mRNA_6717 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|348517
Unique NamemRNA_6717
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: A0A835YZX8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZX8_9STRA)

HSP 1 Score: 431 bits (1107), Expect = 5.660e-147
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 3
Query:  141 MMCRFPALLVVLAAMSWCGVVAFVPAASLGHRQQRTSAVAARVAPPSNTWSESLEAVAARLDDFIWGRHWSDNAAATADDGTAQALDEELLRRRSIRGAVVETRRRCLALEAELTSLLRIAGARPSRTELGAIHRAAAELEAVAAAEXXXXXXXXXXXXXXSPRAGPTTGGGGGAWAALYAEDGVGGARGGRLLLRALGGGGGLAGDVAAAERGAADRVTYVSQNLRIARGPCGELSVYRRSAXXXXXXXXXXXXXXXXXXXXXEAEQWFWPL 959
            MMCRFPALLVVLAAMSWCGVVAFVPAASLGHRQQRTSAVAARVAPPSNTWSESLEAVAARLDDFIWGRHWSDNAAATADDGTAQALDEELLRRRSIRGAVVETRRRCLALEAELTSLLRIAGARPSRTELGAIHRAAAELEAVAAAEXXXXXXXXXXXXXXSPRAGPTTGGGGGAWAALYAEDGVGGARGGRLLLRALGGGGGLAGDVAAAERGAADRVTYVSQNLRIARGPCGELSVYRRSAXXXXXXXXXXXXXXXXXXXXXEAEQWFWPL
Sbjct:    1 MMCRFPALLVVLAAMSWCGVVAFVPAASLGHRQQRTSAVAARVAPPSNTWSESLEAVAARLDDFIWGRHWSDNAAATADDGTAQALDEELLRRRSIRGAVVETRRRCLALEAELTSLLRIAGARPSRTELGAIHRAAAELEAVAAAEXXXXXXXXXXXXXXSPRAGPTTGGGGGAWAALYAEDGVGGARGGRLLLRALGGGGGLAGDVAAAERGAADRVTYVSQNLRIARGPCGELSVYRRSAXXXXXXXXXXXXXXXXXXXXXEAEQWFWPL 273          
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: A0A835Z5I7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5I7_9STRA)

HSP 1 Score: 119 bits (298), Expect = 7.540e-27
Identity = 109/259 (42.08%), Postives = 131/259 (50.58%), Query Frame = 3
Query:  204 AFVPAASLGHRQQRTSAVAARVAPPSNT-----WSESLEAVAARLDDFIWGRHW--SDNAAATADDGTAQALDEELLRRRSIRGAVVETRRRCLALEAELTSLLRIAGARPSRTELGAIHRAAAELEAVAAAEXXXXXXXXXXXXXXSPRAGPTTGGGGGAWAALYAEDGVGGARGGRLLLRALGGGGGLAGDVAAAERGAADRVTYVSQNLRIARGPCGELSVYRRSAXXXXXXXXXXXXXXXXXXXXXEAEQWFWPL 959
            AF PAA  G         A+  A  + T     W+ S+E +A+RLD  IWG     + +AAA A   T  A+DEE+LRRR IR ++VE RRR L LEAEL SLLRIAG +PS+ EL  +HR + ELEA+ AA XXXXXXXX          G     GGGAW  L+AE    G+    +L                A  G+   VTY SQNLRI RG  GEL V+RR                         EQWFWPL
Sbjct:   20 AFTPAAPNGPAGNNRHIAASSTAQATPTHQLSSWASSIENIASRLDAIIWGGRTGTTSDAAAIAATATPHAVDEEVLRRRGIRHSIVEKRRRSLELEAELQSLLRIAGGKPSKMELNEVHRLSGELEALQAAXXXXXXXXXEAGV----HIGNAARAGGGAWRLLFAETARSGSSASGVLXXXXXXXXXXXXXXXXAI-GSCAVVTYASQNLRIERGTNGELRVFRR-----LLAAPECACADGAEQCCSSGEQWFWPL 268          
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: A0A835Z4W4_9STRA (RNB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W4_9STRA)

HSP 1 Score: 2785 bits (7220), Expect = 0.000e+0
Identity = 1727/1727 (100.00%), Postives = 1727/1727 (100.00%), Query Frame = 1
Query:    1 MRGDMPGGPEAWPLLQQEARRLLSRMPPRSLDLHDLWKLARGKGKGVVLSTCDVARWLFGGGARRGGKQHAQSFQLTSQQGHASSDFELQQQQQQPVWAPSAAERVAAGLVLAADLQRFKRVPCVLRHSDPVVSVCEGGFKPVDQSVVATNQAMSFATMVKDQFSTAQPPAPASDATSDAAAAXXPAPKVPAPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLSDASRRQIVHSLEMLALGGSADGLLPQAKAALRQMGHEPTAAAAHAVLVQMGAWTERARKPSAGTAXXXXXXXXXXXXXXXXXXXXXXXXXXVPWSAEALRAAADVAALRRRREAQYARGPLAAPRTPLGAPLPNGRRDYRGAAFSVYCVDAPSANFYDDAVSWDPDARELLIHVVDAQLLVEDGGALDAVAQARVCTQYLPRGPLFMMPPAALQAIAFSADAPNEAITVALTIDPDTGAVTGSRLMLTVLPPVVALTHRDANAMLEGGHDQLTAIFAAAXXXXXXXXXXXXXTAVAATPGTLKAGAPLMQRDRAGAVRAVTYEDTAAHAMVDAALALFTEAAARVCADAGAAMPVLVGLEGRVRSGRARFGTAPLRRYVDLLAQRQLCAVLGRRALLGKRRVADAVAALTQVSNARLAARAAEDAKLKWEALEEHCARSRQATGLPYAAVPARGTGRGNEVVVDGLGVSILAGGRGGRREWRAGQPLTVKRCGDFCHSKRIKCKSVGGSKCQQCTQRLIECKFSVKEKTGPKPKGGQVKGEDGAVSTPPGSSGRSSAPLPPSAHMQYTGSPATTGAPAQRKGHVRHSSSDAAFAPARIAVVPYTSPRAKAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRRTESSGASLSPPFGAQPPPNVKLLPQLGAMGLPRVHHXXXXXXXXXXXARDTSVVPVSAAGISHEWGFLKAYLGTVARLLPLCDPKELQARMAARKALFLEFSSTTGPGPVPGIAXXXXXXXSGGVQEAELMAALAVGALICNQAESAKAYQAAAQAQLSEVMAAXXXXXXXXXXXXXXXXXVALPRPALAPVLCMLAFYWQYQGNSAMKDVCLVQALQTAYGPGAAAPPSLHVQLCMEHLDYARAAEPWIQSAHAAARDLPARLWALGIVSALLRDMPTLMNSARGGLVAQMYARQLGECAVAVEHEEGNELPALVCWALQALLLALLGRHADAVAAIAHVPPALDANPLIIRSMPLAWDMAILAATLAFVLGSAADYAALLRAVEWGLGVTAATQWGCRLPSMDCPLGLWVSHTCASARQSCMNVCDTVSEVAVRTKCARVRYYTSESAVAAAVGPAAPPPPAVLERGDAHSRMAPLQPPAVSAAGLALKEASPRKESSGEDSEDGLGKLDKLASVASTYLRSSKRARTAQAPXXXXXXXXXXXXXXXXXXXXXGGEDAQQAAWPLPPQHAQKQGRSLSPSHCGAPLGQHARAMAPAAYHRRAPTAGGSSSDGSXXXXXSGALRGAPAEPKLTMDVTPASVHGSAMQGSSGRVFGTRTQLTPADVHGKQGPPSPLAPLRPLLEATAAISRGSGSSGAYADVPAPEVASRGXXXXXXXXXXXXXXXXXXXXXXXXEFDGVXXXXXXXXXXXXRSXXXXXXXXXXXXXRSXXXASRSGDADCDNAAEEGSVHSRSPAAAAVYPRQQRSPALSDRSAGTGTGRRMESLSPERGPLAVPDERSGSGGGRGGVVMCR 5181
            MRGDMPGGPEAWPLLQQEARRLLSRMPPRSLDLHDLWKLARGKGKGVVLSTCDVARWLFGGGARRGGKQHAQSFQLTSQQGHASSDFELQQQQQQPVWAPSAAERVAAGLVLAADLQRFKRVPCVLRHSDPVVSVCEGGFKPVDQSVVATNQAMSFATMVKDQFSTAQPPAPASDATSDAAAAXXPAPKVPAPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLSDASRRQIVHSLEMLALGGSADGLLPQAKAALRQMGHEPTAAAAHAVLVQMGAWTERARKPSAGTAXXXXXXXXXXXXXXXXXXXXXXXXXXVPWSAEALRAAADVAALRRRREAQYARGPLAAPRTPLGAPLPNGRRDYRGAAFSVYCVDAPSANFYDDAVSWDPDARELLIHVVDAQLLVEDGGALDAVAQARVCTQYLPRGPLFMMPPAALQAIAFSADAPNEAITVALTIDPDTGAVTGSRLMLTVLPPVVALTHRDANAMLEGGHDQLTAIFAAAXXXXXXXXXXXXXTAVAATPGTLKAGAPLMQRDRAGAVRAVTYEDTAAHAMVDAALALFTEAAARVCADAGAAMPVLVGLEGRVRSGRARFGTAPLRRYVDLLAQRQLCAVLGRRALLGKRRVADAVAALTQVSNARLAARAAEDAKLKWEALEEHCARSRQATGLPYAAVPARGTGRGNEVVVDGLGVSILAGGRGGRREWRAGQPLTVKRCGDFCHSKRIKCKSVGGSKCQQCTQRLIECKFSVKEKTGPKPKGGQVKGEDGAVSTPPGSSGRSSAPLPPSAHMQYTGSPATTGAPAQRKGHVRHSSSDAAFAPARIAVVPYTSPRAKAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRRTESSGASLSPPFGAQPPPNVKLLPQLGAMGLPRVHHXXXXXXXXXXXARDTSVVPVSAAGISHEWGFLKAYLGTVARLLPLCDPKELQARMAARKALFLEFSSTTGPGPVPGIAXXXXXXXSGGVQEAELMAALAVGALICNQAESAKAYQAAAQAQLSEVMAAXXXXXXXXXXXXXXXXXVALPRPALAPVLCMLAFYWQYQGNSAMKDVCLVQALQTAYGPGAAAPPSLHVQLCMEHLDYARAAEPWIQSAHAAARDLPARLWALGIVSALLRDMPTLMNSARGGLVAQMYARQLGECAVAVEHEEGNELPALVCWALQALLLALLGRHADAVAAIAHVPPALDANPLIIRSMPLAWDMAILAATLAFVLGSAADYAALLRAVEWGLGVTAATQWGCRLPSMDCPLGLWVSHTCASARQSCMNVCDTVSEVAVRTKCARVRYYTSESAVAAAVGPAAPPPPAVLERGDAHSRMAPLQPPAVSAAGLALKEASPRKESSGEDSEDGLGKLDKLASVASTYLRSSKRARTAQAPXXXXXXXXXXXXXXXXXXXXXGGEDAQQAAWPLPPQHAQKQGRSLSPSHCGAPLGQHARAMAPAAYHRRAPTAGGSSSDGSXXXXXSGALRGAPAEPKLTMDVTPASVHGSAMQGSSGRVFGTRTQLTPADVHGKQGPPSPLAPLRPLLEATAAISRGSGSSGAYADVPAPEVASRGXXXXXXXXXXXXXXXXXXXXXXXXEFDGVXXXXXXXXXXXXRSXXXXXXXXXXXXXRSXXXASRSGDADCDNAAEEGSVHSRSPAAAAVYPRQQRSPALSDRSAGTGTGRRMESLSPERGPLAVPDERSGSGGGRGGVVMCR
Sbjct:    1 MRGDMPGGPEAWPLLQQEARRLLSRMPPRSLDLHDLWKLARGKGKGVVLSTCDVARWLFGGGARRGGKQHAQSFQLTSQQGHASSDFELQQQQQQPVWAPSAAERVAAGLVLAADLQRFKRVPCVLRHSDPVVSVCEGGFKPVDQSVVATNQAMSFATMVKDQFSTAQPPAPASDATSDAAAAXXPAPKVPAPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLSDASRRQIVHSLEMLALGGSADGLLPQAKAALRQMGHEPTAAAAHAVLVQMGAWTERARKPSAGTAXXXXXXXXXXXXXXXXXXXXXXXXXXVPWSAEALRAAADVAALRRRREAQYARGPLAAPRTPLGAPLPNGRRDYRGAAFSVYCVDAPSANFYDDAVSWDPDARELLIHVVDAQLLVEDGGALDAVAQARVCTQYLPRGPLFMMPPAALQAIAFSADAPNEAITVALTIDPDTGAVTGSRLMLTVLPPVVALTHRDANAMLEGGHDQLTAIFAAAXXXXXXXXXXXXXTAVAATPGTLKAGAPLMQRDRAGAVRAVTYEDTAAHAMVDAALALFTEAAARVCADAGAAMPVLVGLEGRVRSGRARFGTAPLRRYVDLLAQRQLCAVLGRRALLGKRRVADAVAALTQVSNARLAARAAEDAKLKWEALEEHCARSRQATGLPYAAVPARGTGRGNEVVVDGLGVSILAGGRGGRREWRAGQPLTVKRCGDFCHSKRIKCKSVGGSKCQQCTQRLIECKFSVKEKTGPKPKGGQVKGEDGAVSTPPGSSGRSSAPLPPSAHMQYTGSPATTGAPAQRKGHVRHSSSDAAFAPARIAVVPYTSPRAKAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRRTESSGASLSPPFGAQPPPNVKLLPQLGAMGLPRVHHXXXXXXXXXXXARDTSVVPVSAAGISHEWGFLKAYLGTVARLLPLCDPKELQARMAARKALFLEFSSTTGPGPVPGIAXXXXXXXSGGVQEAELMAALAVGALICNQAESAKAYQAAAQAQLSEVMAAXXXXXXXXXXXXXXXXXVALPRPALAPVLCMLAFYWQYQGNSAMKDVCLVQALQTAYGPGAAAPPSLHVQLCMEHLDYARAAEPWIQSAHAAARDLPARLWALGIVSALLRDMPTLMNSARGGLVAQMYARQLGECAVAVEHEEGNELPALVCWALQALLLALLGRHADAVAAIAHVPPALDANPLIIRSMPLAWDMAILAATLAFVLGSAADYAALLRAVEWGLGVTAATQWGCRLPSMDCPLGLWVSHTCASARQSCMNVCDTVSEVAVRTKCARVRYYTSESAVAAAVGPAAPPPPAVLERGDAHSRMAPLQPPAVSAAGLALKEASPRKESSGEDSEDGLGKLDKLASVASTYLRSSKRARTAQAPXXXXXXXXXXXXXXXXXXXXXGGEDAQQAAWPLPPQHAQKQGRSLSPSHCGAPLGQHARAMAPAAYHRRAPTAGGSSSDGSXXXXXSGALRGAPAEPKLTMDVTPASVHGSAMQGSSGRVFGTRTQLTPADVHGKQGPPSPLAPLRPLLEATAAISRGSGSSGAYADVPAPEVASRGXXXXXXXXXXXXXXXXXXXXXXXXEFDGVXXXXXXXXXXXXRSXXXXXXXXXXXXXRSXXXASRSGDADCDNAAEEGSVHSRSPAAAAVYPRQQRSPALSDRSAGTGTGRRMESLSPERGPLAVPDERSGSGGGRGGVVMCR 1727          
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: A0A835YH07_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH07_9STRA)

HSP 1 Score: 323 bits (827), Expect = 6.180e-90
Identity = 262/613 (42.74%), Postives = 313/613 (51.06%), Query Frame = 1
Query: 2158 DFCHSKRIKCKSVGGSKCQQCTQRLIECKFSVKEKTGPKPKGGQVKGEDGAVSTPPGSSGRSSAPLPPSAHMQYTGSPATTGAPAQRKGHVRHSSSDAAFAPARIAVVPYTSPRAKAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRRTESSGASLSPPFGAQPPPNVKLLPQLGAMGLPRVHHXXXXXXXXXXXARDTSVVPVSAAGISHEWGFLKAYLGTVARLLPLCDPKELQARMAARKALFLEFSSTTGPGPVPGIAXXXXXXXSGGVQEAELMAALAVGALICNQAESAKAYQAAAQAQLSEVMAAXXXXXXXXXXXXXXXXXVALPRPALAPVLCMLAFYWQYQGNSAMKDVCLVQALQTAYGPGAAAPPSLHVQLCMEHLDYARAAEPWIQSAHAAARDLPAR--LWALGIVSALLRDMPTLMNSARGGLVAQMYARQLGECAVAVEHEEGNELPALVCWALQALLLALLGRHADAVAAIAHVPPALDANPLIIRSMPLAWDMAILAATLAFVLGSAADYAALLRAVEWGLGVTAATQWGCRLPSMDCPLGLWVSHTCASARQSCMNVCDTVSEVAVRTKCARVRYYTSESAVAAAVG 3990
            D+CHSKRIKC+   G KCQQC QR +ECKFSVKEKTGPKPK   +    G   TPP                                                                                         XXXXXXX     ++ AS S    AQPP    ++  LGA  +P                        SA   + EWGFL+AY  TV RLLPL DP+ L A M  R  L         P P               V + +LMAALAVGAL+CNQ  +A+AY A A++  +E    XXXXXXXXXXXXXXXXX        A + CMLA YW   G++  +D  L ++     G  A    ++ +++C+EHLD  RAAE        A R  P    L  LG+V+ +LRD+P LM S  GG +A +YARQL   A+ VE EEG+ LPAL C ALQALLL LLGR ADA AA+A VPP LDANPL+ R +PLAWDMA+LAA  AFVLG  ADY AL RAVEW  G TAATQW CRLPS +CPL LW+SHTCA A QSC+NVCD VS+ A+ T+C     Y S +A  A  G
Sbjct:   66 DWCHSKRIKCRHTDGPKCQQCLQRGLECKFSVKEKTGPKPK--VITHNKGQQQTPP-----------------------------------------------------------------------------------------XXXXXXXXXXXXNAAASAS---RAQPP----VVTVLGAPPVP------------------------SATQQALEWGFLRAYATTVTRLLPLGDPEALHASMLMRAELHATLQLLHAPPP-----------PRAPVPDGQLMAALAVGALVCNQPLAAEAYAATARSCAAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXAAELRCMLALYWHCVGDADARDAQLRESALLLQG-SAWTEGNVALRMCIEHLDANRAAEAHAPPPSTALRFPPCAPALSVLGLVTCVLRDIPELMAST-GGELAAVYARQLAGRALVVEAEEGHALPALACRALQALLLMLLGRLADATAAVAAVPPLLDANPLVARCLPLAWDMAVLAAATAFVLGCNADYVALHRAVEWAQGATAATQWACRLPSPECPLRLWISHTCARAPQSCLNVCDVVSQAAIVTQCGAQCMYASAAAACAPPG 543          
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: A0A6H5JKX1_9PHAE (RNB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKX1_9PHAE)

HSP 1 Score: 307 bits (786), Expect = 5.520e-84
Identity = 253/757 (33.42%), Postives = 337/757 (44.52%), Query Frame = 1
Query:   34 WPLLQQEARRLLSRMPPRSLDLHDLWKLARGKGKGVVLSTCDVARWLFGGGA-RRGGKQHAQSFQLTSQQGHASSDFELQQQQQQPVWAPSAAERVAAGLVLAADLQRFKRVPCVLRHSDPV---------------------------------------------------------------------VSVCEGGFKPVDQSVVATNQAMSFATMVKDQFSTAQPPAPASDATSDAAAAXXPAPKVPAPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLSDASRRQIVHSLEMLALGGSADGLLPQAKAALRQMGHEPTAAAAHAVLVQMGAWTERARKPSAGTAXXXXXXXXXXXXXXXXXXXXXXXXXXVPWSAEALRAAADVAALRRRREAQYA-RGPLAAPRTPLGAPLPNGRR---DYRGAAFSVYCVDAPSANFYDDAVSWDPDARELLIHVVDAQLLVEDGGALDAVAQARVCTQYLPRGPLFMMPPAALQAIAFSADAPNEAITVALTIDPDTGAVTGSRLMLTVLPPVVALTHRDANAMLEGGHDQLTAIFAAAXXXXXXXXXXXXXTAVAATPGTLKAGAPLMQ-RDRAGAVRAVTYEDTAAHAMVDAALALFTEAAARVCADAGAAMPVLVGLEGRVRSGRARFGTAPLRRYVDLLAQRQLCAVLGRRALLGKRRVADAVAALTQVSNARLAARAAEDAKLKWEALEEHCARSRQATGLPYAAVPARGTGRGNEVVVDGLG 2079
            W  ++++ R LL  MP R LD+   W+ A  +GKG V++    A +LFG  +  + G +    FQ  S  G A              + PSA ER AA  VLA +  RFKRV  V +   P                                                                      V +  GGFK VDQSV  T +   F  +V +    A   A  +    DAAAA                                       A L + +   I+HSLE  A+GG    L+P+AK  +  +  +  + AA  +LV +G WT R R+P  G                            +PWSAEAL AA  +   R RR   Y  R PL      +GAP P GR    D+RGA+F VYC+D     F DDA S DP+ RE+ IH+ D Q LV  G  LD VA+ R  ++YLP+GPLFMMPP AL+A++FS    NEA+TV + +DP TG V  SR+MLT LPP V LT    + +LE      T     A                A   G  + G   ++ R  AG          +  ++VD  L ++T+   R+C  AG AMP LVG + RV +GR+R+GT PLRRY+D+LAQRQ+ A+L     L K+ + +    LT   N   A+R  E ++L  EAL  HC    +ATGL +A VPARGTGRG EV ++GLG
Sbjct:  118 WAEVREKIRALLQGMPARGLDVGAFWRAASSRGKGFVVTPAHAAEFLFGAESPAKLGLRKRPPFQFRSP-GEA--------------FRPSAVERAAAAQVLAGERSRFKRV--VSKRLGPAGVSPDGRGGRRKQRARGAGKGGGAEGEVLVADVGDGAVGVRGGGGRGGTVNAQCRDERKQEEEEDLSQPVLISVGGFKAVDQSVAVTREVADFCRVVGEVKRAAA--AGVAAGYGDAAAAEE----------------------------GGAGSALARARLFEPAFLLILHSLEAFAIGGDEQSLIPEAKRVMVDITGKANSTAAKCILVDVGLWTSR-RQPEEGGGKPGEEVGEVGRDEAGEEGGV------IPWSAEALEAATALGGERARRRVNYGKRRPL----EEVGAPAPFGRHVLHDFRGASFGVYCIDGAGTRFLDDAFSVDPETREVFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPPMALKAMSFSDKGVNEAVTVGIRLDPKTGGVASSRVMLTTLPPAVPLTFDQTDRLLEATEKGETGDGRLARVAKEIQALEYVGRRSAEASGRRERGREGVKFRKGAGGETQALEVAASRQSLVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGRSRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETANYLTWRQNKTRASRDEEASRLSLEALAAHCLAQTRATGLEHAVVPARGTGRGREVRLEGLG 816          
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: A0A835ZC43_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC43_9STRA)

HSP 1 Score: 218 bits (554), Expect = 4.910e-54
Identity = 239/634 (37.70%), Postives = 292/634 (46.06%), Query Frame = 1
Query: 2134 PLTVKRCGDFCHSKRIKCKSVG----GSKCQQCTQRLIECKFSVKEKTGPKPK----GGQVKGEDGAVSTPPGSSGRSSAPLPPSAHMQYTGSPATTGAPAQRKGHVRHSSSDAAFAPARIAVVPYTSPRAKAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRRTESSGASLSPPFGAQPPPNVKLLPQLGAMGLPRVHHXXXXXXXXXXXARDTSVVPVSAAGISHEWGFLKAYLGTVARLLPLCDPKELQARMAARKALFLEFSSTTGPGPVPGIAXXXXXXXSGGVQEAELMAALAVGALICNQAESAKAYQAAAQAQLSEVMAAXXXXXXXXXXXXXXXXXVALPRPALAPVLCMLAFYWQYQGNSAMKDVCLVQALQTAYGPGAAAPPSLHVQLCMEHLDYARAAEPWIQSAHAAARDLPARLWALGIVSALLRDMPTLMNSARGGLVAQMYARQLGECAVAVEHEEGNELPALVCWALQALLLALLGRHADAVAAIAHVPPALDANPLIIRSMPLAWDMAILAATLAFVLGSAADYAALLRAVEWGLGVTAATQWGCRLPSMDCPLGLWVSHTCASARQSCMNVCDTVSEVAVRTKCARVRYYTSESAVAAAVGPAAPPPP 4011
            P  ++   D+CH+KRIKCK       G +CQQC +R IECKFS KEKTGPKPK    G +  G    V     S G  SA L P                                 PA               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                            +GA+ +                          +  ++ E  FL+ YL TV+ LLP C    L   +AAR            PG    +A          V +A+L  ALAVGALI      A+AY AAA+A L  + +A                    P P  A VLCMLAFYWQY+G+   K V L  A       GA   P L +QLCMEHLDY  A  P        AR LP RL AL  VS +L D+  LM  + G   A  Y  QL +C+ A+    G  LPAL+C AL + LL +LGR ADA AA++ VP  LDA P   R++PL+WD A++AATL+F+L   A YA L  AVE     TAATQW CRLP+   P   ++ H C S      N+C  + +V   T+C    +Y        A+ P  P PP
Sbjct:   29 PRLLRSACDWCHTKRIKCKRDDSEPLGGRCQQCVRRNIECKFSYKEKTGPKPKIARSGKEPGGXXXXVRQSSASPGARSAQLRP---------------------------------PAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGALPM------------------------APSEQVALERVFLRTYLSTVSTLLPFCVELPLADALAAR---------ARAPGGPASVASS--------VAQAQLAGALAVGALIRGD-RVAEAYHAAARAHLKALFSA--------------------PSPEAASVLCMLAFYWQYRGDDDKKGVYLRHARLGLDRAGAV--PPLELQLCMEHLDYETAGRPVRD-----ARALPPRLRALHTVSCVLADIQDLMEPSAGPAPALAYCAQLADCSAALG--TGAGLPALLCAALHSFLLVMLGRRADAAAALSRVPDVLDACPDAPRALPLSWDAALIAATLSFLLRLEATYARLHAAVERAQNATAATQWTCRLPAPGAPPAQYLGHACRSTS----NICSVICKVGHHTQCGMHSFYQG------AIPPLGPSPP 548          
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: A0A4D9CV05_9STRA (RNB domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CV05_9STRA)

HSP 1 Score: 197 bits (501), Expect = 5.230e-48
Identity = 153/467 (32.76%), Postives = 227/467 (48.61%), Query Frame = 1
Query:  694 QIVHSLEMLALGGSADGLLPQAKAALRQMGHEPTAAAAHAVLVQMGAWTERARKPSAGTAXXXXXXXXXXXXXXXXXXXXXXXXXXVPWSAEALRAAADVAALRRRREAQYARGPLAAPRTPLGAPLPNGRRDYRGAAFSVYCVDAPSANFYDDAVSWDPDARELLIHVVDAQLLVEDGGALDAVAQARVCTQYLPRGPLFMMPPAALQAIAFSADAPNEAITVALTIDPDTGAVTGSRLMLTVLPPVVALTHRDANAMLEGGHDQLTAIFAAAXXXXXXXXXXXXXTAVAATPGTLKAGAPL--MQRDRAGAVRAVTYEDTAAHAMVDAALALFTEAAARVCADAGAAMPVLVGLEGRVRSG--RARFGTAPLRRYVDLLAQRQLCAVLGRRALLGKRRVADAVAALTQVSNARLAARAAEDAKLKWEALEEHCARSRQATGLPYAAVPARGTGRGNEVVVDGLGV 2082
            +++H LE+ +LG   +GL   ++  L+ +G   T   A  VL++ G WTER     AG                             PW  + L  A +  A   RR A  A+  +  P  P G   P+GR DYR +    Y +D P + F DDA+ +DP+  E+LIH+ D Q LVE    L+A+A+ R    YLP GPL ++PP ALQA + S    NE +T A+T+ PD G+V  +RL+L+++PP+  + + +AN +L     +    +                   A T  +   G  +  ++R+  G + A+ ++ T AH MVD  LAL++EA  R        +P+     G V  G   ARFGT PLRRY D+LAQ+Q+ +VL  R  L K  V   +  +   S A    R+A   K+  E+   +CA   +A G  YA V A  TG G EV++   G+
Sbjct:  331 RLLHHLEVFSLGAGVEGLSSTSQQVLKALGEPATPEGAKRVLLRAGYWTERR---GAGPGREENVAAETAAAQRMA----------APWPEDILELAKEALAKTERRRAALAK--VQRPNRP-GRRGPHGRHDYRASGLGAYALDPPGSEFADDALGFDPETGEVLIHIADVQALVEGTPELEALARQRGEAIYLPDGPLHLLPPPALQAASLSDREVNECVTAAVTLGPD-GSVLNARLLLSLVPPITRIRYDEANELLSASSLEDLPTYRRQAAQDLNVLLRASQARRALTKRSFSEGKRVSRVRRNTEGELEAIGFQRTPAHLMVDEFLALYSEAGRRFLKAHAVTLPLA---PGSVSGGLDAARFGTGPLRRYTDVLAQQQMVSVLKGRPPLSKSEVIRRMTQVNWQSKASQKLRSASRGKVLLESFATYCAAKAKAAGQAYAVVRATATGTGTEVMLPDAGL 777          
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: D8LIG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIG0_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 1.320e-29
Identity = 115/407 (28.26%), Postives = 189/407 (46.44%), Query Frame = 1
Query: 2764 ARDTSVVPVSA--AGISHEWGFLKAYLGTVARLLPLCDPKELQARMAARKALFLEFSSTTGPGPVPGIAXXXXXXXSGGVQEAELMAALAVGALICNQAESAKAYQAAAQAQLSEVMAAXXXXXXXXXXXXXXXXXVALPRPALAPVLCMLAFYWQYQGNSAMKDVCLVQALQTAYGPGAAAPPSLHVQLCMEHLDYARAAEPWIQSAHAAARDLPARLWALGIVSALLRDMPTLMNSARGGLVAQMYARQLGECAVAVEHEEGNELPALVCWALQALLLALLGRHADAVAAIAHVPPALDA----NPLIIRSMPLAWDMAILAATLAFVLGSAADYAALLRAVEWGLGVTAATQWGCRLPSMDCPLGLWVSHTCASARQSCMNVCDTVSEVAVRTKCARVRYYTSE 3966
            A  T+  PV A  A    E  +L  ++GTV +L+PL   + L   +  R+ L  + ++  G   V               ++A+++ A+++GALI    E+A AY  + +  L +V                      L    + P L ++A YWQ++G   +K   +  A +      +      ++ L +E+LDYAR A P           +P+   AL  +S LL +MP ++N A G   A     +L  C + + +E   EL  L+C +L+ALLLA+LG+   A   +  +P  +D     NP ++R++PL+WD  ++A+ L+F+LG  A Y  L  AVE    V A  +W   LP        +V H C S+     N+C+ + E+A RT      +Y+ E
Sbjct:  101 AAPTAQPPVEAGTAAAGRERLYLSVFIGTVGKLVPLVREEVLSVALRERQRLPQDMATAVGADLVA-------------CEQAQVVGAISLGALISGDQEAAHAYYLSLRYHLGDVN--------------------GLTGVGVVPSLALVALYWQHRGEDELKIEWVGHARRVLANVQSI---PANLVLSIEYLDYAREAHP-----RPGVELMPSSHRALHSISCLLANMPAIVNPAVGRAAAIGSCEELSICILGLRNETSVELTLLLCTSLRALLLAMLGQRDAATDVLDTIPSLVDVGSGGNPSVVRALPLSWDALLIASALSFLLGQGATYQRLRSAVELATDVPAEARWTFCLPEPGSDPQAYVVHECNSSS----NICNIMCEIASRTNFGAQPFYSDE 462          
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: A0A6U7IBS1_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A6U7IBS1_9EUKA)

HSP 1 Score: 108 bits (270), Expect = 5.560e-20
Identity = 115/360 (31.94%), Postives = 160/360 (44.44%), Query Frame = 1
Query: 1078 NGRRDYRGAAFSVYCVDAPSANFYDDAVSWDPDARELLIHVVDAQLLVEDGGALDAVAQARVCTQYLPRGPLFMMPPAALQAIAFSADAPNEAITVALTIDPDTGAVTGSRLMLTVLPPVVALTHRDANAMLEGG------HDQLTAIFAAAXXXXXXXXXXXXXTAVAATPGTLKA----------GAPLMQRDRAGAV----RAVTYEDTAAHAMVDAALALFTEAAARVCADAGAA----MPVLVGLEGRVRSGRARFGTAPLRRYVDLLAQRQLCAVLGRRALLGKRRVADAVAALTQVSNARLAARAAEDAKLKWEALEEHCARSRQATGLPYAAV----------PARGTGRGN 2055
            +GR D R      Y +D    +F DDAVS+D     L +H+ D   +V  G  LD VA+ R+ T Y    PL M+PP  L+    SA  PNE ++  +++D   G V  SRL+ +V+PPV  LT+ + + +L         H +L AI +                A AA  G  +            +P   R R  A     R      T AH +VD  L++F+ AA       GAA    +  L  +E R      R  TAPLRRY DL+AQRQLCAVL     +    VA A+    +   + +A +  +   L+  ALE HCAR    +G  +A +          P   T RGN
Sbjct:  434 HGRVDLRSRFPRAYAIDTDKTDFRDDAVSYDVITGTLSVHIADLTNVVPPGSLLDDVARLRLQTIYTGGMPLHMLPPPLLRYCCLSAKLPNECLSAVISLDAF-GRVRHSRLVRSVVPPVRTLTYEEVDRLLTDTSIDSEVHRELRAIASITRRRACNRHRVRQGKAGAAQTGAARGPRYATSSPATSSPASVRWRHVAADHSWRPEIVPQTEAHTVVDEVLSIFSYAAR------GAAKRHNLLRLPQMENR------RIATAPLRRYADLIAQRQLCAVLCGSPGMPASEVA-AIERWIRAKQSDMATQQPQPQMLR--ALESHCARQATVSGSDFAVLEGTVVKTGVAPEARTSRGN 777          
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: A0A2V3J848_9FLOR (DIS3-like exonuclease 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J848_9FLOR)

HSP 1 Score: 108 bits (269), Expect = 7.470e-20
Identity = 118/388 (30.41%), Postives = 175/388 (45.10%), Query Frame = 1
Query: 1087 RDYRGAAFSVYCVDAPSANFYDDAVSWDP----DARELLIHVVDAQLLVEDGGALDAVAQARVCTQYLPRGPLFMMPPAALQAIAFSADAPNEAITVALTIDPDTGAVTGSRLMLTVLPPVVALTHRDANAMLEGGHD------------QLTAIFA----AAXXXXXXXXXXXXXTAVAATPGTLKA---------GAPLMQRDRAGA------VRAVTYEDTAAHAMVDAALALFTEAAARVCADAGAAMPVLVGLEGRVRSGR-ARFGTAPLRRYVDLLAQRQLCAVLGRRALLGKRRVADAVAALTQVSNARLAARAAEDAKLK--------WEALEEHCARSRQATGLPYAAVPARG-----TGRGN---EVVVDGLGVSILA 2094
            R   GA   VYC+D  ++ F DD+ S +           +H+ D    V+ G A+DA+A+ R  + YLP  PL M+PP A+ A +FS   P EAIT+ + +D D   +   +L  +V+PPV+ + +   + +++G               QL A  A    A               +    P  L+A         G  L++R  A +       R + ++ T AHA+VD  L        +   +   A+P     EGR  S   AR GTAPLRRY DL+ QRQ+  VL R+   G+RR       + ++ N  LA R +E  K+         +E+L  HCA+   ATG  YA V  R      T   N   EV +DG G+S ++
Sbjct:  407 RSSNGAVLRVYCIDDRNSRFLDDSFSVEQLEGSKRVRFFLHITDVDEYVKSGSAIDAIARERGQSLYLPLKPLHMLPPPAMDAASFSTSLPVEAITIMIDLDLDKNELHKWQLFPSVVPPVIRINYEQFDNIIKGDAKAIGLSREELADLQLIAKMASRLPAKLDTRRLRRREHTPHSSLENPIHLEANRVEAKKVAGVRLVKRQSASSSKPAKVARVIDFQSTGAHAIVDNILTSCGALIRQFAKENRVALP-----EGRDASTYVARCGTAPLRRYGDLVVQRQIKCVLFRKQPDGRRR-------MNELRN-WLARRHSEGQKMVSQHRKSALFESLSIHCAQQCAATGNAYAMVRGRVRNTTITKSSNLRIEVALDGTGLSTVS 781          
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: A0A7S1TNE9_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TNE9_9RHOD)

HSP 1 Score: 90.5 bits (223), Expect = 1.850e-14
Identity = 84/267 (31.46%), Postives = 122/267 (45.69%), Query Frame = 1
Query: 1120 CVDAPSANFYDDAVSW------DPDARE---LLIHVVDAQLLVEDGGALDAVAQARVCTQYLPRGPLFMMPPAALQAIAFSADAPNEAITVALTIDPDTGAVTGSRLMLTVLPPVVALTHRDANAMLEG-----GHDQLTAIFAAAXXXXXXXXXXXXXTAVAATPGTLKAGAPLMQRDRAGAVRA------VT---YEDTAAHAMVDAALALFTEAAARVCADAGAAMPVLVGLEGRVRSGRARFGTAPLRRYVDLLAQRQLCAVL 1851
            CVD   ANF DDAVS       D  A     +++HV D   +V +G ALD  A+ R  + YLP GPL M+PP  ++A++FS  AP++A+++A+TI  D+G +   ++  +++PPVV  T   A   +       GH +      A                V A     +A     +RDR+  V        VT   Y  +  H  +D  L        R        +P   G E        R GTAPLR+Y+DL+ QRQ+ A+L
Sbjct:  338 CVDDVGANFRDDAVSCYELPSGDGHASRQIVVVVHVADVSAVVCEGSALDDAARNRAQSIYLPTGPLHMLPPVLMEAVSFSETAPSDAVSIAMTICTDSGELVRYKIARSLVPPVVCYTFDAAKEAISAMGSNNGHPK------AVMRHRDSRGDAALALLVEAASAMSRADGGRRKRDRSDFVSVRLKGDRVTVQQYAFSTIHEAMDEVLNSAGSCLRRYARHHKVYLPERRGSEFFAM----RCGTAPLRKYMDLVVQRQIKAIL 594          
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: K0S3P0_THAOC (RNB domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S3P0_THAOC)

HSP 1 Score: 70.5 bits (171), Expect = 2.820e-8
Identity = 91/334 (27.25%), Postives = 140/334 (41.92%), Query Frame = 1
Query:  955 PWSAEALRAAADVAALRRRREAQYARGPLAAPRTPLGAPLPNGRRDYRGAAFSVYCVDAPSANFYDDA------------VSWDPDARELLIHVVDAQ---------LLVEDGGALDAVAQARVCTQY-LPRGPLFMMPPAALQAIAFSADAP--NEAITVALTIDPDTGAVTGSRLMLTVLPPVVALTHRDANAMLEGGHDQ--LTAIFAAAXXXXXXXXXXXXXTAVAATPGTLKAGAPLMQRD-------RAGAVRAV--TYEDTAAHAMVDAALALFTEAAARVCADAGAAMPVLVGLEGRVRSGRARFGTAPLRRYVDLLAQRQLCAVL 1851
            PWSA+ L A+  +     +R         +    P   PL      +  ++    C+DA   +F DDA            VS      E+LIH+ D           L   D   L   A+ R  ++Y LP GPL ++PP AL+A++   D    N  +T+   ID   G +  + L  T++    ALT  DA ++L+   D+  + A+ + A                AA     K    L Q++       R G    V  +++ +  H +VD++L L+  A   +   A   +P      G + +   R GTAPLRRY+D +AQRQ  AVL
Sbjct:  432 PWSADTLEASRSLVKAEEKRRTLLLNTCKSIKTKPRKKPLAQLEDRFDLSSLPCVCIDAKRTSFRDDAIGIRLRSSTGRKVSKAASKWEVLIHIADVSDIYLKGEGLLPSHDIALLRHAAEQRGMSRYDLPLGPLHLLPPVALKALSLKTDEDSCNRCVTLWAYIDERDGKLLEAGLERTLIASPTALTFADATSLLDCDTDKSNVKAVLSVAHRNLSRWSRRHANLNEAAR----KREDRLSQKELISNATGRDGRDDGVGGSFQRSRGHRLVDSSLDLYAFALGTLMRRANQPIP---RAPGSMENRGGRLGTAPLRRYIDGMAQRQAIAVL 758          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YZX8_9STRA5.660e-147100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z5I7_9STRA7.540e-2742.08Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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BLAST of jgi.p|Trimin1|348517 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A835Z4W4_9STRA0.000e+0100.00RNB domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A835YH07_9STRA6.180e-9042.74Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5JKX1_9PHAE5.520e-8433.42RNB domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZC43_9STRA4.910e-5437.70Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A4D9CV05_9STRA5.230e-4832.76RNB domain-containing protein n=2 Tax=Monodopsidac... [more]
D8LIG0_ECTSI1.320e-2928.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6U7IBS1_9EUKA5.560e-2031.94Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A2V3J848_9FLOR7.470e-2030.41DIS3-like exonuclease 1 n=1 Tax=Gracilariopsis cho... [more]
A0A7S1TNE9_9RHOD1.850e-1431.46Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]
K0S3P0_THAOC2.820e-827.25RNB domain-containing protein n=1 Tax=Thalassiosir... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_25contigContig_25:1093183..1095441 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|348517|estExt_Genemark1.C_Ctg_250135
Hectar predicted targeting categorychloroplast
TranscriptId348839
TrackFilteredModels1
ProteinId348517
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348517gene_6717Tribonema minus UTEX_B_3156 geneContig_25 1093183..1095441 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348517Trimin1|348517|estExt_Genemark1.C_Ctg_250135Tribonema minus UTEX_B_3156 polypeptideContig_25 1093743..1095127 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6717_3exon_6717_3Tribonema minus UTEX_B_3156 exonContig_25 1093183..1094365 -
exon_6717_2exon_6717_2Tribonema minus UTEX_B_3156 exonContig_25 1094929..1095155 -
exon_6717_1exon_6717_1Tribonema minus UTEX_B_3156 exonContig_25 1095330..1095441 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_6717UTR3_6717Tribonema minus UTEX_B_3156 three_prime_UTRContig_25 1093183..1093742 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6717CDS_6717Tribonema minus UTEX_B_3156 CDSContig_25 1094929..1095127 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_6717UTR5_6717Tribonema minus UTEX_B_3156 five_prime_UTRContig_25 1095330..1095441 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6717 ID=mRNA_6717|Name=jgi.p|Trimin1|348517|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1522bp|location=Sequence derived from alignment at Contig_25:1093183..1095441- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CCGCAATTGCACACAAGGCGTGGACAGCAGCAGGAGCAGGCCCGGCTGCG
CAATTGCTTAGCCGGCATCCGCTGCGCCTTCTAGTCCCGCCAATCATCGT
GGCAGCCCACAGGGTCCTCTCCCTCTATCCTAGGACGTCAATGATGTGTC
GCTTTCCTGCTCTGCTGGTCGTCTTGGCGGCGATGAGCTGGTGCGGCGTG
GTGGCTTTCGTCCCCGCAGCATCTCTCGGGCACCGGCAACAACGCACCTC
GGCAGTGGCAGCACGCGTTGCCCCTCCGTCCAACACATGGTCAGAGAGCT
TAGAGGCCGTTGCCGCTAGGCTGGATGACTTCATCTGGGGCCGCCACTGG
AGCGACAACGCTGCCGCCACCGCGGACGACGGCACCGCGCAGGCGCTCGA
CGAGGAGCTGCTGCGCCGCCGCAGCATCCGCGGCGCCGTCGTCGAGACAC
GCCGCCGCTGCCTCGCGCTCGAGGCGGAGCTCACGTCGCTGCTGCGCATC
GCCGGCGCGCGCCCGTCGCGCACAGAGCTCGGCGCCATCCACCGCGCCGC
CGCAGAGCTAGAAGCCGTCGCCGCGGCGGAGGCGACGGCCGCGTCAGCGG
CTGTGGAGGCGGGCGTGCGCGCGTCGCCGCGCGCGGGCCCTACCACAGGC
GGCGGCGGCGGCGCGTGGGCGGCGCTGTACGCGGAGGACGGCGTGGGGGG
GGCGCGCGGAGGGCGGCTGCTGCTGAGGGCGCTGGGGGGCGGGGGGGGGC
TCGCGGGGGACGTCGCCGCCGCGGAGCGCGGCGCCGCGGATCGGGTGACG
TACGTGTCGCAGAACCTGCGCATCGCGCGCGGGCCGTGCGGCGAGCTGAG
CGTGTACAGGCGGAGCGCCGCCGCCGCCGCTGCTGCTGCCGCCGCTCCCG
CCGGCGCTGCGGAGGAGGGCGGGGAGCAGGAGGAGGCGGAGCAGTGGTTC
TGGCCGCTGTGAGGCGCTGCTGTTGCGCCGCTTCCGCTGCTGCCGCTGCG
CGTGGCGATGCTGGCTCAAACGCACGGCACGCCGCCAGAAGCGGTGGCGC
GGGGAGACAGGCGACGGACACGGGGAAGGGAAATAACATTGGCTGGCAAA
AGAAGCATAGTAGCGCTAGCTTCGCTGTCGCCGCCAGAACCGCGCTGATT
TTGTAACGGTTTCTTCAGTCTCTGCACGGCTCGGCGGCGGCGGCACTCAG
CGCTTTCAGGGGGAGAGCTTTGGCGTATCTGTAACCGCAGCATCACAATC
CCTTTACACAGTGGAATTTTCGCAAAGACAAGAGTGGCTGCTCCACGGTT
TGGGCAGACCCCGCCGCGGCAAAGGCTCGAGTGGCTGAGCACGAAGGGGG
GGGAGAGACCCCCCATTCTTGCCCATCTACGTATGGTGCCGCTCGTAGGT
TTGCCGCTGGCATGGGTCCTCTGCTTTTGTATGCCGGCGATTTGTGTGTG
CCTGTGTGTGCGTGTCAGTGTGCGTGGTCCGTGCGCAACTGTAATACATG
CTGCCAGAGCAGCTTTTTTTCT
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protein sequence of jgi.p|Trimin1|348517

>Trimin1|348517|estExt_Genemark1.C_Ctg_250135 ID=Trimin1|348517|estExt_Genemark1.C_Ctg_250135|Name=jgi.p|Trimin1|348517|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=274bp
MMCRFPALLVVLAAMSWCGVVAFVPAASLGHRQQRTSAVAARVAPPSNTW
SESLEAVAARLDDFIWGRHWSDNAAATADDGTAQALDEELLRRRSIRGAV
VETRRRCLALEAELTSLLRIAGARPSRTELGAIHRAAAELEAVAAAEATA
ASAAVEAGVRASPRAGPTTGGGGGAWAALYAEDGVGGARGGRLLLRALGG
GGGLAGDVAAAERGAADRVTYVSQNLRIARGPCGELSVYRRSAAAAAAAA
AAPAGAAEEGGEQEEAEQWFWPL*
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mRNA from alignment at Contig_25:1093183..1095441-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6717 ID=mRNA_6717|Name=jgi.p|Trimin1|348517|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2259bp|location=Sequence derived from alignment at Contig_25:1093183..1095441- (Tribonema minus UTEX_B_3156 )
CCGCAATTGCACACAAGGCGTGGACAGCAGCAGGAGCAGGCCCGGCTGCG CAATTGCTTAGCCGGCATCCGCTGCGCCTTCTAGTCCCGCCAATCATCGT GGCAGCCCACAGGTGAAAAAATAATCCTTCTGGGGCCATTGACAGCTGCT AGATTGATGGCCACCGCACACGATGCCGCTGGCGCTTTAGTCACTTTGAT GCGATTGTGCGTGATTATGCTTGGCGGCATCTTGCTATGCCGCAGCTCCG CTCGCCTCTAAGCTTTTGCTCTGTGTCCGTGCGCAGGGTCCTCTCCCTCT ATCCTAGGACGTCAATGATGTGTCGCTTTCCTGCTCTGCTGGTCGTCTTG GCGGCGATGAGCTGGTGCGGCGTGGTGGCTTTCGTCCCCGCAGCATCTCT CGGGCACCGGCAACAACGCACCTCGGCAGTGGCAGCACGCGTTGCCCCTC CGTCCAACACATGGTCAGAGAGCTTAGAGGCCGTTGCCGCTAGGCTGGAT GACTTCATCTGGGGTGAGCACGCACAGTGTTGCACTGCGCCTTTCAGTGT CTCATGCCCGTAGGGTTTTCATAATTAGGTAGGCAACAGTCAGACAATTT TGGTTCCCTGGGGTCTTGTCACTGTGGATGCATCTTACGACTGGCGCTTG GTTACGGGAGGGGTTTTGTGCCTCCGACTTTCGGATATTCCAACTTACCT ATATGTTTACTGGTGCCGGCAAGTTCTCTGAATGCGCTACCAGCAAAAAC AAATGGTTATTTCCGCAGCTTTGCCAGGGCATGGCAGAGACGCCAGTAAT GGCTGACCACGTCGACAACGAGGTTCTCGCCTTTGCTGCTTGCAGAACAC ATTTCAACAGTAGCACGCACCGGCTCAACGGAATACCTGGGGTAATTACA AATAGAGTCTCAAAGTGTGTTTGCTCTGAGCGCTCTGCGCCTGTGGAAAC CGTGTAATCTCTAATGCGATTGACAGGTTGTGCGTTCGCCTCATGCCGAG CCCTCTGTTGTTCCGGGAAAGCACTCGCTTACCCCATCATCCCTTCACTC ACTCCCCCCCCCCACTCCCCTCCCAGGCCGCCACTGGAGCGACAACGCTG CCGCCACCGCGGACGACGGCACCGCGCAGGCGCTCGACGAGGAGCTGCTG CGCCGCCGCAGCATCCGCGGCGCCGTCGTCGAGACACGCCGCCGCTGCCT CGCGCTCGAGGCGGAGCTCACGTCGCTGCTGCGCATCGCCGGCGCGCGCC CGTCGCGCACAGAGCTCGGCGCCATCCACCGCGCCGCCGCAGAGCTAGAA GCCGTCGCCGCGGCGGAGGCGACGGCCGCGTCAGCGGCTGTGGAGGCGGG CGTGCGCGCGTCGCCGCGCGCGGGCCCTACCACAGGCGGCGGCGGCGGCG CGTGGGCGGCGCTGTACGCGGAGGACGGCGTGGGGGGGGCGCGCGGAGGG CGGCTGCTGCTGAGGGCGCTGGGGGGCGGGGGGGGGCTCGCGGGGGACGT CGCCGCCGCGGAGCGCGGCGCCGCGGATCGGGTGACGTACGTGTCGCAGA ACCTGCGCATCGCGCGCGGGCCGTGCGGCGAGCTGAGCGTGTACAGGCGG AGCGCCGCCGCCGCCGCTGCTGCTGCCGCCGCTCCCGCCGGCGCTGCGGA GGAGGGCGGGGAGCAGGAGGAGGCGGAGCAGTGGTTCTGGCCGCTGTGAG GCGCTGCTGTTGCGCCGCTTCCGCTGCTGCCGCTGCGCGTGGCGATGCTG GCTCAAACGCACGGCACGCCGCCAGAAGCGGTGGCGCGGGGAGACAGGCG ACGGACACGGGGAAGGGAAATAACATTGGCTGGCAAAAGAAGCATAGTAG CGCTAGCTTCGCTGTCGCCGCCAGAACCGCGCTGATTTTGTAACGGTTTC TTCAGTCTCTGCACGGCTCGGCGGCGGCGGCACTCAGCGCTTTCAGGGGG AGAGCTTTGGCGTATCTGTAACCGCAGCATCACAATCCCTTTACACAGTG GAATTTTCGCAAAGACAAGAGTGGCTGCTCCACGGTTTGGGCAGACCCCG CCGCGGCAAAGGCTCGAGTGGCTGAGCACGAAGGGGGGGGAGAGACCCCC CATTCTTGCCCATCTACGTATGGTGCCGCTCGTAGGTTTGCCGCTGGCAT GGGTCCTCTGCTTTTGTATGCCGGCGATTTGTGTGTGCCTGTGTGTGCGT GTCAGTGTGCGTGGTCCGTGCGCAACTGTAATACATGCTGCCAGAGCAGC TTTTTTTCT
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Coding sequence (CDS) from alignment at Contig_25:1093183..1095441-

>mRNA_6717 ID=mRNA_6717|Name=jgi.p|Trimin1|348517|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=822bp|location=Sequence derived from alignment at Contig_25:1093183..1095441- (Tribonema minus UTEX_B_3156 )
ATGATGTGTCGCTTTCCTGCTCTGCTGGTCGTCTTGGCGGCGATGAGCTG
GTGCGGCGTGGTGGCTTTCGTCCCCGCAGCATCTCTCGGGCACCGGCAAC
AACGCACCTCGGCAGTGGCAGCACGCGTTGCCCCTCCGTCCAACACATGG
TCAGAGAGCTTAGAGGCCGTTGCCGCTAGGCTGGATGACTTCATCTGGGG
CCGCCACTGGAGCGACAACGCTGCCGCCACCGCGGACGACGGCACCGCGC
AGGCGCTCGACGAGGAGCTGCTGCGCCGCCGCAGCATCCGCGGCGCCGTC
GTCGAGACACGCCGCCGCTGCCTCGCGCTCGAGGCGGAGCTCACGTCGCT
GCTGCGCATCGCCGGCGCGCGCCCGTCGCGCACAGAGCTCGGCGCCATCC
ACCGCGCCGCCGCAGAGCTAGAAGCCGTCGCCGCGGCGGAGGCGACGGCC
GCGTCAGCGGCTGTGGAGGCGGGCGTGCGCGCGTCGCCGCGCGCGGGCCC
TACCACAGGCGGCGGCGGCGGCGCGTGGGCGGCGCTGTACGCGGAGGACG
GCGTGGGGGGGGCGCGCGGAGGGCGGCTGCTGCTGAGGGCGCTGGGGGGC
GGGGGGGGGCTCGCGGGGGACGTCGCCGCCGCGGAGCGCGGCGCCGCGGA
TCGGGTGACGTACGTGTCGCAGAACCTGCGCATCGCGCGCGGGCCGTGCG
GCGAGCTGAGCGTGTACAGGCGGAGCGCCGCCGCCGCCGCTGCTGCTGCC
GCCGCTCCCGCCGGCGCTGCGGAGGAGGGCGGGGAGCAGGAGGAGGCGGA
GCAGTGGTTCTGGCCGCTGTGA
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