Trimin1|351634|estExt_Genemark1.C_Ctg_950046 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351634
Unique NameTrimin1|351634|estExt_Genemark1.C_Ctg_950046
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length117
Homology
BLAST of jgi.p|Trimin1|351634 vs. uniprot
Match: A0A835YGU3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGU3_9STRA)

HSP 1 Score: 145 bits (365), Expect = 9.850e-43
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
Query:    1 MKAVAAYLLCVLGGNASPSADDVSGVITAIGGEADDSAIAALISDMAGKSAEEVVAAGQKRLETVSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGGGEGGDY 116
            MKAVAAYLLCVLGGNASPSADDVSGVITAIGGEADDSAIAALISDMAGKSAEEVVAAGQKRLETVSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGGGEGGDY
Sbjct:    1 MKAVAAYLLCVLGGNASPSADDVSGVITAIGGEADDSAIAALISDMAGKSAEEVVAAGQKRLETVSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGGGEGGDY 116          
BLAST of jgi.p|Trimin1|351634 vs. uniprot
Match: A0A1V9ZUV4_9STRA (Ribosomal protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZUV4_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 9.570e-21
Identity = 82/116 (70.69%), Postives = 94/116 (81.03%), Query Frame = 0
Query:    1 MKAVAAYLLCVLGGNASPSADDVSGVITAIGGEADDSAIAALISDMAGKSAEEVVAAGQKRLETVSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGGGEGGDY 116
            M+ VAA+LLCVLGGNA+PS  DVS VITA+GGEAD+  +A LI ++ GK   EV+A GQK+L TVS+G   XXXXXXXXXXXXXXXXXXXXXXXXXX  D+GGGMDMFGGG   DY
Sbjct:    1 MRHVAAFLLCVLGGNATPSVADVSAVITAVGGEADEERLALLIKELEGKDIAEVIAEGQKKLSTVSIGAASXXXXXXXXXXXXXXXXXXXXXXXXXX-ADLGGGMDMFGGGS--DY 113          
BLAST of jgi.p|Trimin1|351634 vs. uniprot
Match: A0A835ZFT3_9STRA (60s acidic ribosomal protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFT3_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.720e-18
Identity = 78/116 (67.24%), Postives = 99/116 (85.34%), Query Frame = 0
Query:    1 MKAVAAYLLCVLGGNASPSADDVSGVITAIGGEADDSAIAALISDMAGKSAEEVVAAGQKRLETVSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGGGEGGDY 116
            M+ +A Y++ VLGGNASPSA+DV+  ++++G EAD++ ++ LI++M GK   EV+ AG+K+L ++   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGGGEGGDY
Sbjct:    1 MRHLAVYMMLVLGGNASPSAEDVTKALSSVGIEADEARLSQLIAEMEGKDLNEVMEAGKKKLASLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGGGEGGDY 116          
BLAST of jgi.p|Trimin1|351634 vs. uniprot
Match: A0A1V9YWD7_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YWD7_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.870e-17
Identity = 77/116 (66.38%), Postives = 89/116 (76.72%), Query Frame = 0
Query:    1 MKAVAAYLLCVLGGNASPSADDVSGVITAIGGEADDSAIAALISDMAGKSAEEVVAAGQKRLETVSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGGGEGGDY 116
            M+ VAAYLL VLGGN  P+ +DV+ VITA+GGE D   +A L+ ++ GK   EV+A GQK+L TVSVG    XXXXXXXXXXXXXXXXXXXXXXXXX  D+GGGMDMFGGG   DY
Sbjct:    1 MRHVAAYLLLVLGGNTKPTVEDVTKVITAVGGEVDADRLATLVKELEGKDIAEVIAEGQKKLATVSVGASSAXXXXXXXXXXXXXXXXXXXXXXXXX-ADLGGGMDMFGGGS--DY 113          
BLAST of jgi.p|Trimin1|351634 vs. uniprot
Match: A0A485KP81_9STRA (Aste57867_9957 protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485KP81_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 5.910e-17
Identity = 75/116 (64.66%), Postives = 87/116 (75.00%), Query Frame = 0
Query:    1 MKAVAAYLLCVLGGNASPSADDVSGVITAIGGEADDSAIAALISDMAGKSAEEVVAAGQKRLETVSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGGGEGGDY 116
            M+ VAA+LL VLGGN +PSA DV  VITA+GGE D   +  L+ ++ GK   EV+A GQK+L  VS+G     XXXXXXXXXXXXXXXXXXXXXXXXX D+GGGMDMFGGG   DY
Sbjct:    1 MRHVAAFLLVVLGGNTTPSAADVEKVITAVGGEVDSEKLETLLKEVEGKDIYEVIAEGQKKLANVSIGGASAGXXXXXXXXXXXXXXXXXXXXXXXXXADLGGGMDMFGGGS--DY 114          
BLAST of jgi.p|Trimin1|351634 vs. uniprot
Match: A0A067BQ39_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BQ39_SAPPC)

HSP 1 Score: 79.3 bits (194), Expect = 8.150e-17
Identity = 76/116 (65.52%), Postives = 87/116 (75.00%), Query Frame = 0
Query:    1 MKAVAAYLLCVLGGNASPSADDVSGVITAIGGEADDSAIAALISDMAGKSAEEVVAAGQKRLETVSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGGGEGGDY 116
            M+ VAA+LL VLGGN +PS  DVS +ITA+GGE D   +  LI ++ GK   EV+A GQK+L TVSVG     XXXXXXXXXXXXXXXXXXXXXXXX  D+GGGMDMFGGG   DY
Sbjct:    1 MRHVAAFLLAVLGGNTTPSVADVSAIITAVGGEVDTERLETLIKELEGKDIYEVIAEGQKKLATVSVGASSGAXXXXXXXXXXXXXXXXXXXXXXXX-ADLGGGMDMFGGGS--DY 113          
BLAST of jgi.p|Trimin1|351634 vs. uniprot
Match: A0A662XMM2_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XMM2_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 2.980e-16
Identity = 76/116 (65.52%), Postives = 90/116 (77.59%), Query Frame = 0
Query:    1 MKAVAAYLLCVLGGNASPSADDVSGVITAIGGEADDSAIAALISDMAGKSAEEVVAAGQKRLETVSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGGGEGGDY 116
            M+ VAA LLCVLGGNA+PS  DV  V+ + GGE D      L+ ++ GK+ EEVVAAG+ +L +V+VG  XXXXXXXXXXXXXXXXXXXXXXXXXX   D+GGGMDMFGGG+ GDY
Sbjct:   38 MRHVAALLLCVLGGNATPSVADVEKVVKSFGGEFDQEKTELLVKELEGKNIEEVVAAGKAKLSSVTVGASXXXXXXXXXXXXXXXXXXXXXXXXXX--ADLGGGMDMFGGGDDGDY 151          
BLAST of jgi.p|Trimin1|351634 vs. uniprot
Match: A0A6A4ZYF9_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZYF9_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 2.630e-15
Identity = 76/110 (69.09%), Postives = 88/110 (80.00%), Query Frame = 0
Query:    1 MKAVAAYLLCVLGGNASPSADDVSGVITAIGGEADDSAIAALISDMAGKSAEEVVAAGQKRLETVSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGG 110
            M+ VAA+LL VLGGN +PSA DV  VIT++GGE D   + AL+ ++ GK   EV+AAGQ +L TVSVG XXXXXXXXXXXXXXXXXXXXXXXXXXX   D+GGGMDMFGG
Sbjct:    2 MRHVAAFLLLVLGGNTTPSAADVEKVITSVGGEVDSEQLEALLKEVEGKDIYEVIAAGQAKLATVSVGGXXXXXXXXXXXXXXXXXXXXXXXXXXX--ADLGGGMDMFGG 109          
BLAST of jgi.p|Trimin1|351634 vs. uniprot
Match: A0A6A3U9U9_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3U9U9_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 3.560e-15
Identity = 70/112 (62.50%), Postives = 85/112 (75.89%), Query Frame = 0
Query:    1 MKAVAAYLLCVLGGNASPSADDVSGVITAIGGEADDSAIAALISDMAGKSAEEVVAAGQKRLETVSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGGGE 112
            M+ VAA LLCVLGGNA+PS  D+  V+T+ GGE +      L+ ++ GK+ EEVVAAG+ ++ TVSVG     XXXXXXXXXXXXXXXXXXXXXX   +DMGGGMDMFGGG+
Sbjct:   43 MRHVAALLLCVLGGNATPSVADLEKVVTSFGGEFNQEQAEKLVKELEGKNIEEVVAAGKAKIATVSVGAAPAAXXXXXXXXXXXXXXXXXXXXXX---IDMGGGMDMFGGGD 151          
BLAST of jgi.p|Trimin1|351634 vs. uniprot
Match: A0A6G0XK03_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XK03_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 3.910e-15
Identity = 75/111 (67.57%), Postives = 88/111 (79.28%), Query Frame = 0
Query:    1 MKAVAAYLLCVLGGNASPSADDVSGVITAIGGEADDSAIAALISDMAGKSAEEVVAAGQKRLETVSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-VDMGGGMDMFGG 110
            M+ VAA+LL VLGGNA+PS  DV  VITA+GGE D   + AL+ ++ GK   E++AAGQ +L TVSVG XXXXXXXXXXXXXXXXXXXXXXXXXX    +D+GGGMDMFGG
Sbjct:    1 MRHVAAFLLVVLGGNATPSFADVEKVITAVGGEVDSERLEALLKEVEGKDVYELIAAGQAKLATVSVGGXXXXXXXXXXXXXXXXXXXXXXXXXXEEADLDLGGGMDMFGG 111          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351634 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YGU3_9STRA9.850e-43100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1V9ZUV4_9STRA9.570e-2170.69Ribosomal protein n=1 Tax=Achlya hypogyna TaxID=12... [more]
A0A835ZFT3_9STRA2.720e-1867.2460s acidic ribosomal protein-domain-containing pro... [more]
A0A1V9YWD7_9STRA2.870e-1766.38Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A485KP81_9STRA5.910e-1764.66Aste57867_9957 protein n=2 Tax=Aphanomyces TaxID=1... [more]
A0A067BQ39_SAPPC8.150e-1765.52Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A662XMM2_9STRA2.980e-1665.52Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A6A4ZYF9_9STRA2.630e-1569.09Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A6A3U9U9_9STRA3.560e-1562.50Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A6G0XK03_9STRA3.910e-1567.57Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF00428Ribosomal_60scoord: 17..105
e-value: 2.1E-13
score: 50.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..116
IPR038716Ribosomal protein P1/P2, N-terminal domainGENE3D1.10.10.1410coord: 1..59
e-value: 9.7E-21
score: 75.7
IPR044076Ribosomal protein P2PANTHERPTHR2114160S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBERcoord: 1..108
IPR044076Ribosomal protein P2CDDcd05833Ribosomal_P2coord: 1..66
e-value: 4.08433E-19
score: 74.2221
IPR027534Ribosomal protein L12/P1/P2 familyHAMAPMF_01478Ribosomal_L12_archcoord: 2..109
score: 12.492674

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_95contigContig_95:348357..351015 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351634mRNA_14665Tribonema minus UTEX_B_3156 mRNAContig_95 347858..351111 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351634|estExt_Genemark1.C_Ctg_950046 ID=Trimin1|351634|estExt_Genemark1.C_Ctg_950046|Name=jgi.p|Trimin1|351634|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=117bp
MKAVAAYLLCVLGGNASPSADDVSGVITAIGGEADDSAIAALISDMAGKS
AEEVVAAGQKRLETVSVGGGDGGGGGGGAGGAAAAAPVEEKKEEEEEEVD
MGGGMDMFGGGEGGDY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038716P1/P2_N_sf
IPR044076Ribosomal_P2
IPR027534Ribosomal_L12/P1/P2