Trimin1|351713|estExt_Genemark1.C_Ctg_980034 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351713
Unique NameTrimin1|351713|estExt_Genemark1.C_Ctg_980034
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length115
Homology
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BLAST of jgi.p|Trimin1|351713 vs. uniprot
Match: A0A836C7K0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7K0_9STRA)

HSP 1 Score: 168 bits (426), Expect = 4.370e-52
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 
Query:    1 MARVMFFALVALLVAAASAFVMPAAPRSLPTRQVASSGVADALASDIDYESQIKTMELEATERIKKAFDTAIVXXXXXXXXXXXXXXXXSDAEAKERWAKLEGEMKAAAASVGL 114
            MARVMFFALVALLVAAASAFVMPAAPRSLPTRQVASSGVADALASDIDYESQIKTMELEATERIKKAFDTAIVXXXXXXXXXXXXXXXXSDAEAKERWAKLEGEMKAAAASVGL
Sbjct:    1 MARVMFFALVALLVAAASAFVMPAAPRSLPTRQVASSGVADALASDIDYESQIKTMELEATERIKKAFDTAIVXXXXXXXXXXXXXXXXSDAEAKERWAKLEGEMKAAAASVGL 114
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BLAST of jgi.p|Trimin1|351713 vs. uniprot
Match: A0A835YUP5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUP5_9STRA)

HSP 1 Score: 102 bits (255), Expect = 2.880e-26
Identity = 65/104 (62.50%), Postives = 73/104 (70.19%), Query Frame = 0 
Query:   12 LLVAAASAFVMPAAPR-SLPTRQVASSGVADALASDIDYESQIKTMELEATERIKKAFDTAIVXXXXXXXXXXXXXXXXSDAEAKERWAKLEGEMKAAAASVGL 114
            LL A ASAF+MPAAPR    T QVAS+ VADA+++DIDYESQIK ME+EA ERIKKAFD A V                SDAEAKERWA LE +M+ AAASVGL
Sbjct:   10 LLAAGASAFIMPAAPRVPAVTCQVASAAVADAVSTDIDYESQIKKMEMEAKERIKKAFDEATVK---------------SDAEAKERWAALEEDMRKAAASVGL 98
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351713 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836C7K0_9STRA4.370e-52100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YUP5_9STRA2.880e-2662.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_98contigContig_98:313468..316012 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351713mRNA_14911Tribonema minus UTEX_B_3156 mRNAContig_98 312804..316239 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351713|estExt_Genemark1.C_Ctg_980034 ID=Trimin1|351713|estExt_Genemark1.C_Ctg_980034|Name=jgi.p|Trimin1|351713|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=115bp
MARVMFFALVALLVAAASAFVMPAAPRSLPTRQVASSGVADALASDIDYE
SQIKTMELEATERIKKAFDTAIVEAKERIKKAFDEATVKSDAEAKERWAK
LEGEMKAAAASVGL*
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