Trimin1|351292|estExt_Genemark1.C_Ctg_860032 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|351292
Unique Name	Trimin1\|351292\|estExt_Genemark1.C_Ctg_860032
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	500

Homology

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BLAST of jgi.p|Trimin1|351292 vs. uniprot
Match: A0A836C8P2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8P2_9STRA)

HSP 1 Score: 872 bits (2253), Expect = 0.000e+0
Identity = 477/477 (100.00%), Postives = 477/477 (100.00%), Query Frame = 0

Query:    1 MGRRLQGLAWKDLLLLLTCWAWADAAACGVGSVACGTCDEAGCTSNANSATWAVSCCPHIILRSGRRCDLWSKGPCIGDAEAQLQGVQSTPAGAPLAAPEQGLGQRELDGVQEGHGSGGGGGEREWGQEASXXXXXXXXXXRALNRLDVPAALWMITSNAAQVWSGNFDGTTASFTCNYDACSISDLAPFGFDANTLSSARAGKCYALEIYDTAQQASPPLFSLRAGHEVSFARKQGAPFDDKAGSLRMVRRSGVAGCASPAGDQGVGFETEGGGGSAPKWQCGDYNLMCQYSCDCGGGCTCVAPTPAVRAWVDGINAQRAARGYAPVQWSAADTMTVYAAMLDGSIGCSGAASSKAKVGGSGGGXXXXXXXXXXXXXXXXXXXXXXXGKRPHVLRQLRLDTQRQQQRRRLEVIADEGGYTLETIPDTSAAVDDPSVVDVSVAHTRCTRAVQDLGSDACKQVAVTRRPDPASPTDSS 477
            MGRRLQGLAWKDLLLLLTCWAWADAAACGVGSVACGTCDEAGCTSNANSATWAVSCCPHIILRSGRRCDLWSKGPCIGDAEAQLQGVQSTPAGAPLAAPEQGLGQRELDGVQEGHGSGGGGGEREWGQEASXXXXXXXXXXRALNRLDVPAALWMITSNAAQVWSGNFDGTTASFTCNYDACSISDLAPFGFDANTLSSARAGKCYALEIYDTAQQASPPLFSLRAGHEVSFARKQGAPFDDKAGSLRMVRRSGVAGCASPAGDQGVGFETEGGGGSAPKWQCGDYNLMCQYSCDCGGGCTCVAPTPAVRAWVDGINAQRAARGYAPVQWSAADTMTVYAAMLDGSIGCSGAASSKAKVGGSGGGXXXXXXXXXXXXXXXXXXXXXXXGKRPHVLRQLRLDTQRQQQRRRLEVIADEGGYTLETIPDTSAAVDDPSVVDVSVAHTRCTRAVQDLGSDACKQVAVTRRPDPASPTDSS
Sbjct:    1 MGRRLQGLAWKDLLLLLTCWAWADAAACGVGSVACGTCDEAGCTSNANSATWAVSCCPHIILRSGRRCDLWSKGPCIGDAEAQLQGVQSTPAGAPLAAPEQGLGQRELDGVQEGHGSGGGGGEREWGQEASXXXXXXXXXXRALNRLDVPAALWMITSNAAQVWSGNFDGTTASFTCNYDACSISDLAPFGFDANTLSSARAGKCYALEIYDTAQQASPPLFSLRAGHEVSFARKQGAPFDDKAGSLRMVRRSGVAGCASPAGDQGVGFETEGGGGSAPKWQCGDYNLMCQYSCDCGGGCTCVAPTPAVRAWVDGINAQRAARGYAPVQWSAADTMTVYAAMLDGSIGCSGAASSKAKVGGSGGGXXXXXXXXXXXXXXXXXXXXXXXGKRPHVLRQLRLDTQRQQQRRRLEVIADEGGYTLETIPDTSAAVDDPSVVDVSVAHTRCTRAVQDLGSDACKQVAVTRRPDPASPTDSS 477

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|351292 vs. uniprot

BLAST of jgi.p|Trimin1|351292 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836C8P2_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 464..499
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 394..412
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 364..412
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..35 score: 6.0

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_86	contig	Contig_86:304415..306765 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351292	mRNA_13688	Tribonema minus UTEX_B_3156	mRNA	Contig_86 304415..307075 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|351292|estExt_Genemark1.C_Ctg_860032 ID=Trimin1|351292|estExt_Genemark1.C_Ctg_860032|Name=jgi.p|Trimin1|351292|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=500bp
MGRRLQGLAWKDLLLLLTCWAWADAAACGVGSVACGTCDEAGCTSNANSA
TWAVSCCPHIILRSGRRCDLWSKGPCIGDAEAQLQGVQSTPAGAPLAAPE
QGLGQRELDGVQEGHGSGGGGGEREWGQEASGGEREWGQEARALNRLDVP
AALWMITSNAAQVWSGNFDGTTASFTCNYDACSISDLAPFGFDANTLSSA
RAGKCYALEIYDTAQQASPPLFSLRAGHEVSFARKQGAPFDDKAGSLRMV
RRSGVAGCASPAGDQGVGFETEGGGGSAPKWQCGDYNLMCQYSCDCGGGC
TCVAPTPAVRAWVDGINAQRAARGYAPVQWSAADTMTVYAAMLDGSIGCS
GAASSKAKVGGSGGGGGSGGGGKSGGKAHGKGKAQGKGGKRPHVLRQLRL
DTQRQQQRRRLEVIADEGGYTLETIPDTSAAVDDPSVVDVSVAHTRCTRA
VQDLGSDACKQVAVTRRPDPASPTDSSSNGGGGSGGGGGGGAGAGAGPA*