Trimin1|350869|estExt_Genemark1.C_Ctg_740061 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350869
Unique NameTrimin1|350869|estExt_Genemark1.C_Ctg_740061
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length887
Homology
BLAST of jgi.p|Trimin1|350869 vs. uniprot
Match: A0A835YKB0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKB0_9STRA)

HSP 1 Score: 1461 bits (3782), Expect = 0.000e+0
Identity = 886/886 (100.00%), Postives = 886/886 (100.00%), Query Frame = 0
Query:    1 MSEERTCCCVSGTASGSGTARRANISVDAPYKRXXXXXXXXXXXXXXXXXXXXXLAGGTVDAKGLCVPESKRRAYATILGHAEHVLGPRVLLQSLRDAGVEADLVVLLAADRADAWATTAALEGDGIKVHLVQPEELVRARGWLSTTLGSGHALADASLKSHLWSLTQYDRVVFLNSRALVLKNPDTLFACDGFCAPMTGEEGASTFSTDVMVLEPSAEVHGALLSRLGEAAAQAVPPSDAAALLGPALLPAATRARCSTFEDLEXXXXXXXXXXXXXXXXXXXXSGPILVLNAAHMPVCGGGAARSAPGTCHRLPYTYAAPSADLDGSGRWRGGAVADRLGRDVAAEPHVVRFSDAHAPWHAAQNLGTQLFWRWNGHRVRLAELGSGXXXXXXXXXPLLLPCALLLMACVQMWPPGSAVARKRAKSLSPAPSDCCLLPLVRCNSGTLAKGKGPAGWAARAAPPACAAAFAVAWYALAARWSAXXXXXXXXXXXXXXXXXXXXAAALVAGLHAMVYAHYVAATRARTLLRDALLSGAVLSAAALAWRAVPAARAAAAAAPTGLGMCAATAAHCLGALHAGRRRRCAGGGATQVHLIGVLGTCAASALAMVLLTFAAATSPPRAWLFTAVAAARAAATVAIYVAPYAQALVQQCRQRLCAAARWAPAARSPAGKGGRGTXXXXXXXALHALVHHWELLIAAAALCWVAAPLAWELRRRADADAAPAAAAAALRYQLFHDACLASDAGYAGVGRGLAAACGAAQTFRPSVTADGALCLRAADGRFLTPLRGKLLDECAPHARFRVLLPGAAAAGDGGXXXXXTLPVXXYPRXXXXXXXXXXXXXXXXXXXGAAFCLYNAETGLYLSSARHPQPLCRRTEHWRITLWEL 886
            MSEERTCCCVSGTASGSGTARRANISVDAPYKRXXXXXXXXXXXXXXXXXXXXXLAGGTVDAKGLCVPESKRRAYATILGHAEHVLGPRVLLQSLRDAGVEADLVVLLAADRADAWATTAALEGDGIKVHLVQPEELVRARGWLSTTLGSGHALADASLKSHLWSLTQYDRVVFLNSRALVLKNPDTLFACDGFCAPMTGEEGASTFSTDVMVLEPSAEVHGALLSRLGEAAAQAVPPSDAAALLGPALLPAATRARCSTFEDLEXXXXXXXXXXXXXXXXXXXXSGPILVLNAAHMPVCGGGAARSAPGTCHRLPYTYAAPSADLDGSGRWRGGAVADRLGRDVAAEPHVVRFSDAHAPWHAAQNLGTQLFWRWNGHRVRLAELGSGXXXXXXXXXPLLLPCALLLMACVQMWPPGSAVARKRAKSLSPAPSDCCLLPLVRCNSGTLAKGKGPAGWAARAAPPACAAAFAVAWYALAARWSAXXXXXXXXXXXXXXXXXXXXAAALVAGLHAMVYAHYVAATRARTLLRDALLSGAVLSAAALAWRAVPAARAAAAAAPTGLGMCAATAAHCLGALHAGRRRRCAGGGATQVHLIGVLGTCAASALAMVLLTFAAATSPPRAWLFTAVAAARAAATVAIYVAPYAQALVQQCRQRLCAAARWAPAARSPAGKGGRGTXXXXXXXALHALVHHWELLIAAAALCWVAAPLAWELRRRADADAAPAAAAAALRYQLFHDACLASDAGYAGVGRGLAAACGAAQTFRPSVTADGALCLRAADGRFLTPLRGKLLDECAPHARFRVLLPGAAAAGDGGXXXXXTLPVXXYPRXXXXXXXXXXXXXXXXXXXGAAFCLYNAETGLYLSSARHPQPLCRRTEHWRITLWEL
Sbjct:    1 MSEERTCCCVSGTASGSGTARRANISVDAPYKRXXXXXXXXXXXXXXXXXXXXXLAGGTVDAKGLCVPESKRRAYATILGHAEHVLGPRVLLQSLRDAGVEADLVVLLAADRADAWATTAALEGDGIKVHLVQPEELVRARGWLSTTLGSGHALADASLKSHLWSLTQYDRVVFLNSRALVLKNPDTLFACDGFCAPMTGEEGASTFSTDVMVLEPSAEVHGALLSRLGEAAAQAVPPSDAAALLGPALLPAATRARCSTFEDLEXXXXXXXXXXXXXXXXXXXXSGPILVLNAAHMPVCGGGAARSAPGTCHRLPYTYAAPSADLDGSGRWRGGAVADRLGRDVAAEPHVVRFSDAHAPWHAAQNLGTQLFWRWNGHRVRLAELGSGXXXXXXXXXPLLLPCALLLMACVQMWPPGSAVARKRAKSLSPAPSDCCLLPLVRCNSGTLAKGKGPAGWAARAAPPACAAAFAVAWYALAARWSAXXXXXXXXXXXXXXXXXXXXAAALVAGLHAMVYAHYVAATRARTLLRDALLSGAVLSAAALAWRAVPAARAAAAAAPTGLGMCAATAAHCLGALHAGRRRRCAGGGATQVHLIGVLGTCAASALAMVLLTFAAATSPPRAWLFTAVAAARAAATVAIYVAPYAQALVQQCRQRLCAAARWAPAARSPAGKGGRGTXXXXXXXALHALVHHWELLIAAAALCWVAAPLAWELRRRADADAAPAAAAAALRYQLFHDACLASDAGYAGVGRGLAAACGAAQTFRPSVTADGALCLRAADGRFLTPLRGKLLDECAPHARFRVLLPGAAAAGDGGXXXXXTLPVXXYPRXXXXXXXXXXXXXXXXXXXGAAFCLYNAETGLYLSSARHPQPLCRRTEHWRITLWEL 886          
BLAST of jgi.p|Trimin1|350869 vs. uniprot
Match: A0A835ZFA1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFA1_9STRA)

HSP 1 Score: 159 bits (403), Expect = 2.050e-36
Identity = 141/351 (40.17%), Postives = 181/351 (51.57%), Query Frame = 0
Query:   62 AKGLCVPESKRRAYATILGHAEHVLGPRVLLQSLR-DAGVEADLVVLLAADRADAWATTAALEGDGIKVHLVQPEELVRARGWLSTTLGSGHA-LADASLKSHLWSLTQYDRVVFLNSRALVLKNPDTLFACDGFCAPMTGEEGASTFSTDV--------------MVLEPSAEVHGALLSRLGEAAAQAVPPSDAAALLGPALLPAATRARCSTFEDLEXXXXXXXXXXXXXXXXXXXXSGPILVLNAAHMPVCGGGAARSAPGTCHRLPYTYAAPSADLD------------GSGRWRGGAVADRLGRDVAAEPHVVRFSDAHAPWHAAQNLGTQLFWRWNGHRVRLAE 384
            AK LCVP   RRAY T L   +H+LG RVL  +L+  AG  AD+VVL+  ++A+   T AALE DG++V +  PE   +AR   S   G+  A   DA LKS LW L++YDRV +L+  +L ++N D LF CDGFCA  +   GA+    DV              MVLEPSA VH A+  RL +A+A      D A+L+  AL     R+ C+ F  ++          XXXXXXXXXX    LVLNAAHMP+C GG+  ++  TC+ LP  Y A S                GSG            R  A EP ++RF+ A  PW AA      L W W   R  L E
Sbjct:   34 AKPLCVPPPSRRAYVTALMPGDHILGVRVLAHTLKLQAGAHADIVVLVWHEQANTE-TVAALEADGLQVLVAGPEP-AKAR---SGVYGASSAPFVDAYLKSQLWDLSEYDRVAYLSPASLAMRNADALFTCDGFCA--SASAGAAAPGDDVAVAALLAGVRGGGAMVLEPSAAVHAAMQQRLEDASAWEARQLDFASLVRAAL---PLRSYCAAFNWVDDFLQLKGSSGXXXXXXXXXXXA--LVLNAAHMPLCRGGSTGTSR-TCYSLPAEYDARSESAGTVTPQSLWGSNGGSGTSSSAGGDGSRRRLWADEPLLMRFAAAVRPWDAAALSSDPLAWHWQRVRATLRE 371          
BLAST of jgi.p|Trimin1|350869 vs. uniprot
Match: A0A6H5JRP3_9PHAE (GT8 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRP3_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 1.340e-33
Identity = 142/470 (30.21%), Postives = 181/470 (38.51%), Query Frame = 0
Query:   65 LCVPESKRRAYATILG----------------HAEHVLGPRVLLQSLRDAGVEADLVVLLAADRADAWATTAALEGDGIKVHLVQPEELVRARGWLSTTLGSGHALADASLKSHLWSLTQYDRVVFLNSRALVLKNPDTLFACDGFCA--------------PMTGEEGASTF------------------------------------------------------STDVMVLEPSAEVHGALLSRLGEAAAQAVPPSDAAALLGPALLPAATRA--RCSTFED--------------------------LEXXXXXXXXXXXXXXXXXXXXSG----------PILVLNAAHMPVCGGGAARSAPGTCHRLPYTYAAPSADLDGS-GRWRGGAVADRLGRDVAAEPHVVRFSDAHAPWHAAQNLGTQLFWRWNGHRVRLAELGSGXXXXXXXXXPLLLPCALLLMACV 411
            LC P    RAY T +                   + +LG RVL QSLR AG + D+VVL+  +RA    T  +L  DG+ V +V P+ L  A G + +         +   K  LWSLT YDRVVFL+ R+L+ KNPD LFAC+GFCA              P   +E  +                                                        ST VMVLEPS EVH A+L +L    A      +A   L   L+ A T A  RC+ FED                           E                     G          P+++LN  H+P C  G  R++ G C RLPYT+AAPS D  G    W GGA  D     V  EPH+V F+D   PW     L   LFW+WN +R +L E   G            +PC +L  A V
Sbjct:  155 LCSPAEGSRAYVTTIAAIGGGFGASGGSNGDKSGDRLLGARVLAQSLRSAGAKGDIVVLVPLERATG-PTLDSLRRDGLTVQIV-PKGLQSAGGEIVSE--------ELMTKVSLWSLTSYDRVVFLDPRSLIQKNPDALFACEGFCAAGAVHSPSSSPSFQPGWAQEAGAAVGAXXXXXXXXXXXXHGXXXXXXXXXXXXXXXXXXXXXXXXVLEKPLSVPPSWQPSTSVMVLEPSLEVHAAMLDKLTRTPAAGS--LEAQVFLSSFLMGAGTDAGDRCTQFEDPVENAPSDRGRSRGGGLVAGQGXXXXWEDEEAGGAIFQGDGGFGDAGVDGGGSFLEDALMPVVLLNGPHVPRCSAGRKRTSEGVCQRLPYTFAAPSTDFQGGKNSWGGGAQKDDR---VTPEPHIVHFADEDTPWKRLAYLHKPLFWKWNAYREQL-ECPYGNFFAPWVL--FFIPCVVLAFARV 606          
BLAST of jgi.p|Trimin1|350869 vs. uniprot
Match: UPI0012BB89A7 (glycosyltransferase family 8 protein n=1 Tax=Roseibium denhamense TaxID=76305 RepID=UPI0012BB89A7)

HSP 1 Score: 75.1 bits (183), Expect = 6.330e-11
Identity = 61/177 (34.46%), Postives = 82/177 (46.33%), Query Frame = 0
Query:   68 PESKRRAYATILGHAEHVLGPRVLLQSLRDAGVEADLVVL----LAA----DRADAWATTAALEGDGIKVHLVQPEELVRARGWLSTTLGSG---HALADASLKSHLWSLTQYDRVVFLNSRALVLKNPDTLFACDGFCAPMTGEEGASTF---STDVMVLEPSAEVHGALLSRLGE 230
            P   R AY T++ + ++++G   LL+SLR     ADLVVL    +AA    + A A A  A  E         +  E  R       T G     H   D  +K  LW LT+YD+VVF+++ ALVLKN D LF    FCA     EG   F   ++ V    PS      ++ RL E
Sbjct:   10 PAQSRTAYVTLVTNQDYLMGASALLRSLRQTQTTADLVVLATPGVAAGDLPELASAGARIAKCERLATSAQFNERHERGRLHKAAPFTKGGKPVFHTPLDNFVKLRLWQLTEYDKVVFIDADALVLKNCDRLFDYPEFCAAPNVYEGLGDFHRLNSGVFTATPSEATFADMMQRLDE 186          
BLAST of jgi.p|Trimin1|350869 vs. uniprot
Match: UPI002002FE4D (glycosyl transferase n=1 Tax=Roseibium sp. CAU 1639 TaxID=2933272 RepID=UPI002002FE4D)

HSP 1 Score: 73.9 bits (180), Expect = 1.420e-10
Identity = 61/173 (35.26%), Postives = 80/173 (46.24%), Query Frame = 0
Query:   72 RRAYATILGHAEHVLGPRVLLQSLRDAGVEADLVVLLAAD-RADAWATTAALEG-----DGIKVHLVQPEELVRARGWLSTTLGSG-----HALADASLKSHLWSLTQYDRVVFLNSRALVLKNPDTLFACDGFCAPMTGEEGASTF---STDVMVLEPSAEVHGALLSRLGE 230
            R AY T++ + ++VLG   LL+SLR +G  ADLVVL       D  A   A E      D +       E   R R   +     G     H   D  +K  LW LT+YD+VVF+++ ALVLKN D LF    FCA     E    F   ++ V    PS     A+L RL +
Sbjct:   14 RTAYVTLVTNRDYVLGATALLRSLRRSGTSADLVVLCTPGVDEDDLAVLKAFEPRLGRCDRLPTSDAFNERHERGRLHKAAPFTKGGKPVFHTPLDNFVKLRLWQLTEYDKVVFIDADALVLKNIDKLFGYPEFCAAPNVYESLKDFHRMNSGVFTAVPSEATFAAMLERLDQ 186          
BLAST of jgi.p|Trimin1|350869 vs. uniprot
Match: A0A5P9D144_9HYPH (Glycosyl transferase family 8 n=1 Tax=Labrenzia sp. THAF82 TaxID=2587861 RepID=A0A5P9D144_9HYPH)

HSP 1 Score: 73.2 bits (178), Expect = 2.440e-10
Identity = 61/175 (34.86%), Postives = 82/175 (46.86%), Query Frame = 0
Query:   70 SKRRAYATILGHAEHVLGPRVLLQSLRDAGVEADLVVLLA--ADRADAWATTAALEGDGIKVHLVQP----EELVRARGWLSTTLGSG-----HALADASLKSHLWSLTQYDRVVFLNSRALVLKNPDTLFACDGFCAPMTGEEGASTF---STDVMVLEPSAEVHGALLSRLGE 230
            S R AY T++ + ++VLG   LL+SLR  G EADLVVL     + AD  A  + +   G    L       E   R R   +     G     H   D  +K  LW L  Y+RVVF+++ ALVLKN D LF    FCA     EG + F   ++ V    PS     A+ + L +
Sbjct:   12 SARVAYVTLVTNQDYVLGATALLRSLRRTGTEADLVVLHTPGVEEADLTALESFMPRFGRCERLATSAAFNERHERGRLHKAAPFSKGGKPLFHTPLDNFVKLRLWQLRDYERVVFIDADALVLKNCDKLFEYPEFCAAPNVYEGLADFHRLNSGVFTARPSDATFSAMATALDQ 186          
BLAST of jgi.p|Trimin1|350869 vs. uniprot
Match: UPI0019D3A766 (glycosyl transferase n=2 Tax=Proteobacteria TaxID=1224 RepID=UPI0019D3A766)

HSP 1 Score: 72.4 bits (176), Expect = 3.590e-10
Identity = 56/171 (32.75%), Postives = 86/171 (50.29%), Query Frame = 0
Query:   72 RRAYATILGHAEHVLGPRVLLQSLRDAGVEADLVVL-LAADRADAWATTAALEGDGIKVHLVQPEELV-----RARGWLSTTLGSG-----HALADASLKSHLWSLTQYDRVVFLNSRALVLKNPDTLFACDGFCAPMTGEEGASTF---STDVMVLEPSAEVHGALLSRL 228
            ++AY T++ +A++ +G   L++SLR  G +ADLVV+      A+A    AAL    +   L+   +       RAR   +     G     H   D   K  LW LT+Y+RVVF+++ A+V++N D LF    F A     EG + F   ++ V V +PS     A+L RL
Sbjct:    3 KQAYVTLVTNADYAMGALALVRSLRLTGTDADLVVMHTGGTPAEALEPLAALGALLVPAELLPTSDAFNERHQRARLHANAPFTKGNKPAFHTPLDNFAKLRLWQLTEYERVVFIDADAVVVRNIDRLFGYPEFSAAPNVYEGLADFHRLNSGVFVAQPSQATFAAMLERL 173          
BLAST of jgi.p|Trimin1|350869 vs. uniprot
Match: A0A7S8EK20_9HYPH (Glycosyl transferase n=1 Tax=Mesorhizobium sp. NBSH29 TaxID=2654249 RepID=A0A7S8EK20_9HYPH)

HSP 1 Score: 72.4 bits (176), Expect = 3.750e-10
Identity = 57/174 (32.76%), Postives = 83/174 (47.70%), Query Frame = 0
Query:   70 SKRRAYATILGHAEHVLGPRVLLQSLRDAGVEADLVVLLAADRADAWATTAALEG------------DGIKVHLVQPEELVRARGWLSTTLGSGHALADASLKSHLWSLTQYDRVVFLNSRALVLKNPDTLFACDGFCAPMTGEEGASTF---STDVMVLEPSAEVHGALLSRL 228
            S+R AY T++ +A++  G   L++SL+ +G EAD+VVL      +      A  G            DG      Q E L  A  +      + H   D   K  LW +TQY+R VF+++ A+V+KN D LFA   FCA     E  + F   ++ V V  PSA    A+L +L
Sbjct:    2 SRRFAYVTLVTNADYAKGALALVRSLQHSGTEADIVVLHTGGATEQDLAPLAELGVLLLPADLLPTSDGFNQRH-QRERLHAAAPFTKGNKPAFHTPLDNFAKLRLWEMTQYERCVFIDADAVVVKNIDRLFAYPEFCAAPNVYESVADFHRLNSGVFVALPSAATFAAMLEKL 174          
BLAST of jgi.p|Trimin1|350869 vs. uniprot
Match: A0A0Q5VUG9_9HYPH (Glycosyl transferase n=2 Tax=unclassified Rhizobium TaxID=2613769 RepID=A0A0Q5VUG9_9HYPH)

HSP 1 Score: 72.0 bits (175), Expect = 5.640e-10
Identity = 58/169 (34.32%), Postives = 82/169 (48.52%), Query Frame = 0
Query:   74 AYATILGHAEHVLGPRVLLQSLRDAGVEADLVVL-LAADRADAWATTAALEGDGIKVHLVQ-----PEELVRARGWLSTTLGSG-----HALADASLKSHLWSLTQYDRVVFLNSRALVLKNPDTLFACDGFCAPMTGEEGASTF---STDVMVLEPSAEVHGALLSRL 228
            AY T++ +A++ +G + L +S+R  G  AD+VVL   A  A   A  AA +   I+  L+       E   R     +     G     H+  D   K  LW LT Y+R VF+++ ALVL+N D LFA   FCA     E  + F   ++ V V  PS E   A+L RL
Sbjct:    8 AYVTLVTNADYAMGAKALCRSIRRTGTRADIVVLHTPAVSAGMLAALAAFDVRLIETGLLPLSDAFDERHARRNVHAAAPFTKGRKPAFHSPLDNFCKLRLWQLTDYERCVFIDADALVLRNIDRLFAYPEFCAAPNVYESLADFHRMNSGVFVATPSEETFQAMLQRL 176          
BLAST of jgi.p|Trimin1|350869 vs. uniprot
Match: A0A1Q9AZP7_9HYPH (Glycosyl transferase n=2 Tax=Rhizobium oryzae TaxID=464029 RepID=A0A1Q9AZP7_9HYPH)

HSP 1 Score: 72.0 bits (175), Expect = 6.990e-10
Identity = 60/175 (34.29%), Postives = 87/175 (49.71%), Query Frame = 0
Query:   70 SKRRAYATILGHAEHVLGPRVLLQSLRDAGVEADLVVLLAADRADAWATTAALEGDGIKV----HLVQPEELVR--ARGWL--STTLGSG-----HALADASLKSHLWSLTQYDRVVFLNSRALVLKNPDTLFACDGFCAPMTGEEGASTF---STDVMVLEPSAEVHGALLSRL 228
            S   A+ T++ +A++ +G R LLQSLR  G +ADLVVL       A    A LE  G ++    HL   +   +  ARG L  +     G     H+  D   K  LW LT Y+RV+FL++  +VL+  D  FA   FCA     +  + F   ++ V V  PS +   A+L+RL
Sbjct:   16 SGNHAFVTLVTNADYAMGARALLQSLRQTGTKADLVVLHTGGVDGA--RLAPLEALGARLVACDHLPLSDAFNQRHARGALHGAAPFAKGRKPLFHSPLDNFCKLRLWQLTDYERVIFLDADTIVLRPIDRFFAYPEFCAAPNVYQSLADFHRLNSGVFVAAPSEDTFAAMLARL 188          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350869 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YKB0_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZFA1_9STRA2.050e-3640.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JRP3_9PHAE1.340e-3330.21GT8 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
UPI0012BB89A76.330e-1134.46glycosyltransferase family 8 protein n=1 Tax=Rosei... [more]
UPI002002FE4D1.420e-1035.26glycosyl transferase n=1 Tax=Roseibium sp. CAU 163... [more]
A0A5P9D144_9HYPH2.440e-1034.86Glycosyl transferase family 8 n=1 Tax=Labrenzia sp... [more]
UPI0019D3A7663.590e-1032.75glycosyl transferase n=2 Tax=Proteobacteria TaxID=... [more]
A0A7S8EK20_9HYPH3.750e-1032.76Glycosyl transferase n=1 Tax=Mesorhizobium sp. NBS... [more]
A0A0Q5VUG9_9HYPH5.640e-1034.32Glycosyl transferase n=2 Tax=unclassified Rhizobiu... [more]
A0A1Q9AZP7_9HYPH6.990e-1034.29Glycosyl transferase n=2 Tax=Rhizobium oryzae TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain Acoord: 71..381
e-value: 8.2E-21
score: 76.5
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 72..228
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 821..841
NoneNo IPR availablePANTHERPTHR11183GLYCOGENIN SUBFAMILY MEMBERcoord: 67..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_74contigContig_74:595852..598512 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350869mRNA_10577Tribonema minus UTEX_B_3156 mRNAContig_74 595662..598512 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350869|estExt_Genemark1.C_Ctg_740061 ID=Trimin1|350869|estExt_Genemark1.C_Ctg_740061|Name=jgi.p|Trimin1|350869|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=887bp
MSEERTCCCVSGTASGSGTARRANISVDAPYKRRRRRRQASPSLSSACII
VLLILAGGTVDAKGLCVPESKRRAYATILGHAEHVLGPRVLLQSLRDAGV
EADLVVLLAADRADAWATTAALEGDGIKVHLVQPEELVRARGWLSTTLGS
GHALADASLKSHLWSLTQYDRVVFLNSRALVLKNPDTLFACDGFCAPMTG
EEGASTFSTDVMVLEPSAEVHGALLSRLGEAAAQAVPPSDAAALLGPALL
PAATRARCSTFEDLEDFMDGLDGGGGGEAASAAGSSGPILVLNAAHMPVC
GGGAARSAPGTCHRLPYTYAAPSADLDGSGRWRGGAVADRLGRDVAAEPH
VVRFSDAHAPWHAAQNLGTQLFWRWNGHRVRLAELGSGGGGAAAVLLPLL
LPCALLLMACVQMWPPGSAVARKRAKSLSPAPSDCCLLPLVRCNSGTLAK
GKGPAGWAARAAPPACAAAFAVAWYALAARWSAGTAAAAASPAAAALVAH
AWLAAALVAGLHAMVYAHYVAATRARTLLRDALLSGAVLSAAALAWRAVP
AARAAAAAAPTGLGMCAATAAHCLGALHAGRRRRCAGGGATQVHLIGVLG
TCAASALAMVLLTFAAATSPPRAWLFTAVAAARAAATVAIYVAPYAQALV
QQCRQRLCAAARWAPAARSPAGKGGRGTAAAARAAALHALVHHWELLIAA
AALCWVAAPLAWELRRRADADAAPAAAAAALRYQLFHDACLASDAGYAGV
GRGLAAACGAAQTFRPSVTADGALCLRAADGRFLTPLRGKLLDECAPHAR
FRVLLPGAAAAGDGGSGGAETLPVLPYPRSGGSGGNGGGGGSSGGGGNGA
AFCLYNAETGLYLSSARHPQPLCRRTEHWRITLWEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans