Trimin1|351370|estExt_Genemark1.C_Ctg_880065 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351370
Unique NameTrimin1|351370|estExt_Genemark1.C_Ctg_880065
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length427
Homology
BLAST of jgi.p|Trimin1|351370 vs. uniprot
Match: A0A836C905_9STRA (Endoplasmic reticulum vesicle transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C905_9STRA)

HSP 1 Score: 847 bits (2187), Expect = 3.850e-310
Identity = 426/426 (100.00%), Postives = 426/426 (100.00%), Query Frame = 0
Query:    1 MSLSSIASFATDTIKDEGIMARAKRLDFYGAPKAEFRKGTVHGALMSAVAFLLACVLIARELQYSMAVRTTTNLEVDSRFDPAGRRTNVTFDIKFPRIACDHISISAEDNNGAPQHNVQHHVTKIRLDSQGYMLDAGSRHEVGDTIKDETALLGREGEAAARKSLADSAKDAPAQGGCGDCYGAGEPGECCDTCDEVKDKYRKMGWSFSPDEVPQCRPGFVPGAVAAKPEAAAPPREGCYLSGYLDLSKARGNVHFAPSSKAGAAVAGGAGDTAGAMLLRTFAAFNTTHTIDKLRFGENAPGMVYPLEGESRVIRDSYGMYQYYIKVVPTTYKPLSGPSVTTNQYSVTEHLKHVEPGSGRGLPGVYLYYELSTITASIEELRPGLLKFLTSVCAIVGGLYTVLGLIDHVITAVRKTHGLCHMRRCV 426
            MSLSSIASFATDTIKDEGIMARAKRLDFYGAPKAEFRKGTVHGALMSAVAFLLACVLIARELQYSMAVRTTTNLEVDSRFDPAGRRTNVTFDIKFPRIACDHISISAEDNNGAPQHNVQHHVTKIRLDSQGYMLDAGSRHEVGDTIKDETALLGREGEAAARKSLADSAKDAPAQGGCGDCYGAGEPGECCDTCDEVKDKYRKMGWSFSPDEVPQCRPGFVPGAVAAKPEAAAPPREGCYLSGYLDLSKARGNVHFAPSSKAGAAVAGGAGDTAGAMLLRTFAAFNTTHTIDKLRFGENAPGMVYPLEGESRVIRDSYGMYQYYIKVVPTTYKPLSGPSVTTNQYSVTEHLKHVEPGSGRGLPGVYLYYELSTITASIEELRPGLLKFLTSVCAIVGGLYTVLGLIDHVITAVRKTHGLCHMRRCV
Sbjct:    1 MSLSSIASFATDTIKDEGIMARAKRLDFYGAPKAEFRKGTVHGALMSAVAFLLACVLIARELQYSMAVRTTTNLEVDSRFDPAGRRTNVTFDIKFPRIACDHISISAEDNNGAPQHNVQHHVTKIRLDSQGYMLDAGSRHEVGDTIKDETALLGREGEAAARKSLADSAKDAPAQGGCGDCYGAGEPGECCDTCDEVKDKYRKMGWSFSPDEVPQCRPGFVPGAVAAKPEAAAPPREGCYLSGYLDLSKARGNVHFAPSSKAGAAVAGGAGDTAGAMLLRTFAAFNTTHTIDKLRFGENAPGMVYPLEGESRVIRDSYGMYQYYIKVVPTTYKPLSGPSVTTNQYSVTEHLKHVEPGSGRGLPGVYLYYELSTITASIEELRPGLLKFLTSVCAIVGGLYTVLGLIDHVITAVRKTHGLCHMRRCV 426          
BLAST of jgi.p|Trimin1|351370 vs. uniprot
Match: A0A7S3H281_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H281_9STRA)

HSP 1 Score: 281 bits (718), Expect = 2.590e-87
Identity = 172/410 (41.95%), Postives = 232/410 (56.59%), Query Frame = 0
Query:   24 KRLDFYGAPKAEFRKGTVHGALMSAVAFLLACVLIARELQYSMAVRTTTNLEVDSRFDPAGRRTN---VTFDIKFPRIACDHISISAEDNNGAPQHNVQHHVTKIRLDSQGYMLDAGSRHEVGDTIKDETALLGREGEAAARKSLADSAKDAPAQ----GGCGDCYGAGEPGECCDTCDEVKDKYRKMGWSFSPDEVPQCRPGFVPGAVAAKPEAAAPPREGCYLSGYLDLSKARGNVHFAPSSK----AGAAVAGGAGDTAGAMLLR-----TFAAFNTTHTIDKLRFGENAPGMVYPLEGESRVIRDSYGMYQYYIKVVPTTYKPL-SGPSVTTNQYSVTEHLKHVEPGSGRGLPGVYLYYELSTITASIEELRPGLLKFLTSVCAIVGGLYTVLGLIDHVITAVRKT 416
            K++D +     +FR  T  GAL+S ++ ++   L   E+ Y +   T  +L V+      G RTN   V FDI F  I C+ +S+ A D+ G PQ +  H + K +L   G       R E+G+T++ E  L     E   +   AD  K         G CG+CYGAG PG+CC TC +VK  Y+++GW F P  + QC       A  A          GC L G LDL++  G+ H AP  K    AG A +G  G  AG   L      TF  FN +HTI+ L FG+N PG+  PL+GE+R ++D++GMYQYYIKVVPT YK L S   + +NQY+VTEH+ H+ PGSGRGLPGVY +YE+S I A  EE R G+L F+TS CAIVGG ++V+GL+D  + AV KT
Sbjct:   16 KKIDAFPKAFDDFRVKTTTGALVSIISIIIMATLFFSEMSYFLKTETVDHLYVN------GTRTNKLHVDFDISFHDIPCNLLSVDAMDDTGVPQKDAVHEIYKHKLSVAGEKQGFPERQELGNTVRTEAEL-----EDLVKSQSADLVKQGAILKEQIGACGNCYGAGSPGQCCQTCLDVKQAYQRVGWRFKPHGIIQC----TSEAFMANMNEQFAEDGGCQLYGSLDLNRGSGHFHIAPHKKLHQPAGDA-SGRPGQNAGLFNLMDLISFTFDQFNVSHTINTLSFGDNFPGIKSPLDGETRGVQDTHGMYQYYIKVVPTRYKALYSTTEIQSNQYAVTEHMSHLAPGSGRGLPGVYFHYEVSPIQALFEEKRGGMLGFITSCCAIVGGAFSVMGLVDVFLGAVLKT 409          
BLAST of jgi.p|Trimin1|351370 vs. uniprot
Match: A0A7S2W0R9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0R9_9STRA)

HSP 1 Score: 278 bits (711), Expect = 1.210e-86
Identity = 165/404 (40.84%), Postives = 224/404 (55.45%), Query Frame = 0
Query:   19 IMARAKRLDFYGAPKAEFRKGTVHGALMSAVAFLLACVLIARELQYSMAVRTTTNLEVDSRFDPAGRRTNVTFDIKFPRIACDHISISAEDNNGAPQHNVQHHVTKIRLDSQGYMLDAGSRHEVGDTIKDETALLGREGEAAARKSLADSAKDAPAQGGCGDCYGA-GEPGECCDTCDEVKDKYRKMGWSFSPDEVPQCRPGFVPGAVAAKPEAAAPPREGCYLSGYLDLSKARGNVHFAPSSKAGAAVAGGAGDTAGAMLLRTFAAFNTTHTIDKLRFGENAPGMVYPLEGESRVIRDSYGMYQYYIKVVPTTYKPLSG--PSVTTNQYSVTEHLKHVEPGSGRGLPGVYLYYELSTITASIEELRPGLLKFLTSVCAIVGGLYTVLGLIDHVI-TAVRKTHG 418
            +M   + LD +     EFR  T HGA+ S VA +    L   E  Y   V     L V+S          V FDIKF  I CD +S+ A D +G  Q  + H+V K +LD++G   D   RH    T++ E  L                  D   +  CG+CYGA  +P  CC+TC+EV+  Y   GW+F PDE+ QC+P  V  ++  + E      EGC + G ++L+K  GN HFAP     AA   G    +  M L T+ +FN +H I  L FG + PG+  PL+ +SR + D  GMYQYY+KVVPTTYK L+     + +NQYSVTEHL+HV PGSGRGLPGV+ +YE+S + A+ EE R G L+F+ SVCAI+GG++T++GL D V+  A  K  G
Sbjct:    8 VMDTLRSLDAFPKHGEEFRVRTTHGAMASVVAIVAMLYLFVSEFYYYSRVEVVDRLVVNSSHADT---LKVRFDIKFHHIPCDLLSLDAMDTSGQRQEELVHNVFKRKLDAEGNKADRPERHRELGTLQHEHQL-----------------SDPGEKPACGNCYGARDDPDACCNTCEEVRIAYEDKGWAFHPDEIEQCQPAKVLSSIDPETE------EGCNIFGNVELTKLSGNFHFAPGEHLQAAARSGQMSFSDLMSL-TYKSFNISHDIRTLAFGNHFPGIQNPLDRQSRSVSDGSGMYQYYVKVVPTTYKFLNRRRKDLVSNQYSVTEHLRHVTPGSGRGLPGVWFFYEVSPVQATFEETRQGTLEFIASVCAILGGVFTIIGLADRVVGVAFEKLRG 384          
BLAST of jgi.p|Trimin1|351370 vs. uniprot
Match: W7TMC0_9STRA (Endoplasmic reticulum-golgi intermediate compartment protein 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMC0_9STRA)

HSP 1 Score: 275 bits (704), Expect = 4.580e-85
Identity = 164/421 (38.95%), Postives = 225/421 (53.44%), Query Frame = 0
Query:   15 KDEGIMARAKRLDFYGAPKAEFRKGTVHGALMSAVAFLLACVLIARELQYSMAVRTTTNLEVDSRFDPAGRRTNVTFDIKFPRIACDHISISAEDNNGAPQHNVQHHVTKIRLDSQGYMLDAGSRHEVGDTIKDETALLGREGEAAARKSLADSAKDAPAQGG--------------------CGDCYGAGEPGECCDTCDEVKDKYRKMGWSFSPDEVPQCRPGFVPGAVAAKPEAAAPPREGCYLSGYLDLSKARGNVHFAPSSKAGAAVAGGAGDTAGAMLLRTFAAFNTTHTIDKLRFGENAPGMVYPLEGESRVIRDSYGMYQYYIKVVPTTYKPLSGPSVTTNQYSVTEHLKHVEPGSGRGLPGVYLYYELSTITASIEELRPGLLKFLTSVCAIVGGLYTVLGLIDHVITAVRK 415
            KD  +  R +RLD++   K +F+  T +G   S VA      L   EL+YSM      ++ V+S  D    R    F++ FP ++C  +S  A D  G  Q  V+ HV K RLDS G  + A + H++GDT  +E  LL  E ++ A+        +   + G                    CGDCYGAGEPG+CC+TC EVK  Y   GW+F    V QC+   +  +     E      EGC + G L L+   GNVHFAP  +   + A    D    ++  TF  FN +H I  L  GE  PG   PL  + R + D YGMYQYY+KVVPT YK LS P   +NQY+V+EH++H+ PGS RGLPGV+ +Y+ S +    +E R GLL FLTSVCAIVGG+++V G++D V+  + K
Sbjct:    9 KDLTLYERLRRLDYHPKTKDDFKVRTAYGGATSVVALACMIFLFFTELKYSMEKEIVDHMYVNSSRDT---RLLFNFNLTFPSVSCSLLSADALDPLGNKQEGVESHVFKTRLDSMGNPIAAKTWHKLGDTFTEEDLLLKHEEDSRAQLEXXXXXXEKLGEEGDGQQVGEDGKPRGRNLKRRKCGDCYGAGEPGQCCNTCAEVKQAYDSKGWAFIGLNVEQCKQENLQVSFGDGAE------EGCNIHGSLLLTHDSGNVHFAPGEQLRQSGALNVAD----LVTFTFLQFNVSHEIHHLSLGEEFPGFRSPLSNQKRSVADGYGMYQYYLKVVPTIYKHLSQPPTVSNQYAVSEHIRHINPGSNRGLPGVWFFYDTSPVHVEFQERRKGLLPFLTSVCAIVGGVFSVFGVVDGVVHNLMK 416          
BLAST of jgi.p|Trimin1|351370 vs. uniprot
Match: A0A7S4IKK9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IKK9_9STRA)

HSP 1 Score: 274 bits (701), Expect = 1.400e-84
Identity = 161/417 (38.61%), Postives = 232/417 (55.64%), Query Frame = 0
Query:   18 GIMARAKRLDFYGAPKAEFRKGTVHGALMSAVAFLLACVLIARELQYSMAVRTTTNLEVDSRFDPAGRRTNVTFDIKFPRIACDHISISAEDNNGAPQH---NVQHHVTKIRLDSQGYMLDAGSRHEVGDTIKDETAL-------LGREGEAAARKSLADSAKDAPAQGGCGDCYGAGEPGECCDTCDEVKDKYRKMGWSFSPDEVPQCRPGFVPGAVAAKPEAAAPPREGCYLSGYLDLSKARGNVHFAPSSKAGAAVAGGAGDTAGAMLLRT------FAAFNTTHTIDKLRFGENAPGMVYPLEGESRVIRDSYGMYQYYIKVVPTTYKPLSGPSVTTNQYSVTEHLKHVEPGSGRGLPGVYLYYELSTITASIEELRPGLLKFLTSVCAIVGGLYTVLGLIDHVITAVRKTHG 418
            G   R + LD +    AEFR  T+ GAL+S    L    L+  E  +         + V++   PAG    + FDI F  + C  +++ A+D  G  Q    +  H V K R++  G M+   S+ E+G T  DE +L       LG E E   ++ +  +A D+  +  CGDCYGAGE GECC+TCD+VK  Y++  W     +V QCR            ++A    EGC + G + LS   GN+H AP    G    G     A  +   T      F  FN +HT++++RFG+  PG ++ L+G+ R++ D YGMYQYY++VVPT Y+ L G  + TNQYSVTEH++HV PGSGRGLPGV+++YE+S +   +EE R G ++FLTSVCA VGG++TV+G+ D  I A  ++ G
Sbjct:   30 GFAERLRSLDAHTPAAAEFRVRTIQGALLSVFTLLSIAYLVRIEYGFHFLTEVLDRVHVNAT-TPAG--LEMEFDITFHSVPCALLNVDAQDPTGQSQSLHLDRTHRVFKHRINKNGKMIGRKSKFELGGTFADERSLRDMGKEELGLEDE---KEEVEGTASDSSDEDECGDCYGAGEEGECCNTCDDVKRAYQRRSWHIDLAKVKQCRKDV---------KSADEEGEGCNVHGTVALSTGGGNLHLAPGR--GLEKFGKEKQDADFVTSLTEFIEEAFETFNVSHTVNRIRFGQEYPGDLHQLDGQKRIVEDDYGMYQYYVQVVPTVYRKLDGTEIATNQYSVTEHMRHVTPGSGRGLPGVFIFYEVSALHVEMEEYRRGWIRFLTSVCAAVGGVFTVMGMADRAIFARSRSTG 429          
BLAST of jgi.p|Trimin1|351370 vs. uniprot
Match: D7FL32_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL32_ECTSI)

HSP 1 Score: 274 bits (701), Expect = 2.490e-84
Identity = 164/424 (38.68%), Postives = 238/424 (56.13%), Query Frame = 0
Query:   20 MARAKRLDFYGAPKAEFRKGTVHGALMSAVAFLLACVLIARELQYSMAVRTTTNLEVDSRFDPAGRRTNVTFDIKFPRIACDHISISAEDNNGAPQHNVQHHVTKIRLDSQGYMLDAGSRHEVGDTIKDETALLGREGEA--------------------------AARKSLADSAKDAPAQGGCGDCYGAGEPGECCDTCDEVKDKYRKMGWSFSPDEVPQCRPGFVPGAVAAKPEAAAPPREGCYLSGYLDLSKARGNVHFAPSSKAGAAVAGGAGDTAGAMLLRT-FAAFNTTHTIDKLRFGENAP-GMVYP--------LEGESRVIRDSYGMYQYYIKVVPTTYKPLSGPSVTTNQYSVTEHLKHVEPGSGRGLPGVYLYYELSTITASIEELRPGLLKFLTSVCAIVGGLYTVLGLID 407
            + + KRLD Y  PK EF++ TVHGA+++ V      VL  REL +SM   T  NL V+S              + F RI C  +S+ AED  G PQ +++H VT+ RLDS G  LD G +HE+G+T+K   A++ +E E                             +++L D+A     +  C +CYGAG  GECC TC++V+  YR+ GW  +P E+P C    +    A   E+     EGC L+G+L++S+  GN HFAP  +    +   A + +    ++    +FNTTHTI+ L FG+  P G   P        LEG  + ++D++ M+QY++++VPT Y+  +G +V +NQYS TEHLKHV  G+ RGLPGVY YYE+S + A +EE R G L FLT  C +VGG+YT+LGL++
Sbjct:   26 LRKLKRLDIYSRPKREFQRATVHGAMVTIVLVGAVLVLTWRELVFSMKRETVENLFVNSTIXXXXXXXXX---VVFARIPCGFLSLDAEDALGIPQEDLRHDVTRTRLDSIGRALDDGEKHEMGNTLK---AVIAKEEEKXXXXXXXXXXXXXXXXXXXXXXXXXXVEQRALEDTATTGQ-EDEC-NCYGAGAEGECCRTCEDVRKAYRRKGWRLNPAEIPACAGEALSANSANTMESPPVENEGCRLAGHLEVSRTEGNFHFAPGHR----LHRHANELSFVDRIQVALESFNTTHTINTLTFGDQPPPGHASPKHAVASTVLEGHQKTVQDTHAMHQYFLQLVPTVYRLDNGETVHSNQYSATEHLKHVHDGTSRGLPGVYFYYEVSPVQALVEEKRKGFLAFLTGACGVVGGVYTILGLVN 437          
BLAST of jgi.p|Trimin1|351370 vs. uniprot
Match: A0A7S3PYC5_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYC5_9STRA)

HSP 1 Score: 266 bits (680), Expect = 8.820e-82
Identity = 158/413 (38.26%), Postives = 231/413 (55.93%), Query Frame = 0
Query:   16 DEGIMARAKRLDFYGAPKAEFRKGTVHGALMSAVAFLLACVLIARELQYSMAVRTTTNLEVDSRFDPAGRRTNVTFDIKFPRIACDHISISAEDNNGAPQH---NVQHHVTKIRLDSQGYMLDAGSRHEVGDTIKDETALLGREGEAAARKSL--ADSAKDAPAQGGCGDCYGAGEPGECCDTCDEVKDKYRKMGWSFSPD-EVPQCRPGFVPGAVAAKPEAAAPPREGCYLSGYLDLSKARGNVHFAPSSKAGAAVAGGAGDTAGAMLL---------RTFAAFNTTHTIDKLRFGENAPGMVYPLEGESRVIRDSYGMYQYYIKVVPTTYKPLSGPSVTTNQYSVTEHLKHVEPGSGRGLPGVYLYYELSTITASIEELRPGLLKFLTSVCAIVGGLYTVLGLIDHVITAV 413
            ++ +  R K  D++    +EFR  T +GAL+S    LL   LI  E QY++       + V++   PAG    + FD+ FP +AC  +++ A D  G PQ    +  H V K R+D  G+ +   S+ E+G+T + E  +    GE A +  +  A    D      CG CYGAG+  ECC+TCD+VK  Y++ GW F  D +V QC+          +  +     EGC + G + LS   GN+H AP             +  G  +L         + F  F+ +H ++KLRFG+  PG  + L+GE R+I D+YGMYQYYIK+VPT YK L+G +V TNQYSVTEH++HV PGS RGLPG++ YYE+S +   I E R G ++FLTSV A+VGG+++ + L+D+ I +V
Sbjct:    9 EKTVSQRLKNFDYHTTVASEFRVKTSNGALLSVATLLLILYLILTEFQYNLTPSLRERVHVNAT-TPAG--IEMEFDVTFPNVACALVNVDAGDPLGQPQSMHIDRTHRVFKHRMDKNGHFVGKKSKFELGNTFQAEEHI----GEYAEKTDMEFAKDEDDYYYDKECGSCYGAGDQDECCNTCDDVKRAYQRKGWLFPKDLDVKQCK---------QQKNSHDMEGEGCNVHGVVALSSGGGNLHLAPGHDM---------ENFGKQVLFSSLEDFINQAFETFDVSHKVNKLRFGKTYPGEYHQLDGEERMIEDAYGMYQYYIKIVPTVYKFLNGTTVETNQYSVTEHMRHVSPGSSRGLPGIFFYYEVSALHVEIVEYRQGWIRFLTSVAAVVGGVFSTMSLLDNYIFSV 396          
BLAST of jgi.p|Trimin1|351370 vs. uniprot
Match: A0A482SKL0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SKL0_9ARCH)

HSP 1 Score: 265 bits (677), Expect = 1.110e-81
Identity = 147/343 (42.86%), Postives = 209/343 (60.93%), Query Frame = 0
Query:   72 TNLEVDSRFDPAGRRTNVT--FDIKFPRIACDHISISAEDNNGAPQHNVQHHVTKIRLDSQGYMLDAGSRHEVGDTIKDETALLGREGEAAARKSLADSAKDAPAQGGCGDCYGAGEPGECCDTCDEVKDKYRKMGWSFSPDEVPQCRPGFVPGAVAAKPEAAAPPREGCYLSGYLDLSKARGNVHFAPSSKAGAAVAGGAGDTAGAMLLRTFAAFNTTHTIDKLRFGENAPGMVYPLEGESRVIRDSYGMYQYYIKVVPTTYKPLSGPSVTTNQYSVTEHLKHVEPGSGRGLPGVYLYYELSTITASIEELRPGLLKFLTSVCAIVGGLYTVLGLIDHVITA 412
            T ++VD  F    R + +T  FD+ F  I+C  +++ A D+ G  Q +  H + K RL  +G  + +  + ++G T+ +E  L     E  A+++L    K   A G CG CYGAG PG+CC+TC +VKD Y ++GW F    V QC        ++   E  A    GC + G L LSK  G+ H AP+ K     A G       ++  TF  FN TH+++ L FG++ PG+  PL+G+ R+++D++GMYQY+IKVVPT YKPL+ P V +NQYSVTEH+  + PGSGRGLPGVY YYE+S I A IEE +   + FLTSVCAIVGG YTV+GL+D ++++
Sbjct:   38 TQMKVDHLFVNTTRASQLTIDFDLSFTSISCSMLAVDAFDDRGMSQVDAVHEIYKHRLSPEGEKVGSAEQADLGHTLLNEAQL-----ENIAKETLEMKEKAKEAIGVCGKCYGAGRPGQCCNTCQDVKDAYERLGWHFKAQGVVQCS---TEAYISTLREQYAEDG-GCQVYGRLHLSKTSGHFHIAPTKKVHEKQANGGMFNILDLISFTFDQFNVTHSVNALSFGDHFPGINSPLDGQHRLVKDTHGMYQYFIKVVPTRYKPLNKPEVQSNQYSVTEHMSTLAPGSGRGLPGVYFYYEVSPIQAFIEEKKRSWMHFLTSVCAIVGGAYTVMGLLDILLSS 371          
BLAST of jgi.p|Trimin1|351370 vs. uniprot
Match: A0A7S1CIR7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CIR7_9STRA)

HSP 1 Score: 265 bits (676), Expect = 1.860e-80
Identity = 167/429 (38.93%), Postives = 227/429 (52.91%), Query Frame = 0
Query:   18 GIMARAKRLDFYGAPKAE---FRKGTVHGALMSAVAFLLACVLIARELQYSMAVRTTTNLEVDSRF-------------------DPAGRRTNVTFDIKFPRIACDHISISAEDNNGAPQHNVQHHVTKIRLDSQGYMLDAGSRHEVGDTIKDETALLGREGEAAARKSLADSAKDAPA---------QGGCGDCYGAGEPGECCDTCDEVKDKYRKMGWSFSPDEVPQCRP-GFVPGAVAAKPEAAAPPREGCYLSGYLDLSKARGNVHFAPSSKAGAAVAGGAGDTAGAMLLRTFAAFNTTHTIDKLRFGENAPGMVYPLEGESRVIRDSY-GMYQYYIKVVPTTYKPLSGPSVTTNQYSVTEHLKHVEPGSGRGLPGVYLYYELSTITASIEELRPGLLKFLTSVCAIVGGLYTVLGLIDHVITAV 413
            G++ + +RLD +  PKA+   F + T  GA +S  A +L  VL A EL + ++ R    +EVD                        +G    + FD+ FP +AC  + + A D +GA Q  V H+V K RLD  G       ++E+G TI  +  LL +           ++ KD  A            CG CYGAG PG+CC  C+EV+D YRK GW+F P  V QCR  GFV        + AA   EGC + GYL++ +  GN HFAP     +A +         +L  T   FN THTI+KL FG+  PG   PL+G S+ + +   GM+QYY  VVPTTY    G  V TNQYSVTEH + ++P +  GLPGV+++YELS I AS+ E     L FLT VCAIVGG++TVLGL+D  +  +
Sbjct:   39 GLLDKIRRLDAF--PKAQDDGFWERTNAGAAVSVCAVVLMLVLFASELSHFLSTRVVERMEVDGDVGLGGANFAEGTEVAEAAGASVSGDNIAIHFDVTFPSMACAVVGLDAMDLSGAQQLEVAHNVYKRRLDGNGRPFGVSEKNELGKTITTKEQLLAQXXXXXXXXXAEETDKDRAAVEADEGKQRNADCGSCYGAGAPGQCCSKCEEVRDLYRKKGWAFHPSTVAQCRQEGFVE-------DVAATDGEGCNIYGYLEVPRVAGNFHFAPGHSFQSAAS-----HVHDLLSYTVGQFNLTHTINKLSFGQEYPGQRNPLDGYSKALPEGQTGMFQYYTTVVPTTYVHGDGRVVKTNQYSVTEHFQRLQPETTEGLPGVFVFYELSPIRASLREEARSFLHFLTRVCAIVGGVFTVLGLVDQAVHGI 453          
BLAST of jgi.p|Trimin1|351370 vs. uniprot
Match: A0A1E7FEK4_9STRA (DUF1692-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEK4_9STRA)

HSP 1 Score: 262 bits (670), Expect = 2.680e-80
Identity = 161/407 (39.56%), Postives = 223/407 (54.79%), Query Frame = 0
Query:   18 GIMARAKRLDFYGAPKAEFRKGTVHGALMSAVAFLLACVLIARELQYSMAVRTTTNLEVDSRFDPAGRRTNVTFDIKFPRIACDHISISAEDNNGAPQH---NVQHHVTK--IRLDSQGYMLDAGSRH--EVGDTIKDETA-----LLGREGEAAARKSLADSAKDAPAQGGCGDCYGAGEPGECCDTCDEVKDKYRKMGWSF-SPDEVPQCRPGFVPGAVAAKPEAAAPPREGCYLSGYLDLSKARGNVHFAPSSKAGAAVAGGAGDTAGAMLLRTFAAFNTTHTIDKLRFGENAPGMVYPLEGESRVIRDSYGMYQYYIKVVPTTYKPLSGPSVTTNQYSVTEHLKHVEPGSGRGLPGVYLYYELSTITASI-EELRPGLLKFLTSVCAIVGGLYTVLGLIDHVI 410
            G     ++ D + +   EFR  T HGA++S V  +    L+  E+ Y+  +  T  + V++   P G   +V FDI  P + C  + I A D +G  Q    + +HHV K  I++D +G +   G +   E G T+K+E        + +E      K + D  ++      CG C+GAGE GECCDTCD+VK  Y + GW   +PDE+ QCR          K        EGC + G + L    G+ H AP  +   A+      +   MLL TF  FN THT+ K+RFG+  PG    L+G +RVI D YGMYQYY K+VPT  K  +G S+ TNQYSVTEHL+HV PG GRGLPGV+ +YE+S +   I E+ R G L F TSVCAIVGG+ T +GL+D ++
Sbjct:    2 GFQENLRKFDNHSSVSKEFRVYTFHGAVLSVVTVIAITYLVFTEMGYNFKLIMTERVHVNAT-SPTG--LDVEFDISLPLVPCSVLKIDANDPSGQTQSLHLDQRHHVWKHRIKVDDEGEIEFLGDKRKLEQGSTLKEEHLEELFDTMNKE------KGVTDDEEEKTVD--CGSCFGAGEEGECCDTCDDVKRAYTRKGWHIQNPDEIDQCR--------KEKKNVKEDEGEGCNVHGLVALDSGGGSFHLAPGREMDHAMDPSDIGSIFEMLLSTFEQFNMTHTVHKIRFGDAFPGNKNQLDGVNRVIADGYGMYQYYFKIVPTLVKFKNGTSIQTNQYSVTEHLRHVNPGGGRGLPGVFFFYEISPLHVEIVEDYRKGYLGFFTSVCAIVGGVVTTMGLLDQIL 389          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351370 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C905_9STRA3.850e-310100.00Endoplasmic reticulum vesicle transporter-domain-c... [more]
A0A7S3H281_9STRA2.590e-8741.95Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2W0R9_9STRA1.210e-8640.84Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7TMC0_9STRA4.580e-8538.95Endoplasmic reticulum-golgi intermediate compartme... [more]
A0A7S4IKK9_9STRA1.400e-8438.61Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
D7FL32_ECTSI2.490e-8438.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3PYC5_9STRA8.820e-8238.26Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A482SKL0_9ARCH1.110e-8142.86Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S1CIR7_9STRA1.860e-8038.93Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A1E7FEK4_9STRA2.680e-8039.56DUF1692-domain-containing protein n=1 Tax=Fragilar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012936Endoplasmic reticulum vesicle transporter, C-terminalPFAMPF07970COPIIcoated_ERVcoord: 181..407
e-value: 7.3E-59
score: 199.4
IPR039542Endoplasmic reticulum vesicle transporter, N-terminalPFAMPF13850ERGIC_Ncoord: 24..113
e-value: 3.1E-15
score: 56.2
IPR045888Endoplasmic reticulum vesicle transporterPANTHERPTHR10984ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEINcoord: 21..415

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_88contigContig_88:543698..545995 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351370mRNA_11075Tribonema minus UTEX_B_3156 mRNAContig_88 543562..545995 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351370|estExt_Genemark1.C_Ctg_880065 ID=Trimin1|351370|estExt_Genemark1.C_Ctg_880065|Name=jgi.p|Trimin1|351370|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=427bp
MSLSSIASFATDTIKDEGIMARAKRLDFYGAPKAEFRKGTVHGALMSAVA
FLLACVLIARELQYSMAVRTTTNLEVDSRFDPAGRRTNVTFDIKFPRIAC
DHISISAEDNNGAPQHNVQHHVTKIRLDSQGYMLDAGSRHEVGDTIKDET
ALLGREGEAAARKSLADSAKDAPAQGGCGDCYGAGEPGECCDTCDEVKDK
YRKMGWSFSPDEVPQCRPGFVPGAVAAKPEAAAPPREGCYLSGYLDLSKA
RGNVHFAPSSKAGAAVAGGAGDTAGAMLLRTFAAFNTTHTIDKLRFGENA
PGMVYPLEGESRVIRDSYGMYQYYIKVVPTTYKPLSGPSVTTNQYSVTEH
LKHVEPGSGRGLPGVYLYYELSTITASIEELRPGLLKFLTSVCAIVGGLY
TVLGLIDHVITAVRKTHGLCHMRRCV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012936Erv_C
IPR039542Erv_N
IPR045888Erv