Trimin1|349859|estExt_Genemark1.C_Ctg_500068 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|349859
Unique Name	Trimin1\|349859\|estExt_Genemark1.C_Ctg_500068
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	243

Homology

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BLAST of jgi.p|Trimin1|349859 vs. uniprot
Match: A0A835YTA4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTA4_9STRA)

HSP 1 Score: 429 bits (1103), Expect = 4.060e-151
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0

Query:    1 MLAFAAARDSSSSKRHIKLSTRLQQSLIADPTTPAPRPXXXXXXXXXXXXXXXXXXXXXXXLIQSWEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQRARDALIQLYESVGMTGGGARWQRRRHFGKKSGTARGEVGTPLDNDDSIHWACECSPDIEHVGAADANVHWRSFDSEAASEENKGKLILPKHHDKKTGCTKSVHPTRPEELPADLRTEDKWIRYFAASAALGAYKTKMSLGR 242
            MLAFAAARDSSSSKRHIKLSTRLQQSLIADPTTPAPRPXXXXXXXXXXXXXXXXXXXXXXXLIQSWEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQRARDALIQLYESVGMTGGGARWQRRRHFGKKSGTARGEVGTPLDNDDSIHWACECSPDIEHVGAADANVHWRSFDSEAASEENKGKLILPKHHDKKTGCTKSVHPTRPEELPADLRTEDKWIRYFAASAALGAYKTKMSLGR
Sbjct:    1 MLAFAAARDSSSSKRHIKLSTRLQQSLIADPTTPAPRPXXXXXXXXXXXXXXXXXXXXXXXLIQSWEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQRARDALIQLYESVGMTGGGARWQRRRHFGKKSGTARGEVGTPLDNDDSIHWACECSPDIEHVGAADANVHWRSFDSEAASEENKGKLILPKHHDKKTGCTKSVHPTRPEELPADLRTEDKWIRYFAASAALGAYKTKMSLGR 242

[Close]

BLAST of jgi.p|Trimin1|349859 vs. uniprot
Match: A0A836CK79_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK79_9STRA)

HSP 1 Score: 141 bits (355), Expect = 5.500e-35
Identity = 103/106 (97.17%), Postives = 105/106 (99.06%), Query Frame = 0

Query:    1 MLAFAAARDSSSSKRHIKLSTRLQQSLIADPTTPAPRPXXXXXXXXXXXXXXXXXXXXXXXLIQSWEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQRARDAL 106
            MLAFAAARDSSSSKRH+KLSTRLQQSLIADPTTPAPRPXXXXXXXXXXXXXXXXXXXXXXXLIQ+WEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQ ARDAL
Sbjct:    1 MLAFAAARDSSSSKRHLKLSTRLQQSLIADPTTPAPRPXXXXXXXXXXXXXXXXXXXXXXXLIQNWEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQHARDAL 106

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349859 vs. uniprot

BLAST of jgi.p|Trimin1|349859 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835YTA4_9STRA	4.060e-151	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CK79_9STRA	5.500e-35	97.17	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..42

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_50	contig	Contig_50:560658..562102 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349859	mRNA_8929	Tribonema minus UTEX_B_3156	mRNA	Contig_50 560658..562420 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|349859|estExt_Genemark1.C_Ctg_500068 ID=Trimin1|349859|estExt_Genemark1.C_Ctg_500068|Name=jgi.p|Trimin1|349859|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=243bp
MLAFAAARDSSSSKRHIKLSTRLQQSLIADPTTPAPRPPRAKKARVAASS
SAAADAGELGELIQSWEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQ
RARDALIQLYESVGMTGGGARWQRRRHFGKKSGTARGEVGTPLDNDDSIH
WACECSPDIEHVGAADANVHWRSFDSEAASEENKGKLILPKHHDKKTGCT
KSVHPTRPEELPADLRTEDKWIRYFAASAALGAYKTKMSLGR*