Trimin1|348225|estExt_Genemark1.C_Ctg_210039 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348225
Unique NameTrimin1|348225|estExt_Genemark1.C_Ctg_210039
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length96
Homology
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BLAST of jgi.p|Trimin1|348225 vs. uniprot
Match: A0A835Z1A9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1A9_9STRA)

HSP 1 Score: 188 bits (477), Expect = 1.850e-60
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 
Query:    1 MTGGGTAKDVAQEMLLDGVALWKMEPEAVKDLAIDEKGTSVTGAAGLTKGKALAVVMHRYNTGQQIYQTVLPSIHPAGYRPVTLKAVQRPPPSSA 95
            MTGGGTAKDVAQEMLLDGVALWKMEPEAVKDLAIDEKGTSVTGAAGLTKGKALAVVMHRYNTGQQIYQTVLPSIHPAGYRPVTLKAVQRPPPSSA
Sbjct:    1 MTGGGTAKDVAQEMLLDGVALWKMEPEAVKDLAIDEKGTSVTGAAGLTKGKALAVVMHRYNTGQQIYQTVLPSIHPAGYRPVTLKAVQRPPPSSA 95
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BLAST of jgi.p|Trimin1|348225 vs. uniprot
Match: A0A836CK79_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK79_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.700e-44
Identity = 81/88 (92.05%), Postives = 84/88 (95.45%), Query Frame = 0 
Query:    8 KDVAQEMLLDGVALWKMEPEAVKDLAIDEKGTSVTGAAGLTKGKALAVVMHRYNTGQQIYQTVLPSIHPAGYRPVTLKAVQRPPPSSA 95
            KD A++M LDGVALWKM+PEAVKDLAIDEKGTSVTG AGLTKGKALAVVM RYNTGQQIYQTVLPSIHPAGYRPVTLKAVQRPPPSSA
Sbjct:  531 KDFARQMQLDGVALWKMKPEAVKDLAIDEKGTSVTGTAGLTKGKALAVVMDRYNTGQQIYQTVLPSIHPAGYRPVTLKAVQRPPPSSA 618
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348225 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835Z1A9_9STRA1.850e-60100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CK79_9STRA1.700e-4492.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_21contigContig_21:374404..375463 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348225mRNA_7150Tribonema minus UTEX_B_3156 mRNAContig_21 374404..375553 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348225|estExt_Genemark1.C_Ctg_210039 ID=Trimin1|348225|estExt_Genemark1.C_Ctg_210039|Name=jgi.p|Trimin1|348225|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=96bp
MTGGGTAKDVAQEMLLDGVALWKMEPEAVKDLAIDEKGTSVTGAAGLTKG
KALAVVMHRYNTGQQIYQTVLPSIHPAGYRPVTLKAVQRPPPSSA*
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