Trimin1|351669|estExt_Genemark1.C_Ctg_960045 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351669
Unique NameTrimin1|351669|estExt_Genemark1.C_Ctg_960045
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length219
Homology
BLAST of jgi.p|Trimin1|351669 vs. uniprot
Match: A0A835YGP9_9STRA (Utp12 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGP9_9STRA)

HSP 1 Score: 330 bits (846), Expect = 9.440e-113
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0
Query:    1 MAFDNARNPDDASGGITKGLPSAAEKLRAVLKQLLQALHAKDEDLLQRCLSVTDPEIVDGVINRLPRKRVQPLYRLLVEQFEATPARGTSYSVWVHSMLSHHMSHIGGIQGMESAPKSKPPRSGLIELLQKAVDQRLPRLEKLLAVTGRLDLVLSHVPATPAANAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESEASEAGSDAE 218
            MAFDNARNPDDASGGITKGLPSAAEKLRAVLKQLLQALHAKDEDLLQRCLSVTDPEIVDGVINRLPRKRVQPLYRLLVEQFEATPARGTSYSVWVHSMLSHHMSHIGGIQGMESAPKSKPPRSGLIELLQKAVDQRLPRLEKLLAVTGRLDLVLSHVPATPAANAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESEASEAGSDAE
Sbjct:    1 MAFDNARNPDDASGGITKGLPSAAEKLRAVLKQLLQALHAKDEDLLQRCLSVTDPEIVDGVINRLPRKRVQPLYRLLVEQFEATPARGTSYSVWVHSMLSHHMSHIGGIQGMESAPKSKPPRSGLIELLQKAVDQRLPRLEKLLAVTGRLDLVLSHVPATPAANAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESEASEAGSDAE 218          
BLAST of jgi.p|Trimin1|351669 vs. uniprot
Match: A0A8H7PZ10_9FUNG (Utp12 domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PZ10_9FUNG)

HSP 1 Score: 82.4 bits (202), Expect = 1.340e-14
Identity = 47/145 (32.41%), Postives = 78/145 (53.79%), Query Frame = 0
Query:   15 GITKGLPS--AAEKLRAVLKQLLQALHAKDEDLLQRCLSVTDPEIVDGVINRLPRKRVQPLYRLLVEQFEATPARGTSYSVWVHSMLSHHMSHIGGIQGMESAPKSKPPRSGLIELLQKAVDQRLPRLEKLLAVTGRLDLVLSHV 157
            G   G P+  A     ++ + L+QALH+ D  LL+ CL+ ++PEI+   + RLP   V P  + +V++F+  P RG +   W+ ++L  H +++  +          P   G +    KA+D RL   +KLL + GRLDLV+S +
Sbjct:  457 GAQNGKPNKYATPSASSLQQMLVQALHSNDTQLLEACLTYSNPEIIRNTVRRLPTTFVIPFLQQIVDKFQERPNRGKALLEWIKAILLIHTAYLMTV----------PDLVGKLSNFYKALDARLGVFQKLLGLHGRLDLVMSQI 591          
BLAST of jgi.p|Trimin1|351669 vs. uniprot
Match: A0A8H8DIE3_9FUNG (Dip2/Utp12 family-domain-containing protein (Fragment) n=1 Tax=Olpidium bornovanus TaxID=278681 RepID=A0A8H8DIE3_9FUNG)

HSP 1 Score: 80.1 bits (196), Expect = 5.190e-14
Identity = 52/165 (31.52%), Postives = 85/165 (51.52%), Query Frame = 0
Query:    1 MAFDNARNPDDASGGIT---KGLPSAAEKLRAVLKQLLQALHAKDEDLLQRCLSVTDPEIVDGVINRLPRKRVQPLYRLLVEQFEATPARGTSYSVWVHSMLSHHMSHIGGIQGMESAPKSKPPRSGLIELLQKAVDQRLPRLEKLLAVTGRLDLVLSHVPATPA 162
            +A D A+    AS G+    K +P  A K  ++   L+QALH+ D  LL+ CL+ T+PE++   + RLP + V PL R +V +F+  P R      WV + L  H  ++       + P+     SG  +    A+D RL    +L+ ++GRL++V + + A  A
Sbjct:  218 VAEDGAKPVCGASNGVVACEKVVPGGAPKASSLSTALVQALHSADHQLLELCLTHTNPEVIRSSVRRLPPQYVVPLLREIVTRFQRRPNRAAQLLEWVRAPLLLHAGYL------MTVPELVRELSGFYQ----AMDARLASFRRLMHLSGRLEMVNTQISARHA 372          
BLAST of jgi.p|Trimin1|351669 vs. uniprot
Match: A0A0L0GD02_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GD02_9EUKA)

HSP 1 Score: 78.6 bits (192), Expect = 2.750e-13
Identity = 50/148 (33.78%), Postives = 74/148 (50.00%), Query Frame = 0
Query:   10 DDASGGITKGLPSAAEKLRAVLKQLLQALHAKDEDLLQRCLSVTDPEIVDGVINRLPRKRVQPLYRLLVEQFEATPARGTSYSVWVHSMLSHHMSHIGGIQGMESAPKSKPPRSGLIELLQKAVDQRLPRLEKLLAVTGRLDLVLSHV 157
            DD     ++G  + A+ L    K L QALH+ D  LL+ C+S T+  +V   +  LP   V P    +V +F+A P RG     W+ +++  H S++       + P  +    GL  L    VD RL    KLLA+ GRLDL+LS +
Sbjct:  414 DDMPTKRSRGKTTKADSLA---KLLAQALHSNDLSLLEECISNTNEHVVRNTVQHLPTPYVIPFLEAIVAKFQAKPVRGAQLVPWIKTVMVVHTSYL------MTVPNVRESLGGLSSL----VDARLSVFRKLLALNGRLDLLLSQI 548          
BLAST of jgi.p|Trimin1|351669 vs. uniprot
Match: A0A8H7UN63_MORIS (Utp12 domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7UN63_MORIS)

HSP 1 Score: 76.6 bits (187), Expect = 1.280e-12
Identity = 46/140 (32.86%), Postives = 74/140 (52.86%), Query Frame = 0
Query:   18 KGLPSAAEKLRAVLKQLLQALHAKDEDLLQRCLSVTDPEIVDGVINRLPRKRVQPLYRLLVEQFEATPARGTSYSVWVHSMLSHHMSHIGGIQGMESAPKSKPPRSGLIELLQKAVDQRLPRLEKLLAVTGRLDLVLSHV 157
            K  P  A  L+   + L+QALH+ D  LL+ CL+ ++PEI+   + RLP   V P  + +V++F+  P RG     W+ ++L  H +++  +          P   G +     A+D RL   +KLL + GRLDLV+S +
Sbjct:  465 KHQPPPASSLQ---QMLVQALHSNDTQLLEACLTHSNPEIIRNTVRRLPTAWVIPFLQQIVDKFQERPNRGKVLLEWIKAILLIHTAYLMTV----------PDLVGKLSNFYMALDARLGVFQKLLGLHGRLDLVMSQI 591          
BLAST of jgi.p|Trimin1|351669 vs. uniprot
Match: A0A6A4ZZS5_9STRA (Utp12 domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZZS5_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 5.050e-12
Identity = 48/160 (30.00%), Postives = 79/160 (49.38%), Query Frame = 0
Query:    4 DNARNPDDASGGITKGLPSAAEKLRA------VLKQLLQALHAKDEDLLQRCLSVTDPEIVDGVINRLPRKRVQPLYRLLVEQFEATPARGTSYSVWVHSMLSHHMSHIGGIQGMESAPKSKPPRSGLIELLQKAVDQRLPRLEKLLAVTGRLDLVLSHV 157
            DN    DDA   +T   P    + +A      ++  L QAL +KD  LL+ CL + DP+++D    RL   RV P   LLVE+FE  P RG +   W+  ++ +H +++  +          P     +  L +++D R+    +L  ++GRL+LVL  +
Sbjct:   13 DNEDIDDDALTTVTLR-PHTLSRAKAQASSTSLVSVLEQALQSKDNALLEHCLRIHDPKVIDETCRRLNTTRVFPFLLLLVEKFEKRPTRGATMCQWIKFLMLNHTAYLMTV----------PDVIDKLSTLYQSLDARVKVFPQLHKLSGRLNLVLGQI 161          
BLAST of jgi.p|Trimin1|351669 vs. uniprot
Match: A0A7S4NW26_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NW26_GUITH)

HSP 1 Score: 73.6 bits (179), Expect = 9.720e-12
Identity = 45/134 (33.58%), Postives = 72/134 (53.73%), Query Frame = 0
Query:   24 AEKLRAVLKQLLQALHAKDEDLLQRCLSVTDPEIVDGVINRLPRKRVQPLYRLLVEQFEATPARGTSYSVWVHSMLSHHMSHIGGIQGMESAPKSKPPRSGLIELLQKAVDQRLPRLEKLLAVTGRLDLVLSHV 157
            A+ +  VLKQ   AL + D+ L+Q CL VT+ +I++  + RLP K V  L + +V +F+  PAR  +   W+ ++L+ H S +           S+P     +  L + V+ R+    KLL + GRLDL L+ V
Sbjct:  199 ADSIHVVLKQ---ALDSDDKALVQECLGVTNHQIINETVRRLPPKHVTMLLKKIVAKFQQKPARSLALVTWIKAILTQHTSLL----------MSQPDLIKNLTPLYQIVENRINTYHKLLKLEGRLDLALTQV 319          
BLAST of jgi.p|Trimin1|351669 vs. uniprot
Match: L1JNT7_GUITC (Utp12 domain-containing protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1JNT7_GUITC)

HSP 1 Score: 73.6 bits (179), Expect = 1.470e-11
Identity = 45/134 (33.58%), Postives = 72/134 (53.73%), Query Frame = 0
Query:   24 AEKLRAVLKQLLQALHAKDEDLLQRCLSVTDPEIVDGVINRLPRKRVQPLYRLLVEQFEATPARGTSYSVWVHSMLSHHMSHIGGIQGMESAPKSKPPRSGLIELLQKAVDQRLPRLEKLLAVTGRLDLVLSHV 157
            A+ +  VLKQ   AL + D+ L+Q CL VT+ +I++  + RLP K V  L + +V +F+  PAR  +   W+ ++L+ H S +           S+P     +  L + V+ R+    KLL + GRLDL L+ V
Sbjct:  463 ADSIHVVLKQ---ALDSDDKALVQECLGVTNHQIINETVRRLPPKHVTMLLKKIVAKFQQKPARSLALVTWIKAILTQHTSLL----------MSQPDLIKNLTPLYQIVENRINTYHKLLKLEGRLDLALTQV 583          
BLAST of jgi.p|Trimin1|351669 vs. uniprot
Match: W4H0X9_9STRA (Utp12 domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H0X9_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.640e-11
Identity = 48/160 (30.00%), Postives = 79/160 (49.38%), Query Frame = 0
Query:    4 DNARNPDDASGGITKGLPSAAEKLRA------VLKQLLQALHAKDEDLLQRCLSVTDPEIVDGVINRLPRKRVQPLYRLLVEQFEATPARGTSYSVWVHSMLSHHMSHIGGIQGMESAPKSKPPRSGLIELLQKAVDQRLPRLEKLLAVTGRLDLVLSHV 157
            DN    DDA   +T   P    + +A      ++  L QAL +KD  LL+ CL + DP+++D    RL   RV P   LLVE+FE  P RG +   W+  ++ +H +++  +          P     +  L +++D R+    +L  ++GRL+LVL  +
Sbjct:  432 DNEDIEDDALTTVTPR-PHTLSRAKAQASSTSLVSVLEQALQSKDNALLEHCLRIHDPKVIDETCRRLNTTRVFPFLLLLVEKFEKRPTRGATMCQWIKFLMLNHTAYLMTV----------PDVIDKLSTLYQSLDARVKVFPQLHKLSGRLNLVLGQI 580          
BLAST of jgi.p|Trimin1|351669 vs. uniprot
Match: A0A485LGV1_9STRA (Aste57867_21150 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LGV1_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 4.810e-11
Identity = 41/129 (31.78%), Postives = 69/129 (53.49%), Query Frame = 0
Query:   29 AVLKQLLQALHAKDEDLLQRCLSVTDPEIVDGVINRLPRKRVQPLYRLLVEQFEATPARGTSYSVWVHSMLSHHMSHIGGIQGMESAPKSKPPRSGLIELLQKAVDQRLPRLEKLLAVTGRLDLVLSHV 157
            +++  L QAL +KD  LL+ CL V DP+++D    RL   RV P   LLVE+FE  P RG +   W+  ++ +H +++  +          P     +  L +++D R+    +L  ++GRL+LVL  +
Sbjct:  445 SLVSVLEQALQSKDNALLENCLRVHDPKVIDETCRRLNTTRVFPFLLLLVEKFEKRPTRGATMCQWIKYLMLNHTAYLMTV----------PDVIEKLSTLYQSLDARVKVFPQLHKLSGRLNLVLGQI 563          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351669 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YGP9_9STRA9.440e-113100.00Utp12 domain-containing protein n=1 Tax=Tribonema ... [more]
A0A8H7PZ10_9FUNG1.340e-1432.41Utp12 domain-containing protein n=1 Tax=Umbelopsis... [more]
A0A8H8DIE3_9FUNG5.190e-1431.52Dip2/Utp12 family-domain-containing protein (Fragm... [more]
A0A0L0GD02_9EUKA2.750e-1333.78Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A8H7UN63_MORIS1.280e-1232.86Utp12 domain-containing protein n=1 Tax=Mortierell... [more]
A0A6A4ZZS5_9STRA5.050e-1230.00Utp12 domain-containing protein (Fragment) n=1 Tax... [more]
A0A7S4NW26_GUITH9.720e-1233.58Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
L1JNT7_GUITC1.470e-1133.58Utp12 domain-containing protein n=3 Tax=Guillardia... [more]
W4H0X9_9STRA2.640e-1130.00Utp12 domain-containing protein n=6 Tax=Aphanomyce... [more]
A0A485LGV1_9STRA4.810e-1131.78Aste57867_21150 protein n=1 Tax=Aphanomyces stella... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 24..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..218
NoneNo IPR availablePANTHERPTHR44267WD REPEAT-CONTAINING PROTEIN 43coord: 30..212
IPR007148Small-subunit processome, Utp12PFAMPF04003Utp12coord: 42..155
e-value: 1.3E-14
score: 54.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_96contigContig_96:387275..389640 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351669mRNA_13070Tribonema minus UTEX_B_3156 mRNAContig_96 387215..389640 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351669|estExt_Genemark1.C_Ctg_960045 ID=Trimin1|351669|estExt_Genemark1.C_Ctg_960045|Name=jgi.p|Trimin1|351669|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=219bp
MAFDNARNPDDASGGITKGLPSAAEKLRAVLKQLLQALHAKDEDLLQRCL
SVTDPEIVDGVINRLPRKRVQPLYRLLVEQFEATPARGTSYSVWVHSMLS
HHMSHIGGIQGMESAPKSKPPRSGLIELLQKAVDQRLPRLEKLLAVTGRL
DLVLSHVPATPAANAAASANSGSDSGGGSESDDVGRETGEVSGQGDTDAE
EDAQDTESEASEAGSDAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007148SSU_processome_Utp12