Trimin1|351704|estExt_Genemark1.C_Ctg_980020 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351704
Unique NameTrimin1|351704|estExt_Genemark1.C_Ctg_980020
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length415
Homology
BLAST of jgi.p|Trimin1|351704 vs. uniprot
Match: A0A835YGX0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGX0_9STRA)

HSP 1 Score: 837 bits (2161), Expect = 1.380e-306
Identity = 414/414 (100.00%), Postives = 414/414 (100.00%), Query Frame = 0
Query:    1 MLIDLDPAVDLPSATDSVPAAAAAAEPVTAAGAPTPSAPTSSDLCAAVLGLPLAAICADDGAACGCSVSESGGDHQAATLASGSDSHSGASRPGGSSRYCVLLSGGLRSFAASSFSLRAFILDVNAPIDVFVYGSYDAGVPQDEENLELLRGVATAFVLEPFRFIPTRMIWQWSAIRNALEMATAYADARGRPYDAIVRARPDTVYLTPLHLDTLLSRDREVELHRPYFRAHAWKSNAELNASADIPRPVLSTAPAFFPSFFVATPEVMQLMIAHDFYQRFWRVRNDHLNSMLELKPLGLHADYWFAPGDGFESLLSEWLVWNQVPIAEIPHVGPSAFVWGTLRPQCIGDYCDGTWMSCGQWTDVECVIEHGLREGEPDNRRYNMTEIVRGVPEARQYCAAWQEGEYPPVNRVR 414
            MLIDLDPAVDLPSATDSVPAAAAAAEPVTAAGAPTPSAPTSSDLCAAVLGLPLAAICADDGAACGCSVSESGGDHQAATLASGSDSHSGASRPGGSSRYCVLLSGGLRSFAASSFSLRAFILDVNAPIDVFVYGSYDAGVPQDEENLELLRGVATAFVLEPFRFIPTRMIWQWSAIRNALEMATAYADARGRPYDAIVRARPDTVYLTPLHLDTLLSRDREVELHRPYFRAHAWKSNAELNASADIPRPVLSTAPAFFPSFFVATPEVMQLMIAHDFYQRFWRVRNDHLNSMLELKPLGLHADYWFAPGDGFESLLSEWLVWNQVPIAEIPHVGPSAFVWGTLRPQCIGDYCDGTWMSCGQWTDVECVIEHGLREGEPDNRRYNMTEIVRGVPEARQYCAAWQEGEYPPVNRVR
Sbjct:    1 MLIDLDPAVDLPSATDSVPAAAAAAEPVTAAGAPTPSAPTSSDLCAAVLGLPLAAICADDGAACGCSVSESGGDHQAATLASGSDSHSGASRPGGSSRYCVLLSGGLRSFAASSFSLRAFILDVNAPIDVFVYGSYDAGVPQDEENLELLRGVATAFVLEPFRFIPTRMIWQWSAIRNALEMATAYADARGRPYDAIVRARPDTVYLTPLHLDTLLSRDREVELHRPYFRAHAWKSNAELNASADIPRPVLSTAPAFFPSFFVATPEVMQLMIAHDFYQRFWRVRNDHLNSMLELKPLGLHADYWFAPGDGFESLLSEWLVWNQVPIAEIPHVGPSAFVWGTLRPQCIGDYCDGTWMSCGQWTDVECVIEHGLREGEPDNRRYNMTEIVRGVPEARQYCAAWQEGEYPPVNRVR 414          
BLAST of jgi.p|Trimin1|351704 vs. uniprot
Match: A0A835Z0K3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0K3_9STRA)

HSP 1 Score: 224 bits (570), Expect = 1.150e-67
Identity = 113/162 (69.75%), Postives = 138/162 (85.19%), Query Frame = 0
Query:  103 LSGGLRSFAASSFSLRAFILDVNAPIDVFVYGSYDAGVPQDEENLELLRGVATAFVLEPFRFIPTRMIWQWSAIRNALEMATAYADARGRPYDAIVRARPDTVYLTPLHLDTLLSRDREVELHRPYFRAHAWKSNAELNASADIPRPVLSTA----PAFFPS 260
            LS  LRSFAA+SFSLR F+L+VNAP+DVFVYG+Y AGVPQDEEN+ELLRG+ATAFVLEPF  IP RM+WQW +IRN+L+MATAYADARG PY A+VR+RPDTVYLTPLHLD LLS+  ++ L+RPYF A  +KS+AELN +A++ +PVL+ +    PAFFPS
Sbjct:   71 LSARLRSFAATSFSLRRFVLEVNAPMDVFVYGTYIAGVPQDEENVELLRGLATAFVLEPFVEIP-RMMWQWQSIRNSLDMATAYADARGSPYAAVVRSRPDTVYLTPLHLDALLSKYLDLGLYRPYFAAQGFKSDAELNLTAEVSQPVLAVSKVALPAFFPS 231          
BLAST of jgi.p|Trimin1|351704 vs. uniprot
Match: A0A835YXM7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXM7_9STRA)

HSP 1 Score: 202 bits (514), Expect = 2.240e-60
Identity = 85/149 (57.05%), Postives = 112/149 (75.17%), Query Frame = 0
Query:  262 FVATPEVMQLMIAHDFYQRFWRVRNDHLNSMLELKPLGLHADYWFAPGDGFESLLSEWLVWNQVPIAEIPHVGPSAFVWGTLRPQCIGDYCDGTWMSCGQWTDVECVIEHGLREGEPDNRRYNMTEIVRGVPEARQYCAAWQEGEYPPV 410
            F+ATP VM+L+++ DF +RFWR+RN++  +ML   PL L  +Y F  G+GFE +L EWL+WNQVPIAE+PHVGP +FVWGTLRP+ IG+YC+GTWM   +WTD  C+I+H L    P   +YN+TE+V  VPEA QYC  WQ+G YPP+
Sbjct:   14 FIATPAVMRLLLSPDFSERFWRMRNEYKPNMLAANPLALDRNYTFELGNGFEMVLREWLIWNQVPIAELPHVGPLSFVWGTLRPEHIGNYCNGTWMRTARWTDAHCMIKHSLGSRVPGTVQYNITEVVTEVPEAVQYCNDWQQGAYPPL 162          
BLAST of jgi.p|Trimin1|351704 vs. uniprot
Match: A0A835ZQA6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQA6_9STRA)

HSP 1 Score: 195 bits (495), Expect = 7.140e-55
Identity = 88/95 (92.63%), Postives = 90/95 (94.74%), Query Frame = 0
Query:  261 FFVATPEVMQLMIAHDFYQRFWRVRNDHLNSMLELKPLGLHADYWFAPGDGFESLLSEWLVWNQVPIAEIPHVGPSAFVWGTLRPQCIGDYCDGT 355
            FFVATPEVMQLM+AHDFYQRFWRVRNDHLN MLEL PLGLHADY F PGDGFESLLSEWLVWNQVPIAEIPHVGPSAFVWGTLRPQCIGDYC+ T
Sbjct:   32 FFVATPEVMQLMMAHDFYQRFWRVRNDHLNDMLELNPLGLHADYRFGPGDGFESLLSEWLVWNQVPIAEIPHVGPSAFVWGTLRPQCIGDYCEVT 126          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351704 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835YGX0_9STRA1.380e-306100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z0K3_9STRA1.150e-6769.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YXM7_9STRA2.240e-6057.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZQA6_9STRA7.140e-5592.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_98contigContig_98:193881..197106 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351704mRNA_14899Tribonema minus UTEX_B_3156 mRNAContig_98 193696..197106 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351704|estExt_Genemark1.C_Ctg_980020 ID=Trimin1|351704|estExt_Genemark1.C_Ctg_980020|Name=jgi.p|Trimin1|351704|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=415bp
MLIDLDPAVDLPSATDSVPAAAAAAEPVTAAGAPTPSAPTSSDLCAAVLG
LPLAAICADDGAACGCSVSESGGDHQAATLASGSDSHSGASRPGGSSRYC
VLLSGGLRSFAASSFSLRAFILDVNAPIDVFVYGSYDAGVPQDEENLELL
RGVATAFVLEPFRFIPTRMIWQWSAIRNALEMATAYADARGRPYDAIVRA
RPDTVYLTPLHLDTLLSRDREVELHRPYFRAHAWKSNAELNASADIPRPV
LSTAPAFFPSFFVATPEVMQLMIAHDFYQRFWRVRNDHLNSMLELKPLGL
HADYWFAPGDGFESLLSEWLVWNQVPIAEIPHVGPSAFVWGTLRPQCIGD
YCDGTWMSCGQWTDVECVIEHGLREGEPDNRRYNMTEIVRGVPEARQYCA
AWQEGEYPPVNRVR*
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