Trimin1|348056|estExt_Genemark1.C_Ctg_190043 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348056
Unique NameTrimin1|348056|estExt_Genemark1.C_Ctg_190043
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length290
Homology
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: A0A835Z5J6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5J6_9STRA)

HSP 1 Score: 536 bits (1381), Expect = 6.390e-192
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0
Query:    1 MGFSKCIGALSLLLCTSSSNAVPHAELKVADEVHSRSGSDVHFKKLAAKGDRYTVKDKTVHMSIEKGDVNGSNICSGNFVAMSVRLERFSYDSSEPDNSFSGSSVRVSFDKGTYRDCTDAELSTTSLSYSSSNPCCSNTTSLYGYENIDSGVGTFKLGLTSQNLITAKATVTVPLYDSSXXXXXXXXXXXXXVKAATAKVTLKIDCTDSLNYQVTLTGDRCVRGDCVSSSAEQNDYWCTTKLDGAALTGTIGVQGKGLNQPKIDLANLPAGYTLVARTDFYTEDGKTIA 289
            MGFSKCIGALSLLLCTSSSNAVPHAELKVADEVHSRSGSDVHFKKLAAKGDRYTVKDKTVHMSIEKGDVNGSNICSGNFVAMSVRLERFSYDSSEPDNSFSGSSVRVSFDKGTYRDCTDAELSTTSLSYSSSNPCCSNTTSLYGYENIDSGVGTFKLGLTSQNLITAKATVTVPLYDSSXXXXXXXXXXXXXVKAATAKVTLKIDCTDSLNYQVTLTGDRCVRGDCVSSSAEQNDYWCTTKLDGAALTGTIGVQGKGLNQPKIDLANLPAGYTLVARTDFYTEDGKTIA
Sbjct:    1 MGFSKCIGALSLLLCTSSSNAVPHAELKVADEVHSRSGSDVHFKKLAAKGDRYTVKDKTVHMSIEKGDVNGSNICSGNFVAMSVRLERFSYDSSEPDNSFSGSSVRVSFDKGTYRDCTDAELSTTSLSYSSSNPCCSNTTSLYGYENIDSGVGTFKLGLTSQNLITAKATVTVPLYDSSXXXXXXXXXXXXXVKAATAKVTLKIDCTDSLNYQVTLTGDRCVRGDCVSSSAEQNDYWCTTKLDGAALTGTIGVQGKGLNQPKIDLANLPAGYTLVARTDFYTEDGKTIA 289          
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: A0A836CFS2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFS2_9STRA)

HSP 1 Score: 227 bits (578), Expect = 6.700e-70
Identity = 139/285 (48.77%), Postives = 192/285 (67.37%), Query Frame = 0
Query:    7 IGALSLLLCTSSSNAVPHAELKVADEVHSRSGSDVHFKKLAAKGDRYTVKDKTVHMSIEKGDVNGSNICSGNFVAMSVRLERFSYDSSEPDNSFSGSSVRVSFDKGTYRDCTDAELSTTSLS-YSSSNPCCSNTTSLYGYENIDSGVGTFKLGLTSQNLITAKATVTVPLYDSSXXXXXXXXXXXXXVK----AATAKVTLKIDCTDSLNYQVTLTGDRCVRGDCVSSSAEQNDYWCTTKLDGAALTGTIGVQGKGLNQPKIDLANLPAGYTLVARTDFYTEDGK 286
            +  L LLLCT S N      +  A +  ++ G+ + F KLAA GD Y    K+V +++E GDVNGSN+C G FV +++R+ R +Y+S+  DN++S  SV VS+ KG YR CTD E+ST+S   YS+   CCS+  +L G E+I +  G+++  L+ Q+LIT+   + +PL +++XXXXXXXXXXXXX        TA VTL +DC ++++   T T D C RG+CVSSS +QN YWCT KL+ A +TGT+ V+G+GLNQPKIDLA LPAGYT+ AR DF  E GK
Sbjct:   11 LSLLLLLLCTPSPN------VNAAPDGEAQHGAGLRFDKLAAVGDWYKSTSKSVVLTVENGDVNGSNVCFGTFVEINLRVSRNAYNSNVKDNNYSYGSVHVSYTKGAYRPCTDQEVSTSSYGIYSTDTTCCSDVVTLSGEESI-AKAGSWQFDLSKQDLITSTLNINIPLQENAXXXXXXXXXXXXXXXXEPATGTAVVTLNVDCVNAISRHSTTTADSCTRGECVSSSGQQNKYWCTKKLNDAKVTGTVRVRGQGLNQPKIDLAKLPAGYTVAARADFDVETGK 288          
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: A0A835Z0L8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0L8_9STRA)

HSP 1 Score: 212 bits (539), Expect = 2.730e-64
Identity = 125/275 (45.45%), Postives = 172/275 (62.55%), Query Frame = 0
Query:   12 LLLCTSSSNAVPHAELKVADEVHSRSGSDVHFKKLAAKGDRYTVKDKTVHMSIEKGDVNGSNICSGNFVAMSVRLERFSYDSSEPDNSFSGSSVRVSFDKGTYRDCTDAELSTTSLSYSSSNPCCSNTTSLYGYENIDSGVGTFKLGLTSQNLITAKATVTVPLYDSSXXXXXXXXXXXXXVKAATAKVTLKIDCTDSLNYQVTLTGDRCVRGDCVSSSAEQNDYWCTTKLDGAALTGTIGVQGKGLNQPKIDLANLPAGYTLVARTDFYTEDGK 286
            LLL TSS +    +  +V  +     G+ + F +LA  GD Y    K V + +EKGDVNGS+ CSG FV MS+ + R +YDS+  D + S SSV   + KG++RDCTD+E++T+S  Y +S  CCS+  SL G  +I   VGTFKLGL  Q LIT+  +V +PL+  S               AATA V   IDC + +N  VTL GD C RG+C S++ +Q++YWCTTKL  A +TGT+ +QG   +QPK+DLA LP+GYT+VAR D + ++GK
Sbjct:   11 LLLSTSSFSLKADSNSEVQHD-----GAALRFNQLATMGDWYKTTSKGVRLILEKGDVNGSSQCSGKFVEMSLHITRDTYDSNMSDETGSYSSVYFDYSKGSWRDCTDSEVTTSS--YFTSINCCSDRDSLSGSADIPE-VGTFKLGLGKQQLITSTTSVKIPLFAGSSTSSGE-------TPAATAVVKFNIDCDNLINRHVTLAGDACTRGECYSTTGQQDNYWCTTKLGDATVTGTVELQG--FSQPKLDLAKLPSGYTMVARADLFIDNGK 268          
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: A0A835Z906_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z906_9STRA)

HSP 1 Score: 210 bits (534), Expect = 1.880e-62
Identity = 122/232 (52.59%), Postives = 156/232 (67.24%), Query Frame = 0
Query:   60 VHMSIEKGDVNGSNICSGNFVAMSVRLERFSYDSSEPDNSFSGSSVRVSFDKGTYRDCTDAELSTTSLSYSSSNPCCSNTTSLYG-YENIDSGVGTFKLGLTSQN-LITAKATVTVPLYDSSXXXXXXXXXXXXXV---KAATAKVTLKIDCTDSLNYQVTLTGDRCVRGDCVSSSAEQNDYWCTTKLDGAALTGTIGVQGK---GLNQPKIDLANLPAGYTLVARTDFYTE 283
            +++SIEKGDVNGSNICSG FVAMS++L+ FSY S+ PD+ FS +++ V++ KG YR+C   EL++TS + SSSN CCS++TSLYG  E+I S VGTF LGL   + LITA A V VPLYDSS                  ++ A VTLK+DCT+ LN  VT  GD C RG+C+ SS +++ YWCTTK D AAL+GT  V  K      Q KI+LA LP GYTL AR   +T+
Sbjct:    1 MYVSIEKGDVNGSNICSGKFVAMSIQLDLFSYKSNVPDDDFSFNAIYVNYKKGKYRNCKPDELTSTSSAVSSSNSCCSDSTSLYGSVEDISSEVGTFTLGLKKDSELITAFAKVRVPLYDSSSTSSSHDEAPPALAATGSSSMALVTLKMDCTNVLNRHVTKAGDLCTRGECIHSSGQEDKYWCTTKWDDAALSGTFEVAVKFDPSRGQSKINLAKLPPGYTLRARAQTFTK 232          
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: A0A836C930_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C930_9STRA)

HSP 1 Score: 202 bits (515), Expect = 1.650e-60
Identity = 131/293 (44.71%), Postives = 169/293 (57.68%), Query Frame = 0
Query:    1 MGFSKCIGALSLLLCTSSSNAVPHAELKVADEVHSRSGSDVHFKKLAAKGDRYTVKDKTVHMSIEKGDVNGSNICSGNFVAMSVRLERFSYDSSEPDNSFSGSSVRVSFDKGTYRDCTDAELSTTSLS---YSSSNPCCSNTTSLYGYENIDSGVGTFKLGLTSQNLITAKATVTVPLYDSSXXXXXXXXXXXXXVKAATAKVTLKIDCTDSLNYQVTLTGDRCVRGDCVSSSAEQNDYWCTT--KLDGAALTGTIGVQGKGLNQPKIDLANLPAGYTLVARTDFYTEDGKTI 288
            +  S+C G LSLL+CT SS++          EV   +G    F KLAAKGD Y   +KTV MSIEKGDVNGSNICSG F +M++RL R+S D S+ D   S SSV +S+ +G +RDC   E ST++     Y     CCS+T  L GY ++   VG F+LGL    LITA A + VPL  +S                 TAKV+L++DC + +N      GD C+RGDCVSS+ EQ+  WC T    D A LTGTI + G    + K+DLA  P GYT+ AR DF  + GK +
Sbjct:    2 VSLSRCAGLLSLLMCTMSSSSAAEPTGNGGSEVQPGAGD--RFNKLAAKGDWYKDSNKTVRMSIEKGDVNGSNICSGKFASMNIRLTRYSSDRSDSDKC-SESSVSISYRRGMWRDCEPDETSTSTYGGGYYGFDKSCCSDTLHLTGYTSVPE-VGIFRLGL-KDKLITAVANIEVPLDQTSSSSSGDNTGGTI----VTAKVSLQMDCVNVINRHNIFAGDFCLRGDCVSSTGEQDINWCATAANTDDAVLTGTIELTGDV--KLKVDLAAPPTGYTVSARADFEADKGKVV 283          
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: A0A836C7V9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7V9_9STRA)

HSP 1 Score: 205 bits (522), Expect = 1.110e-58
Identity = 133/253 (52.57%), Postives = 159/253 (62.85%), Query Frame = 0
Query:   38 GSDVHFKKLAAKGDRYTVKDKTVHMSIEKGDVNGSNICSGNFVAMSVRLERFSYDSSEPDNSFSGSSVRVSFDKGTYRDCTDAELSTTSLSYSSSNPCCSNTTSLYGYENI-DSGVGTFKLGLTSQNLITAKATVTVPLYDSSXXXXXXXXXXXXXVKAATAKVTLKIDCTDSLNYQVTLTGDRCVRGDCVSSSAEQNDYWCTTKLDGAALTGTIGVQGKGLNQPKIDLANLPAGYTLVARTDFYTEDGKTIA 289
            G+   F KLAAKGD Y    K VH+S EKGDVNGSNICSG F +M + L R S DSS  D   S S V V + KGT+RDCT  E ST+S SYS+S  CC +  +L GY  + ++  GTFKLGL  + LITAK  V VPL  SS XXXX           ATA V L++DC + +N   T  GD CVRGDCVS + E + YWCTTK D A LTGTI +  KG     +DLA LPAGYT+ AR DF  ++GK I+
Sbjct:  307 GAGARFNKLAAKGDWYEDSYKEVHVSFEKGDVNGSNICSGRFASMYLGLHRSSSDSSV-DGKSSDSYVHVRYHKGTWRDCTPDETSTSS-SYSASGSCCRDRVTLSGYATLPEAPPGTFKLGLKGK-LITAKVDVAVPLDQSSSXXXXSNGASL----TATAVVKLQMDCVNVINRYTTQAGDSCVRGDCVSFTGEDDKYWCTTKADDATLTGTIEL--KGDIALTVDLAKLPAGYTMSARADFEADNGKVIS 550          
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: A0A835ZB26_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB26_9STRA)

HSP 1 Score: 157 bits (398), Expect = 1.210e-43
Identity = 87/183 (47.54%), Postives = 116/183 (63.39%), Query Frame = 0
Query:  107 VSFDKGTYRDCTDAELSTTSLSYSSSNPCCSNTTSLYGYENIDSGVGTFKLGLTSQNLITAKATVTVPLYDSSXXXXXXXXXXXXXVKAATAKVTLKIDCTDSLNYQVTLTGDRCVRGDCVSSSAEQNDYWCTTKLDGAALTGTIGVQGKGLNQPKIDLANLPAGYTLVARTDFYTEDGKTIA 289
            V+++KG +RDC   EL+T SL+Y +SNPCCS++ SL G+ NID  VG+F LGL  Q LITA A V VP+Y+ S             V  ATA + LK+ C + +N  V L G  C RGDCV+   +Q+ YWCT+K   AALTGT+ ++     + K+D+A LPAGYTLVAR D +T+  K  A
Sbjct:   52 VTYNKGAWRDCIGDELTTNSLAYYNSNPCCSDSVSLEGFGNIDPEVGSFTLGLKKQ-LITATANVKVPVYEVSSSSTSNSGDPQMPV--ATAVLALKLGCVNVINRHVALAGKSCTRGDCVTVKGDQSAYWCTSKAGDAALTGTMELRDHTKPKWKVDIAKLPAGYTLVARADLHTDTSKVTA 231          
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: A0A835Z8N6_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8N6_9STRA)

HSP 1 Score: 117 bits (293), Expect = 9.100e-26
Identity = 86/282 (30.50%), Postives = 138/282 (48.94%), Query Frame = 0
Query:    9 ALSLLLCTSSSNAVPHAELKVADEVHSRSGSDVHFKKLAAKGDRYTVKDKTVHMSIEKGDVNGSNICSGNFVAMSVRLERFSYDSSEPDNSFSGSSVRVSFDKGTYRDCTDAELSTTSLSYSSSNPCCSNTTSLYGYENIDSGVGTFKLGLTSQ-NLITAKATVTVPLYDSSXXXXXXXXXXXXXVKAATAKVTLKIDCTDSLNYQVTLTGDRCVRGDCVSSSAEQNDYWCTTKLDGAALTGTIGVQGKGLNQPKIDLANLPAGYTLVARTDFYTEDGKTIA 289
            AL L++  +++ A+     KVAD      G   H   LA  GD+Y    K + +SIEKG+VNGS+ C+G + A+++   R +   ++  N      +  ++     R+CT  EL   S S  S   CC ++T L G          FK+  T   NL  A+ + T+ L  +              V      V + + C   ++  VT TG+RC+   CVSS   +   +CT ++   ALTGT+ +  K L QP ++LA+LPAGY+++ R D + +  +T+A
Sbjct: 1152 ALGLMMAPAAAAALASTAEKVADP-----GFASHLGSLAGPGDKYKDVTKYLSVSIEKGNVNGSHSCTGQYTAINLFAVRDTVTGADSSNF---GYIEFAYRLAKRRECTADELENFSSSSDSPPECCEDSTDLGGIVFFPLAGSVFKVTPTQDGNLPLAQLSSTLTLQGTKTTKGKEVALPDSKVV-----VDVALQCQKRIDETVTYTGERCIGAKCVSSEGSRTHDYCTDRIKEGALTGTVDI--KYLKQPPLNLADLPAGYSVLGRADIFVDAAETVA 1418          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A835Z5J6_9STRA6.390e-192100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CFS2_9STRA6.700e-7048.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z0L8_9STRA2.730e-6445.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z906_9STRA1.880e-6252.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C930_9STRA1.650e-6044.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C7V9_9STRA1.110e-5852.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZB26_9STRA1.210e-4347.54Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z8N6_9STRA9.100e-2630.50SNF2 family N-terminal domain-containing protein n... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_19contigContig_19:363264..367221 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348056mRNA_5488Tribonema minus UTEX_B_3156 mRNAContig_19 363061..367221 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348056|estExt_Genemark1.C_Ctg_190043 ID=Trimin1|348056|estExt_Genemark1.C_Ctg_190043|Name=jgi.p|Trimin1|348056|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=290bp
MGFSKCIGALSLLLCTSSSNAVPHAELKVADEVHSRSGSDVHFKKLAAKG
DRYTVKDKTVHMSIEKGDVNGSNICSGNFVAMSVRLERFSYDSSEPDNSF
SGSSVRVSFDKGTYRDCTDAELSTTSLSYSSSNPCCSNTTSLYGYENIDS
GVGTFKLGLTSQNLITAKATVTVPLYDSSSSSTSSSGTSPPPVKAATAKV
TLKIDCTDSLNYQVTLTGDRCVRGDCVSSSAEQNDYWCTTKLDGAALTGT
IGVQGKGLNQPKIDLANLPAGYTLVARTDFYTEDGKTIA*
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