Trimin1|350938|estExt_Genemark1.C_Ctg_750090 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350938
Unique NameTrimin1|350938|estExt_Genemark1.C_Ctg_750090
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length128
Homology
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BLAST of jgi.p|Trimin1|350938 vs. uniprot
Match: A0A835YLP5_9STRA (Copper transport protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLP5_9STRA)

HSP 1 Score: 256 bits (655), Expect = 1.360e-86
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 
Query:    1 MQAPTFEWSCTPGAILFSAWEFEGCYMFAEFLLPPQEVEWEHRYGSLGQGPQRGGSADTDNQNPLLPLLLTGLISALGLMSMLIAMTFNAGLFISLVAGEVVGGALWRGAAGGRGGGHMRGASFELV 127
            MQAPTFEWSCTPGAILFSAWEFEGCYMFAEFLLPPQEVEWEHRYGSLGQGPQRGGSADTDNQNPLLPLLLTGLISALGLMSMLIAMTFNAGLFISLVAGEVVGGALWRGAAGGRGGGHMRGASFELV
Sbjct:    1 MQAPTFEWSCTPGAILFSAWEFEGCYMFAEFLLPPQEVEWEHRYGSLGQGPQRGGSADTDNQNPLLPLLLTGLISALGLMSMLIAMTFNAGLFISLVAGEVVGGALWRGAAGGRGGGHMRGASFELV 127
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350938 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YLP5_9STRA1.360e-86100.00Copper transport protein n=1 Tax=Tribonema minus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007274Ctr copper transporterPFAMPF04145Ctrcoord: 59..106
e-value: 2.1E-8
score: 34.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_75contigContig_75:622175..623253 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350938mRNA_7678Tribonema minus UTEX_B_3156 mRNAContig_75 622175..623253 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350938|estExt_Genemark1.C_Ctg_750090 ID=Trimin1|350938|estExt_Genemark1.C_Ctg_750090|Name=jgi.p|Trimin1|350938|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=128bp
MQAPTFEWSCTPGAILFSAWEFEGCYMFAEFLLPPQEVEWEHRYGSLGQG
PQRGGSADTDNQNPLLPLLLTGLISALGLMSMLIAMTFNAGLFISLVAGE
VVGGALWRGAAGGRGGGHMRGASFELV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007274Cop_transporter