mRNA_12159 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Match: A0A835YII0_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YII0_9STRA) HSP 1 Score: 984 bits (2543), Expect = 0.000e+0 Identity = 542/543 (99.82%), Postives = 542/543 (99.82%), Query Frame = 1 Query: 1 MTSGADPIECLERVELAPDAQLGTVLRATRAIAAGDVVLRERPLVVSAGYADLMRQAGGGIDMDNATKFLLLGYSHGFAMGDPSAPYGMDLSLLPNEYQERRGLMRLGGFMAPSCAPNCMRSARATPGYMTLVATRAIAAGDAVTRDAARLADTTKACREETLLSRGVACACARCAAPDLAFSLPCPAAAAGRCRGTLAPMLPASSPWPAANPADRAYVDGDELAAWTWQCSRCALRLHGRAMLPRLQPASALSQRLEALDAALPYSDMDARLHAPLTALIADARRELCATHIVVHRALKTLAMLYVCTTVNYDDIAAARLSDDDGSVISSRARVLALAAKTEMDALRVLECTVAGCDCGAECNANHQIIKDGIPYTMNAVKSLQHASAAXXXXXXXXXXXXXXXXXXXXXXXAARCPRLVPHLRRYVPFFAATVGAQSDEALDMAAALGVLPGGDAPLYCANCLAVSAEAAALKSCGRCRCVRYCSAACQRAHYARHHKRVCKRLAALASEHGGGXXXXXAAPMDFSGIVGVEGDSALRIFR 1629 MTSGADPIECLERVELAPDAQLGTVLRATRAIAAGDVVLRERPLVVSAGYADLMRQAGGGIDMDNATKFLLLGYSHGFAMGDPSAPYGMDLSLLPNEYQERRGLMRLGGFMAPSCAPNCMRSARATPGYMTLVATRAIAAGDAVTRDAARLADTTKACREETLLSRGVACACARCAAPDLAFSLPCPAAAAGRCRGTLAPMLPASSPWPAANPADRAYVDGDELAAWTWQCSRCALRLHGRAMLPRLQPASALSQRLEALDAALPYSDMDARLHAPLTALIADARRELCATHIVVHRALKTLAMLYVCTTVNYDDIAAARLSDDDGSVISSRARVLALAAKTEMDALRVLECTVAGCDCGAECNANHQIIKDGIPYTMNAVKSLQHASAAXXXXXXXXXXXXXXXXXXXXXXXAARCPRLVPHLRRYVPFFAATVGAQSDEALDMAAALGVLPGGDAPLYCANCLAVSAEAAALKSCGRCRCVRYCSAACQRAHYARHHKRVCKRLAALASEHGG XXXXXAAPMDFSGIVGVEGDSALRIFR Sbjct: 1 MTSGADPIECLERVELAPDAQLGTVLRATRAIAAGDVVLRERPLVVSAGYADLMRQAGGGIDMDNATKFLLLGYSHGFAMGDPSAPYGMDLSLLPNEYQERRGLMRLGGFMAPSCAPNCMRSARATPGYMTLVATRAIAAGDAVTRDAARLADTTKACREETLLSRGVACACARCAAPDLAFSLPCPAAAAGRCRGTLAPMLPASSPWPAANPADRAYVDGDELAAWTWQCSRCALRLHGRAMLPRLQPASALSQRLEALDAALPYSDMDARLHAPLTALIADARRELCATHIVVHRALKTLAMLYVCTTVNYDDIAAARLSDDDGSVISSRARVLALAAKTEMDALRVLECTVAGCDCGAECNANHQIIKDGIPYTMNAVKSLQHASAAXXXXXXXXXXXXXXXXXXXXXXXAARCPRLVPHLRRYVPFFAATVGAQSDEALDMAAALGVLPGGDAPLYCANCLAVSAEAAALKSCGRCRCVRYCSAACQRAHYARHHKRVCKRLAALASEHGGXXXXXXAAPMDFSGIVGVEGDSALRIFR 543
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Match: A0A835YI78_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI78_9STRA) HSP 1 Score: 621 bits (1602), Expect = 6.780e-215 Identity = 380/626 (60.70%), Postives = 423/626 (67.57%), Query Frame = 1 Query: 1 MTSGADPIECLERVELAPDAQLGTVLRATRAIAAGDVVLRERPLVVSAGYADLMRQ---------------------------------------AGGGIDMDNATKFLLLGYSHGFAMGDPSAPYG---MDLSLLPNEYQERRGLMRLGGFMAPSCAPNCMRSARATPGYMTLVATRAIAAGDAVTRDAARLADTTKACREETLLSRGVACACARCAAPDLAFSLPCPAAAAGRCRGTLAPMLPASSPWPAANPADRAY--VDGDELAAWTWQCSRCALRLHGRAMLPRLQPASALSQRLEALDAALPYSDMDARLHAPLTALIADARRELCATHIVVHRALKTLAMLYVCTTVNYDDIAAARLSDDDGSVISSRARVLALAAKTEMDALRVLECTVAGCDCGAECNANHQIIKDGIPYTMNAVKSLQHASAAXXXXXXXXXXXXXXXXXXXXXXX-----------------------------AARCPRLVPHLRRYVPFFAATVGAQSDEALDMAAALGVLPGGDAPLYCANCLAVSAE----------AAALKSCGRCRCVRYCSAACQRAHYARHHKRVCKRLAALASEHGGGXXXXXAAPMDFSGIVGVEGDSALRIFR 1629 MTSGADPIECLERVELAPDAQLG VL+ATR IAAGD+VL E PLV+ A YADL RQ AGGGIDMD AT+F+LLG + G AM S PYG LS LPNE+QERRG +RL G+ APSCAPNCMRS RATP YMTLVATRAIAAG+ +TR+ +LADTT+A REETLL RG ACACARC APD+ F LPCPA+AA RC GTLAP+L AS + P RA + ELAAWTWQCSRCAL+L G A+LPRL P S+RLEAL+AA+ + LHAPLTALIADARR+LCATHI+V AL +LA LY N +D+A RLSD+DGSVI+SRARV ALAAKTEMDALRVLECTVAGCD GAEC+A H +KDG+PY +NA+KSLQHAS A XXXXXXXXXX AARCPRLVPHLRRYVP A +G QSDEA +MAAALGVLPGGDAPLYCANC AV A ALKSCGRC CVRYC AACQRAHYA HHKRVCKR AALA GG AAP+DFSG+ G EGD+ALR+ R Sbjct: 1 MTSGADPIECLERVELAPDAQLGRVLQATREIAAGDIVLCEGPLVLYASYADLTRQVKMMPAERIAELLDLFVDQNSARLSLQQARTVAVGAVREAGGGIDMDIATRFVLLGLAQGLAMPAASVPYGGVAHHLSCLPNEWQERRGFLRLAGWTAPSCAPNCMRSVRATPHYMTLVATRAIAAGETITRETVKLADTTRARREETLLRRGYACACARCGAPDVGFGLPCPASAAERCCGTLAPLLLASLR--PSKPGSRACTALHKGELAAWTWQCSRCALQLRGDAVLPRLAPVEVASRRLEALNAAMQSGAIKLSLHAPLTALIADARRQLCATHIIVRSALGSLATLYATAAANCNDMAVTRLSDEDGSVITSRARVHALAAKTEMDALRVLECTVAGCDRGAECDAVHPSMKDGVPYALNALKSLQHASIAAAAVPPGANAAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARCPRLVPHLRRYVPVVATMLGPQSDEAQEMAAALGVLPGGDAPLYCANCCAVPAARGAAAAVXXAVTALKSCGRCHCVRYCGAACQRAHYAGHHKRVCKRFAALA----GGGGAGGAAPVDFSGMSG-EGDAALRVVR 619
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Match: A0A835YK69_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK69_9STRA) HSP 1 Score: 529 bits (1363), Expect = 2.830e-179 Identity = 345/594 (58.08%), Postives = 388/594 (65.32%), Query Frame = 1 Query: 10 GADPIECLERVELAPDAQLGTVLRATRAIAAGDVVLRERPLVVSAGYADLMRQ----------------------------------------AGGGIDMDNATKFLLLGYSHGFAMGDPSAPYGM---DLSLLPNEYQERRGLMRLGGFMAPSCAPNCMRSARATPGYMTLVATRAIAAGDAVTRDAARLADTTKACREETLLSRGVACACARCAAPDLAFSLPCPAAAAGRCRGTLAPMLPASSPWPAANPADRAYVD--GDELAAWTWQCSRCALRLHGRAMLPRLQPASALSQRLEALDAALPYSDMDARLHAPLTALIADARRELCATHIVVHRALKTLAMLYVCTTVNYDDIAAARLSDDDGSVISSRARVLALAAKTEMDALRVLECTVAGCDCGAECNANHQIIKD-GIPYTMNAVKSLQHASAAXXXXXXXXXXXXXXXXXXXXXXXAARCPRLVPHLRRYVPFFAATVGAQSDEALDMAAALGV-LPGGDAPLYCANCLAVSAEAAA---------------LKSCGRCRCVRYCSAACQRAHYARHHKRVCKRLAALASEHGGGXXXXXAAPMDFSGIVGVEG 1605 GADPIECLERVELAPDAQLGTVLRATRA+AAG+VVLRERPLVV AGY DLMRQ AGGGIDM ATK +LLG SHGF+M D A G DLS +P+E Q RRG MRL G A SCAPNCMRSA AT GY TL+ATRAIAAG+A+TR RL D+T+ R E L +G ACACARC APD+ F LPC CRGTLAP+LPA + NP Y + E+ AWTW C+RCALRL G AML RL P + LSQRL+AL AAL + APL AL+AD RR+LCATHI+ AL LA LY +DD+AAARL+DDDG VI+SRARV ALAAKTEMDALRVLECT AGCD GAECNA H I+ + GI + +NA KSLQ+ SAA XXXXXXXXXXXXXXXXX AARCPRLVPHLRRY P A G SD+A+DMAAALG+ L GD+PL CANC + AA LK CG CRCVRYC AACQRAHYARHHK VCKRLAA+ + AA ++F+ G G Sbjct: 3 GADPIECLERVELAPDAQLGTVLRATRALAAGEVVLRERPLVVYAGYTDLMRQVKRMPAKQIAELLGLLRDETMRAPLALEEARSVALPAVREAGGGIDMGVATKLVLLGSSHGFSMPDSPARGGKLVYDLSCMPDENQCRRGFMRLAGATALSCAPNCMRSACATLGYTTLIATRAIAAGEAITRSIVRLTDSTQVRRAELLTRQGHACACARCIAPDVGFGLPCFVEC---CRGTLAPLLPAVAA--CLNPDGHTYANKGAGEVTAWTWHCTRCALRLPGGAMLARLSPVTPLSQRLDALYAALSLNATQPCYAAPLAALLADTRRQLCATHIIALSALNLLATLYAAAAARFDDVAAARLADDDGRVITSRARVNALAAKTEMDALRVLECTPAGCDRGAECNAKHPIVAEPGIAHAVNAFKSLQYTSAAAXXXXXXXXXXXXXXXXXA----AARCPRLVPHLRRYAPVVAGFYGVHSDDAVDMAAALGMHLSRGDSPLCCANCAVAAPRGAAXXXXXXXXXXXXXAELKLCGGCRCVRYCGAACQRAHYARHHKHVCKRLAAVRA--------GCAAAVEFAARKGARG 579
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Match: A0A836C8E8_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8E8_9STRA) HSP 1 Score: 359 bits (922), Expect = 1.490e-116 Identity = 248/415 (59.76%), Postives = 269/415 (64.82%), Query Frame = 1 Query: 388 MTLVATRAIAAGDAVTRDAARLADTTKACREETLLSRGVACACARCAAPDLAFSLPCPAAAAGRCRGTLAPMLPASSPWPAANPADRAYVDGDELAAWTWQCSRCALRLHGRAMLPRLQPASALSQRLEALDAALPYSDMDARLHAPLTALIADARRELCATHIVVHRALKTLAMLYVCTTVNYDDIAAARLSDDDGSVISSRARVLALAAKTEMDALRVLECTVAGCDCGAECNANHQIIKDGIPYTMNAVKSLQHASAAXXXXXXXXXXXXXXXXXXXXXXXAARCPRLVPHLRRYVPFFAATVGAQSDEALDMAAALGVLPGGDAPLYCANCLAVSAEAAA-LKSCGRCRCVRYCSAACQRAHYARHHKRVCKRLAALASEHGGGXXXXXAAPMDFSGIVGVEGDSALRIFR 1629 MTLVATRAIAAGDAVTR+ +L+ TT+A EE L G C CARCAAPDL F LPCPAA RCRGTLAP+LPASS P N +DG P S S+ L Y N DDIAAARLS +DGSVI+SRARV LAAKTEMDALRVLECTVAGCDCGAEC++ H +IKDG+PY MNA+KSLQHAS AXXXXXXXXXXXXXXXXXXXXXX ARCPRLVPHLRRYVP A +G QS+EALDMAAALGVLPGGDAPLYCANC V AA LKSCGRCRCVRYC AACQRAHYARHHKRVC+R AAL SE GG AAP+DFSG+ G EGD+ LR+FR Sbjct: 1 MTLVATRAIAAGDAVTRETVKLSVTTQARLEEMRLWHGYTCTCARCAAPDLGFGLPCPAAE--RCRGTLAPLLPASSARPPVN------LDG---------------------------PPSRRSRTL------------------------------------------------YAAAAANCDDIAAARLSVEDGSVITSRARVHGLAAKTEMDALRVLECTVAGCDCGAECDSVHPVIKDGVPYAMNALKSLQHASIAXXXXXXXXXXXXXXXXXXXXXX--ARCPRLVPHLRRYVPVVATMLGPQSEEALDMAAALGVLPGGDAPLYCANCCTVPTAAALNLKSCGRCRCVRYCGAACQRAHYARHHKRVCRRFAALVSERGGSGGAGGAAPVDFSGMGGGEGDADLRMFR 330
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Match: A0A835YS84_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS84_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 7.220e-13 Identity = 121/460 (26.30%), Postives = 165/460 (35.87%), Query Frame = 1 Query: 310 LMRLGGFMAPSCAPNCMRSARATPGYMTLVATRAIAAGDAVT----RDAARLADTTKACREETLLSRGVACACARCAAPDLAFSLPCPAAAAGRC-RGTLAPMLPASSPWPAANPADRAYVDGDELAAWTWQCSRCALRLHGRAMLPRLQPASALSQRLEAL--DAALPYSDMDARLHAPLTAL---IADARRELCATHIVVHRALKTLAMLYVCTT-VNYDDIAAARLSDDDGSVISSRARVLALAAKTEMDALRVLECTVAGCDCGAE---CNANHQIIKDGIPYTMNAVK---SLQHASAAXXXXXXXXXXXXXXXXXXXXXXXAARCPRLVPHLRRYVPFFAATVGAQSDEALDMAAALGVLPGGDAPLY------CANCLAVSAE-------------------------AAALKSCGRCRCVRYCSAACQRAHYARHHKRVCKRLAALASEHGG 1545 + RL P+C PNC+ + + YM+ A IAAGD +T R A T E+ R C CA+C PD+ + C RC G + PM P P +L W+C C A+ +L A+ + R L LP + L L + A ELC +H +VH ++ +AML + +N I + + G+ A L L M+ L + EC AGC + C H + + T A++ +L+ +A V L RYVP A G D L AA L + P A C + L AE A AL CG C V YCS CQR H+ + HK VCK LAA A H G Sbjct: 164 VFRLASRAVPACVPNCVSTTQNPYNYMSYYAAHPIAAGDLITIALPRSGAGRPTATLEWWEQLARVRDAVCTCAKCTGPDVMCGVKC-----ARCPNGVVTPMFTPPQPHERELP---------KLEDAAWRCDACGAAPERAALAAQLAEAARMEARASTLADPRQLPIKSLSKLAVDELKELRHLLWRAGMELCGSHRIVHIVMRGMAMLQESQSRMNLGVIVDIPHAAEYGAAQLQDAATLTL-----ME-LELAECAAAGCARRGQVFGCPRMHPVAAGQLDITRIALRIIGALRDPAAYIRKQKEETGGAD------------------VARLARYVPLLACAYGESHDAELAAAALLDLPPPRCAXXXXXXXPMCLHYLRRGAETYTSGGGXXXXXXXXXXXXXXXXXXAGALLKCGGCGLVAYCSRDCQRQHWKKCHKAVCKVLAAKAGNHSG 585
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Match: A0A835YJF2_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJF2_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 2.440e-12 Identity = 95/307 (30.94%), Postives = 124/307 (40.39%), Query Frame = 1 Query: 667 ELAAWTWQCSRCALRLHGRAMLPRLQPASALSQRLEALDAALPYSDMD-----ARLHAPLTALIADARRELCATHIVVHRALKTLAML----------YVCTTVNYDDIAAARLSDDDGSVISSRARVLALAAKTEMDALRVLECTVAGCDC---GAECNANHQIIKDGIPYTMNAVKSLQHASAAXXXXXXXXXXXXXXXXXXXXXXXAARCPRLVPHLRRYVPFFAATVGAQSDEALDMAAALGVLPGGDAPL-YCANCLAVSAEAAALKSCGRCRCVRYCSAACQRAHYARHHKRVCKRLAALA 1530 EL W+C C + +L A+ + R AL SD R A L L+A AR ELC TH V+ A ++LA L Y TV D +A A+L D + R+L L K EC AGC A C H + +G A+ + A A P V L RYVP A + A+++E L AA L D PL CA SA A AL +CG C + YCS +CQR H+ + HK+VCK++AA A Sbjct: 238 ELEDAAWRCDACGAAPDSVRLAAQLAEAARMEARALALANMHLLSDESILESAVREKAELRQLMARARAELCGTHRVLSVAARSLAALHDARYADLLKYYADTVGVDKLADAQLRD------VAALRLLRLGLK---------ECAAAGCTRRGGAASCARLHPVAANG-----GAIDLARGALATISMLQDSTAFVRKQKQEN---------PTDVERLARYVPLLACLLSARNNEVLAAAALL------DLPLPRCAEPAGSSAAAVALLTCGGCGLLDYCSRSCQRRHWKKCHKKVCKKVAAWA 509
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Match: A0A835YNU4_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU4_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.110e-10 Identity = 140/530 (26.42%), Postives = 203/530 (38.30%), Query Frame = 1 Query: 64 LGTVLRATRAIAAGDVVLRERPLVVSAGYADLMRQAGGGIDMDN-----ATKFLLLGYSHGFAMGDPSAP---YGMDLSLLPNEYQ---ERRGLMRLGGFM------APSCAPNCMRSARATPGYMTLVATRAIAAGDAVT--RDAARLADTTKACREETLLSRGVACACARCAAPDLAFSLPCPAAAAGRCRGTLAPMLPASSPWPAANPADRAYVDGDELAAWTWQCSRCALRLHGRAMLPRLQPASALSQRLEAL--DAALPYSDMDARLHAPLTALIADARRELCATHIVVHRALKTLAMLYVCTTVNYDDIAAARLSDDDGSVISSRARVLALAAKTEMDALRVLECTVAGCDCGAECNANHQIIKDGIPYTMNAVKSLQHASAAXXXXXXXXXXXXXXXXXXXXXXXAARCPRLVPHLRRYVPFFAATVGAQSDEALDMAAALGVLP----GGDAPLYCANCLA----------VSAEAAALKSCGRCRCVRYCSAACQRAHYARHHKRVCKRLAALASEHGGG 1548 LG VL+AT+ + GD+VLRE PL+ G+ ++ + + + A L LG F S+ + + S + R ++G + A SC PNC+ +++ G M+ A + IAAGD +T A A T + E ++ CAC +C+ P + C A G T AP P + V G E AAW +C C + +L A L R+ A+ D + ++ A T L+ ARR LC TH V A + L +L +AA R S G+ ++ A A AA M +R+ E +H I G+ +A++++ A C Y+P A G D L AA LG+ P PL CA C+ AAL CG C V YC CQ+ H+ + HK VCK LA A + GGG Sbjct: 14 LGRVLQATKTFSPGDLVLREEPLLQ--GFNAMLSELIEALSPEKREQLFAMHHLRLGDRPRFLSSSSSSTARCHAVGRSAAERDSTGTASRPPAAKVGHHICAGVKAAHSCTPNCLWTSQTPCGAMSYFAAQPIAAGDPITICYSDASTAPTLERWAE-LAQAKDFICACPQCSGPGATRGVRCARCADGVAVPTFAPPPPRAR-----------AVPGMEAAAW--RCDACGRAPDAAHLAQQLAEAQRLEARVHAIAEDTRCGRALLEGGARAAAT-LLRRARRALCGTHGAVLAAARKLRLLQGV-------LAALRRSG--GAAGAANAHYEAAAAYDIM-LMRLAE--------------SHPIAAAGVGDAYDALRNV---------VALRDPQEFVRKLSADDAQRLACC---------YLPLVACATGPSDDMVLAAAAILGLPPLLRCVDMQPLVCAACMRGXXXXXXXXXXXXPLAALLLCGGCGLVGYCGCECQKQHWQKCHKAVCKALA--ADDSGGG 482
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Match: A0A836CCS1_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCS1_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.130e-10 Identity = 123/441 (27.89%), Postives = 164/441 (37.19%), Query Frame = 1 Query: 310 LMRLGGFMAPSCAPNCMRSARATPGYMTLVATRAIAAGDAVTRDAARLA--DTTKACREETLLS--RGVACACARCAAPDLAFSLPCPAAAAGRCRGTLAPMLPASSPWPAANPADRAYVDGDELAAWTWQCSRCALRLHGRAMLPRLQPASALSQRLEALDAALPYSDMDARLH--APLTALIADARRELCATHIVVHRALKTLAMLYVCTTVNYDDIAAARLSDDDGSVISSRARVLALAAKTEMDALRVLECTVAGC--DCGAE-CNANHQIIKDGIPYTMNAVKSLQHASAAXXXXXXXXXXXXXXXXXXXXXXXAARCPRLVPHLRRYVPFFAATVGAQSDEALDMAAALGV-LPG-GDAPL-YCANCL---AVSAEAAALKS-------------------CGRCRCVRYCSAACQRAHYARHHKRVCKRLAALA 1530 L R+ A SC PNC+ S + G ++ A IAAGD +T L + T ++L+ R V C CA+C PD+ + C A G T P P + + ++ E W+C C + +L A + R A S D ++ A L L+A A ELC +H VV A +T A L V+ +++ + S++ + R A + L + EC AGC GAE C H I A+ +L V L RYVP A GA D L A L + LP DA L CA CL EA CG CR V YCS CQR H+ + HK VCKRLAA A Sbjct: 165 LFRVASKAAYSCVPNCISSWQNPYGVISYYAAHPIAAGDPITIAFGTLTPGNATPTLERWSMLASRRDVVCTCAQCTGPDVTRGVKCACCAEGVVMPTFTP--------PPLHVRELPSLEDAE-----WRCDTCDKEPERTRLAAQLAEAECMEARAAAAHRLSLRSIRDGLVYETAELYQLVARACAELCGSHNVVLVATRTAAALL--EVVSEENMRHRAGYTNTASIVEQQLRE---ATALNLMTLGLAECVTAGCVRRGGAERCERAHPIAAGLRNEARTALVTLMRQRDPVAFIRQQREEDATD----------------VERLARYVPLLACAHGASDDVVLAAVAVLDLPLPRCADAGLRLCAACLHDRRRDGEAXXXXXXXXXXXXXXXXXXXXXXLVCGGCRLVAYCSHDCQRQHWKKCHKAVCKRLAAKA 571
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Match: A0A836CDU1_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDU1_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 1.010e-6 Identity = 109/376 (28.99%), Postives = 138/376 (36.70%), Query Frame = 1 Query: 508 CACARCAAPDLAFSLPCPAAAAGRCRGTLAPMLPASSPWPAANPADRAYVDGDELAAWTWQCSRCALRLHGRAMLPRLQPAS-----ALSQRLEALDAALPYSDMDARLHAPLTALIADARRELCATHIVVHRALKTLA-MLYVCTTVNYDDIAA----ARLSDDDGSVISSRARVLALAAKTEMDALRVLECTVAGCDC--GAE-CNANHQIIKDGIPYTMNAVKSLQHASAAXXXXXXXXXXXXXXXXXXXXXXXAARCPRLVPHLRRYVPFFAATVGAQSDEALDMAAALGV-LPG--GDAPLYCANCL---AVSAEAAALKS-----------CGRCRCVRYCSAACQRAHYARHHKRVCKRLAALASEHGG 1545 CACA+C PD+ + C A G T A LP PA + E AAW C C A+ RL A+ AL+ + D L D+ + L L+ AR ELC TH +VH A + A +L + N +A+ A ++D+ L AA + L + EC AGC GAE C H I + + +L V L RYVP A GA D L A L + LP AP CA CL EA CG C V YCS CQR H+ + K VCK+LAA A GG Sbjct: 193 CACAQCTGPDVTRGVKCAHCANGVVMPTFA--LP---------PAHVPQLPKLEDAAWL--CDTCGDVPEHTALAARLAEAASTEALALADMRQLADQ-LVLVDLVPEMQ-ELYRLLTRARAELCGTHNIVHLAQRIPATLLGAVSEFNMQLVASGVGTAHVADEQ----------LRDAAALNLTLLGLAECAAAGCARRRGAERCARVHPIAAGELDLARTTLVTLARQRDPAGFIRKQTEEDATD----------------VERLARYVPLLACASGASDDVVLAAVALLDLPLPRCVDAAPRRCAGCLHHRRCGVEAGXXXXXXXXXXXXXLMCGGCELVAYCSRGCQRQHWKKCDKAVCKKLAAKAGNRGG 527
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Match: A0A835YKF7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKF7_9STRA) HSP 1 Score: 224 bits (570), Expect = 4.550e-73 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 3 Query: 171 MAVNVTRHTVVIQPDFHLRIVVAGLGVLAVVYLLLLWQCWGTLNPRAAARRHKERRALQASYDEAFQRRDDLLYHLDWARQRGEKAEVKNLQGQLEGMLEELDDLESQRLNAAG 512 MAVNVTRHTVVIQPDFHLRIVVAGLGVLAVVYLLLLWQCWGTLNPRAAARRHKERRALQASYDEAFQRRDDLLYHLDWARQRGEKAEVKNLQGQLEGMLEELDDLESQRLNAAG Sbjct: 1 MAVNVTRHTVVIQPDFHLRIVVAGLGVLAVVYLLLLWQCWGTLNPRAAARRHKERRALQASYDEAFQRRDDLLYHLDWARQRGEKAEVKNLQGQLEGMLEELDDLESQRLNAAG 114
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Match: A0A7S3HFQ8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HFQ8_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 1.390e-10 Identity = 32/84 (38.10%), Postives = 50/84 (59.52%), Query Frame = 3 Query: 240 GLGVLAVVYLLLLWQCWGTLNPRAAARRHKERRALQASYDEAFQRRDDLLYHLDWARQRGEKAEVKNLQGQLEGMLEELDDLES 491 + V A YL + C+GT R A +K + +++ Y E F RD+L+YH+ WA+ RGE E +NL QLE + +E+D +E+ Sbjct: 27 AITVFAFFYLSAMKMCFGTYFVRTAMSNYKSNKVIRSRYYELFSSRDNLMYHISWAKSRGELEEARNLMRQLEKVDKEIDQIET 110
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Match: W7TKY8_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKY8_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 2.470e-8 Identity = 32/82 (39.02%), Postives = 46/82 (56.10%), Query Frame = 3 Query: 267 LLLLWQCWGTLNPRAAARRHKERRALQASYDEAFQRRDDLLYHLDWARQRGEKAEVKNLQGQLEGMLEELDDLESQRLNAAG 512 L +L C+GT + +ERR L+ +Y A+QRR+D +YH DWA+ RG +E K L ++E ELD L+ N G Sbjct: 31 LFVLRICFGTFSLSRVLAHFEERRHLERAYALAYQRREDSIYHRDWAKSRGAFSEAKRLDAEIEETESELDSLDDTLGNPQG 112
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Match: A0A4D9CYA4_9STRA (AAA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYA4_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 5.240e-8 Identity = 33/82 (40.24%), Postives = 48/82 (58.54%), Query Frame = 3 Query: 267 LLLLWQCWGTLNPRAAARRHKERRALQASYDEAFQRRDDLLYHLDWARQRGEKAEVKNLQGQLEGMLEELDDLESQRLNAAG 512 LL+L C+GT + +ERR L+ +Y A+QRR+D +YH DWA+ RG +E K L ++E ELD L+ + N G Sbjct: 31 LLILRICFGTFSLSRVLAHFEERRHLERAYALAYQRREDSIYHRDWAKSRGAFSEAKRLDAEIEETESELDSLDEKIGNPQG 112
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Match: A0A6H5L5M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M4_9PHAE) HSP 1 Score: 57.8 bits (138), Expect = 9.470e-8 Identity = 32/93 (34.41%), Postives = 56/93 (60.22%), Query Frame = 3 Query: 210 PDFHLRIVVAGLGVLAVVYLLLLWQCWGTLNPRAAARRHKERRALQASYDEAFQRRDDLLYHLDWARQRGEKAEVKNLQGQLEGMLEELDDLE 488 PD +R+++ +L +Y+ +++ CWGT++ KER+ L+ +Y+ QRR+D+LYH+ A+QRGE + L QL + +LD +E Sbjct: 9 PD--VRVLLYSFLLLLGIYVSVMYTCWGTVSLSKVKAEFKERQDLERAYEATLQRREDMLYHIGGAQQRGEHQQAAVLDKQLLRVDGDLDLIE 99 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
BLAST of jgi.p|Trimin1|351257 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12159 ID=mRNA_12159|Name=jgi.p|Trimin1|351257|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1868bp|location=Sequence derived from alignment at Contig_85:73588..76055- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGACGTCCGGCGCTGACCCCATCGAGTGCCTGGAGCGTGTGGAGCTGGCback to top protein sequence of jgi.p|Trimin1|351257 >Trimin1|351257|estExt_Genemark1.C_Ctg_850010 ID=Trimin1|351257|estExt_Genemark1.C_Ctg_850010|Name=jgi.p|Trimin1|351257|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=544bp MTSGADPIECLERVELAPDAQLGTVLRATRAIAAGDVVLRERPLVVSAGYback to top mRNA from alignment at Contig_85:73588..76055- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_12159 ID=mRNA_12159|Name=jgi.p|Trimin1|351257|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2468bp|location=Sequence derived from alignment at Contig_85:73588..76055- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_85:73588..76055- >mRNA_12159 ID=mRNA_12159|Name=jgi.p|Trimin1|351257|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1632bp|location=Sequence derived from alignment at Contig_85:73588..76055- (Tribonema minus UTEX_B_3156 )back to top |