Trimin1|351257|estExt_Genemark1.C_Ctg_850010 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351257
Unique NameTrimin1|351257|estExt_Genemark1.C_Ctg_850010
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length544
Homology
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Match: A0A835YII0_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YII0_9STRA)

HSP 1 Score: 985 bits (2547), Expect = 0.000e+0
Identity = 543/543 (100.00%), Postives = 543/543 (100.00%), Query Frame = 0
Query:    1 MTSGADPIECLERVELAPDAQLGTVLRATRAIAAGDVVLRERPLVVSAGYADLMRQAGGGIDMDNATKFLLLGYSHGFAMGDPSAPYGMDLSLLPNEYQERRGLMRLGGFMAPSCAPNCMRSARATPGYMTLVATRAIAAGDAVTRDAARLADTTKACREETLLSRGVACACARCAAPDLAFSLPCPAAAAGRCRGTLAPMLPASSPWPAANPADRAYVDGDELAAWTWQCSRCALRLHGRAMLPRLQPASALSQRLEALDAALPYSDMDARLHAPLTALIADARRELCATHIVVHRALKTLAMLYVCTTVNYDDIAAARLSDDDGSVISSRARVLALAAKTEMDALRVLECTVAGCDCGAECNANHQIIKDGIPYTMNAVKSLQHASAAXXXXXXXXXXXXXXXXXXXXXXXAARCPRLVPHLRRYVPFFAATVGAQSDEALDMAAALGVLPGGDAPLYCANCLAVSAEAAALKSCGRCRCVRYCSAACQRAHYARHHKRVCKRLAALASEHGGXXXXXXAAPMDFSGIVGVEGDSALRIFR 543
            MTSGADPIECLERVELAPDAQLGTVLRATRAIAAGDVVLRERPLVVSAGYADLMRQAGGGIDMDNATKFLLLGYSHGFAMGDPSAPYGMDLSLLPNEYQERRGLMRLGGFMAPSCAPNCMRSARATPGYMTLVATRAIAAGDAVTRDAARLADTTKACREETLLSRGVACACARCAAPDLAFSLPCPAAAAGRCRGTLAPMLPASSPWPAANPADRAYVDGDELAAWTWQCSRCALRLHGRAMLPRLQPASALSQRLEALDAALPYSDMDARLHAPLTALIADARRELCATHIVVHRALKTLAMLYVCTTVNYDDIAAARLSDDDGSVISSRARVLALAAKTEMDALRVLECTVAGCDCGAECNANHQIIKDGIPYTMNAVKSLQHASAAXXXXXXXXXXXXXXXXXXXXXXXAARCPRLVPHLRRYVPFFAATVGAQSDEALDMAAALGVLPGGDAPLYCANCLAVSAEAAALKSCGRCRCVRYCSAACQRAHYARHHKRVCKRLAALASEHGGXXXXXXAAPMDFSGIVGVEGDSALRIFR
Sbjct:    1 MTSGADPIECLERVELAPDAQLGTVLRATRAIAAGDVVLRERPLVVSAGYADLMRQAGGGIDMDNATKFLLLGYSHGFAMGDPSAPYGMDLSLLPNEYQERRGLMRLGGFMAPSCAPNCMRSARATPGYMTLVATRAIAAGDAVTRDAARLADTTKACREETLLSRGVACACARCAAPDLAFSLPCPAAAAGRCRGTLAPMLPASSPWPAANPADRAYVDGDELAAWTWQCSRCALRLHGRAMLPRLQPASALSQRLEALDAALPYSDMDARLHAPLTALIADARRELCATHIVVHRALKTLAMLYVCTTVNYDDIAAARLSDDDGSVISSRARVLALAAKTEMDALRVLECTVAGCDCGAECNANHQIIKDGIPYTMNAVKSLQHASAAXXXXXXXXXXXXXXXXXXXXXXXAARCPRLVPHLRRYVPFFAATVGAQSDEALDMAAALGVLPGGDAPLYCANCLAVSAEAAALKSCGRCRCVRYCSAACQRAHYARHHKRVCKRLAALASEHGGXXXXXXAAPMDFSGIVGVEGDSALRIFR 543          
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Match: A0A835YI78_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI78_9STRA)

HSP 1 Score: 620 bits (1598), Expect = 1.580e-215
Identity = 379/626 (60.54%), Postives = 422/626 (67.41%), Query Frame = 0
Query:    1 MTSGADPIECLERVELAPDAQLGTVLRATRAIAAGDVVLRERPLVVSAGYADLMRQ---------------------------------------AGGGIDMDNATKFLLLGYSHGFAMGDPSAPYG---MDLSLLPNEYQERRGLMRLGGFMAPSCAPNCMRSARATPGYMTLVATRAIAAGDAVTRDAARLADTTKACREETLLSRGVACACARCAAPDLAFSLPCPAAAAGRCRGTLAPMLPASSPWPAANPADRAY--VDGDELAAWTWQCSRCALRLHGRAMLPRLQPASALSQRLEALDAALPYSDMDARLHAPLTALIADARRELCATHIVVHRALKTLAMLYVCTTVNYDDIAAARLSDDDGSVISSRARVLALAAKTEMDALRVLECTVAGCDCGAECNANHQIIKDGIPYTMNAVKSLQHASAAXXXXXXXXXXXXXXXXXXXXXXX-----------------------------AARCPRLVPHLRRYVPFFAATVGAQSDEALDMAAALGVLPGGDAPLYCANCLAVSAE----------AAALKSCGRCRCVRYCSAACQRAHYARHHKRVCKRLAALASEHGGXXXXXXAAPMDFSGIVGVEGDSALRIFR 543
            MTSGADPIECLERVELAPDAQLG VL+ATR IAAGD+VL E PLV+ A YADL RQ                                       AGGGIDMD AT+F+LLG + G AM   S PYG     LS LPNE+QERRG +RL G+ APSCAPNCMRS RATP YMTLVATRAIAAG+ +TR+  +LADTT+A REETLL RG ACACARC APD+ F LPCPA+AA RC GTLAP+L AS     + P  RA   +   ELAAWTWQCSRCAL+L G A+LPRL P    S+RLEAL+AA+    +   LHAPLTALIADARR+LCATHI+V  AL +LA LY     N +D+A  RLSD+DGSVI+SRARV ALAAKTEMDALRVLECTVAGCD GAEC+A H  +KDG+PY +NA+KSLQHAS A             XXXXXXXXXX                             AARCPRLVPHLRRYVP  A  +G QSDEA +MAAALGVLPGGDAPLYCANC AV A             ALKSCGRC CVRYC AACQRAHYA HHKRVCKR AALA   G       AAP+DFSG+ G EGD+ALR+ R
Sbjct:    1 MTSGADPIECLERVELAPDAQLGRVLQATREIAAGDIVLCEGPLVLYASYADLTRQVKMMPAERIAELLDLFVDQNSARLSLQQARTVAVGAVREAGGGIDMDIATRFVLLGLAQGLAMPAASVPYGGVAHHLSCLPNEWQERRGFLRLAGWTAPSCAPNCMRSVRATPHYMTLVATRAIAAGETITRETVKLADTTRARREETLLRRGYACACARCGAPDVGFGLPCPASAAERCCGTLAPLLLASLR--PSKPGSRACTALHKGELAAWTWQCSRCALQLRGDAVLPRLAPVEVASRRLEALNAAMQSGAIKLSLHAPLTALIADARRQLCATHIIVRSALGSLATLYATAAANCNDMAVTRLSDEDGSVITSRARVHALAAKTEMDALRVLECTVAGCDRGAECDAVHPSMKDGVPYALNALKSLQHASIAAAAVPPGANAAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARCPRLVPHLRRYVPVVATMLGPQSDEAQEMAAALGVLPGGDAPLYCANCCAVPAARGAAAAVXXAVTALKSCGRCHCVRYCGAACQRAHYAGHHKRVCKRFAALAGGGGAGG----AAPVDFSGMSG-EGDAALRVVR 619          
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Match: A0A835YK69_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK69_9STRA)

HSP 1 Score: 529 bits (1362), Expect = 2.590e-180
Identity = 345/594 (58.08%), Postives = 388/594 (65.32%), Query Frame = 0
Query:    4 GADPIECLERVELAPDAQLGTVLRATRAIAAGDVVLRERPLVVSAGYADLMRQ----------------------------------------AGGGIDMDNATKFLLLGYSHGFAMGDPSAPYGM---DLSLLPNEYQERRGLMRLGGFMAPSCAPNCMRSARATPGYMTLVATRAIAAGDAVTRDAARLADTTKACREETLLSRGVACACARCAAPDLAFSLPCPAAAAGRCRGTLAPMLPASSPWPAANPADRAYVD--GDELAAWTWQCSRCALRLHGRAMLPRLQPASALSQRLEALDAALPYSDMDARLHAPLTALIADARRELCATHIVVHRALKTLAMLYVCTTVNYDDIAAARLSDDDGSVISSRARVLALAAKTEMDALRVLECTVAGCDCGAECNANHQIIKD-GIPYTMNAVKSLQHASAAXXXXXXXXXXXXXXXXXXXXXXXAARCPRLVPHLRRYVPFFAATVGAQSDEALDMAAALGV-LPGGDAPLYCANCLAVSAEAAA---------------LKSCGRCRCVRYCSAACQRAHYARHHKRVCKRLAALASEHGGXXXXXXAAPMDFSGIVGVEG 535
            GADPIECLERVELAPDAQLGTVLRATRA+AAG+VVLRERPLVV AGY DLMRQ                                        AGGGIDM  ATK +LLG SHGF+M D  A  G    DLS +P+E Q RRG MRL G  A SCAPNCMRSA AT GY TL+ATRAIAAG+A+TR   RL D+T+  R E L  +G ACACARC APD+ F LPC       CRGTLAP+LPA +     NP    Y +    E+ AWTW C+RCALRL G AML RL P + LSQRL+AL AAL  +       APL AL+AD RR+LCATHI+   AL  LA LY      +DD+AAARL+DDDG VI+SRARV ALAAKTEMDALRVLECT AGCD GAECNA H I+ + GI + +NA KSLQ+ SAA XXXXXXXXXXXXXXXXX     AARCPRLVPHLRRY P  A   G  SD+A+DMAAALG+ L  GD+PL CANC   +   AA               LK CG CRCVRYC AACQRAHYARHHK VCKRLAA+ +          AA ++F+   G  G
Sbjct:    3 GADPIECLERVELAPDAQLGTVLRATRALAAGEVVLRERPLVVYAGYTDLMRQVKRMPAKQIAELLGLLRDETMRAPLALEEARSVALPAVREAGGGIDMGVATKLVLLGSSHGFSMPDSPARGGKLVYDLSCMPDENQCRRGFMRLAGATALSCAPNCMRSACATLGYTTLIATRAIAAGEAITRSIVRLTDSTQVRRAELLTRQGHACACARCIAPDVGFGLPCFVEC---CRGTLAPLLPAVAA--CLNPDGHTYANKGAGEVTAWTWHCTRCALRLPGGAMLARLSPVTPLSQRLDALYAALSLNATQPCYAAPLAALLADTRRQLCATHIIALSALNLLATLYAAAAARFDDVAAARLADDDGRVITSRARVNALAAKTEMDALRVLECTPAGCDRGAECNAKHPIVAEPGIAHAVNAFKSLQYTSAAAXXXXXXXXXXXXXXXXXA----AARCPRLVPHLRRYAPVVAGFYGVHSDDAVDMAAALGMHLSRGDSPLCCANCAVAAPRGAAXXXXXXXXXXXXXAELKLCGGCRCVRYCGAACQRAHYARHHKHVCKRLAAVRA--------GCAAAVEFAARKGARG 579          
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Match: A0A836C8E8_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8E8_9STRA)

HSP 1 Score: 360 bits (925), Expect = 4.830e-118
Identity = 248/415 (59.76%), Postives = 269/415 (64.82%), Query Frame = 0
Query:  130 MTLVATRAIAAGDAVTRDAARLADTTKACREETLLSRGVACACARCAAPDLAFSLPCPAAAAGRCRGTLAPMLPASSPWPAANPADRAYVDGDELAAWTWQCSRCALRLHGRAMLPRLQPASALSQRLEALDAALPYSDMDARLHAPLTALIADARRELCATHIVVHRALKTLAMLYVCTTVNYDDIAAARLSDDDGSVISSRARVLALAAKTEMDALRVLECTVAGCDCGAECNANHQIIKDGIPYTMNAVKSLQHASAAXXXXXXXXXXXXXXXXXXXXXXXAARCPRLVPHLRRYVPFFAATVGAQSDEALDMAAALGVLPGGDAPLYCANCLAVSAEAAA-LKSCGRCRCVRYCSAACQRAHYARHHKRVCKRLAALASEHGGXXXXXXAAPMDFSGIVGVEGDSALRIFR 543
            MTLVATRAIAAGDAVTR+  +L+ TT+A  EE  L  G  C CARCAAPDL F LPCPAA   RCRGTLAP+LPASS  P  N      +DG                           P S  S+ L                                                Y     N DDIAAARLS +DGSVI+SRARV  LAAKTEMDALRVLECTVAGCDCGAEC++ H +IKDG+PY MNA+KSLQHAS AXXXXXXXXXXXXXXXXXXXXXX  ARCPRLVPHLRRYVP  A  +G QS+EALDMAAALGVLPGGDAPLYCANC  V   AA  LKSCGRCRCVRYC AACQRAHYARHHKRVC+R AAL SE GG      AAP+DFSG+ G EGD+ LR+FR
Sbjct:    1 MTLVATRAIAAGDAVTRETVKLSVTTQARLEEMRLWHGYTCTCARCAAPDLGFGLPCPAAE--RCRGTLAPLLPASSARPPVN------LDG---------------------------PPSRRSRTL------------------------------------------------YAAAAANCDDIAAARLSVEDGSVITSRARVHGLAAKTEMDALRVLECTVAGCDCGAECDSVHPVIKDGVPYAMNALKSLQHASIAXXXXXXXXXXXXXXXXXXXXXX--ARCPRLVPHLRRYVPVVATMLGPQSEEALDMAAALGVLPGGDAPLYCANCCTVPTAAALNLKSCGRCRCVRYCGAACQRAHYARHHKRVCRRFAALVSERGGSGGAGGAAPVDFSGMGGGEGDADLRMFR 330          
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Match: A0A835YS84_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS84_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 4.010e-13
Identity = 121/460 (26.30%), Postives = 165/460 (35.87%), Query Frame = 0
Query:  104 LMRLGGFMAPSCAPNCMRSARATPGYMTLVATRAIAAGDAVT----RDAARLADTTKACREETLLSRGVACACARCAAPDLAFSLPCPAAAAGRC-RGTLAPMLPASSPWPAANPADRAYVDGDELAAWTWQCSRCALRLHGRAMLPRLQPASALSQRLEAL--DAALPYSDMDARLHAPLTAL---IADARRELCATHIVVHRALKTLAMLYVCTT-VNYDDIAAARLSDDDGSVISSRARVLALAAKTEMDALRVLECTVAGCDCGAE---CNANHQIIKDGIPYTMNAVK---SLQHASAAXXXXXXXXXXXXXXXXXXXXXXXAARCPRLVPHLRRYVPFFAATVGAQSDEALDMAAALGVLPGGDAPLY------CANCLAVSAE-------------------------AAALKSCGRCRCVRYCSAACQRAHYARHHKRVCKRLAALASEHGG 515
            + RL     P+C PNC+ + +    YM+  A   IAAGD +T    R  A     T    E+    R   C CA+C  PD+   + C      RC  G + PM     P     P         +L    W+C  C       A+  +L  A+ +  R   L     LP   +       L  L   +  A  ELC +H +VH  ++ +AML    + +N   I     + + G+     A  L L     M+ L + EC  AGC    +   C   H +    +  T  A++   +L+  +A                               V  L RYVP  A   G   D  L  AA L + P   A         C + L   AE                         A AL  CG C  V YCS  CQR H+ + HK VCK LAA A  H G
Sbjct:  164 VFRLASRAVPACVPNCVSTTQNPYNYMSYYAAHPIAAGDLITIALPRSGAGRPTATLEWWEQLARVRDAVCTCAKCTGPDVMCGVKC-----ARCPNGVVTPMFTPPQPHERELP---------KLEDAAWRCDACGAAPERAALAAQLAEAARMEARASTLADPRQLPIKSLSKLAVDELKELRHLLWRAGMELCGSHRIVHIVMRGMAMLQESQSRMNLGVIVDIPHAAEYGAAQLQDAATLTL-----ME-LELAECAAAGCARRGQVFGCPRMHPVAAGQLDITRIALRIIGALRDPAAYIRKQKEETGGAD------------------VARLARYVPLLACAYGESHDAELAAAALLDLPPPRCAXXXXXXXPMCLHYLRRGAETYTSGGGXXXXXXXXXXXXXXXXXXAGALLKCGGCGLVAYCSRDCQRQHWKKCHKAVCKVLAAKAGNHSG 585          
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Match: A0A835YJF2_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJF2_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.840e-12
Identity = 95/307 (30.94%), Postives = 124/307 (40.39%), Query Frame = 0
Query:  223 ELAAWTWQCSRCALRLHGRAMLPRLQPASALSQRLEALDAALPYSDMD-----ARLHAPLTALIADARRELCATHIVVHRALKTLAML----------YVCTTVNYDDIAAARLSDDDGSVISSRARVLALAAKTEMDALRVLECTVAGCDC---GAECNANHQIIKDGIPYTMNAVKSLQHASAAXXXXXXXXXXXXXXXXXXXXXXXAARCPRLVPHLRRYVPFFAATVGAQSDEALDMAAALGVLPGGDAPL-YCANCLAVSAEAAALKSCGRCRCVRYCSAACQRAHYARHHKRVCKRLAALA 510
            EL    W+C  C        +  +L  A+ +  R  AL      SD        R  A L  L+A AR ELC TH V+  A ++LA L          Y   TV  D +A A+L D       +  R+L L  K         EC  AGC      A C   H +  +G      A+   + A A                            P  V  L RYVP  A  + A+++E L  AA L      D PL  CA     SA A AL +CG C  + YCS +CQR H+ + HK+VCK++AA A
Sbjct:  238 ELEDAAWRCDACGAAPDSVRLAAQLAEAARMEARALALANMHLLSDESILESAVREKAELRQLMARARAELCGTHRVLSVAARSLAALHDARYADLLKYYADTVGVDKLADAQLRD------VAALRLLRLGLK---------ECAAAGCTRRGGAASCARLHPVAANG-----GAIDLARGALATISMLQDSTAFVRKQKQEN---------PTDVERLARYVPLLACLLSARNNEVLAAAALL------DLPLPRCAEPAGSSAAAVALLTCGGCGLLDYCSRSCQRRHWKKCHKKVCKKVAAWA 509          
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Match: A0A836CCS1_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCS1_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 8.530e-11
Identity = 123/441 (27.89%), Postives = 164/441 (37.19%), Query Frame = 0
Query:  104 LMRLGGFMAPSCAPNCMRSARATPGYMTLVATRAIAAGDAVTRDAARLA--DTTKACREETLLS--RGVACACARCAAPDLAFSLPCPAAAAGRCRGTLAPMLPASSPWPAANPADRAYVDGDELAAWTWQCSRCALRLHGRAMLPRLQPASALSQRLEALDAALPYSDMDARLH--APLTALIADARRELCATHIVVHRALKTLAMLYVCTTVNYDDIAAARLSDDDGSVISSRARVLALAAKTEMDALRVLECTVAGC--DCGAE-CNANHQIIKDGIPYTMNAVKSLQHASAAXXXXXXXXXXXXXXXXXXXXXXXAARCPRLVPHLRRYVPFFAATVGAQSDEALDMAAALGV-LPG-GDAPL-YCANCL---AVSAEAAALKS-------------------CGRCRCVRYCSAACQRAHYARHHKRVCKRLAALA 510
            L R+    A SC PNC+ S +   G ++  A   IAAGD +T     L   + T      ++L+  R V C CA+C  PD+   + C   A G    T  P        P  +  +   ++  E     W+C  C        +  +L  A  +  R  A       S  D  ++  A L  L+A A  ELC +H VV  A +T A L     V+ +++       +  S++  + R    A    +  L + EC  AGC    GAE C   H I          A+ +L                                    V  L RYVP  A   GA  D  L   A L + LP   DA L  CA CL       EA                        CG CR V YCS  CQR H+ + HK VCKRLAA A
Sbjct:  165 LFRVASKAAYSCVPNCISSWQNPYGVISYYAAHPIAAGDPITIAFGTLTPGNATPTLERWSMLASRRDVVCTCAQCTGPDVTRGVKCACCAEGVVMPTFTP--------PPLHVRELPSLEDAE-----WRCDTCDKEPERTRLAAQLAEAECMEARAAAAHRLSLRSIRDGLVYETAELYQLVARACAELCGSHNVVLVATRTAAALL--EVVSEENMRHRAGYTNTASIVEQQLRE---ATALNLMTLGLAECVTAGCVRRGGAERCERAHPIAAGLRNEARTALVTLMRQRDPVAFIRQQREEDATD----------------VERLARYVPLLACAHGASDDVVLAAVAVLDLPLPRCADAGLRLCAACLHDRRRDGEAXXXXXXXXXXXXXXXXXXXXXXLVCGGCRLVAYCSHDCQRQHWKKCHKAVCKRLAAKA 571          
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Match: A0A835YNU4_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU4_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 2.000e-10
Identity = 139/528 (26.33%), Postives = 201/528 (38.07%), Query Frame = 0
Query:   22 LGTVLRATRAIAAGDVVLRERPLVVSAGYADLMRQAGGGIDMDN-----ATKFLLLGYSHGFAMGDPSAP---YGMDLSLLPNEYQ---ERRGLMRLGGFM------APSCAPNCMRSARATPGYMTLVATRAIAAGDAVT--RDAARLADTTKACREETLLSRGVACACARCAAPDLAFSLPCPAAAAGRCRGTLAPMLPASSPWPAANPADRAYVDGDELAAWTWQCSRCALRLHGRAMLPRLQPASALSQRLEAL--DAALPYSDMDARLHAPLTALIADARRELCATHIVVHRALKTLAMLYVCTTVNYDDIAAARLSDDDGSVISSRARVLALAAKTEMDALRVLECTVAGCDCGAECNANHQIIKDGIPYTMNAVKSLQHASAAXXXXXXXXXXXXXXXXXXXXXXXAARCPRLVPHLRRYVPFFAATVGAQSDEALDMAAALGVLP----GGDAPLYCANCLA----------VSAEAAALKSCGRCRCVRYCSAACQRAHYARHHKRVCKRLAALASEHG 514
            LG VL+AT+  + GD+VLRE PL+   G+  ++ +    +  +      A   L LG    F     S+    + +  S    +      R    ++G  +      A SC PNC+ +++   G M+  A + IAAGD +T     A  A T +   E    ++   CAC +C+ P     + C   A G    T AP  P +             V G E AAW  +C  C        +  +L  A  L  R+ A+  D     + ++    A  T L+  ARR LC TH  V  A + L +L          +AA R S   G+  ++ A   A AA   M  +R+ E              +H I   G+    +A++++                              A C         Y+P  A   G   D  L  AA LG+ P        PL CA C+                AAL  CG C  V YC   CQ+ H+ + HK VCK LAA  S  G
Sbjct:   14 LGRVLQATKTFSPGDLVLREEPLLQ--GFNAMLSELIEALSPEKREQLFAMHHLRLGDRPRFLSSSSSSTARCHAVGRSAAERDSTGTASRPPAAKVGHHICAGVKAAHSCTPNCLWTSQTPCGAMSYFAAQPIAAGDPITICYSDASTAPTLERWAE-LAQAKDFICACPQCSGPGATRGVRCARCADGVAVPTFAPPPPRAR-----------AVPGMEAAAW--RCDACGRAPDAAHLAQQLAEAQRLEARVHAIAEDTRCGRALLEGGARAAAT-LLRRARRALCGTHGAVLAAARKLRLLQGV-------LAALRRSG--GAAGAANAHYEAAAAYDIM-LMRLAE--------------SHPIAAAGVGDAYDALRNV---------VALRDPQEFVRKLSADDAQRLACC---------YLPLVACATGPSDDMVLAAAAILGLPPLLRCVDMQPLVCAACMRGXXXXXXXXXXXXPLAALLLCGGCGLVGYCGCECQKQHWQKCHKAVCKALAADDSGGG 482          
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Match: A0A836CDU1_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDU1_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 6.070e-7
Identity = 109/376 (28.99%), Postives = 138/376 (36.70%), Query Frame = 0
Query:  170 CACARCAAPDLAFSLPCPAAAAGRCRGTLAPMLPASSPWPAANPADRAYVDGDELAAWTWQCSRCALRLHGRAMLPRLQPAS-----ALSQRLEALDAALPYSDMDARLHAPLTALIADARRELCATHIVVHRALKTLA-MLYVCTTVNYDDIAA----ARLSDDDGSVISSRARVLALAAKTEMDALRVLECTVAGCDC--GAE-CNANHQIIKDGIPYTMNAVKSLQHASAAXXXXXXXXXXXXXXXXXXXXXXXAARCPRLVPHLRRYVPFFAATVGAQSDEALDMAAALGV-LPG--GDAPLYCANCL---AVSAEAAALKS-----------CGRCRCVRYCSAACQRAHYARHHKRVCKRLAALASEHGG 515
            CACA+C  PD+   + C   A G    T A  LP         PA    +   E AAW   C  C       A+  RL  A+     AL+   +  D  L   D+   +   L  L+  AR ELC TH +VH A +  A +L   +  N   +A+    A ++D+           L  AA   +  L + EC  AGC    GAE C   H I    +      + +L                                    V  L RYVP  A   GA  D  L   A L + LP     AP  CA CL       EA                CG C  V YCS  CQR H+ +  K VCK+LAA A   GG
Sbjct:  193 CACAQCTGPDVTRGVKCAHCANGVVMPTFA--LP---------PAHVPQLPKLEDAAWL--CDTCGDVPEHTALAARLAEAASTEALALADMRQLADQ-LVLVDLVPEMQ-ELYRLLTRARAELCGTHNIVHLAQRIPATLLGAVSEFNMQLVASGVGTAHVADEQ----------LRDAAALNLTLLGLAECAAAGCARRRGAERCARVHPIAAGELDLARTTLVTLARQRDPAGFIRKQTEEDATD----------------VERLARYVPLLACASGASDDVVLAAVALLDLPLPRCVDAAPRRCAGCLHHRRCGVEAGXXXXXXXXXXXXXLMCGGCELVAYCSRGCQRQHWKKCDKAVCKKLAAKAGNRGG 527          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A835YII0_9STRA0.000e+0100.00MYND-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835YI78_9STRA1.580e-21560.54MYND-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835YK69_9STRA2.590e-18058.08MYND-type domain-containing protein n=1 Tax=Tribon... [more]
A0A836C8E8_9STRA4.830e-11859.76MYND-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835YS84_9STRA4.010e-1326.30MYND-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835YJF2_9STRA1.840e-1230.94MYND-type domain-containing protein n=1 Tax=Tribon... [more]
A0A836CCS1_9STRA8.530e-1127.89MYND-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835YNU4_9STRA2.000e-1026.33MYND-type domain-containing protein n=1 Tax=Tribon... [more]
A0A836CDU1_9STRA6.070e-728.99MYND-type domain-containing protein n=1 Tax=Tribon... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 461..503
e-value: 5.5E-7
score: 29.6
IPR002893Zinc finger, MYND-typePROSITEPS01360ZF_MYND_1coord: 461..503
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 461..503
score: 10.703889
IPR046341SET domain superfamilyGENE3D2.170.270.10SET domaincoord: 11..179
e-value: 5.1E-9
score: 37.8
IPR046341SET domain superfamilySUPERFAMILY82199SET domaincoord: 13..175
NoneNo IPR availableGENE3D6.10.140.2220coord: 460..511
e-value: 8.2E-10
score: 40.3
NoneNo IPR availablePANTHERPTHR46455SET AND MYND DOMAIN CONTAINING, ARTHROPOD-SPECIFIC, MEMBER 4, ISOFORM Acoord: 97..251
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 459..507

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_85contigContig_85:73824..76055 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351257mRNA_12159Tribonema minus UTEX_B_3156 mRNAContig_85 73588..76055 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351257|estExt_Genemark1.C_Ctg_850010 ID=Trimin1|351257|estExt_Genemark1.C_Ctg_850010|Name=jgi.p|Trimin1|351257|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=544bp
MTSGADPIECLERVELAPDAQLGTVLRATRAIAAGDVVLRERPLVVSAGY
ADLMRQAGGGIDMDNATKFLLLGYSHGFAMGDPSAPYGMDLSLLPNEYQE
RRGLMRLGGFMAPSCAPNCMRSARATPGYMTLVATRAIAAGDAVTRDAAR
LADTTKACREETLLSRGVACACARCAAPDLAFSLPCPAAAAGRCRGTLAP
MLPASSPWPAANPADRAYVDGDELAAWTWQCSRCALRLHGRAMLPRLQPA
SALSQRLEALDAALPYSDMDARLHAPLTALIADARRELCATHIVVHRALK
TLAMLYVCTTVNYDDIAAARLSDDDGSVISSRARVLALAAKTEMDALRVL
ECTVAGCDCGAECNANHQIIKDGIPYTMNAVKSLQHASAAAAAEAPGTAV
AAAAPAAAAAAIAAARCPRLVPHLRRYVPFFAATVGAQSDEALDMAAALG
VLPGGDAPLYCANCLAVSAEAAALKSCGRCRCVRYCSAACQRAHYARHHK
RVCKRLAALASEHGGGGGAGGAAPMDFSGIVGVEGDSALRIFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND
IPR046341SET_dom_sf