Trimin1|348420|estExt_Genemark1.C_Ctg_240030 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348420
Unique NameTrimin1|348420|estExt_Genemark1.C_Ctg_240030
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length402
Homology
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BLAST of jgi.p|Trimin1|348420 vs. uniprot
Match: A0A835Z1E2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1E2_9STRA)

HSP 1 Score: 381 bits (978), Expect = 4.340e-127
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0 
Query:    1 MFTTITVAAALCLVASPLVSAGSAPIPHAQRDLAESCFIYKNAGLPPSLAQQLDLFKEPVRVFCDAALAALDAGAYQTKAVNAPDPCDECETEPVACDCKTGCTAGGCDEGFVVGKQWCLFANIETCELTQDSXXXXXXXXXXXXXXXXXXXXXXXVACGACLPGFYGAQCAPCACGKGFLCDDGVAGTGACVKITPAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAPPVAAADNGAPGIGDTASG 262
            MFTTITVAAALCLVASPLVSAGSAPIPHAQRDLAESCFIYKNAGLPPSLAQQLDLFKEPVRVFCDAALAALDAGAYQTKAVNAPDPCDECETEPVACDCKTGCTAGGCDEGFVVGKQWCLFANIETCELTQDSXXXXXXXXXXXXXXXXXXXXXXXVACGACLPGFYGAQCAPCACGKGFLCDDGVAGTGACVKITPAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAPPVAAADNGAPGIGDTASG
Sbjct:    1 MFTTITVAAALCLVASPLVSAGSAPIPHAQRDLAESCFIYKNAGLPPSLAQQLDLFKEPVRVFCDAALAALDAGAYQTKAVNAPDPCDECETEPVACDCKTGCTAGGCDEGFVVGKQWCLFANIETCELTQDSXXXXXXXXXXXXXXXXXXXXXXXVACGACLPGFYGAQCAPCACGKGFLCDDGVAGTGACVKITPAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAPPVAAADNGAPGIGDTASG 262
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348420 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z1E2_9STRA4.340e-127100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..265
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_24contigContig_24:333745..341052 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348420mRNA_7494Tribonema minus UTEX_B_3156 mRNAContig_24 333587..341052 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348420|estExt_Genemark1.C_Ctg_240030 ID=Trimin1|348420|estExt_Genemark1.C_Ctg_240030|Name=jgi.p|Trimin1|348420|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=402bp
MFTTITVAAALCLVASPLVSAGSAPIPHAQRDLAESCFIYKNAGLPPSLA
QQLDLFKEPVRVFCDAALAALDAGAYQTKAVNAPDPCDECETEPVACDCK
TGCTAGGCDEGFVVGKQWCLFANIETCELTQDSFEVGKQWCVFANIETCE
LTQDSFVACGACLPGFYGAQCAPCACGKGFLCDDGVAGTGACVKITPAPT
PAPTPAPTPAPTPAPTPAPTPAPTPAPTPAPTAAPTAAPTVAAPPVAAAD
NGAPGIGDTASGGSGGGGGGGSSAGVTAAWASVLSVAVVGAAAGGAVFTY
RRRKNMEAAAPAGSGGGGGGGAAAAAAVAAMVAMVAAPAAAAAATAMAAA
SAGAAMAAVAMIAAAAAAAAAAAMTTAAAAAAVAAAAAAAATAAAAAAAA
C*
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