mRNA_11321 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|350945
Unique Name	mRNA_11321
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|350945 vs. uniprot
Match: A0A836C8C2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8C2_9STRA)

HSP 1 Score: 650 bits (1677), Expect = 2.430e-223
Identity = 683/683 (100.00%), Postives = 683/683 (100.00%), Query Frame = 1

Query:    1 MEVCSFAAEGGQLEALQWLRRTGSAWDEYTCWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPAERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALANGAPCNERLCSHYDLPLQADHAHCAARKGHVQMLQWLRDHGCYSPGDTQVCRFAAEGXXXXXXXXXXHTGSAWDESTYWAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEAGDGPMDXXXXXXXXXXXXXXXXXXXXXXXXNELTCSSSAVFGHLXXXXXXXXXXXXXXXXXXXXXXXXEVLQWALADGAPCDERLCRAKPHYIKQESGTQVCGCAAGXXXXXXXXXXXXXXXXXXXXTXHAAAAHXXXXXXXXXXXXXXXXXXXXXXXXXKGGYLEWLXXXXXXXXXXXXXXXXXXXXXEVLQWARANGXXQAVHAXXXXXXXXXXXXXXXWDASTMEAAKSEQRPAERAAARGAAAEPKSPATFCYKCCDEFGKYHCVHADYNACGLFGPQLVPADETTGLHCVDCDSTIPYLAKACIQNPSFEGDDSTTDLYRLDRADNAAKYIHKACYDARKEYATSRIIAFFKSKQQQKRRSTSTASDEPEPADKRQRVA 2049
            MEVCSFAAEGGQLEALQWLRRTGSAWDEYTCWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPAERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALANGAPCNERLCSHYDLPLQADHAHCAARKGHVQMLQWLRDHGCYSPGDTQVCRFAAEGXXXXXXXXXXHTGSAWDESTYWAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEAGDGPMDXXXXXXXXXXXXXXXXXXXXXXXXNELTCSSSAVFGHLXXXXXXXXXXXXXXXXXXXXXXXXEVLQWALADGAPCDERLCRAKPHYIKQESGTQVCGCAAGXXXXXXXXXXXXXXXXXXXXTXHAAAAHXXXXXXXXXXXXXXXXXXXXXXXXXKGGYLEWLXXXXXXXXXXXXXXXXXXXXXEVLQWARANGXXQAVHAXXXXXXXXXXXXXXXWDASTMEAAKSEQRPAERAAARGAAAEPKSPATFCYKCCDEFGKYHCVHADYNACGLFGPQLVPADETTGLHCVDCDSTIPYLAKACIQNPSFEGDDSTTDLYRLDRADNAAKYIHKACYDARKEYATSRIIAFFKSKQQQKRRSTSTASDEPEPADKRQRVA
Sbjct:    1 MEVCSFAAEGGQLEALQWLRRTGSAWDEYTCWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPAERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALANGAPCNERLCSHYDLPLQADHAHCAARKGHVQMLQWLRDHGCYSPGDTQVCRFAAEGXXXXXXXXXXHTGSAWDESTYWAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEAGDGPMDXXXXXXXXXXXXXXXXXXXXXXXXNELTCSSSAVFGHLXXXXXXXXXXXXXXXXXXXXXXXXEVLQWALADGAPCDERLCRAKPHYIKQESGTQVCGCAAGXXXXXXXXXXXXXXXXXXXXTXHAAAAHXXXXXXXXXXXXXXXXXXXXXXXXXKGGYLEWLXXXXXXXXXXXXXXXXXXXXXEVLQWARANGXXQAVHAXXXXXXXXXXXXXXXWDASTMEAAKSEQRPAERAAARGAAAEPKSPATFCYKCCDEFGKYHCVHADYNACGLFGPQLVPADETTGLHCVDCDSTIPYLAKACIQNPSFEGDDSTTDLYRLDRADNAAKYIHKACYDARKEYATSRIIAFFKSKQQQKRRSTSTASDEPEPADKRQRVA 683

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BLAST of jgi.p|Trimin1|350945 vs. uniprot
Match: A0A835Z2S3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2S3_9STRA)

HSP 1 Score: 265 bits (678), Expect = 1.550e-81
Identity = 134/149 (89.93%), Postives = 138/149 (92.62%), Query Frame = 1

Query: 1603 PAERAAARGAAAEPKSPATFCYKCCDEFGKYHCVHADYNACGLFGPQLVPADETTGLHCVDCDSTIPYLAKACIQNPSFEGDDSTTDLYRLDRADNAAKYIHKACYDARKEYATSRIIAFFKSKQQQKRRSTSTASDEPEPADKRQRVA 2049
            PAE AA  G+ ++    ATF YKCCDEFGKYHCVHADYNACGLFGPQLVPADETTGLHCVDCDSTIP LAKACIQNPSFEGDDSTTDLYRLD ADNAAKYIHKACY+ARKEYATSRIIAFFKSKQQQKRRSTSTASDEPEPADKRQRVA
Sbjct:    2 PAEDAA--GSESKMDVEATFFYKCCDEFGKYHCVHADYNACGLFGPQLVPADETTGLHCVDCDSTIPCLAKACIQNPSFEGDDSTTDLYRLDTADNAAKYIHKACYNARKEYATSRIIAFFKSKQQQKRRSTSTASDEPEPADKRQRVA 148

[Close]

BLAST of jgi.p|Trimin1|350945 vs. uniprot
Match: A0A835Z5V5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5V5_9STRA)

HSP 1 Score: 208 bits (530), Expect = 7.700e-60
Identity = 108/134 (80.60%), Postives = 109/134 (81.34%), Query Frame = 1

Query: 1648 SPATFCYKCCDEFGKYHCVHADYNACGLFGPQLVPADETTGLHCVDCDSTIPYLAKACIQNPSFEGDDSTTDLYRLDRADNAAKYIHKACYDARKEYATSRIIAFFKSKQQQKRRSTSTASDEPEPADKRQRVA 2049
            S ATF YKCCDEFGKYHCVHADYNACGLF PQLVPADETTGLHC+DCD                  DDSTTDLYRL  ADNAAKYIHKACYDARKEYATSRIIAFFKSKQQQKR STSTASDEPE ADKRQRVA
Sbjct:   44 SLATFFYKCCDEFGKYHCVHADYNACGLFRPQLVPADETTGLHCMDCD------------------DDSTTDLYRLHTADNAAKYIHKACYDARKEYATSRIIAFFKSKQQQKRHSTSTASDEPEQADKRQRVA 159

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BLAST of jgi.p|Trimin1|350945 vs. uniprot
Match: A0A835YR30_9STRA (Uncharacterized protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR30_9STRA)

HSP 1 Score: 207 bits (526), Expect = 8.640e-59
Identity = 143/145 (98.62%), Postives = 143/145 (98.62%), Query Frame = 2

Query: 1655 QHSATNAXXXXXXXXXXXXXXXPAASSDPSWCPQTRQRDCTAWTATAQSLIWQRHAFRTPASKATTAXXXXXXXXEQTMQPSTSTRPAMMHAKNMPPRASSRSXXXXXXXXXXXHQQQVTNQNQQTSASVWRKHTNPASPDSEAI 2089
            QHSATNA XXXXXXXXXXXXXX AASSDPSWCPQTRQRDCTAWTATAQSLIWQRHAFRTPASKATTAXXXXXXXXEQTMQPSTSTRPAMMHAKNMPPRASSRSXXXXXXXXXXXHQQQVTNQNQQTSASVWRKHTNPASPDSEAI
Sbjct:   49 QHSATNAAXXXXXXXXXXXXXXXAASSDPSWCPQTRQRDCTAWTATAQSLIWQRHAFRTPASKATTAXXXXXXXXEQTMQPSTSTRPAMMHAKNMPPRASSRSXXXXXXXXXXXHQQQVTNQNQQTSASVWRKHTNPASPDSEAI 193

[Close]

BLAST of jgi.p|Trimin1|350945 vs. uniprot
Match: A0A835ZFX1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFX1_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 1.020e-6
Identity = 23/29 (79.31%), Postives = 25/29 (86.21%), Query Frame = 1

Query:    7 VCSFAAEGGQLEALQWLRRTGSAWDEYTC 93
            VC FAAEGGQLE LQWLRRTGS W+ +TC
Sbjct:    2 VCRFAAEGGQLEGLQWLRRTGSTWNSFTC 30

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|350945 vs. uniprot

BLAST of jgi.p|Trimin1|350945 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5


Match Name	E-value	Identity	Description
A0A836C8C2_9STRA	2.430e-223	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z2S3_9STRA	1.550e-81	89.93	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z5V5_9STRA	7.700e-60	80.60	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YR30_9STRA	8.640e-59	98.62	Uncharacterized protein n=3 Tax=Tribonema minus Ta...	[more]
A0A835ZFX1_9STRA	1.020e-6	79.31	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_76	contig	Contig_76:5293..13489 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|350945\|estExt_Genemark1.C_Ctg_760002
Hectar predicted targeting category	other localisation
TranscriptId	351267
Track	FilteredModels1
ProteinId	350945

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350945	gene_11321	Tribonema minus UTEX_B_3156	gene	Contig_76 5293..13489 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350945	Trimin1\|350945\|estExt_Genemark1.C_Ctg_760002	Tribonema minus UTEX_B_3156	polypeptide	Contig_76 5488..13489 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_11321_10	exon_11321_10	Tribonema minus UTEX_B_3156	exon	Contig_76 5293..5886 -
exon_11321_9	exon_11321_9	Tribonema minus UTEX_B_3156	exon	Contig_76 6941..6994 -
exon_11321_8	exon_11321_8	Tribonema minus UTEX_B_3156	exon	Contig_76 8148..8247 -
exon_11321_7	exon_11321_7	Tribonema minus UTEX_B_3156	exon	Contig_76 8350..8453 -
exon_11321_6	exon_11321_6	Tribonema minus UTEX_B_3156	exon	Contig_76 8706..8903 -
exon_11321_5	exon_11321_5	Tribonema minus UTEX_B_3156	exon	Contig_76 10074..10113 -
exon_11321_4	exon_11321_4	Tribonema minus UTEX_B_3156	exon	Contig_76 10248..10372 -
exon_11321_3	exon_11321_3	Tribonema minus UTEX_B_3156	exon	Contig_76 10625..11117 -
exon_11321_2	exon_11321_2	Tribonema minus UTEX_B_3156	exon	Contig_76 12747..12903 -
exon_11321_1	exon_11321_1	Tribonema minus UTEX_B_3156	exon	Contig_76 13108..13489 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_11321	UTR3_11321	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_76 5293..5487 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_11321	CDS_11321	Tribonema minus UTEX_B_3156	CDS	Contig_76 13108..13489 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_76:5293..13489-
coding sequence from alignment at Contig_76:5293..13489-

spliced messenger RNA

>mRNA_11321 ID=mRNA_11321|Name=jgi.p|Trimin1|350945|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2247bp|location=Sequence derived from alignment at Contig_76:5293..13489- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGGTTTGCAGCTTTGCCGCAGAGGGAGGGCAACTAGAAGCGCTGCA
GTGGCTGCGCCGCACCGGCAGTGCCTGGGACGAGTACACATGCTGGGCTG
CAGCGCGTCATGGACACTTGGAGCTGCTTCAGTGGGCGCACGCCAACGGC
TGCCCCTGGAACAGCACGGTCTGCTCATGGGCGGCATCAGGCGGGCAGCT
AGCAGTGCTTCGGTGGGCCCGCGCCCAAGGCTGCCCCTGGAATGAGGGGG
TCTGCTCAGGGGCAGCGGAAGCCGGGCACCTAGAGGTGCTGCAGTGGGCG
CGCGCCAACGGCTGCCCCTGGGACAAGCGCACCTGCTTTGCTGCTGCCAA
GCGAGGGGACTTGCAGATGCTGCAGTGGCTTCCTGCGGAGCGGGCGCATC
TTGAGGTGCTGCAGTGGGCGCGCGCCAGCAGCTGCCCCTGGGACCTGCGA
ACCTGCTGGCTCGCTGCCGAGGAAGGGCACCTCGAGGTGCTGCGGTGGGC
GCTCGCGAACGGCGCCCCCTGCAACGAGCGGCTGTGCAGCCATTACGACC
TGCCGCTGCAAGCCGACCACGCTCATTGCGCTGCCAGAAAGGGCCATGTG
CAGATGCTGCAGTGGCTGCGGGATCACGGCTGTTATTCTCCTGGGGACAC
GCAGGTTTGCCGCTTTGCCGCAGAGGGCGGGCAACTAGAAGCGCTGCAGT
GGCTGCGCCACACCGGCAGCGCCTGGGACGAGTCCACATACTGGGCTGCA
GCGGATCATGGACACCTGGAGCTGCTGCAGTGGGCGCGCGCCAATGACTG
CCCCTGGGACGCGGAGGTCTGCTCAAGAGCGGCATCAGGCGGGCACCTAG
CAGTGCTGCAGTGGGCTCACGCCCAAGGCTGTCGCTGGATAGAAGCCGGC
GACGGCCCAATGGATGTGTGCAGCTGCGCCGCACGGGGAGGGCACCTGGA
GGTGCTGCAGTGGGCGCGCGCCAACGGCTGTGCCTGGAACGAGCTGACCT
GCAGCTCAAGTGCCGTATTTGGGCATCTGGAGTGGGCGCGCGCCAACGGC
TGCCCCTGGGACGTGGGGACGTCCTGTTTCGCTGCGCAGGGAGGGCATCT
CGAGGTGCTGCAGTGGGCGCTCGCGGACGGCGCCCCCTGCGACGAGCGGC
TGTGCAGAGCCAAGCCCCACTACATAAAACAGGAGAGCGGCACACAGGTG
TGCGGGTGTGCTGCCGGGGCCGGGCAGCTGGAAGCGCTGCAGTGGCTGCG
TCGAACAGGCAGCGCCTGGGACGAAAGGACATGCCACGCTGCAGCGGCGC
ACGGACACTTGGAGGTAATGCAGTGGGGGCGCGCCAACGGCTGCCCCTGG
GACGAGGAAGTCTGCACAGAGGCGGCAAAAGGCGGGTACCTAGAGTGGCT
GCGCGCCAACGGGTGCCCCTGGAACTCGAAGACGTGCGACGAAGGCGCGG
AGGGTGGGCACCTGGAGGTGCTGCAGTGGGCGCGCGCCAACGGATGCCCG
CAAGCTGTGCACGCAGGGCGCCTCGAGATGCTGCAACTCGCGCGCGCTCA
CGGCTGCCCCTGGGACGCTTCCACCATGGAAGCTGCCAAGTCCGAGCAGC
GACCGGCGGAGCGCGCGGCAGCGCGCGGAGCGGCAGCGGAGCCCAAGTCC
CCCGCAACATTCTGCTACAAATGCTGCGACGAGTTTGGCAAGTACCACTG
CGTGCACGCCGACTACAACGCCTGCGGCCTCTTCGGACCCCAGCTGGTGC
CCGCAGACGAGACAACGGGACTGCACTGCGTGGACTGCGACAGCACAATC
CCTTATCTGGCAAAGGCATGCATTCAGAACCCCAGCTTCGAAGGCGACGA
CAGCACAACAGACCTGTACCGCCTGGACAGAGCAGACAATGCAGCCAAGT
ACATCCACAAGGCCTGCTATGATGCACGCAAAGAATATGCCACCTCGCGC
ATCATCGCGTTCTTCAAGTCCAAGCAGCAGCAGAAGAGGCGCTCGACATC
AACAGCAAGTGACGAACCAGAACCAGCAGACAAGCGCCAGCGTGTGGCGT
AAACACACAAATCCAGCAAGTCCGGATAGCGAGGCCATATAGAGCATTCG
GTACATAGTCAACAACATCAGCAACCCATACTGCACATACATGTACAACT
ACTAGCTTCATCCGTTCTGCAATGCACAACAAGCTCCATCCATTTTCACA
CAGGATACGTGCGACATACACATACATGTAATAAATGGGCTTCACAC

protein sequence of jgi.p|Trimin1|350945

>Trimin1|350945|estExt_Genemark1.C_Ctg_760002 ID=Trimin1|350945|estExt_Genemark1.C_Ctg_760002|Name=jgi.p|Trimin1|350945|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=684bp
MEVCSFAAEGGQLEALQWLRRTGSAWDEYTCWAAARHGHLELLQWAHANG
CPWNSTVCSWAASGGQLAVLRWARAQGCPWNEGVCSGAAEAGHLEVLQWA
RANGCPWDKRTCFAAAKRGDLQMLQWLPAERAHLEVLQWARASSCPWDLR
TCWLAAEEGHLEVLRWALANGAPCNERLCSHYDLPLQADHAHCAARKGHV
QMLQWLRDHGCYSPGDTQVCRFAAEGGQLEALQWLRHTGSAWDESTYWAA
ADHGHLELLQWARANDCPWDAEVCSRAASGGHLAVLQWAHAQGCRWIEAG
DGPMDVCSCAARGGHLEVLQWARANGCAWNELTCSSSAVFGHLEWARANG
CPWDVGTSCFAAQGGHLEVLQWALADGAPCDERLCRAKPHYIKQESGTQV
CGCAAGAGQLEALQWLRRTGSAWDERTCHAAAAHGHLEVMQWGRANGCPW
DEEVCTEAAKGGYLEWLRANGCPWNSKTCDEGAEGGHLEVLQWARANGCP
QAVHAGRLEMLQLARAHGCPWDASTMEAAKSEQRPAERAAARGAAAEPKS
PATFCYKCCDEFGKYHCVHADYNACGLFGPQLVPADETTGLHCVDCDSTI
PYLAKACIQNPSFEGDDSTTDLYRLDRADNAAKYIHKACYDARKEYATSR
IIAFFKSKQQQKRRSTSTASDEPEPADKRQRVA*

mRNA from alignment at Contig_76:5293..13489-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_11321 ID=mRNA_11321|Name=jgi.p|Trimin1|350945|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8197bp|location=Sequence derived from alignment at Contig_76:5293..13489- (Tribonema minus UTEX_B_3156 )
ATGGAGGTTTGCAGCTTTGCCGCAGAGGGAGGGCAACTAGAAGCGCTGCA
GTGGCTGCGCCGCACCGGCAGTGCCTGGGACGAGTACACATGCTGGGCTG
CAGCGCGTCATGGACACTTGGAGCTGCTTCAGTGGGCGCACGCCAACGGC
TGCCCCTGGAACAGCACGGTCTGCTCATGGGCGGCATCAGGCGGGCAGCT
AGCAGTGCTTCGGTGGGCCCGCGCCCAAGGCTGCCCCTGGAATGAGGGGG
TCTGCTCAGGGGCAGCGGAAGCCGGGCACCTAGAGGTGCTGCAGTGGGCG
CGCGCCAACGGCTGCCCCTGGGACAAGCGCACCTGCTTTGCTGCTGCCAA
GCGAGGGGACTTGCAGATGCTGCAGTGGCTTCGTGCCAATGAATGCCCCT
GGGACGCGTCGACTTGCTTCGCAGCTGCCTCAAGAGGTCATCTTGAGGTG
CTGCAGTGGGCACGTGCCCATGGCTGCCCCTGGGACTCAAGGACATGCAC
AGAAGCTGCCAGGGGAGGACACCTCGAGGTGCTACAATGGGCGCACGCCA
ACGGGTGCCCCTGGAGTGATGCAACATGTGCCGCAGCTGCGGAGCGGGCG
CATCTTGAGGTGCTGCAGTGGGCGCGCGCCAGCAGCTGCCCCTGGGACCT
GCGAACCTGCTGGCTCGCTGCCGAGGAAGGGCACCTCGAGGTGCTGCGGT
GGGCGCTCGCGAACGGCGCCCCCTGCAACGAGCGGCTGTGCAGGTATGCT
GCGCAGACAGGGCGGTTTGAGGTGCTGCAGCTTGCTCGCGCTCACGGCTG
CCCCTAGGATGCTTCCACGATAGTGCTTGCCGCATCCGAGGAGATAGCGG
AGTGGGCGTGTGCCAATGGTTGTCCAGAGCCAAGCCCCGCTGCGTATGTG
GCACACAGGTTCTACCAGCATGTAGTCTAGTAGTTGCAGCCCCACTACAT
GCTGTTGGAGAGCTTTGCTCAGGCACGACTTGTACTAGTAGGTAGCTGCA
GAAAGCGCAAACTCAAGCGGCAGCGCGACAGGCGGCAGAGACAGCGTACT
GCACAGACAAGTGCATGTGCGCCTGTGCGCAGAAGTCTCAGCAAAGGGTA
CTTGCATATGCTTCTATGTAGACTTCAAAGACTTCAAGGCATTGAGCTGC
CAAGTGTGTGTGGGTGCCTCTCAGTCATGGTTCTGAGGTCGCGAGCGCAT
CGCGTCTGCAGTACATGCATGAGTTCTAATGGTGCTCTAGATGCTATGAG
CAGCAGGGCATGTTAATGGGTTGACATGCGCACCTGGTGACTGGCCTACT
GCTTTTTGCTGCTTGCCTAATCCTCTGTGTACGTGCCTGCTGAGCATGGT
AGCAGCGTACAGATGTGAAATTTGCATCAGCGTTGTGCTTCGATCATGTT
CGCTTGGGGCGCGACAGGCCACGCATCTCAGGTTGATGTGCACTCCATGC
AGCACCCTTGTTCCGCGAAGAGAGGCTCAACCGCAAACAGGCATCCCCCT
CTTCCCACCGGCGCCAACACCCCAGTGGTGACCCACAACCAAACCCTACT
TTTAAGTTAGGGCTGCCCAGCCACGAGCTCACTTGATGTTGAGGTGCAGT
CGACCATCACTGTTGCACTCATGGGCAGTCTGCGTGCTGACTTGATGCCC
ATCAGGTATGTGCATATGAGACAGCATGACACAGTCAATCACTGTTGCGT
GTCTGTTGGTGATTCATCAGCCATGAGTCATCTGCGAGCACACCATGCCT
ATGACAATTGCTCCAATGCAGTAGTATGTAATGCATGCCAGGACCTCGAG
TGGGAACGATGGATCGGCGCTTATAACACTCTGCAACTGAGAAGCTTGAG
ATAAAAGTCTGGCGAAAACTTTAAGAGCTTGAAGTGAAGTTGCCGGTCAT
CATTGACTCCTCAGCACACGTGTGCCACCTGTGTACGGGTGAACTGAAAA
TCACTTCAGTACAGCAGAACTTCATGATCATGAAGTGGAAGTTTGAAATT
TCATGTTGAAGTTTTTCTCAAAACACAGTCAGCCGAACGCACAGTCCAGC
TGAGCGCAGCCACAATCAGGCAGTAGACACAACATGGCGAAGCGGCAGCA
CAGCACTAGTGAGAGCCCCATCCTAGATGCTGCTCTTGCCCCCCACATCC
TGGCCTTTCTACGGCCGTCCCTCATGCTCAGGAGCACATGCCGGGCTTTC
AATTGGCTATCGAGAGCCACGAAGATCTGGAAAAACACCACACATTAACG
CAAGAGATCCTGTCTTGCATCACTCTGCTCCGCTGGGCCGTAGCCAATGG
CATGAGCCCACAGTTGGCGCACAAGTCCTGCAACAGGCGTGGCGACCGCG
AAGCACTGCTGCTGCGCCGCAGCCATTACGACCTGCCGCTGCAAGCCGAC
CACGCTCATTGCGCTGCCAGAAAGGGCCATGTGCAGATGCTGCAGTGGCT
GCGGGATCACGGCTGTTATTCTCCTGGGGACACGCAGGTTTGCCGCTTTG
CCGCAGAGGGCGGGCAACTAGAAGCGCTGCAGTGGCTGCGCCACACCGGC
AGCGCCTGGGACGAGTCCACATACTGGGCTGCAGCGGATCATGGACACCT
GGAGCTGCTGCAGTGGGCGCGCGCCAATGACTGCCCCTGGGACGCGGAGG
TCTGCTCAAGAGCGGCATCAGGCGGGCACCTAGCAGTGCTGCAGTGGGCT
CACGCCCAAGGCTGTCGCTGGATAGAAGCCGGCGACGGCCCAATGGATGT
GTGCAGCTGCGCCGCACGGGGAGGGCACCTGGAGGTGCTGCAGTGGGCGC
GCGCCAACGGCTGTGCCTGGAACGAGCTGACCTGCAGCTCAAGTGCCGTA
TTTGGGCATCTGGAGGTGATGCAGTGGCTTCGTGCCAATGGTTGCCTTTG
GAACACGTCGACTTGCTTTGCTGCTGCCTCAAGAGGCCATCTTGAGGTGC
TGCAGTGGGCACGCGCCCATGGCTGCCCCTGGGGCTCAAGGACATGCACA
GAAGCTGCCAGAAGAGGACACCTCGAGGTGCTACAATGGGCGCGCGCCAA
CGGGTGCCCCTGGAATGGCGGAATATGCAACGTAGCTGCGCTGGGGGGGC
ACCTTGGCGTGCTGCAGTGGGCGCGCGCCAACGGCTGCCCCTGGGACGTG
GGGACGTCCTGTTTCGCTGCGCAGGGAGGGCATCTCGAGGTGCTGCAGTG
GGCGCTCGCGGACGGCGCCCCCTGCGACGAGCGGCTGTGCAGGTACACTG
CGGAGGCACGGCGCCTTGACATGTTACAATGTGCGCGCGCTCACGGGTGC
CCCTGGGACGCTTCCACAATAGTGTTTGCCGCGTCCAAGGAGACAGCGGA
GTGGGCGCGCGCCAATGGTTGCCCAGAGCCAAGCCCCACTACATAAAACA
GGAGAGCGGCACACAGGTACCGCAAGTAGCTGCAGCCCCGCTCTATGCTA
GTAGAAAAACGGTGTTCAGGCACTACTTGTGCTGGTACCTGCAGAAAGAG
CGAAGTCAGGCATAAGTGCAGGCAGCAAAGACAGCGCTCTGAATCATGAG
CAACATGTACTTGACAGACGAATGTGTGTGCGCCTGCGCGCAAAAGTCGC
AGCAACAGTGACTCACAAATATATAGATATCAAATTTCAGAATGATGTGT
TGCCCCAAGTGCCACTGTGCTTGTACGCGCCTCTCAGTCACGATTCTCAT
GTCGTGACGCACCGTGTCTGCGTGCATGAGTTGACATTGTGCTCCAGATA
CTATGAGCAGCAGGGCATGGCCTACTGCTTTCTGCTGATTGTGTGTGCTG
TCTTGATGCCCATCGGGTTGTGCAAATGAGACAGCACGACACAGCCGATC
AGTGTTGTGCTTGCACATGGACCTCTGTTTGTGTTGCTTGAGCCGTGAGT
CATCTGCGAGCACACCACGCCTACCTATGCCGATTGCTCCAATACTACAT
AGCAGCATGTGGTGCATGCCAAACTAACTTCGGGGGAAATGATGGAATGC
GCTTCACTTCCTGCAACTGAGAAGCTTGATACAACTCTGTGTCAAAACAA
GTTGAAGAAAACTTCAAGAGCTTGAAGTTTAGTTTGAAGTTCTTGCTTGA
AGTTTTTTTTTTCGTGAAAAAAGCCGCCGGAGCGCAGCACAGTCCAGCTG
AGCGCGTCCACCATCAGGCAGTAGACACAGCATGGCGAAGAGGCAGCACA
GCACTAGTGAGAGCCCCCTTCTGGATGCCTCTCTTGCTCCTCACATACTG
GCCTTTCTGCGTCCGTCCCTCATGCTCAGGAGCACATGCTGGGCTTTCAA
TTGCGCTATCGAGAGACGCGCAACCCCAGACAAGCATCGGACAGTGGCAC
AGGAAGCCACTTCCAGCATCAGTTTGCTCCGCTGGGCCATACGGAGCGGC
TTAGGCCTGAAAATGGCGCAGAACTCATGCATCAGCCGTGGCGACCTAGA
TGAACTGCTGCTGCTGCGCAGCCGCTACAAGCCGAAGTTGCGAGCAGCAC
ACGCTCACCGCGCTGCCAAGAACGGGAATGTGCGGATGCTGCACTGGCTG
CGACAGCACGGCTGCCTTTCTCCTGCTGACGAGCAGGTGTGCGGGTGTGC
TGCCGGGGCCGGGCAGCTGGAAGCGCTGCAGTGGCTGCGTCGAACAGGCA
GCGCCTGGGACGAAAGGACATGCCACGCTGCAGCGGCGCACGGACACTTG
GAGGTAATGCAGTGGGGGCGCGCCAACGGCTGCCCCTGGGACGAGGAAGT
CTGCACAGAGGCGGCAAAAGGCGGGTACCTAGAGGTGCTGCAGTGGCCCG
CGCGAACGGCTGCCCCTGGGATGCATCCGTGTGCAGCAATGCCGCGATGT
ACGGGCACCTGGGGGTATTGCAGTGGGCGCAAGCTAACGGGTGCCCTTGG
CACGAGCGGACATGCATAATTGCTGCCGAACGAGGGGACCTTCCGATGCT
GCCAGTGGGCACGCGCCCATGGCTGCCCCTGGAGCACGGAAACGTGCTCC
TCTGCTGCGCATATCGGACACCTGGAGATGCTGCAGTGGCTGCGCGCCAA
CGGGTGCCCCTGGAACTCGAAGACGTGCGACGAAGGCGCGGAGGGTGGGC
ACCTGGAGGTGCTGCAGTGGGCGCGCGCCAACGGATGCCCGTGCAGCGAA
CGCACATGCGTCAATGCTGAGTGGGGGGGACACCTTGAGGTGCTGCAGTG
GTTGCTCACTAACGGCGCTCCCCGCTCAGAGCGCCTCTGCAGGCAAGCTG
TGCACGCAGGGCGCCTCGAGATGCTGCAACTCGCGCGCGCTCACGGCTGC
CCCTGGGACGCTTCCACCATGGAAGCTGCCAAGTCCGAGCAGGTAGCGGA
GTGGGCGCGTGCCAACAATTGCCCCAGGCCGGACCCCGCTGCTGCTCGTA
CGGTTCCTTGGGCACCGGAATTCACGTACTGGCTGGACTTGATTTTGTAA
AGGCCCCAATGGAGGCTGGGCGTCCGGTGTGTTTTTAGCTTTGATACTTG
TAGCGCGCAGTTTGGCAGCAGCACGGAGTCAGGCGGCACAAAGAGCGCTT
GTGACTATGTGCACGGAGCGTCGCAGCAAGAGCAAGCTGCACATATGTAT
ATATAGACATCGGATAATAAGCATGGAAGTACTGTCTGTTGTTGATGCCC
TATGAGTCATCTCGAGTTGCTCGGTCATAGCGGGACAGGCGCGCCGTGAG
CGCACCGCGCCTGCATGCATGAGTTGTAACCGTGCTCCAGGTATGGCGAG
CAGCAGGGCATGCCAGGAGCTTGATGTGCGCAACGGGTGAGTGAGCTACC
CCTTTCCTCTGTATTGCCTGACCTGGTGTCGTACGTGCGTGTCTGCTGCG
CATCAAACAACGCACAGTCAGCTGAGCAGTGAGATTTGTATCAGCGTGGT
ATGATCAGTTTGAAGTTGCAGTCAACCAGTTTGCCATTGCTGTTGCACAC
ATGAGATGTCTGCGCGCTGTCTTGATGTAGCATCAAGTACGTACATATGA
TGCAACTTGTACACGCCAATCGCTGTTGCACGCGGTTGAATCTGGACCTC
CACACTTGGCATTGCTGGAGACTGCAAGTGTGTCGGCTTGTGAGTCGTGA
GACACGAGTCACTTGATGTTAAAAGAGGATGCCTCGAGGACTCCATGCCG
GCGTGTGCCTTGGCTCCAATACTCATATGAGTGCATGGCGAGACCTGAAC
AGGCATACACGAGGGAGTGGGTCAGTTTCTTGCTGTTTGCCTGGCGTTCA
GTGATTGTCTGATTGCGTGTTCGATGAGTGCAGCTACTCTGTTCAGCAGC
AACGCATGTTTGGTTTTCAGAAGGTGCCTGAAAGGGCCAGGTGGAACTTT
CTAGTGGTCGTATTGCTTACGCAATGCGGTCTGCACACTGTGTTCGTGTG
TGCGCCAGTGCCTGCTGCAGGAAAGCAAACACTCGCCAACTGCTTACACA
AAGTGTCAACATGAACAATCGCAGGCTGCACTGCTTTGTAGCGAGCGACC
GGCGGAGCGCGCGGCAGCGCGCGGAGCGGCAGCGGAGCCCAAGTCCCCCG
TCCCCCCCCGGCCTGGGCTCTAGCCCGCTCTACCGCTCTACCGGCCCTCG
AAAGCTAGGAGTTTGGTCACGGGCTCTGGCGAGCGGCTGCCTGAGCGCCG
GCGGAGGCGGCTGGGGTGACTTTGGCGTGGCTGCATTATGCACAGGATTT
TCGAGCTGGTGCGCTGCTTCTCTCCGCGTCGTCCGGAAGCGGCGTTTTTC
ATTATTTTGAGCAAAACAGAGAAACCAGAGGGCCCTGCTTGCTGCAGCTT
GCCTTGCGAGGGAGACTTTGGCGTGGCACTGGCCTTTTTGGTGTATTGCT
GGAGGGTGGCGAGAGTCCGGACGCAGCTCGCTGCAGCGTGGCGGGAGAAC
GGAGTTTTGAGTGCTTCCGCAGTGACCTAAGGTTGGTGTTGTCACTGCTT
GCCTGTCTATGGTGTATCCGGCCTTGCAGGCGCAGGCCGAGCTGCAGCTG
TGCTGCCTAGCAGCGTGTGTCCGCATTGCCTCGTGTCCAGAGGGGCGGGT
TTTATATCGTTCGCTTGCGCTAGCGCTGTGTGCAATGACGTCTGGCAGCT
GCAGCAGCGTAGCCGAGGCACCGACTTGCATGCCAGGGCCTCATTGCCCT
GACAACACCATGCACAGCTAGCCAGCGCTGCCGCTCCACGCCATAGAGCA
ACACATGCTTGGCGCCACTAGGCCACATGAGAAGATTGGCGGGGACCCTC
ACGGGGTCTGGAAGACATAGGCAGCCCCCGTCGGAGTGAATGCCAGTAGC
CTTCGCCTATTGCTACGACACTGTCGCACAGCAGCACGCTGCTAGCGTCT
CGTCCCGCTTGCTTGGCTGTGTGTTGGAAGCTTTCTCCATAGTGGCAGTT
AGCATTTTTACTCTATGGACCCAGCACGGAACCATTGCTCAGGCTACGCC
TTCGTGCAACATGGTCTTAGACGCTAGTGATGCCCACCTTGTATTGCTGG
CCATGCTCGCTCCCTCGCCAGCCCTTGCTCTCTCTGCCTTCATCAATGAT
TTGACACCTGCAAACGCAAACATATTAACCATACAACGTTTCTTTGCACG
CAGGCAACATTCTGCTACAAATGCTGCGACGAGTTTGGCAAGTACCACTG
CGTGCACGCCGACTACAACGCCTGCGGCCTCTTCGGACCCCAGCTGGTGC
CCGCAGACGAGACAACGGGACTGCACTGCGTGGACTGCGACAGCACAATC
CCTTATCTGGCAAAGGCATGCATTCAGAACCCCAGCTTCGAAGGCGACGA
CAGCACAACAGACCTGTACCGCCTGGACAGAGCAGACAATGCAGCCAAGT
ACATCCACAAGGCCTGCTATGATGCACGCAAAGAATATGCCACCTCGCGC
ATCATCGCGTTCTTCAAGTCCAAGCAGCAGCAGAAGAGGCGCTCGACATC
AACAGCAAGTGACGAACCAGAACCAGCAGACAAGCGCCAGCGTGTGGCGT
AAACACACAAATCCAGCAAGTCCGGATAGCGAGGCCATATAGAGCATTCG
GTACATAGTCAACAACATCAGCAACCCATACTGCACATACATGTACAACT
ACTAGCTTCATCCGTTCTGCAATGCACAACAAGCTCCATCCATTTTCACA
CAGGATACGTGCGACATACACATACATGTAATAAATGGGCTTCACAC

Coding sequence (CDS) from alignment at Contig_76:5293..13489-

>mRNA_11321 ID=mRNA_11321|Name=jgi.p|Trimin1|350945|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2052bp|location=Sequence derived from alignment at Contig_76:5293..13489- (Tribonema minus UTEX_B_3156 )
ATGGAGGTTTGCAGCTTTGCCGCAGAGGGAGGGCAACTAGAAGCGCTGCA
GTGGCTGCGCCGCACCGGCAGTGCCTGGGACGAGTACACATGCTGGGCTG
CAGCGCGTCATGGACACTTGGAGCTGCTTCAGTGGGCGCACGCCAACGGC
TGCCCCTGGAACAGCACGGTCTGCTCATGGGCGGCATCAGGCGGGCAGCT
AGCAGTGCTTCGGTGGGCCCGCGCCCAAGGCTGCCCCTGGAATGAGGGGG
TCTGCTCAGGGGCAGCGGAAGCCGGGCACCTAGAGGTGCTGCAGTGGGCG
CGCGCCAACGGCTGCCCCTGGGACAAGCGCACCTGCTTTGCTGCTGCCAA
GCGAGGGGACTTGCAGATGCTGCAGTGGCTTCCTGCGGAGCGGGCGCATC
TTGAGGTGCTGCAGTGGGCGCGCGCCAGCAGCTGCCCCTGGGACCTGCGA
ACCTGCTGGCTCGCTGCCGAGGAAGGGCACCTCGAGGTGCTGCGGTGGGC
GCTCGCGAACGGCGCCCCCTGCAACGAGCGGCTGTGCAGCCATTACGACC
TGCCGCTGCAAGCCGACCACGCTCATTGCGCTGCCAGAAAGGGCCATGTG
CAGATGCTGCAGTGGCTGCGGGATCACGGCTGTTATTCTCCTGGGGACAC
GCAGGTTTGCCGCTTTGCCGCAGAGGGCGGGCAACTAGAAGCGCTGCAGT
GGCTGCGCCACACCGGCAGCGCCTGGGACGAGTCCACATACTGGGCTGCA
GCGGATCATGGACACCTGGAGCTGCTGCAGTGGGCGCGCGCCAATGACTG
CCCCTGGGACGCGGAGGTCTGCTCAAGAGCGGCATCAGGCGGGCACCTAG
CAGTGCTGCAGTGGGCTCACGCCCAAGGCTGTCGCTGGATAGAAGCCGGC
GACGGCCCAATGGATGTGTGCAGCTGCGCCGCACGGGGAGGGCACCTGGA
GGTGCTGCAGTGGGCGCGCGCCAACGGCTGTGCCTGGAACGAGCTGACCT
GCAGCTCAAGTGCCGTATTTGGGCATCTGGAGTGGGCGCGCGCCAACGGC
TGCCCCTGGGACGTGGGGACGTCCTGTTTCGCTGCGCAGGGAGGGCATCT
CGAGGTGCTGCAGTGGGCGCTCGCGGACGGCGCCCCCTGCGACGAGCGGC
TGTGCAGAGCCAAGCCCCACTACATAAAACAGGAGAGCGGCACACAGGTG
TGCGGGTGTGCTGCCGGGGCCGGGCAGCTGGAAGCGCTGCAGTGGCTGCG
TCGAACAGGCAGCGCCTGGGACGAAAGGACATGCCACGCTGCAGCGGCGC
ACGGACACTTGGAGGTAATGCAGTGGGGGCGCGCCAACGGCTGCCCCTGG
GACGAGGAAGTCTGCACAGAGGCGGCAAAAGGCGGGTACCTAGAGTGGCT
GCGCGCCAACGGGTGCCCCTGGAACTCGAAGACGTGCGACGAAGGCGCGG
AGGGTGGGCACCTGGAGGTGCTGCAGTGGGCGCGCGCCAACGGATGCCCG
CAAGCTGTGCACGCAGGGCGCCTCGAGATGCTGCAACTCGCGCGCGCTCA
CGGCTGCCCCTGGGACGCTTCCACCATGGAAGCTGCCAAGTCCGAGCAGC
GACCGGCGGAGCGCGCGGCAGCGCGCGGAGCGGCAGCGGAGCCCAAGTCC
CCCGCAACATTCTGCTACAAATGCTGCGACGAGTTTGGCAAGTACCACTG
CGTGCACGCCGACTACAACGCCTGCGGCCTCTTCGGACCCCAGCTGGTGC
CCGCAGACGAGACAACGGGACTGCACTGCGTGGACTGCGACAGCACAATC
CCTTATCTGGCAAAGGCATGCATTCAGAACCCCAGCTTCGAAGGCGACGA
CAGCACAACAGACCTGTACCGCCTGGACAGAGCAGACAATGCAGCCAAGT
ACATCCACAAGGCCTGCTATGATGCACGCAAAGAATATGCCACCTCGCGC
ATCATCGCGTTCTTCAAGTCCAAGCAGCAGCAGAAGAGGCGCTCGACATC
AACAGCAAGTGACGAACCAGAACCAGCAGACAAGCGCCAGCGTGTGGCGT
AA