Trimin1|349115|estExt_Genemark1.C_Ctg_360089 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349115
Unique NameTrimin1|349115|estExt_Genemark1.C_Ctg_360089
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length280
Homology
BLAST of jgi.p|Trimin1|349115 vs. uniprot
Match: A0A836CFE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFE2_9STRA)

HSP 1 Score: 463 bits (1192), Expect = 1.870e-163
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
Query:    1 MPRKLLDLNVKFPGMPRLESKYLSRVPTIFCALASTGGGKSFTTINLIRMLRAEGSINKIFLISPTADSNSIYKAILTPEDKTWDLDKNAFQHIQEVVQECEADAAKYRHDLEYQIAYKKFVGGDRISHVEENLLETGGFREIIPKRPSPALVLDDVQGSILMSQSARNPLVNLVLKEQKLIYESLGGMMSEEDFLRKLHLYTLAPHSYMFVDLWADKTKKARKKVVLVKKPKT 234
            MPRKLLDLNVKFPGMPRLESKYLSRVPTIFCALASTGGGKSFTTINLIRMLRAEGSINKIFLISPTADSNSIYKAILTPEDKTWDLDKNAFQHIQEVVQECEADAAKYRHDLEYQIAYKKFVGGDRISHVEENLLETGGFREIIPKRPSPALVLDDVQGSILMSQSARNPLVNLVLKEQKLIYESLGGMMSEEDFLRKLHLYTLAPHSYMFVDLWADKTKKARKKVVLVKKPKT
Sbjct:    1 MPRKLLDLNVKFPGMPRLESKYLSRVPTIFCALASTGGGKSFTTINLIRMLRAEGSINKIFLISPTADSNSIYKAILTPEDKTWDLDKNAFQHIQEVVQECEADAAKYRHDLEYQIAYKKFVGGDRISHVEENLLETGGFREIIPKRPSPALVLDDVQGSILMSQSARNPLVNLVLKEQKLIYESLGGMMSEEDFLRKLHLYTLAPHSYMFVDLWADKTKKARKKVVLVKKPKT 234          
BLAST of jgi.p|Trimin1|349115 vs. uniprot
Match: A0A835ZKI0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKI0_9STRA)

HSP 1 Score: 370 bits (950), Expect = 4.790e-127
Identity = 193/246 (78.46%), Postives = 200/246 (81.30%), Query Frame = 0
Query:   15 MPRLESKYLSRVPTIFCALASTGGGKSFTTINLIRMLRAEGSINKIFLISPTADSNSIYKAILTPEDKTWDLDKNAFQHIQEVVQECEADAAKYRHDLEYQIAYKKFVGGDRISHVEENLLETGGFREIIPKRPSPALVLDDVQGSILMSQSARNPLVNLVLK------------------------------------------EQKLIYESLGGMMSEEDFLRKLHLYTLAPHSYMFVDLWADK 218
            MPRLESKYLSRVPTIFCALASTGGGKSFTTINLIRM+RAEGSINK+FLISPTADSNSIYKAILTPEDKTWDLDKNAFQHIQEVVQECEADAAKYRHDLEY+IAYKKFV G+ ISHVEENLLETGGFREI PKRPSPALVLDD+QGSILMSQSARNPLVNLVLK                                          EQKLIYESLGGMMSEE+F RKLHLYTLAPHSY+FVDLWADK
Sbjct:    1 MPRLESKYLSRVPTIFCALASTGGGKSFTTINLIRMMRAEGSINKVFLISPTADSNSIYKAILTPEDKTWDLDKNAFQHIQEVVQECEADAAKYRHDLEYEIAYKKFVSGETISHVEENLLETGGFREIKPKRPSPALVLDDIQGSILMSQSARNPLVNLVLKSRHIGEGLGLSIFFMVQTLTGCPKPIRLNVTHWAIWKTHSTREQKLIYESLGGMMSEEEFQRKLHLYTLAPHSYLFVDLWADK 246          
BLAST of jgi.p|Trimin1|349115 vs. uniprot
Match: A0A835YP98_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP98_9STRA)

HSP 1 Score: 150 bits (380), Expect = 1.200e-40
Identity = 82/181 (45.30%), Postives = 116/181 (64.09%), Query Frame = 0
Query:    1 MPRKLLDLNVKFPGMPRLESKYLSRVPTIFCALASTGGGKSFTTINLIRMLRAEGSINKIFLISPTADSNSIYKAILTPE-DKTWD-LDKNAFQHIQEVVQECEADAAKYRHDLEYQIAYKKFVGGDRISHVEENLLETGGFREIIPKRPSPALVLDDVQGSILMSQSARNPLVNLVLKEQ 179
            MPRKL DL  KFP +  L S+YLSRVPTI  A+  TG GK+F  + LI+++R E SI  +F+ISPTA SN+IY+AI  PE D+ +D L    F  ++++       A  Y   L Y +A+++FV G+ +S  +E LLE GG+R+I  +RPS AL++DD Q S + S+   N   NLVL+ +
Sbjct:    1 MPRKLPDLLSKFPKIEPLTSRYLSRVPTICTAVGGTGSGKTFCLVALIKLMRREKSITHLFIISPTAHSNTIYRAIFDPETDQLFDDLGVKVFDTLRQIQDTMNGIADGYETQLRYALAFERFVRGEDVSTTDEQLLEEGGYRKIAVRRPSFALLIDDAQNSAIFSRHKNNGFPNLVLRSR 181          
BLAST of jgi.p|Trimin1|349115 vs. uniprot
Match: A0A835YYT5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYT5_9STRA)

HSP 1 Score: 144 bits (364), Expect = 3.920e-37
Identity = 75/180 (41.67%), Postives = 118/180 (65.56%), Query Frame = 0
Query:    2 PRKLLDLNVKFPGMPRLESKYLSRVPTIFCALASTGGGKSFTTINLIRMLRAEGSINKIFLISPTADSNSIYKAILTPEDKTWDLDK----NAFQHIQEVVQECEADAAKYRHDLEYQIAYKKFVGGDRISHVEENLLETGGFREIIPKRPSPALVLDDVQGSILMSQSARNPLVNLVLK 177
            PR L D+      +P LES+YLSR+PTI   + STG GK++  ++L+++LR EG+++ ++L+SPT  SN +YK+++  E K     K      ++ ++ +  + +A A ++R ++EY IA++K   G  ++  E NLLE  GFR+I+P+RP PALV+DD QGS+L S S RN L  LVL+
Sbjct:  116 PRALPDITAGLNMLPALESRYLSRLPTICGFVGSTGSGKTYLCLSLLKLLRREGTLDTVYLVSPTGASNVLYKSVIR-EGKDHVFTKPNSPQIWKDLEWIEGDVQAQADRWRDEMEYDIAHRKHTAGQTLNPHETNLLERFGFRKIVPRRPCPALVIDDAQGSLLFSPSPRNYLSQLVLR 294          
BLAST of jgi.p|Trimin1|349115 vs. uniprot
Match: A0A835YZW4_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZW4_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.350e-36
Identity = 71/161 (44.10%), Postives = 107/161 (66.46%), Query Frame = 0
Query:   20 SKYLSRVPTIFCALASTGGGKSFTTINLIRMLRAEGSINKIFLISPTADSNSIYKAILTPEDKTW-DLDKNAFQHIQEVVQECEADAAKYRHDLEYQIAYKKFVGGDRISHVEENLLETGGFREIIPKRPSPALVLDDVQGSILMSQSARNPLVNLVLKEQ 179
            S+YLSR+P I   +  TG GKS+    LI++++ EG+I  +F+ISPTA+SN++Y+ I+  +DK + D+    F+ ++E+V  CEA A  YR DLEY IA  K+  G+ +++ +E LLE  GF  ++PKRPS  L  DD QGS + S+ +RN   NLVL+ +
Sbjct:  148 SRYLSRIPAIVTLVGHTGSGKSYLATALIQLMQREGTITHLFIISPTANSNTLYQNIVKTDDKLYSDIGPAVFKSLEEIVASCEAIADVYRKDLEYCIALAKYTSGEPVTYFDEALLEARGFMPVVPKRPSFCLFCDDCQGSAIFSRGSRNSFPNLVLRSR 308          
BLAST of jgi.p|Trimin1|349115 vs. uniprot
Match: A0A835Z5J4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5J4_9STRA)

HSP 1 Score: 138 bits (347), Expect = 4.230e-36
Identity = 67/156 (42.95%), Postives = 102/156 (65.38%), Query Frame = 0
Query:   25 RVPTIFCALASTGGGKSFTTINLIRMLRAEGSINKIFLISPTADSNSIYKAILTPEDKTW-DLDKNAFQHIQEVVQECEADAAKYRHDLEYQIAYKKFVGGDRISHVEENLLETGGFREIIPKRPSPALVLDDVQGSILMSQSARNPLVNLVLKEQ 179
            R+P I   +  TG GKS+    LI+M++ EG+I  +F+ISPTA+SN++Y  +L P+DK + D+    F+ ++E+V  CEA A  YR DLEY IA  K+  G+ +++ +E LLE  G+  ++PKRPS  L  DD QGS + S+ ++N   NLVL+ +
Sbjct:    1 RIPAIVTLVGHTGSGKSYLATALIQMMQREGTITHLFIISPTANSNTLYSNVLKPDDKVYSDIGPAVFKSLEEIVASCEAVADVYRKDLEYCIALAKYTSGEPVTYFDEALLEARGYMPVVPKRPSFCLFCDDCQGSAIFSRGSKNSFPNLVLRSR 156          
BLAST of jgi.p|Trimin1|349115 vs. uniprot
Match: A0A835YL54_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL54_9STRA)

HSP 1 Score: 135 bits (339), Expect = 1.430e-34
Identity = 83/259 (32.05%), Postives = 131/259 (50.58%), Query Frame = 0
Query:    1 MPRKLLDLNVKFPGMPRLESKYLSRVPTIFCALASTGGGKSFTTINLIRMLRAEGSINKIFLISPTADSNSIYKAILTPEDKTWD-LDKNAFQHIQEVVQECEADAAKYRHDLEYQIAYKKFVGGDRISHVEENLLETGGFREIIPKRPSPALVLDDVQGSILMSQSARNPLVNLVL--------------------------------------------KEQKLIYESLGGMMSEEDFLRKLHLYTLAPHSYMFVDL 214
            M RK +DL      +  L S+ +SRVP +  A+  TG GKS+  + LI+ ++ E +I ++F+ISPTA SN+IYK I+   D+ +D L    +  ++E+   C+++A  Y H+L+   AY ++  G  + + +  LLE  G+R++IPKRP+ A+  DD   S L S S +NP  N  L                                            KE + ++E++   +S +DF RKL L+TL  H Y+F DL
Sbjct:    1 MKRKDIDLLKDIAKVEPLTSRVVSRVPCLCIAVGHTGAGKSWKIVELIKRMQMERTITRLFIISPTAASNTIYKNIVREGDRVYDDLSPKIYASLEEIESVCKSEAYVYAHELKCAAAYLRYANGLPLDYPDTQLLEQIGWRQMIPKRPAFAVFADDCSHSALFSTSRKNPWSNFCLRCRHAGNGLGDSVFMVSQTMRSGVPKALRENATHFFYVGGSMNRKEVESMWETVSSFVSFDDFERKLRLFTLENHGYLFCDL 259          
BLAST of jgi.p|Trimin1|349115 vs. uniprot
Match: A0A835Z465_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z465_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.320e-29
Identity = 77/214 (35.98%), Postives = 116/214 (54.21%), Query Frame = 0
Query:   32 ALASTGGGKSFTTINLIRMLRAEGSINKIFLISPTADSNSIYKAILTPEDKTW-DLDKNAFQHIQEVVQECEADAAKYRHDLEYQIAYKKFVGGDRISHVEENLLETGGFREIIPKRPSPALVLDDVQGSILMSQSARNPLVNLVLKEQKLIY-ESLGGMMSEEDF---------LRKLHLYTLAPHSYMFVDLWADKTKKARKKVVLVKKPKT 234
            A      GKS+    LI M++ EG+I  +F+ISPTA+SN++Y  IL P+DK + D+  N F+ + E+V  CEA    YR DLEY IA+ K+  G+ +++ +E LLE  GF  ++PKRPS  L  D  QGS + S+  RN   N VL+ + +   + L  +++ +           L   H      HS + +D   ++    RKK   VK+ KT
Sbjct:  104 AALRASSGKSYLATALIAMMQREGTITHLFIISPTANSNTLYSNILKPDDKVYSDIGPNVFKSLDEIVAACEAVGDAYRKDLEYAIAHAKYTNGELVTYFDEALLEQRGFMPVVPKRPSFCLFCDACQGSAIFSRGGRNTFPNCVLRSRHVAGGQGLSVILAAQTMRSGVPRALRLDSTHFILFNTHSRVELDEMYEEKVLYRKKKKAVKRKKT 317          
BLAST of jgi.p|Trimin1|349115 vs. uniprot
Match: A0A5C7LHA9_9SPIR (Uncharacterized protein n=1 Tax=Spirochaetes bacterium TaxID=2202144 RepID=A0A5C7LHA9_9SPIR)

HSP 1 Score: 67.4 bits (163), Expect = 4.520e-9
Identity = 46/154 (29.87%), Postives = 77/154 (50.00%), Query Frame = 0
Query:   28 TIFCALASTGGGKSFTTINLIRMLRAEGSINKIFLISPTADSNSIYKAILTPEDKTWDLDKNAFQH-IQEVVQECEADAAKYRHDLEYQIAYKKFVGGDRISHVEENLLETGGFREIIPK-RPSPALVLDDVQGSILMSQSARNPLVNLVLKEQ 179
            T+   + S G GK+     L +     GS  K++LISPT +SN ++K +   +      D  A Q  I +++ +   DA+ +     Y+ A+ K+     +   EE LL +  + E  P  +PSP +++DD+  S L    A NP +NLVL+ +
Sbjct:  110 TLVGFVGSCGRGKTNAVYLLAKRYLDYGSFTKVYLISPTYESNMLWKQLPKLDKSDVYQDVAAAQAAIADILAKIAQDASVFEFHQLYKTAWDKWKANKELKPEEETLLNSMEYVEPQPVIQPSPLIIIDDMSNSPLFRTGASNPFINLVLRHR 263          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349115 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A836CFE2_9STRA1.870e-163100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZKI0_9STRA4.790e-12778.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YP98_9STRA1.200e-4045.30Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YYT5_9STRA3.920e-3741.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZW4_9STRA1.350e-3644.10AAA domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A835Z5J4_9STRA4.230e-3642.95Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YL54_9STRA1.430e-3432.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z465_9STRA1.320e-2935.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A5C7LHA9_9SPIR4.520e-929.87Uncharacterized protein n=1 Tax=Spirochaetes bacte... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..279

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_36contigContig_36:845056..846842 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349115mRNA_8415Tribonema minus UTEX_B_3156 mRNAContig_36 845056..846842 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349115|estExt_Genemark1.C_Ctg_360089 ID=Trimin1|349115|estExt_Genemark1.C_Ctg_360089|Name=jgi.p|Trimin1|349115|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=280bp
MPRKLLDLNVKFPGMPRLESKYLSRVPTIFCALASTGGGKSFTTINLIRM
LRAEGSINKIFLISPTADSNSIYKAILTPEDKTWDLDKNAFQHIQEVVQE
CEADAAKYRHDLEYQIAYKKFVGGDRISHVEENLLETGGFREIIPKRPSP
ALVLDDVQGSILMSQSARNPLVNLVLKEQKLIYESLGGMMSEEDFLRKLH
LYTLAPHSYMFVDLWADKTKKARKKVVLVKKPKTKSKAKSTVKTKVVQKV
KIIDGTGSGSGGGGAGGGGGSGGGGPNEV*
back to top