mRNA_7494 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|348420
Unique Name	mRNA_7494
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

[Close]

BLAST of jgi.p|Trimin1|348420 vs. uniprot
Match: A0A835Z1E2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1E2_9STRA)

HSP 1 Score: 381 bits (978), Expect = 2.700e-126
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 1

Query:    1 MFTTITVAAALCLVASPLVSAGSAPIPHAQRDLAESCFIYKNAGLPPSLAQQLDLFKEPVRVFCDAALAALDAGAYQTKAVNAPDPCDECETEPVACDCKTGCTAGGCDEGFVVGKQWCLFANIETCELTQDSXXXXXXXXXXXXXXXXXXXXXXXVACGACLPGFYGAQCAPCACGKGFLCDDGVAGTGACVKITPAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAPPVAAADNGAPGIGDTASG 786
            MFTTITVAAALCLVASPLVSAGSAPIPHAQRDLAESCFIYKNAGLPPSLAQQLDLFKEPVRVFCDAALAALDAGAYQTKAVNAPDPCDECETEPVACDCKTGCTAGGCDEGFVVGKQWCLFANIETCELTQDSXXXXXXXXXXXXXXXXXXXXXXXVACGACLPGFYGAQCAPCACGKGFLCDDGVAGTGACVKITPAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAPPVAAADNGAPGIGDTASG
Sbjct:    1 MFTTITVAAALCLVASPLVSAGSAPIPHAQRDLAESCFIYKNAGLPPSLAQQLDLFKEPVRVFCDAALAALDAGAYQTKAVNAPDPCDECETEPVACDCKTGCTAGGCDEGFVVGKQWCLFANIETCELTQDSXXXXXXXXXXXXXXXXXXXXXXXVACGACLPGFYGAQCAPCACGKGFLCDDGVAGTGACVKITPAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAPPVAAADNGAPGIGDTASG 262

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348420 vs. uniprot

BLAST of jgi.p|Trimin1|348420 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z1E2_9STRA	2.700e-126	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_24	contig	Contig_24:333587..341052 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|348420\|estExt_Genemark1.C_Ctg_240030
Hectar predicted targeting category	signal peptide
TranscriptId	348742
Track	FilteredModels1
ProteinId	348420

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348420	gene_7494	Tribonema minus UTEX_B_3156	gene	Contig_24 333587..341052 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348420	Trimin1\|348420\|estExt_Genemark1.C_Ctg_240030	Tribonema minus UTEX_B_3156	polypeptide	Contig_24 333745..341052 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_7494_7	exon_7494_7	Tribonema minus UTEX_B_3156	exon	Contig_24 333587..334014 -
exon_7494_6	exon_7494_6	Tribonema minus UTEX_B_3156	exon	Contig_24 334042..334313 -
exon_7494_5	exon_7494_5	Tribonema minus UTEX_B_3156	exon	Contig_24 334878..334913 -
exon_7494_4	exon_7494_4	Tribonema minus UTEX_B_3156	exon	Contig_24 335703..335928 -
exon_7494_3	exon_7494_3	Tribonema minus UTEX_B_3156	exon	Contig_24 336178..336240 -
exon_7494_2	exon_7494_2	Tribonema minus UTEX_B_3156	exon	Contig_24 337803..337874 -
exon_7494_1	exon_7494_1	Tribonema minus UTEX_B_3156	exon	Contig_24 340786..341052 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_7494	UTR3_7494	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_24 333587..333744 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_7494	CDS_7494	Tribonema minus UTEX_B_3156	CDS	Contig_24 340786..341052 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_24:333587..341052-
coding sequence from alignment at Contig_24:333587..341052-

spliced messenger RNA

>mRNA_7494 ID=mRNA_7494|Name=jgi.p|Trimin1|348420|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1364bp|location=Sequence derived from alignment at Contig_24:333587..341052- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTTCACCACGATTACCGTGGCTGCGGCCCTCTGCCTCGTGGCATCGCC
GCTCGTCAGCGCGGGGTCCGCTCCCATTCCGCATGCGCAGAGGGATCTGG
CCGAATCGTGTTTCATCTACAAAAACGCGGGACTGCCCCCCAGTTTGGCC
CAGCAACTTGACCTCTTCAAGGAACCAGTCCGTGTGTTTTGCGACGCGGC
CCTCGCCGCCCTCGACGCTGGGGCGTATCAGACCAAGGCTGTCAACGCCC
CTGACCCGTGTGACGAGTGCGAGACGGAGCCGGTGGCGTGCGACTGCAAG
ACGGGGTGCACAGCGGGAGGGTGCGATGAGGGATTTGTGGTCGGAAAGCA
GTGGTGCCTCTTTGCCAACATAGAGACGTGCGAGCTGACGCAGGACTCCT
TTGAGGTTGGAAAGCAGTGGTGCGTCTTTGCCAACATCGAGACGTGCGAG
CTGACCCAGGACTCCTTTGTAGCGTGCGGCGCGTGCCTACCGGGCTTCTA
TGGTGCACAGTGCGCGCCCTGCGCCTGTGGCAAGGGCTTCCTTTGTGACG
ATGGCGTTGCCGGAACGGGCGCTTGCGTCAAGATTACGCCCGCGCCAACT
CCCGCGCCTACTCCTGCGCCGACTCCAGCGCCCACTCCTGCGCCGACTCC
CGCGCCGACACCAGCGCCGACGCCGGCCCCCACGCCGGCGCCCACCGCGG
CCCCCACCGCCGCGCCGACGGTAGCAGCGCCGCCGGTGGCAGCGGCAGAC
AACGGCGCGCCGGGCATCGGCGACACCGCCAGCGGCGGCAGCGGCGGCGG
CGGCGGCGGCGGCAGCAGCGCCGGCGTGACGGCGGCGTGGGCGTCCGTGC
TGAGCGTTGCTGTCGTGGGCGCTGCCGCCGGCGGCGCCGTGTTCACGTAC
CGGCGGCGGAAGAACATGGAGGCGGCGGCGCCGGCGGGCAGTGGCGGTGG
CGGCGGCGGCGGTGCTGCTGCTGCGGCGGCGGTGGCGGCGATGGTGGCAA
TGGTTGCTGCACCAGCGGCCGCAGCGGCGGCGACGGCAATGGCTGCTGCT
TCTGCTGGTGCTGCGATGGCGGCGGTGGCGATGATAGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCTGCGATGACAACAGCGGCGGCAGCGGCAGCGGTTG
CTGCTGCTGCTGCTGCTGCAGCAACGGCGGCGGCGGCGGCAGCAGCAGCA
TGCTGAGCAATGCTCACTGCACCATCACAGGTGCACAACGGCTGGGGTAC
CGCCAGCCACAATCGTCACCGAGCACCTATGCACGCGGCACATGAAACGC
ACGCCTCTTGAGGCGTGTGTGCCTGTGCCCCATGCGCCGACACACCTTCA
AGTCTCATACACCC

protein sequence of jgi.p|Trimin1|348420

>Trimin1|348420|estExt_Genemark1.C_Ctg_240030 ID=Trimin1|348420|estExt_Genemark1.C_Ctg_240030|Name=jgi.p|Trimin1|348420|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=402bp
MFTTITVAAALCLVASPLVSAGSAPIPHAQRDLAESCFIYKNAGLPPSLA
QQLDLFKEPVRVFCDAALAALDAGAYQTKAVNAPDPCDECETEPVACDCK
TGCTAGGCDEGFVVGKQWCLFANIETCELTQDSFEVGKQWCVFANIETCE
LTQDSFVACGACLPGFYGAQCAPCACGKGFLCDDGVAGTGACVKITPAPT
PAPTPAPTPAPTPAPTPAPTPAPTPAPTPAPTAAPTAAPTVAAPPVAAAD
NGAPGIGDTASGGSGGGGGGGSSAGVTAAWASVLSVAVVGAAAGGAVFTY
RRRKNMEAAAPAGSGGGGGGGAAAAAAVAAMVAMVAAPAAAAAATAMAAA
SAGAAMAAVAMIAAAAAAAAAAAMTTAAAAAAVAAAAAAAATAAAAAAAA
C*

mRNA from alignment at Contig_24:333587..341052-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_7494 ID=mRNA_7494|Name=jgi.p|Trimin1|348420|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7466bp|location=Sequence derived from alignment at Contig_24:333587..341052- (Tribonema minus UTEX_B_3156 )
ATGTTCACCACGATTACCGTGGCTGCGGCCCTCTGCCTCGTGGCATCGCC
GCTCGTCAGCGCGGGGTCCGCTCCCATTCCGCATGCGCAGAGGGATCTGG
CCGAATCGTGTTTCATCTACAAAAACGCGGGACTGCCCCCCAGTTTGGCC
CAGCAACTTGACCTCTTCAAGGAACCAGTCCGTGTGTTTTGCGACGCGGC
CCTCGCCGCCCTCGACGCTGGGGCGTATCAGACCAAGGCTGTCAACGCCC
CTGACCCGTGTGACGAGGTGAACAGTGCGGATTTGCTGGCAGCCTTGGAT
GGTTTCGCCAGCACCGTGATCACGCCTACGGCGATCAAGGACTGCTGCTG
CACCAAGTGATTCAGTTTGCTCTGCGGCGCTACAGAATGTTTCATCGATG
CCGCACGCAAGGTGATCTTGTGCAGTGGGGCGTGAGGCAGCAACTTGCCA
CAAATGCTTCAGAAGATAGAGCGCGGGGGCTGGCGGCGGAGCTACAAAGT
GCATATGACGTGAAGCAGTGCAAGCAATGTGTGCAGCAGATATCTATATG
GCTTCAGAGTGTAGGCTCAAAGTGATGAGCAACATACATGCCTGCAAAGA
TAATTCATGCACGTTTTTTGACATTTTTGGTCGCCTTGGTGTCCATTGCC
TGTTGACTTGTCTTGAATGTCAAGCACTTGCATGGGACATGATGAACCAC
TGGCACTGTGCCAGCTGCAAGAGCACTGCATCCAGGATCCGCTCCGCTCA
TCCGCAACCCTGAAACCCAAAAAGCAACCGAGGCCCTTGTCCAGTAGTAA
AGTCTTCAGGGCAGAACTGATATTGAAGTTTGGTTATGGCATGCTGTAGC
CCTATGTCAGGGGCATCTGCTGACTACTCACTTGTTGAAGTTGATATTGA
TCCTGATGTGATATTGAACTTCAACGGTGATATTCAAACTTCAACTTCAT
ACCAACTTCAACTGTCATGTCACTGCTCAACGTGCAATAGCACGGCTCCA
CCCATCTCAACTTCAACAACCAAGAGCTCCTCTGGTGCGTCTGAGTGAGG
CCAACAACCTACTATTATCTAACTTCAACAGTTTGAGGGCCTTGACTGAC
CTCACTATAGCATAAGTGCTCGGTTGCTTTTTGGGTTTCAGGGTCGCGGA
TGGGCGGAGCGGATCCTAGGATTCCGATTTGTCTGCAAGGCAGCATCACC
ATCAGCCATAGCACAGGCATGTCTTGCACTTGTGTGCTGTCTGTCTCGCA
TGCCCTTGCCGTGATTTGCCAGAAATTTGTGCTGGGCGATTTATGTAGTG
CCATGTTGTCCCCACATCAGTATGTGTCTTGTCATGCTTTACATCACGAA
CTCCGGTTAAGTCGGCGAGTCACATGCTGCAACCTGGTCGGGCATGCTGT
GCAAAGCGGCGAGCCTGAGGAAGTTTAATGCTGGCTTCCGTACTTTTTAT
TGATTCTCGCTCAGGGCGCGAAAAAGCCCAGATGATTGGCTTCCGTACTA
CACTTGAACAAGTGCCACTAACAATGCAGGTGAGACACCCACACACAGCA
CAGTTAAACGGACTGCGATAATAGCATGTGTTTCATCGGAGCTGTTGCGC
TTGTCTGAGCAGACAACTGACAATGAACAATCTTGTAACCGCCACAACTG
TAACAGCCTGAGTCACAGGTGACGCTCCAACATCCGGTATCACCACATTC
ACCCCTATAGCTAGACTGCAAAGGGTACTGCGAATGGGGCCAACTGCACA
TATGCAACACAACTTGCACGCCGATCTGCACAAAGCGATCAGCCCTGTGC
ACACGCAGTCAATTAACAGAGCATGTGTGGTATCCTGGCACCCGACGGTC
TTGCCCCAGAAGGGGACGGCTGTCCCACTTGGTGTGCAGAAGCTTATCAG
CTCATTGGTAAAACCAGGGTCACAACACATGCCACACAAGATGCCTCTCA
CACGCCGGGGTCTCTACCAAGCACAGAGGCTACACTGTGGCACATGCCAT
AGGATGAACCAGCTTCCAGCTGGGGTTGTGTGCCAACTATGAAGTGCAAC
CCCGCCACGCAGATGCGTGCGGGGGGCTATTTAACAGGCGGAGGTCTCAT
TCGTTGATGGAATGAACCAGACAAATCACTCCACCAACTACGAACGGCCA
TGCACCACCACCCATCGAATACAGAAGAGCTCTCAATCTGTCAATCCTCA
CTATGTTCGGACCGACCTGGTAAGTATGAATCTTGCTGAGCGCGCGTTGC
GCAATGCAGGGTCTGCTGAGCAGTGAATTGAAGTTAAGAGTTGCGAGCGC
GGCACAAAGGCGGGCAGGGAGGGGGTGCCGGGCAGGAGCTGTGGACGCAT
GAATGCGCGGCGACAGTGACACTTGCTGCACATGTGAGGATGCCGCGATG
GATGGGGGCCATGTCATTGAGCAAGTTCTGAACATACTAGGTTTAGGGCA
TATTCTGACATCAGACACAGACACGCGACCACTCGCAGCATCGCCACACA
AGTCCATCACATTTATTGATAAAACAAGCAGTGATCCCTCTATGATTCAT
GTTCACCAGGTACCTACCTGCCGGATCTGTCAAATTGCAGTGACTCAATT
GCGCGTCTGCCCTGCGTTGACTGCGGTCCCTGCCCTGCTATCTCGTGGAG
ACTCCTTGTGGTGTGCATGTCAGCAGAAGCATGACCTCATCCAGCCTTCA
TCAGCTTGGTGAGTTCACATTCAACTTCAACTCAACAAACTTCTAGTTCA
TTTACCTCATCGCTTTGATGACGAGGACCTGCATGTCAGCCCGAGTTCAT
TTATTTCAAGAAATTCTTGCCCCAGACCGGACTTCGTTGAACTTAACCGT
TTTTCAACCGTTTTTCGGCACTCACACAACTTCAATGCTTCGGTGCAATT
TGGGGGTATAAAAAAAACCAATGGGGATGGTAAATGGTCTCTTGCATCGA
CTTTGATAGGGCGTTGAGGGTTGAGCGATTGGTGGCTGCAGCAAGGACGC
GCAGCTGTATCGGAGCACACCTTCGCCTCTCCTTCGGACACCTGGTCCGC
GAGGGAAAGGGGCAATGAGGGCGGCCATTAAGTTGTGTTTGGCCATTGCA
GCGTGTACAAGGACAGCAGAGGCGTGCGGCTGCGATACAGGCGCAATTGC
GTGTCCTGCCGGCTGCGATCCTGCGCAGTGCGAGACGGAGCCGGTGGCGT
GCGACTGCAAGACGGGGTGCACAGCGGGAGGGTGCGATGAGGGATTTGTG
GTAAGCTGTCGACTGCTGATTATATCATCTGGAGACGATGATGAGGACTT
TGGACATGGAAAGTGGTGGCCTAGTGCCAGCTCGCCTCCAGCGACACCCT
CGCTTGCTATTTGCTGCTTGCCGACTACAGTGTCATGGCAAGTGTTTGTC
CGCCGCCAAGAGCAATCACGTGTCCCCGGCATTTGGCAAGCACAGCGCCG
TGTACGCAAGCCTGCCTGAAACTGCATGCAGGTACGCATGCAGAAAAGCT
GGTTGAGAGCGGCCAGAAGTCAAGCGCCTGTCTGGTGCCGCCGTAGCGTA
CGCTTTGTGTCCGCGAGCCAAGCACTCGAAGTTGCCATTGCGCACGTTTA
TGCAGCAACTCAATCAGCAGCAGCTCTTGACCTGGCAGCAAACAAGTAAA
CATGTACTCTTGCATTCGAAATGTATTCTTGTGCCATCTGCAGACGTCAA
GACAGGCCTGCAGAGGTGTGCAAACGGCAACTTCAACAGTGACATCATCT
CAAAACATTCATACACTGTAGTGCGAATTGCTGGACATCATGATGTTTAC
GCAAACTCAGCAGATGCAATCAATGTCGTAATCAGAGCATGGCAGGGTTT
TACTCACAATGTTCAAAAGGTTAAGATGAAATTTCGCCAGCAGCAACCAC
CTCGTGACAGCAGTGATGCTTGCAGTACAATTGCTTTCCTTTGCCGCGCC
CTCAGCGAGAATTGATAATTGGTACAATCACTCCACCGCTGAAAGCAGTT
GCGGTGTCGCGACTCGCGACATAGCGCGCTCTCAATGCACACCTATCGCC
ACTCAGTCCACATGCAAATCAGGGTTGCGCGACGCCCATTGGTGTCAGTC
GCTCATCCGCTGCATGCAGGCAAAGCGTTTTTGCCTAGCAGCAATGATAG
TGTTCGTTGCCGATGTTGCATGCACGTGCACTGCAAAAAGTTGAAGTATA
CCATGCTCTTGAGTGCTACAAAATCTCACGTTTTCGTTCGTATTCTTTGT
CAATTTAACACACGCTTGTGTACGACTATGCCGCCATGCCTTCTGGGACA
AAGCACGTGGTTCATGAATCCATGCGTATATAACGACCTACGCCAGCCTT
CCGCCGCGTCGTTGCCCGCCATTGTGTACCGCGCTCTTCGCACTCATGCA
ACTTCAACAAGCACTTCAAGTGTGCCGCGCGTGGCGTGCTGGCGCGTTGC
AACTTGCTAACCCTAACCCTACTTGCACGCAGGCATGTGCTCCGCGCCGC
CCACAGTGGGCCCCACACCAGTGCTCCCGATAGGCGCCGGCAACAGCACG
CGCAACTTTTACGTTGTTCACATGGTGCATCCACTTTGAAAATAGTGCAT
GGTGCATCCATTTTGACTATAGTGCATGTACAGAATCGTCGATGAAGATT
TCAATCACAGATAGAGCAGGTGATGCTCCGTTGGGCTTCCCGCCCAAATC
TACGCATACACGTGAAATCTGCCACATGCCGTCTTGCATGTTGTGTTGTA
TACTCTCCGCGCTATGCGCTGATGCGCATTCACCCAACCCCCCACCCCTG
CCCCCTCTGGAGGTCGGAAAGCAGTGGTGCCTCTTTGCCAACATAGAGAC
GTGCGAGCTGACGCAGGACTCCTTTGTAATTTCGTGATGATTTCAAATCG
TCCACTTCACATATTTTCTGGCTGTGACCCGTATTTGCGACCCCCCCCCC
CCCCTCCCCCCCCTCTCAGGAGGTCGGAAAGCAGTGGTGCTTGGTTGCCA
ACATCGCGACATGCGAGCTGACTCAGGAACCCTCTTTACACTAACGAAAC
GACAAACTTCAAAGTACTATACATTTTTCTGACCTTGACCGTGCTTACCC
CCCCCCCCCCCCCCCCCCTCTCAGGAGGTTGGAAAGCAGTGGTGCGTCTT
TGCCAACATCGAGACGTGCGAGCTGACCCAGGACTCCTTTGTAGCGTGCG
GCGCGTGCCTACCGGGCTTCTATGGTGCACAGTGCGCGCCCTGCGCCTGT
GGCAAGGGCTTCCTTTGTGACGATGGCGTTGCCGGAACGGGCGCTTGCGT
CAAGATTACGCCCGCGCCAACTCCCGCGCCTACTCCTGCGCCGACTCCAG
GTTTGTACCATATGTGATGAACTTCAATCTGTAGCATTGGCTGCAATCAC
AGATGGAATGGACGCGTGCATTAAGATTACGCTCGCACCTACGTTTGCCC
TACGCCCGCGCCGACTGGTGCGCGCGCGTGTGTGTGTATGTGTGTAGTTT
CATCGAGTTGTGGCGCTGATTTGACGGTGCCTCAAACGTGTAATGCTTTG
CGCCCTTTTATACCTTAGTAGAGTACCACATATATACCCTTGAAGGGTAC
CAAGTCGCAGAAGAGTACCGGGTGAAGTCGCAAAAGAGTACCGGGTAAAT
ACGACTCTTTAACAATGGCAACGGTTAGACGGGTGATTGAGTCACAACCG
CAGATGGGGAGCTTGCGTGAAACGGGGTCTGCACTCCGATGACTTTCCCA
AACCCCCTAAATTCTAAGCCTAACCCTCGCCCAGACGCCAACCCGCTGGC
TACGGCGCGCTCAGAGCTATTTCTAACCCCAAACCTGGCTACGGCAGCGT
GCACAGCTCACCTAAGCCTGCCATTACTGTACTCAGCCCAACACCCCAGT
GGACGCCTGCATCAGCACCCGACTCACTGCTGCCAATACTTGTTCAACTG
CCGGTCCAACTCTAACCAACTTCAACTATCCCCCTCGGTGACGCTCCCAA
CCCGCAGCGCCGACGCCGGCCCCCACCCCCGCGCCCACCGCCACTAGCTT
GTCCGAATGTGCCAGTATAAGTTCAACCAACTTCAACTATCCCCTTCGAT
GACGCTCCTCCCCTGCTCGTTGACGCTCCTTCCCCACAGCGCCCACTCCT
GCGCCGACTCCCGCGCCGACACCAGGTGCGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCATGTGTGTGTATT
TTCATCGAGTTGTGGCGCTGAATTGACGGTGGCTCAAACATGTAATGCTT
TGGAACCTTGTACACCATTGGTGAGTACCACATATATACCTTGGAAGGGT
ACCAGGTCTTAGAAGAGTACCGGGTAAAAGGACTCTGTGACGATGGCATC
GGTTGGACGGGTGATTGAGTCACAATCGCAGATGGGGAGCTTGCGTGAAA
CGGGGTCTGCACTCCGATGACAAACCCGAATCTCCTAAATTCTAATGCTA
ACCCTCGCTTAGACGCCAACCAGCTAGCTACGGCGCGCTCAGAGCAAACC
GTAACCCCAAACCTGGCTGTGGCAGCGCGCACAGCTCACCTAAGCCTACC
ATCACTGTACTCAGTCCAACACCCCAGTGGACGCCTGCAGCAGTACCCAA
CTCAACGCCACCGATACTTGTTCAACTGCCGGTTGAACTCTTATCAACTT
CAACTGGCTCCCTCGGTGACGCTCCCCCCACCCTCGCAGCGCCGACGCCG
GCCCCCACGCCGGCGCCCACCGCGGCCCCCACCGCCGCGCCGACGGTAGC
AGCGCCGCCGGTGGCAGCGGCAGACAACGGCGCGCCGGGCATCGGCGACA
CCGCCAGCGGCGGCAGCGGCGGCGGCGGCGGCGGCGGCAGCAGCGCCGGC
GTGACGGCGGCGTGGGCGTCCGTGCTGAGCGTTGCTGTCGTGGGCGCTGC
CGCCGGCGGCGCCGTGTTCACGTACCGGCGGCGGAAGAACATGGAGGCGG
CGGCGCCGGCGGTCATGCCATAGGCAGGTGGCGGCCAGGGCAGTGGCGGT
GGCGGCGGCGGCGGTGCTGCTGCTGCGGCGGCGGTGGCGGCGATGGTGGC
AATGGTTGCTGCACCAGCGGCCGCAGCGGCGGCGACGGCAATGGCTGCTG
CTTCTGCTGGTGCTGCGATGGCGGCGGTGGCGATGATAGCTGCTGCTGCT
GCTGCTGCTGCTGCTGCTGCGATGACAACAGCGGCGGCAGCGGCAGCGGT
TGCTGCTGCTGCTGCTGCTGCAGCAACGGCGGCGGCGGCGGCAGCAGCAG
CATGCTGAGCAATGCTCACTGCACCATCACAGGTGCACAACGGCTGGGGT
ACCGCCAGCCACAATCGTCACCGAGCACCTATGCACGCGGCACATGAAAC
GCACGCCTCTTGAGGCGTGTGTGCCTGTGCCCCATGCGCCGACACACCTT
CAAGTCTCATACACCC

Coding sequence (CDS) from alignment at Contig_24:333587..341052-

>mRNA_7494 ID=mRNA_7494|Name=jgi.p|Trimin1|348420|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1206bp|location=Sequence derived from alignment at Contig_24:333587..341052- (Tribonema minus UTEX_B_3156 )
ATGTTCACCACGATTACCGTGGCTGCGGCCCTCTGCCTCGTGGCATCGCC
GCTCGTCAGCGCGGGGTCCGCTCCCATTCCGCATGCGCAGAGGGATCTGG
CCGAATCGTGTTTCATCTACAAAAACGCGGGACTGCCCCCCAGTTTGGCC
CAGCAACTTGACCTCTTCAAGGAACCAGTCCGTGTGTTTTGCGACGCGGC
CCTCGCCGCCCTCGACGCTGGGGCGTATCAGACCAAGGCTGTCAACGCCC
CTGACCCGTGTGACGAGTGCGAGACGGAGCCGGTGGCGTGCGACTGCAAG
ACGGGGTGCACAGCGGGAGGGTGCGATGAGGGATTTGTGGTCGGAAAGCA
GTGGTGCCTCTTTGCCAACATAGAGACGTGCGAGCTGACGCAGGACTCCT
TTGAGGTTGGAAAGCAGTGGTGCGTCTTTGCCAACATCGAGACGTGCGAG
CTGACCCAGGACTCCTTTGTAGCGTGCGGCGCGTGCCTACCGGGCTTCTA
TGGTGCACAGTGCGCGCCCTGCGCCTGTGGCAAGGGCTTCCTTTGTGACG
ATGGCGTTGCCGGAACGGGCGCTTGCGTCAAGATTACGCCCGCGCCAACT
CCCGCGCCTACTCCTGCGCCGACTCCAGCGCCCACTCCTGCGCCGACTCC
CGCGCCGACACCAGCGCCGACGCCGGCCCCCACGCCGGCGCCCACCGCGG
CCCCCACCGCCGCGCCGACGGTAGCAGCGCCGCCGGTGGCAGCGGCAGAC
AACGGCGCGCCGGGCATCGGCGACACCGCCAGCGGCGGCAGCGGCGGCGG
CGGCGGCGGCGGCAGCAGCGCCGGCGTGACGGCGGCGTGGGCGTCCGTGC
TGAGCGTTGCTGTCGTGGGCGCTGCCGCCGGCGGCGCCGTGTTCACGTAC
CGGCGGCGGAAGAACATGGAGGCGGCGGCGCCGGCGGGCAGTGGCGGTGG
CGGCGGCGGCGGTGCTGCTGCTGCGGCGGCGGTGGCGGCGATGGTGGCAA
TGGTTGCTGCACCAGCGGCCGCAGCGGCGGCGACGGCAATGGCTGCTGCT
TCTGCTGGTGCTGCGATGGCGGCGGTGGCGATGATAGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCTGCGATGACAACAGCGGCGGCAGCGGCAGCGGTTG
CTGCTGCTGCTGCTGCTGCAGCAACGGCGGCGGCGGCGGCAGCAGCAGCA
TGCTGA