRVLLAGPYSMGLFRANRRRKASSWGMLVAAVGIIKVIKKMPYPWRSIVDAGVLAGLCWGGGAVAYYWVRSWSGINPGVDPQMPKRSEAA 260
            F     LSGGG     SV  P  S   +   G+AS+WGVLSVL+I A A RRL P+A++P +  D   L+   W  Y    AL+ Y++G +A ++KFS  VVQRALTLDQ   +  PLR++LAGPY MGLF A R+RK  SW + ++ + ++ V++++PYPWRSI+DAGV+AGL WG  A+ Y+WVRSW G  PGVD QMP+  E A
Sbjct:   17 FTAALRLSGGGIGRGKSVAPPPPSAPARSSFGFASAWGVLSVLSILAGALRRLVPIALQPFKAGD---LSYGHWALYMSFVALMAYVEGHKAFQKKFSPMVVQRALTLDQARTSFGPLRIILAGPYCMGLFYATRKRKIVSWTLYISVIALVTVVRQLPYPWRSIIDAGVVAGLSWGASAILYFWVRSWFGRAPGVDAQMPESKEEA 220          
BLAST of jgi.p|Trimin1|351952 vs. uniprot
Match: A0A8J6CDI7_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDI7_DIALT)

HSP 1 Score: 156 bits (395), Expect = 1.070e-43
Identity = 88/195 (45.13%), Postives = 119/195 (61.03%), Query Frame = 0
Query:   64 IALLSGGGAASVDTPMNSKAVKIGWASSWGVLSVLAIFANAARRLGPVAIEPLQMSDKGGLTTVQWVCYAGCTALIGYMKGERAIRRKFSRHVVQRALTLDQ--GEATPLRVLLAGPYSMGLFRANRRRKASSWGMLVAAVGIIKVIKKMPYPWRSIVDAGVLAGLCWGGGAVAYYWVRSWSGINPGVDPQMPKR 256
            +A     GA++V  PM   A     AS WGV+ V+AI ANA  RL P+A EP +    GGL  + W  YA   A   Y++G +A + KFS  VV RA TL    G AT LR +LA  YSMGLF A R+RK  SW + +A + I+ V+K++PYPWRSIVDAGV+AGL WG  ++ + +V++  G  P V  ++P +
Sbjct:   34 VARARARGASTV--PMRPSA-----ASHWGVVGVMAILANAIGRLAPIAAEPFRY---GGLAPLHWASYAATIAAFAYVEGYKAFQLKFSPLVVSRAFTLGPQGGRATALRSVLAPFYSMGLFHATRKRKVISWTISLAVIVIVGVVKRLPYPWRSIVDAGVVAGLTWGVTSIGWIYVKAIGGSLPNVSTELPPK 218          
BLAST of jgi.p|Trimin1|351952 vs. uniprot
Match: A0A7S3SW48_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SW48_EMIHU)

HSP 1 Score: 154 bits (390), Expect = 1.190e-42
Identity = 83/208 (39.90%), Postives = 123/208 (59.13%), Query Frame = 0
Query:   53 SADPNLCIFNKIALLSGGGAASVDTPMNSKAVKIGWASSWGVLSVLAIFANAARRLGPVAIEPLQMSDKGGLTTVQWVCYAGCTALIGYMKGERAIRRKFSRHVVQRALTLDQGEATP--LRVLLAGPYSMGLFRANRRRKASSWGMLVAAVGIIKVIKKMPYPWRSIVDAGVLAGLCWGGGAVAYYWVRSWSGINPGVDPQMPKRSE 258
            SA P +    +  L++   +AS   P+ +     G  ++WGV   L I A A  RL P+A++P+   D   +T +QW  Y G  A   Y +G +A + KFS  VVQRA+TL      P  L  +LA  YSMGLF A+++RK  SW + +    II ++K++PYPWRS+VDAGV  GL WGG ++   ++R+ +G +PGVDP++PK  +
Sbjct:   41 SARPAIGRAARADLIAASASAS---PVPTADAARGLRTAWGVCGFLGILAQAIGRLAPIAMQPILQRD---ITMLQWGLYGGTMAFFAYTEGYKAFQCKFSPLVVQRAMTLSTRSPPPPLLHSVLAPFYSMGLFHASKKRKTVSWSISLGVACIIGLVKRLPYPWRSVVDAGVCTGLLWGGTSIGVIYLRALAGKSPGVDPELPKEDK 242          
BLAST of jgi.p|Trimin1|351952 vs. uniprot
Match: A0A0M0JX49_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JX49_9EUKA)

HSP 1 Score: 148 bits (374), Expect = 1.620e-40
Identity = 74/185 (40.00%), Postives = 112/185 (60.54%), Query Frame = 0
Query:   73 ASVDTPMNSKAVKIGWASSWGVLSVLAIFANAARRLGPVAIEPLQMSDKGGLTTVQWVCYAGCTALIGYMKGERAIRRKFSRHVVQRALTLDQGEATPLRVLLAGPYSMGLFRANRRRKASSWGMLVAAVGIIKVIKKMPYPWRSIVDAGVLAGLCWGGGAVAYYWVRSWSGINPGVDPQMPKRS 257
            AS   P N+  + +    +WGV   L I A+A +RL P+A++P    D   L+ +QW  Y G   +  Y++G  A ++KFS  VV+RA+TL Q   +P+ + LA  YSMGL  A ++RK  SW + ++   ++ ++K++PYPWRSIVDAGV  GL WG  ++   + R+ +G  PGVDP +P  S
Sbjct:   45 ASPAAPRNAHGIAV----AWGVCGFLGILASAIKRLAPIAMQPFLQRD---LSWLQWGFYGGSMGIFAYVEGYGAFQKKFSPLVVERAMTLKQS-TSPVHIALAPFYSMGLMHATKKRKIVSWSVSMSVAMVVGIVKRLPYPWRSIVDAGVCTGLAWGAVSIVIIYARALAGTPPGVDPCLPSSS 221          
BLAST of jgi.p|Trimin1|351952 vs. uniprot
Match: A0A7S2WJT5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJT5_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.060e-39
Identity = 82/197 (41.62%), Postives = 117/197 (59.39%), Query Frame = 0
Query:   63 KIALLSGGGAASVDTPMNSKAVKIGWASSWGVLSVLAIFANAARRLGPVAIEPLQMSDKGGLTTVQWVCYAGCTALIGYMKGERAIRRKFSRHVVQRALTLDQ----GEATPLRVLLAGPYSMGLFRANRRRKASSWGMLVAAVGIIKVIKKMPYPWRSIVDAGVLAGLCWGGGAVAYYWVRS-WSGINPGVDPQMP 254
            K+A +SGGG  S D       +    AS+WG L V+ I AN  +RL PVA++P   +  G L+ + WV YA     +GY +G +A + KF   VV RA TL++    G    LR  LA  YSMGLF A+++R   SW  ++    I+  +K++PYPWRSI+D GV+ GL WG  ++AY ++R  ++G  P VDPQ+P
Sbjct:  104 KMAAISGGGKLSKDEQSPLGFI----ASTWGALGVMYILANPIKRLLPVALQPF--ASPGDLSAMHWVAYALWCVFMGYTEGYKAFQLKFCPLVVSRAATLERQDCRGPGWWLRAALAPLYSMGLFHASKKRLIVSWSFVIGISAIVATVKRLPYPWRSIIDGGVVFGLSWGAASIAYLYLRKIFTGQIPEVDPQLP 294          
BLAST of jgi.p|Trimin1|351952 vs. uniprot
Match: W7TVP9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVP9_9STRA)

HSP 1 Score: 147 bits (370), Expect = 3.920e-39
Identity = 78/199 (39.20%), Postives = 125/199 (62.81%), Query Frame = 0
Query:   63 KIALLSGGGAASVDTPMNSKAVKIGWASSWGVLSVLAIFANAARRLGPVAIEPLQMS-DKGGLTTVQWVCYAGCTALIGYMKGERAIRRKFSRHVVQRALTLDQGEATPL-RVLLAGPYSMGLFRANRRRKASSWGMLVAAVGIIKVIKKMPYPWRSIVDAGVLAGLCWGGGAVAYYWVRSWSGINPGVDPQMPKRSEA 259
            K+A ++GG A +V+T   S+      ++ WGV+ V+A+ +NA RRL P+A+EP + +      T + W  Y G   ++ Y +G +  + KFS  VV+RALTL  G  +PL   +LA PYSMGLF A+++R+  SW + +  +G++K +K + +P+RSIVDAGV+AGL WG  ++A  + ++  G  P +DP +P   +A
Sbjct:   96 KLAKITGGAAPAVET---SQKQSFSLSALWGVVGVVAMLSNAIRRLLPIALEPFKKTATPTAFTPLHWAQYVGFALIMAYAEGYKGFQLKFSPLVVKRALTL--GPRSPLLHKVLAAPYSMGLFHASKKRQIVSWTIALGVIGLVKAVKTLAFPYRSIVDAGVVAGLSWGALSIAGIYAQALRGHVPSIDPALPDVKKA 289          
BLAST of jgi.p|Trimin1|351952 vs. uniprot
Match: D8LTY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTY0_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 5.180e-38
Identity = 86/246 (34.96%), Postives = 130/246 (52.85%), Query Frame = 0
Query:   32 RATRRQRHHEGYDLRPNSAIQSA----DPNLCIFNKIALLSGGGAASVDTPMNSKAVKIGWASSWGVLSVLAIFANAARRLGPVAIEPLQMSDKGGLTTVQWVCYAGCTALIGYMKGERAIRRKFSRHVVQRALTLDQGEAT---------------PLRVLLAGPYSMGLFRANRRRKASSWGMLVAAVGIIKVIKKMPYPWRSIVDAGVLAGLCWGGGAVAYYWVRSWSGINPGVDPQMPKRSE 258
            R T+RQ+ ++    RP+++  +A       L +  K   ++GGGA +        A   G AS+WGV+SV+ I  NA +RL P+A++P   +  G                          ++KFS  VV+RALTLDQ  A                PLR+LLAGPYSMGLF A ++RK  SW +    + +++++K++PYPWRSIVDAGV+ GL +G  ++   W R+  G  P +DP +P+  +
Sbjct:   92 RETQRQQKNDDLLQRPHASPVAAAVAPKNTLPLMGKALFVTGGGAGAGAAGKGEPA-GFGVASAWGVVSVVFILMNAVKRLAPIAMQPFSRASLG-------------------------FQKKFSPLVVKRALTLDQAAAAVPAADGGQKRRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAILGKAPSIDPALPEEKK 311          
BLAST of jgi.p|Trimin1|351952 vs. uniprot
Match: A0A8J2SZF0_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZF0_9STRA)

HSP 1 Score: 140 bits (353), Expect = 2.100e-37
Identity = 72/169 (42.60%), Postives = 103/169 (60.95%), Query Frame = 0
Query:   86 IGWASSWGVLSVLAIFANAARRLGPVAIEPLQMSDKGGLTTVQWVCYAGCTALIGYMKGERAIRRKFSRHVVQRALTLDQGEATPLRVLLAGPYSMGLFRANRRRKASSWGMLVAAVGIIKVIKKMPYPWRSIVDAGVLAGLCWGGGAVAYYWVRSWSGINPGVDPQMP 254
            +G A +WG L + AI  NA RR+ PVA+EP   S    L    W  YA     + Y++G +A  RKFS  VV RALTL   +A    V LA  Y+MGLF A+++R A+SWG +V    ++K++K + YPWR++VD GV+AGL  G  ++ Y++ RS  G++P  D  +P
Sbjct:   54 LGIAPAWGALGMTAILGNAIRRVLPVALEPFS-SGAAALAPPTWAAYAAFVVFMTYVEGYKAFHRKFSPMVVARALTLR--DAPLHHVALAPLYAMGLFHASKKRLATSWGFVVGIAALVKLVKTLDYPWRAVVDGGVVAGLSVGAASILYHYGRSLGGVDPPADAALP 219          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351952 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CMT5_9STRA1.660e-190100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CIU2_9STRA2.920e-6453.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZF77_9STRA1.770e-6149.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J6CDI7_DIALT1.070e-4345.13Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S3SW48_EMIHU1.190e-4239.90Hypothetical protein n=2 Tax=Emiliania huxleyi Tax... [more]
A0A0M0JX49_9EUKA1.620e-4040.00Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
A0A7S2WJT5_9STRA1.060e-3941.62Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7TVP9_9STRA3.920e-3939.20Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
D8LTY0_ECTSI5.180e-3834.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8J2SZF0_9STRA2.100e-3742.60Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_104contigContig_104:201305..205285 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351952mRNA_10195Tribonema minus UTEX_B_3156 mRNAContig_104 201291..205610 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351952|estExt_Genemark1.C_Ctg_1040034 ID=Trimin1|351952|estExt_Genemark1.C_Ctg_1040034|Name=jgi.p|Trimin1|351952|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=264bp
MRTTALTLLLTVGLLPALGFSAFWQPRVKGLRATRRQRHHEGYDLRPNSA
IQSADPNLCIFNKIALLSGGGAASVDTPMNSKAVKIGWASSWGVLSVLAI
FANAARRLGPVAIEPLQMSDKGGLTTVQWVCYAGCTALIGYMKGERAIRR
KFSRHVVQRALTLDQGEATPLRVLLAGPYSMGLFRANRRRKASSWGMLVA
AVGIIKVIKKMPYPWRSIVDAGVLAGLCWGGGAVAYYWVRSWSGINPGVD
PQMPKRSEAAATE*
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