Trimin1|350945|estExt_Genemark1.C_Ctg_760002 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350945
Unique NameTrimin1|350945|estExt_Genemark1.C_Ctg_760002
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length684
Homology
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BLAST of jgi.p|Trimin1|350945 vs. uniprot
Match: A0A836C8C2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8C2_9STRA)

HSP 1 Score: 650 bits (1676), Expect = 3.530e-224
Identity = 683/683 (100.00%), Postives = 683/683 (100.00%), Query Frame = 0 
Query:    1 MEVCSFAAEGGQLEALQWLRRTGSAWDEYTCWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPAERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALANGAPCNERLCSHYDLPLQADHAHCAARKGHVQMLQWLRDHGCYSPGDTQVCRFAAEGXXXXXXXXXXHTGSAWDESTYWAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEAGDGPMDXXXXXXXXXXXXXXXXXXXXXXXXNELTCSSSAVFGHLXXXXXXXXXXXXXXXXXXXXXXXXEVLQWALADGAPCDERLCRAKPHYIKQESGTQVCGCAAGXXXXXXXXXXXXXXXXXXXXTXHAAAAHXXXXXXXXXXXXXXXXXXXXXXXXXKGGYLEWLXXXXXXXXXXXXXXXXXXXXXEVLQWARANGXXQAVHAXXXXXXXXXXXXXXXWDASTMEAAKSEQRPAERAAARGAAAEPKSPATFCYKCCDEFGKYHCVHADYNACGLFGPQLVPADETTGLHCVDCDSTIPYLAKACIQNPSFEGDDSTTDLYRLDRADNAAKYIHKACYDARKEYATSRIIAFFKSKQQQKRRSTSTASDEPEPADKRQRVA 683
            MEVCSFAAEGGQLEALQWLRRTGSAWDEYTCWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPAERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALANGAPCNERLCSHYDLPLQADHAHCAARKGHVQMLQWLRDHGCYSPGDTQVCRFAAEGXXXXXXXXXXHTGSAWDESTYWAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEAGDGPMDXXXXXXXXXXXXXXXXXXXXXXXXNELTCSSSAVFGHLXXXXXXXXXXXXXXXXXXXXXXXXEVLQWALADGAPCDERLCRAKPHYIKQESGTQVCGCAAGXXXXXXXXXXXXXXXXXXXXTXHAAAAHXXXXXXXXXXXXXXXXXXXXXXXXXKGGYLEWLXXXXXXXXXXXXXXXXXXXXXEVLQWARANGXXQAVHAXXXXXXXXXXXXXXXWDASTMEAAKSEQRPAERAAARGAAAEPKSPATFCYKCCDEFGKYHCVHADYNACGLFGPQLVPADETTGLHCVDCDSTIPYLAKACIQNPSFEGDDSTTDLYRLDRADNAAKYIHKACYDARKEYATSRIIAFFKSKQQQKRRSTSTASDEPEPADKRQRVA
Sbjct:    1 MEVCSFAAEGGQLEALQWLRRTGSAWDEYTCWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPAERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALANGAPCNERLCSHYDLPLQADHAHCAARKGHVQMLQWLRDHGCYSPGDTQVCRFAAEGXXXXXXXXXXHTGSAWDESTYWAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEAGDGPMDXXXXXXXXXXXXXXXXXXXXXXXXNELTCSSSAVFGHLXXXXXXXXXXXXXXXXXXXXXXXXEVLQWALADGAPCDERLCRAKPHYIKQESGTQVCGCAAGXXXXXXXXXXXXXXXXXXXXTXHAAAAHXXXXXXXXXXXXXXXXXXXXXXXXXKGGYLEWLXXXXXXXXXXXXXXXXXXXXXEVLQWARANGXXQAVHAXXXXXXXXXXXXXXXWDASTMEAAKSEQRPAERAAARGAAAEPKSPATFCYKCCDEFGKYHCVHADYNACGLFGPQLVPADETTGLHCVDCDSTIPYLAKACIQNPSFEGDDSTTDLYRLDRADNAAKYIHKACYDARKEYATSRIIAFFKSKQQQKRRSTSTASDEPEPADKRQRVA 683
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BLAST of jgi.p|Trimin1|350945 vs. uniprot
Match: A0A835Z2S3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2S3_9STRA)

HSP 1 Score: 265 bits (677), Expect = 5.520e-82
Identity = 134/149 (89.93%), Postives = 138/149 (92.62%), Query Frame = 0 
Query:  535 PAERAAARGAAAEPKSPATFCYKCCDEFGKYHCVHADYNACGLFGPQLVPADETTGLHCVDCDSTIPYLAKACIQNPSFEGDDSTTDLYRLDRADNAAKYIHKACYDARKEYATSRIIAFFKSKQQQKRRSTSTASDEPEPADKRQRVA 683
            PAE AA  G+ ++    ATF YKCCDEFGKYHCVHADYNACGLFGPQLVPADETTGLHCVDCDSTIP LAKACIQNPSFEGDDSTTDLYRLD ADNAAKYIHKACY+ARKEYATSRIIAFFKSKQQQKRRSTSTASDEPEPADKRQRVA
Sbjct:    2 PAEDAA--GSESKMDVEATFFYKCCDEFGKYHCVHADYNACGLFGPQLVPADETTGLHCVDCDSTIPCLAKACIQNPSFEGDDSTTDLYRLDTADNAAKYIHKACYNARKEYATSRIIAFFKSKQQQKRRSTSTASDEPEPADKRQRVA 148
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BLAST of jgi.p|Trimin1|350945 vs. uniprot
Match: A0A835Z5V5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5V5_9STRA)

HSP 1 Score: 208 bits (529), Expect = 4.050e-60
Identity = 108/134 (80.60%), Postives = 109/134 (81.34%), Query Frame = 0 
Query:  550 SPATFCYKCCDEFGKYHCVHADYNACGLFGPQLVPADETTGLHCVDCDSTIPYLAKACIQNPSFEGDDSTTDLYRLDRADNAAKYIHKACYDARKEYATSRIIAFFKSKQQQKRRSTSTASDEPEPADKRQRVA 683
            S ATF YKCCDEFGKYHCVHADYNACGLF PQLVPADETTGLHC+DCD                  DDSTTDLYRL  ADNAAKYIHKACYDARKEYATSRIIAFFKSKQQQKR STSTASDEPE ADKRQRVA
Sbjct:   44 SLATFFYKCCDEFGKYHCVHADYNACGLFRPQLVPADETTGLHCMDCD------------------DDSTTDLYRLHTADNAAKYIHKACYDARKEYATSRIIAFFKSKQQQKRHSTSTASDEPEQADKRQRVA 159
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BLAST of jgi.p|Trimin1|350945 vs. uniprot
Match: A0A835ZFX1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFX1_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 9.320e-7
Identity = 23/29 (79.31%), Postives = 25/29 (86.21%), Query Frame = 0 
Query:    3 VCSFAAEGGQLEALQWLRRTGSAWDEYTC 31
            VC FAAEGGQLE LQWLRRTGS W+ +TC
Sbjct:    2 VCRFAAEGGQLEGLQWLRRTGSTWNSFTC 30
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350945 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A836C8C2_9STRA3.530e-224100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z2S3_9STRA5.520e-8289.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z5V5_9STRA4.050e-6080.60Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZFX1_9STRA9.320e-779.31Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..351
e-value: 1.7E-25
score: 91.4
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 356..546
e-value: 2.6E-6
score: 28.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 6..322
IPR002110Ankyrin repeatPFAMPF13637Ank_4coord: 152..206
e-value: 1.9E-6
score: 28.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 665..683
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 658..683
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 360..532
coord: 130..345
coord: 271..382
coord: 5..130
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 394..480
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 307..381

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_76contigContig_76:5488..13489 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350945mRNA_11321Tribonema minus UTEX_B_3156 mRNAContig_76 5293..13489 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350945|estExt_Genemark1.C_Ctg_760002 ID=Trimin1|350945|estExt_Genemark1.C_Ctg_760002|Name=jgi.p|Trimin1|350945|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=684bp
MEVCSFAAEGGQLEALQWLRRTGSAWDEYTCWAAARHGHLELLQWAHANG
CPWNSTVCSWAASGGQLAVLRWARAQGCPWNEGVCSGAAEAGHLEVLQWA
RANGCPWDKRTCFAAAKRGDLQMLQWLPAERAHLEVLQWARASSCPWDLR
TCWLAAEEGHLEVLRWALANGAPCNERLCSHYDLPLQADHAHCAARKGHV
QMLQWLRDHGCYSPGDTQVCRFAAEGGQLEALQWLRHTGSAWDESTYWAA
ADHGHLELLQWARANDCPWDAEVCSRAASGGHLAVLQWAHAQGCRWIEAG
DGPMDVCSCAARGGHLEVLQWARANGCAWNELTCSSSAVFGHLEWARANG
CPWDVGTSCFAAQGGHLEVLQWALADGAPCDERLCRAKPHYIKQESGTQV
CGCAAGAGQLEALQWLRRTGSAWDERTCHAAAAHGHLEVMQWGRANGCPW
DEEVCTEAAKGGYLEWLRANGCPWNSKTCDEGAEGGHLEVLQWARANGCP
QAVHAGRLEMLQLARAHGCPWDASTMEAAKSEQRPAERAAARGAAAEPKS
PATFCYKCCDEFGKYHCVHADYNACGLFGPQLVPADETTGLHCVDCDSTI
PYLAKACIQNPSFEGDDSTTDLYRLDRADNAAKYIHKACYDARKEYATSR
IIAFFKSKQQQKRRSTSTASDEPEPADKRQRVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt