mRNA_11075 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|351370 vs. uniprot
Match: A0A836C905_9STRA (Endoplasmic reticulum vesicle transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C905_9STRA) HSP 1 Score: 846 bits (2185), Expect = 4.730e-309 Identity = 426/426 (100.00%), Postives = 426/426 (100.00%), Query Frame = 1 Query: 1 MSLSSIASFATDTIKDEGIMARAKRLDFYGAPKAEFRKGTVHGALMSAVAFLLACVLIARELQYSMAVRTTTNLEVDSRFDPAGRRTNVTFDIKFPRIACDHISISAEDNNGAPQHNVQHHVTKIRLDSQGYMLDAGSRHEVGDTIKDETALLGREGEAAARKSLADSAKDAPAQGGCGDCYGAGEPGECCDTCDEVKDKYRKMGWSFSPDEVPQCRPGFVPGAVAAKPEAAAPPREGCYLSGYLDLSKARGNVHFAPSSKAGAAVAGGAGDTAGAMLLRTFAAFNTTHTIDKLRFGENAPGMVYPLEGESRVIRDSYGMYQYYIKVVPTTYKPLSGPSVTTNQYSVTEHLKHVEPGSGRGLPGVYLYYELSTITASIEELRPGLLKFLTSVCAIVGGLYTVLGLIDHVITAVRKTHGLCHMRRCV 1278 MSLSSIASFATDTIKDEGIMARAKRLDFYGAPKAEFRKGTVHGALMSAVAFLLACVLIARELQYSMAVRTTTNLEVDSRFDPAGRRTNVTFDIKFPRIACDHISISAEDNNGAPQHNVQHHVTKIRLDSQGYMLDAGSRHEVGDTIKDETALLGREGEAAARKSLADSAKDAPAQGGCGDCYGAGEPGECCDTCDEVKDKYRKMGWSFSPDEVPQCRPGFVPGAVAAKPEAAAPPREGCYLSGYLDLSKARGNVHFAPSSKAGAAVAGGAGDTAGAMLLRTFAAFNTTHTIDKLRFGENAPGMVYPLEGESRVIRDSYGMYQYYIKVVPTTYKPLSGPSVTTNQYSVTEHLKHVEPGSGRGLPGVYLYYELSTITASIEELRPGLLKFLTSVCAIVGGLYTVLGLIDHVITAVRKTHGLCHMRRCV Sbjct: 1 MSLSSIASFATDTIKDEGIMARAKRLDFYGAPKAEFRKGTVHGALMSAVAFLLACVLIARELQYSMAVRTTTNLEVDSRFDPAGRRTNVTFDIKFPRIACDHISISAEDNNGAPQHNVQHHVTKIRLDSQGYMLDAGSRHEVGDTIKDETALLGREGEAAARKSLADSAKDAPAQGGCGDCYGAGEPGECCDTCDEVKDKYRKMGWSFSPDEVPQCRPGFVPGAVAAKPEAAAPPREGCYLSGYLDLSKARGNVHFAPSSKAGAAVAGGAGDTAGAMLLRTFAAFNTTHTIDKLRFGENAPGMVYPLEGESRVIRDSYGMYQYYIKVVPTTYKPLSGPSVTTNQYSVTEHLKHVEPGSGRGLPGVYLYYELSTITASIEELRPGLLKFLTSVCAIVGGLYTVLGLIDHVITAVRKTHGLCHMRRCV 426
BLAST of jgi.p|Trimin1|351370 vs. uniprot
Match: A0A7S3H281_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H281_9STRA) HSP 1 Score: 281 bits (718), Expect = 1.040e-86 Identity = 172/410 (41.95%), Postives = 232/410 (56.59%), Query Frame = 1 Query: 70 KRLDFYGAPKAEFRKGTVHGALMSAVAFLLACVLIARELQYSMAVRTTTNLEVDSRFDPAGRRTN---VTFDIKFPRIACDHISISAEDNNGAPQHNVQHHVTKIRLDSQGYMLDAGSRHEVGDTIKDETALLGREGEAAARKSLADSAKDAPAQ----GGCGDCYGAGEPGECCDTCDEVKDKYRKMGWSFSPDEVPQCRPGFVPGAVAAKPEAAAPPREGCYLSGYLDLSKARGNVHFAPSSK----AGAAVAGGAGDTAGAMLLR-----TFAAFNTTHTIDKLRFGENAPGMVYPLEGESRVIRDSYGMYQYYIKVVPTTYKPL-SGPSVTTNQYSVTEHLKHVEPGSGRGLPGVYLYYELSTITASIEELRPGLLKFLTSVCAIVGGLYTVLGLIDHVITAVRKT 1248 K++D + +FR T GAL+S ++ ++ L E+ Y + T +L V+ G RTN V FDI F I C+ +S+ A D+ G PQ + H + K +L G R E+G+T++ E L E + AD K G CG+CYGAG PG+CC TC +VK Y+++GW F P + QC A A GC L G LDL++ G+ H AP K AG A +G G AG L TF FN +HTI+ L FG+N PG+ PL+GE+R ++D++GMYQYYIKVVPT YK L S + +NQY+VTEH+ H+ PGSGRGLPGVY +YE+S I A EE R G+L F+TS CAIVGG ++V+GL+D + AV KT Sbjct: 16 KKIDAFPKAFDDFRVKTTTGALVSIISIIIMATLFFSEMSYFLKTETVDHLYVN------GTRTNKLHVDFDISFHDIPCNLLSVDAMDDTGVPQKDAVHEIYKHKLSVAGEKQGFPERQELGNTVRTEAEL-----EDLVKSQSADLVKQGAILKEQIGACGNCYGAGSPGQCCQTCLDVKQAYQRVGWRFKPHGIIQC----TSEAFMANMNEQFAEDGGCQLYGSLDLNRGSGHFHIAPHKKLHQPAGDA-SGRPGQNAGLFNLMDLISFTFDQFNVSHTINTLSFGDNFPGIKSPLDGETRGVQDTHGMYQYYIKVVPTRYKALYSTTEIQSNQYAVTEHMSHLAPGSGRGLPGVYFHYEVSPIQALFEEKRGGMLGFITSCCAIVGGAFSVMGLVDVFLGAVLKT 409
BLAST of jgi.p|Trimin1|351370 vs. uniprot
Match: A0A7S2W0R9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0R9_9STRA) HSP 1 Score: 278 bits (710), Expect = 6.870e-86 Identity = 165/404 (40.84%), Postives = 224/404 (55.45%), Query Frame = 1 Query: 55 IMARAKRLDFYGAPKAEFRKGTVHGALMSAVAFLLACVLIARELQYSMAVRTTTNLEVDSRFDPAGRRTNVTFDIKFPRIACDHISISAEDNNGAPQHNVQHHVTKIRLDSQGYMLDAGSRHEVGDTIKDETALLGREGEAAARKSLADSAKDAPAQGGCGDCYGA-GEPGECCDTCDEVKDKYRKMGWSFSPDEVPQCRPGFVPGAVAAKPEAAAPPREGCYLSGYLDLSKARGNVHFAPSSKAGAAVAGGAGDTAGAMLLRTFAAFNTTHTIDKLRFGENAPGMVYPLEGESRVIRDSYGMYQYYIKVVPTTYKPLSG--PSVTTNQYSVTEHLKHVEPGSGRGLPGVYLYYELSTITASIEELRPGLLKFLTSVCAIVGGLYTVLGLIDHVI-TAVRKTHG 1254 +M + LD + EFR T HGA+ S VA + L E Y V L V+S V FDIKF I CD +S+ A D +G Q + H+V K +LD++G D RH T++ E L D + CG+CYGA +P CC+TC+EV+ Y GW+F PDE+ QC+P V ++ + E EGC + G ++L+K GN HFAP AA G + M L T+ +FN +H I L FG + PG+ PL+ +SR + D GMYQYY+KVVPTTYK L+ + +NQYSVTEHL+HV PGSGRGLPGV+ +YE+S + A+ EE R G L+F+ SVCAI+GG++T++GL D V+ A K G Sbjct: 8 VMDTLRSLDAFPKHGEEFRVRTTHGAMASVVAIVAMLYLFVSEFYYYSRVEVVDRLVVNSSHADT---LKVRFDIKFHHIPCDLLSLDAMDTSGQRQEELVHNVFKRKLDAEGNKADRPERHRELGTLQHEHQL-----------------SDPGEKPACGNCYGARDDPDACCNTCEEVRIAYEDKGWAFHPDEIEQCQPAKVLSSIDPETE------EGCNIFGNVELTKLSGNFHFAPGEHLQAAARSGQMSFSDLMSL-TYKSFNISHDIRTLAFGNHFPGIQNPLDRQSRSVSDGSGMYQYYVKVVPTTYKFLNRRRKDLVSNQYSVTEHLRHVTPGSGRGLPGVWFFYEVSPVQATFEETRQGTLEFIASVCAILGGVFTIIGLADRVVGVAFEKLRG 384
BLAST of jgi.p|Trimin1|351370 vs. uniprot
Match: W7TMC0_9STRA (Endoplasmic reticulum-golgi intermediate compartment protein 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMC0_9STRA) HSP 1 Score: 275 bits (704), Expect = 1.830e-84 Identity = 164/421 (38.95%), Postives = 225/421 (53.44%), Query Frame = 1 Query: 43 KDEGIMARAKRLDFYGAPKAEFRKGTVHGALMSAVAFLLACVLIARELQYSMAVRTTTNLEVDSRFDPAGRRTNVTFDIKFPRIACDHISISAEDNNGAPQHNVQHHVTKIRLDSQGYMLDAGSRHEVGDTIKDETALLGREGEAAARKSLADSAKDAPAQGG--------------------CGDCYGAGEPGECCDTCDEVKDKYRKMGWSFSPDEVPQCRPGFVPGAVAAKPEAAAPPREGCYLSGYLDLSKARGNVHFAPSSKAGAAVAGGAGDTAGAMLLRTFAAFNTTHTIDKLRFGENAPGMVYPLEGESRVIRDSYGMYQYYIKVVPTTYKPLSGPSVTTNQYSVTEHLKHVEPGSGRGLPGVYLYYELSTITASIEELRPGLLKFLTSVCAIVGGLYTVLGLIDHVITAVRK 1245 KD + R +RLD++ K +F+ T +G S VA L EL+YSM ++ V+S D R F++ FP ++C +S A D G Q V+ HV K RLDS G + A + H++GDT +E LL E ++ A+ + + G CGDCYGAGEPG+CC+TC EVK Y GW+F V QC+ + + E EGC + G L L+ GNVHFAP + + A D ++ TF FN +H I L GE PG PL + R + D YGMYQYY+KVVPT YK LS P +NQY+V+EH++H+ PGS RGLPGV+ +Y+ S + +E R GLL FLTSVCAIVGG+++V G++D V+ + K Sbjct: 9 KDLTLYERLRRLDYHPKTKDDFKVRTAYGGATSVVALACMIFLFFTELKYSMEKEIVDHMYVNSSRDT---RLLFNFNLTFPSVSCSLLSADALDPLGNKQEGVESHVFKTRLDSMGNPIAAKTWHKLGDTFTEEDLLLKHEEDSRAQLEXXXXXXEKLGEEGDGQQVGEDGKPRGRNLKRRKCGDCYGAGEPGQCCNTCAEVKQAYDSKGWAFIGLNVEQCKQENLQVSFGDGAE------EGCNIHGSLLLTHDSGNVHFAPGEQLRQSGALNVAD----LVTFTFLQFNVSHEIHHLSLGEEFPGFRSPLSNQKRSVADGYGMYQYYLKVVPTIYKHLSQPPTVSNQYAVSEHIRHINPGSNRGLPGVWFFYDTSPVHVEFQERRKGLLPFLTSVCAIVGGVFSVFGVVDGVVHNLMK 416
BLAST of jgi.p|Trimin1|351370 vs. uniprot
Match: A0A7S4IKK9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IKK9_9STRA) HSP 1 Score: 274 bits (700), Expect = 7.860e-84 Identity = 161/417 (38.61%), Postives = 232/417 (55.64%), Query Frame = 1 Query: 52 GIMARAKRLDFYGAPKAEFRKGTVHGALMSAVAFLLACVLIARELQYSMAVRTTTNLEVDSRFDPAGRRTNVTFDIKFPRIACDHISISAEDNNGAPQH---NVQHHVTKIRLDSQGYMLDAGSRHEVGDTIKDETAL-------LGREGEAAARKSLADSAKDAPAQGGCGDCYGAGEPGECCDTCDEVKDKYRKMGWSFSPDEVPQCRPGFVPGAVAAKPEAAAPPREGCYLSGYLDLSKARGNVHFAPSSKAGAAVAGGAGDTAGAMLLRT------FAAFNTTHTIDKLRFGENAPGMVYPLEGESRVIRDSYGMYQYYIKVVPTTYKPLSGPSVTTNQYSVTEHLKHVEPGSGRGLPGVYLYYELSTITASIEELRPGLLKFLTSVCAIVGGLYTVLGLIDHVITAVRKTHG 1254 G R + LD + AEFR T+ GAL+S L L+ E + + V++ PAG + FDI F + C +++ A+D G Q + H V K R++ G M+ S+ E+G T DE +L LG E E ++ + +A D+ + CGDCYGAGE GECC+TCD+VK Y++ W +V QCR ++A EGC + G + LS GN+H AP G G A + T F FN +HT++++RFG+ PG ++ L+G+ R++ D YGMYQYY++VVPT Y+ L G + TNQYSVTEH++HV PGSGRGLPGV+++YE+S + +EE R G ++FLTSVCA VGG++TV+G+ D I A ++ G Sbjct: 30 GFAERLRSLDAHTPAAAEFRVRTIQGALLSVFTLLSIAYLVRIEYGFHFLTEVLDRVHVNAT-TPAG--LEMEFDITFHSVPCALLNVDAQDPTGQSQSLHLDRTHRVFKHRINKNGKMIGRKSKFELGGTFADERSLRDMGKEELGLEDE---KEEVEGTASDSSDEDECGDCYGAGEEGECCNTCDDVKRAYQRRSWHIDLAKVKQCRKDV---------KSADEEGEGCNVHGTVALSTGGGNLHLAPGR--GLEKFGKEKQDADFVTSLTEFIEEAFETFNVSHTVNRIRFGQEYPGDLHQLDGQKRIVEDDYGMYQYYVQVVPTVYRKLDGTEIATNQYSVTEHMRHVTPGSGRGLPGVFIFYEVSALHVEMEEYRRGWIRFLTSVCAAVGGVFTVMGMADRAIFARSRSTG 429
BLAST of jgi.p|Trimin1|351370 vs. uniprot
Match: D7FL32_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL32_ECTSI) HSP 1 Score: 274 bits (701), Expect = 9.890e-84 Identity = 164/424 (38.68%), Postives = 238/424 (56.13%), Query Frame = 1 Query: 58 MARAKRLDFYGAPKAEFRKGTVHGALMSAVAFLLACVLIARELQYSMAVRTTTNLEVDSRFDPAGRRTNVTFDIKFPRIACDHISISAEDNNGAPQHNVQHHVTKIRLDSQGYMLDAGSRHEVGDTIKDETALLGREGEA--------------------------AARKSLADSAKDAPAQGGCGDCYGAGEPGECCDTCDEVKDKYRKMGWSFSPDEVPQCRPGFVPGAVAAKPEAAAPPREGCYLSGYLDLSKARGNVHFAPSSKAGAAVAGGAGDTAGAMLLRT-FAAFNTTHTIDKLRFGENAP-GMVYP--------LEGESRVIRDSYGMYQYYIKVVPTTYKPLSGPSVTTNQYSVTEHLKHVEPGSGRGLPGVYLYYELSTITASIEELRPGLLKFLTSVCAIVGGLYTVLGLID 1221 + + KRLD Y PK EF++ TVHGA+++ V VL REL +SM T NL V+S + F RI C +S+ AED G PQ +++H VT+ RLDS G LD G +HE+G+T+K A++ +E E +++L D+A + C +CYGAG GECC TC++V+ YR+ GW +P E+P C + A E+ EGC L+G+L++S+ GN HFAP + + A + + ++ +FNTTHTI+ L FG+ P G P LEG + ++D++ M+QY++++VPT Y+ +G +V +NQYS TEHLKHV G+ RGLPGVY YYE+S + A +EE R G L FLT C +VGG+YT+LGL++ Sbjct: 26 LRKLKRLDIYSRPKREFQRATVHGAMVTIVLVGAVLVLTWRELVFSMKRETVENLFVNSTIXXXXXXXXX---VVFARIPCGFLSLDAEDALGIPQEDLRHDVTRTRLDSIGRALDDGEKHEMGNTLK---AVIAKEEEKXXXXXXXXXXXXXXXXXXXXXXXXXXVEQRALEDTATTGQ-EDEC-NCYGAGAEGECCRTCEDVRKAYRRKGWRLNPAEIPACAGEALSANSANTMESPPVENEGCRLAGHLEVSRTEGNFHFAPGHR----LHRHANELSFVDRIQVALESFNTTHTINTLTFGDQPPPGHASPKHAVASTVLEGHQKTVQDTHAMHQYFLQLVPTVYRLDNGETVHSNQYSATEHLKHVHDGTSRGLPGVYFYYEVSPVQALVEEKRKGFLAFLTGACGVVGGVYTILGLVN 437
BLAST of jgi.p|Trimin1|351370 vs. uniprot
Match: A0A7S3PYC5_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYC5_9STRA) HSP 1 Score: 266 bits (680), Expect = 3.440e-81 Identity = 158/413 (38.26%), Postives = 231/413 (55.93%), Query Frame = 1 Query: 46 DEGIMARAKRLDFYGAPKAEFRKGTVHGALMSAVAFLLACVLIARELQYSMAVRTTTNLEVDSRFDPAGRRTNVTFDIKFPRIACDHISISAEDNNGAPQH---NVQHHVTKIRLDSQGYMLDAGSRHEVGDTIKDETALLGREGEAAARKSL--ADSAKDAPAQGGCGDCYGAGEPGECCDTCDEVKDKYRKMGWSFSPD-EVPQCRPGFVPGAVAAKPEAAAPPREGCYLSGYLDLSKARGNVHFAPSSKAGAAVAGGAGDTAGAMLL---------RTFAAFNTTHTIDKLRFGENAPGMVYPLEGESRVIRDSYGMYQYYIKVVPTTYKPLSGPSVTTNQYSVTEHLKHVEPGSGRGLPGVYLYYELSTITASIEELRPGLLKFLTSVCAIVGGLYTVLGLIDHVITAV 1239 ++ + R K D++ +EFR T +GAL+S LL LI E QY++ + V++ PAG + FD+ FP +AC +++ A D G PQ + H V K R+D G+ + S+ E+G+T + E + GE A + + A D CG CYGAG+ ECC+TCD+VK Y++ GW F D +V QC+ + + EGC + G + LS GN+H AP + G +L + F F+ +H ++KLRFG+ PG + L+GE R+I D+YGMYQYYIK+VPT YK L+G +V TNQYSVTEH++HV PGS RGLPG++ YYE+S + I E R G ++FLTSV A+VGG+++ + L+D+ I +V Sbjct: 9 EKTVSQRLKNFDYHTTVASEFRVKTSNGALLSVATLLLILYLILTEFQYNLTPSLRERVHVNAT-TPAG--IEMEFDVTFPNVACALVNVDAGDPLGQPQSMHIDRTHRVFKHRMDKNGHFVGKKSKFELGNTFQAEEHI----GEYAEKTDMEFAKDEDDYYYDKECGSCYGAGDQDECCNTCDDVKRAYQRKGWLFPKDLDVKQCK---------QQKNSHDMEGEGCNVHGVVALSSGGGNLHLAPGHDM---------ENFGKQVLFSSLEDFINQAFETFDVSHKVNKLRFGKTYPGEYHQLDGEERMIEDAYGMYQYYIKIVPTVYKFLNGTTVETNQYSVTEHMRHVSPGSSRGLPGIFFYYEVSALHVEIVEYRQGWIRFLTSVAAVVGGVFSTMSLLDNYIFSV 396
BLAST of jgi.p|Trimin1|351370 vs. uniprot
Match: A0A482SKL0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SKL0_9ARCH) HSP 1 Score: 265 bits (677), Expect = 4.330e-81 Identity = 147/343 (42.86%), Postives = 209/343 (60.93%), Query Frame = 1 Query: 214 TNLEVDSRFDPAGRRTNVT--FDIKFPRIACDHISISAEDNNGAPQHNVQHHVTKIRLDSQGYMLDAGSRHEVGDTIKDETALLGREGEAAARKSLADSAKDAPAQGGCGDCYGAGEPGECCDTCDEVKDKYRKMGWSFSPDEVPQCRPGFVPGAVAAKPEAAAPPREGCYLSGYLDLSKARGNVHFAPSSKAGAAVAGGAGDTAGAMLLRTFAAFNTTHTIDKLRFGENAPGMVYPLEGESRVIRDSYGMYQYYIKVVPTTYKPLSGPSVTTNQYSVTEHLKHVEPGSGRGLPGVYLYYELSTITASIEELRPGLLKFLTSVCAIVGGLYTVLGLIDHVITA 1236 T ++VD F R + +T FD+ F I+C +++ A D+ G Q + H + K RL +G + + + ++G T+ +E L E A+++L K A G CG CYGAG PG+CC+TC +VKD Y ++GW F V QC ++ E A GC + G L LSK G+ H AP+ K A G ++ TF FN TH+++ L FG++ PG+ PL+G+ R+++D++GMYQY+IKVVPT YKPL+ P V +NQYSVTEH+ + PGSGRGLPGVY YYE+S I A IEE + + FLTSVCAIVGG YTV+GL+D ++++ Sbjct: 38 TQMKVDHLFVNTTRASQLTIDFDLSFTSISCSMLAVDAFDDRGMSQVDAVHEIYKHRLSPEGEKVGSAEQADLGHTLLNEAQL-----ENIAKETLEMKEKAKEAIGVCGKCYGAGRPGQCCNTCQDVKDAYERLGWHFKAQGVVQCS---TEAYISTLREQYAEDG-GCQVYGRLHLSKTSGHFHIAPTKKVHEKQANGGMFNILDLISFTFDQFNVTHSVNALSFGDHFPGINSPLDGQHRLVKDTHGMYQYFIKVVPTRYKPLNKPEVQSNQYSVTEHMSTLAPGSGRGLPGVYFYYEVSPIQAFIEEKKRSWMHFLTSVCAIVGGAYTVMGLLDILLSS 371
BLAST of jgi.p|Trimin1|351370 vs. uniprot
Match: A0A7S1CIR7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CIR7_9STRA) HSP 1 Score: 265 bits (676), Expect = 7.230e-80 Identity = 167/429 (38.93%), Postives = 227/429 (52.91%), Query Frame = 1 Query: 52 GIMARAKRLDFYGAPKAE---FRKGTVHGALMSAVAFLLACVLIARELQYSMAVRTTTNLEVDSRF-------------------DPAGRRTNVTFDIKFPRIACDHISISAEDNNGAPQHNVQHHVTKIRLDSQGYMLDAGSRHEVGDTIKDETALLGREGEAAARKSLADSAKDAPA---------QGGCGDCYGAGEPGECCDTCDEVKDKYRKMGWSFSPDEVPQCRP-GFVPGAVAAKPEAAAPPREGCYLSGYLDLSKARGNVHFAPSSKAGAAVAGGAGDTAGAMLLRTFAAFNTTHTIDKLRFGENAPGMVYPLEGESRVIRDSY-GMYQYYIKVVPTTYKPLSGPSVTTNQYSVTEHLKHVEPGSGRGLPGVYLYYELSTITASIEELRPGLLKFLTSVCAIVGGLYTVLGLIDHVITAV 1239 G++ + +RLD + PKA+ F + T GA +S A +L VL A EL + ++ R +EVD +G + FD+ FP +AC + + A D +GA Q V H+V K RLD G ++E+G TI + LL + ++ KD A CG CYGAG PG+CC C+EV+D YRK GW+F P V QCR GFV + AA EGC + GYL++ + GN HFAP +A + +L T FN THTI+KL FG+ PG PL+G S+ + + GM+QYY VVPTTY G V TNQYSVTEH + ++P + GLPGV+++YELS I AS+ E L FLT VCAIVGG++TVLGL+D + + Sbjct: 39 GLLDKIRRLDAF--PKAQDDGFWERTNAGAAVSVCAVVLMLVLFASELSHFLSTRVVERMEVDGDVGLGGANFAEGTEVAEAAGASVSGDNIAIHFDVTFPSMACAVVGLDAMDLSGAQQLEVAHNVYKRRLDGNGRPFGVSEKNELGKTITTKEQLLAQXXXXXXXXXAEETDKDRAAVEADEGKQRNADCGSCYGAGAPGQCCSKCEEVRDLYRKKGWAFHPSTVAQCRQEGFVE-------DVAATDGEGCNIYGYLEVPRVAGNFHFAPGHSFQSAAS-----HVHDLLSYTVGQFNLTHTINKLSFGQEYPGQRNPLDGYSKALPEGQTGMFQYYTTVVPTTYVHGDGRVVKTNQYSVTEHFQRLQPETTEGLPGVFVFYELSPIRASLREEARSFLHFLTRVCAIVGGVFTVLGLVDQAVHGI 453
BLAST of jgi.p|Trimin1|351370 vs. uniprot
Match: A0A1E7FEK4_9STRA (DUF1692-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEK4_9STRA) HSP 1 Score: 262 bits (670), Expect = 1.030e-79 Identity = 161/407 (39.56%), Postives = 223/407 (54.79%), Query Frame = 1 Query: 52 GIMARAKRLDFYGAPKAEFRKGTVHGALMSAVAFLLACVLIARELQYSMAVRTTTNLEVDSRFDPAGRRTNVTFDIKFPRIACDHISISAEDNNGAPQH---NVQHHVTK--IRLDSQGYMLDAGSRH--EVGDTIKDETA-----LLGREGEAAARKSLADSAKDAPAQGGCGDCYGAGEPGECCDTCDEVKDKYRKMGWSF-SPDEVPQCRPGFVPGAVAAKPEAAAPPREGCYLSGYLDLSKARGNVHFAPSSKAGAAVAGGAGDTAGAMLLRTFAAFNTTHTIDKLRFGENAPGMVYPLEGESRVIRDSYGMYQYYIKVVPTTYKPLSGPSVTTNQYSVTEHLKHVEPGSGRGLPGVYLYYELSTITASI-EELRPGLLKFLTSVCAIVGGLYTVLGLIDHVI 1230 G ++ D + + EFR T HGA++S V + L+ E+ Y+ + T + V++ P G +V FDI P + C + I A D +G Q + +HHV K I++D +G + G + E G T+K+E + +E K + D ++ CG C+GAGE GECCDTCD+VK Y + GW +PDE+ QCR K EGC + G + L G+ H AP + A+ + MLL TF FN THT+ K+RFG+ PG L+G +RVI D YGMYQYY K+VPT K +G S+ TNQYSVTEHL+HV PG GRGLPGV+ +YE+S + I E+ R G L F TSVCAIVGG+ T +GL+D ++ Sbjct: 2 GFQENLRKFDNHSSVSKEFRVYTFHGAVLSVVTVIAITYLVFTEMGYNFKLIMTERVHVNAT-SPTG--LDVEFDISLPLVPCSVLKIDANDPSGQTQSLHLDQRHHVWKHRIKVDDEGEIEFLGDKRKLEQGSTLKEEHLEELFDTMNKE------KGVTDDEEEKTVD--CGSCFGAGEEGECCDTCDDVKRAYTRKGWHIQNPDEIDQCR--------KEKKNVKEDEGEGCNVHGLVALDSGGGSFHLAPGREMDHAMDPSDIGSIFEMLLSTFEQFNMTHTVHKIRFGDAFPGNKNQLDGVNRVIADGYGMYQYYFKIVPTLVKFKNGTSIQTNQYSVTEHLRHVNPGGGRGLPGVFFFYEISPLHVEIVEDYRKGYLGFFTSVCAIVGGVVTTMGLLDQIL 389 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351370 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11075 ID=mRNA_11075|Name=jgi.p|Trimin1|351370|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1417bp|location=Sequence derived from alignment at Contig_88:543562..545995- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAGCTTGAGCAGCATCGCCAGCTTTGCCACGGATACAATCAAGGATGAback to top protein sequence of jgi.p|Trimin1|351370 >Trimin1|351370|estExt_Genemark1.C_Ctg_880065 ID=Trimin1|351370|estExt_Genemark1.C_Ctg_880065|Name=jgi.p|Trimin1|351370|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=427bp MSLSSIASFATDTIKDEGIMARAKRLDFYGAPKAEFRKGTVHGALMSAVAback to top mRNA from alignment at Contig_88:543562..545995- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11075 ID=mRNA_11075|Name=jgi.p|Trimin1|351370|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2434bp|location=Sequence derived from alignment at Contig_88:543562..545995- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_88:543562..545995- >mRNA_11075 ID=mRNA_11075|Name=jgi.p|Trimin1|351370|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1281bp|location=Sequence derived from alignment at Contig_88:543562..545995- (Tribonema minus UTEX_B_3156 )back to top |