Trimin1|351290|estExt_Genemark1.C_Ctg_860026 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|351290
Unique Name	Trimin1\|351290\|estExt_Genemark1.C_Ctg_860026
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	403

Homology

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BLAST of jgi.p|Trimin1|351290 vs. uniprot
Match: A0A835YSW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSW3_9STRA)

HSP 1 Score: 617 bits (1591), Expect = 3.740e-220
Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 0

Query:    1 MAELLHDLKDKMKGALHHGKEQATTKGAELQEKAAPAFERATEKAKALTSKKSGATTGEAGDTVTSXXXXXXXXXXXXXGLTEALAGGTVGGYAATGKTPVSPPPESRREFVGGEGGANNDARVWEPVTGEQTREIGTDTSLVRDTEAVAGERSGGISGXXXXXXDSSVGETVTLNSGAKAFVPRIFGNLQRSEQQXXXXXXXXAQQSRDIDFGAAAADAPTREYESSHGYLESSDIVSGGASASQLDRSAVGATPPQQLEPSAYAEPSSTTATSGSAHEPRPYGDYGLVSSAXXXXXXXXXXXXXXXXXDXXXXXPQXXXXXSASLFGNSNQASSFGSLRPSSPVPLGDLGRQEDRLQGSAQSYGGGSGSGAPQSESAAVREAAEQGHIAAAKADALVQAE 402
            MAELLHDLKDKMKGALHHGKEQATTKGAELQEKAAPAFERATEKAKALTSKKSGATTGEAGDTVTSXXXXXXXXXXXXXGLTEALAGGTVGGYAATGKTPVSPPPESRREFVGGEGGANNDARVWEPVTGEQTREIGTDTSLVRDTEAVAGERSGGISGXXXXXXDSSVGETVTLNSGAKAFVPRIFGNLQRSEQQXXXXXXXXAQQSRDIDFGAAAADAPTREYESSHGYLESSDIVSGGASASQLDRSAVGATPPQQLEPSAYAEPSSTTATSGSAHEPRPYGDYGLVSSAXXXXXXXXXXXXXXXXXDXXXXXPQXXXXXSASLFGNSNQASSFGSLRPSSPVPLGDLGRQEDRLQGSAQSYGGGSGSGAPQSESAAVREAAEQGHIAAAKADALVQAE
Sbjct:    1 MAELLHDLKDKMKGALHHGKEQATTKGAELQEKAAPAFERATEKAKALTSKKSGATTGEAGDTVTSXXXXXXXXXXXXXGLTEALAGGTVGGYAATGKTPVSPPPESRREFVGGEGGANNDARVWEPVTGEQTREIGTDTSLVRDTEAVAGERSGGISGXXXXXXDSSVGETVTLNSGAKAFVPRIFGNLQRSEQQXXXXXXXXAQQSRDIDFGAAAADAPTREYESSHGYLESSDIVSGGASASQLDRSAVGATPPQQLEPSAYAEPSSTTATSGSAHEPRPYGDYGLVSSAXXXXXXXXXXXXXXXXXDXXXXXPQXXXXXSASLFGNSNQASSFGSLRPSSPVPLGDLGRQEDRLQGSAQSYGGGSGSGAPQSESAAVREAAEQGHIAAAKADALVQAE 402

[Close]

BLAST of jgi.p|Trimin1|351290 vs. uniprot
Match: A0A835YJV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJV8_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 7.370e-7
Identity = 44/114 (38.60%), Postives = 62/114 (54.39%), Query Frame = 0

Query:   96 TGKTPVSPPPESRREFVGGEG--GANNDARVWEPVTGEQTREIGTDTSLVRDTEAVAGERSGGISGXXXXXX-----------------DSSVGETVTLNSGAKAFVPRIFGNL 190
            T + PVSPP ES R+F+  +   G+++DARVW+PV+ EQ+R + TDTS  RD + +    S  ISG  XXXX                  SS  +  T +  AK F+P + GN+
Sbjct:  172 TAERPVSPPHESSRDFLNTDAAAGSSSDARVWDPVSTEQSRSVNTDTSFGRDHDVLTRGSSSNISGSGXXXXXXFGVYGGEGAQQQDTGSSSEQQHGTSSGAAKRFIPDVIGNM 285

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|351290 vs. uniprot

BLAST of jgi.p|Trimin1|351290 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835YSW3_9STRA	3.740e-220	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YJV8_9STRA	7.370e-7	38.60	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..402
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 309..342
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 357..376
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..83

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_86	contig	Contig_86:244910..247453 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351290	mRNA_13683	Tribonema minus UTEX_B_3156	mRNA	Contig_86 244302..247453 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|351290|estExt_Genemark1.C_Ctg_860026 ID=Trimin1|351290|estExt_Genemark1.C_Ctg_860026|Name=jgi.p|Trimin1|351290|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=403bp
MAELLHDLKDKMKGALHHGKEQATTKGAELQEKAAPAFERATEKAKALTS
KKSGATTGEAGDTVTSGETATEGTTTTSGGLTEALAGGTVGGYAATGKTP
VSPPPESRREFVGGEGGANNDARVWEPVTGEQTREIGTDTSLVRDTEAVA
GERSGGISGGGGGGGDSSVGETVTLNSGAKAFVPRIFGNLQRSEQQQQGG
DSSSAQQSRDIDFGAAAADAPTREYESSHGYLESSDIVSGGASASQLDRS
AVGATPPQQLEPSAYAEPSSTTATSGSAHEPRPYGDYGLVSSAGGGGGGG
GGAGGFFASPDASSSTPQGGAGGSASLFGNSNQASSFGSLRPSSPVPLGD
LGRQEDRLQGSAQSYGGGSGSGAPQSESAAVREAAEQGHIAAAKADALVQ
AE*