mRNA_5488 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: A0A835Z5J6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5J6_9STRA) HSP 1 Score: 535 bits (1379), Expect = 1.840e-190 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 1
Query: 1 MGFSKCIGALSLLLCTSSSNAVPHAELKVADEVHSRSGSDVHFKKLAAKGDRYTVKDKTVHMSIEKGDVNGSNICSGNFVAMSVRLERFSYDSSEPDNSFSGSSVRVSFDKGTYRDCTDAELSTTSLSYSSSNPCCSNTTSLYGYENIDSGVGTFKLGLTSQNLITAKATVTVPLYDSSXXXXXXXXXXXXXVKAATAKVTLKIDCTDSLNYQVTLTGDRCVRGDCVSSSAEQNDYWCTTKLDGAALTGTIGVQGKGLNQPKIDLANLPAGYTLVARTDFYTEDGKTIA 867
MGFSKCIGALSLLLCTSSSNAVPHAELKVADEVHSRSGSDVHFKKLAAKGDRYTVKDKTVHMSIEKGDVNGSNICSGNFVAMSVRLERFSYDSSEPDNSFSGSSVRVSFDKGTYRDCTDAELSTTSLSYSSSNPCCSNTTSLYGYENIDSGVGTFKLGLTSQNLITAKATVTVPLYDSSXXXXXXXXXXXXXVKAATAKVTLKIDCTDSLNYQVTLTGDRCVRGDCVSSSAEQNDYWCTTKLDGAALTGTIGVQGKGLNQPKIDLANLPAGYTLVARTDFYTEDGKTIA
Sbjct: 1 MGFSKCIGALSLLLCTSSSNAVPHAELKVADEVHSRSGSDVHFKKLAAKGDRYTVKDKTVHMSIEKGDVNGSNICSGNFVAMSVRLERFSYDSSEPDNSFSGSSVRVSFDKGTYRDCTDAELSTTSLSYSSSNPCCSNTTSLYGYENIDSGVGTFKLGLTSQNLITAKATVTVPLYDSSXXXXXXXXXXXXXVKAATAKVTLKIDCTDSLNYQVTLTGDRCVRGDCVSSSAEQNDYWCTTKLDGAALTGTIGVQGKGLNQPKIDLANLPAGYTLVARTDFYTEDGKTIA 289
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: A0A836CFS2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFS2_9STRA) HSP 1 Score: 226 bits (576), Expect = 1.210e-68 Identity = 139/285 (48.77%), Postives = 192/285 (67.37%), Query Frame = 1
Query: 19 IGALSLLLCTSSSNAVPHAELKVADEVHSRSGSDVHFKKLAAKGDRYTVKDKTVHMSIEKGDVNGSNICSGNFVAMSVRLERFSYDSSEPDNSFSGSSVRVSFDKGTYRDCTDAELSTTSLS-YSSSNPCCSNTTSLYGYENIDSGVGTFKLGLTSQNLITAKATVTVPLYDSSXXXXXXXXXXXXXVK----AATAKVTLKIDCTDSLNYQVTLTGDRCVRGDCVSSSAEQNDYWCTTKLDGAALTGTIGVQGKGLNQPKIDLANLPAGYTLVARTDFYTEDGK 858
+ L LLLCT S N + A + ++ G+ + F KLAA GD Y K+V +++E GDVNGSN+C G FV +++R+ R +Y+S+ DN++S SV VS+ KG YR CTD E+ST+S YS+ CCS+ +L G E+I + G+++ L+ Q+LIT+ + +PL +++XXXXXXXXXXXXX TA VTL +DC ++++ T T D C RG+CVSSS +QN YWCT KL+ A +TGT+ V+G+GLNQPKIDLA LPAGYT+ AR DF E GK
Sbjct: 11 LSLLLLLLCTPSPN------VNAAPDGEAQHGAGLRFDKLAAVGDWYKSTSKSVVLTVENGDVNGSNVCFGTFVEINLRVSRNAYNSNVKDNNYSYGSVHVSYTKGAYRPCTDQEVSTSSYGIYSTDTTCCSDVVTLSGEESI-AKAGSWQFDLSKQDLITSTLNINIPLQENAXXXXXXXXXXXXXXXXEPATGTAVVTLNVDCVNAISRHSTTTADSCTRGECVSSSGQQNKYWCTKKLNDAKVTGTVRVRGQGLNQPKIDLAKLPAGYTVAARADFDVETGK 288
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: A0A835Z0L8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0L8_9STRA) HSP 1 Score: 211 bits (537), Expect = 4.640e-63 Identity = 125/275 (45.45%), Postives = 172/275 (62.55%), Query Frame = 1
Query: 34 LLLCTSSSNAVPHAELKVADEVHSRSGSDVHFKKLAAKGDRYTVKDKTVHMSIEKGDVNGSNICSGNFVAMSVRLERFSYDSSEPDNSFSGSSVRVSFDKGTYRDCTDAELSTTSLSYSSSNPCCSNTTSLYGYENIDSGVGTFKLGLTSQNLITAKATVTVPLYDSSXXXXXXXXXXXXXVKAATAKVTLKIDCTDSLNYQVTLTGDRCVRGDCVSSSAEQNDYWCTTKLDGAALTGTIGVQGKGLNQPKIDLANLPAGYTLVARTDFYTEDGK 858
LLL TSS + + +V + G+ + F +LA GD Y K V + +EKGDVNGS+ CSG FV MS+ + R +YDS+ D + S SSV + KG++RDCTD+E++T+S Y +S CCS+ SL G +I VGTFKLGL Q LIT+ +V +PL+ S AATA V IDC + +N VTL GD C RG+C S++ +Q++YWCTTKL A +TGT+ +QG +QPK+DLA LP+GYT+VAR D + ++GK
Sbjct: 11 LLLSTSSFSLKADSNSEVQHD-----GAALRFNQLATMGDWYKTTSKGVRLILEKGDVNGSSQCSGKFVEMSLHITRDTYDSNMSDETGSYSSVYFDYSKGSWRDCTDSEVTTSS--YFTSINCCSDRDSLSGSADIPE-VGTFKLGLGKQQLITSTTSVKIPLFAGSSTSSGE-------TPAATAVVKFNIDCDNLINRHVTLAGDACTRGECYSTTGQQDNYWCTTKLGDATVTGTVELQG--FSQPKLDLAKLPSGYTMVARADLFIDNGK 268
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: A0A835Z906_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z906_9STRA) HSP 1 Score: 209 bits (533), Expect = 2.240e-61 Identity = 122/232 (52.59%), Postives = 156/232 (67.24%), Query Frame = 1
Query: 178 VHMSIEKGDVNGSNICSGNFVAMSVRLERFSYDSSEPDNSFSGSSVRVSFDKGTYRDCTDAELSTTSLSYSSSNPCCSNTTSLYG-YENIDSGVGTFKLGLTSQN-LITAKATVTVPLYDSSXXXXXXXXXXXXXV---KAATAKVTLKIDCTDSLNYQVTLTGDRCVRGDCVSSSAEQNDYWCTTKLDGAALTGTIGVQGK---GLNQPKIDLANLPAGYTLVARTDFYTE 849
+++SIEKGDVNGSNICSG FVAMS++L+ FSY S+ PD+ FS +++ V++ KG YR+C EL++TS + SSSN CCS++TSLYG E+I S VGTF LGL + LITA A V VPLYDSS ++ A VTLK+DCT+ LN VT GD C RG+C+ SS +++ YWCTTK D AAL+GT V K Q KI+LA LP GYTL AR +T+
Sbjct: 1 MYVSIEKGDVNGSNICSGKFVAMSIQLDLFSYKSNVPDDDFSFNAIYVNYKKGKYRNCKPDELTSTSSAVSSSNSCCSDSTSLYGSVEDISSEVGTFTLGLKKDSELITAFAKVRVPLYDSSSTSSSHDEAPPALAATGSSSMALVTLKMDCTNVLNRHVTKAGDLCTRGECIHSSGQEDKYWCTTKWDDAALSGTFEVAVKFDPSRGQSKINLAKLPPGYTLRARAQTFTK 232
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: A0A836C930_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C930_9STRA) HSP 1 Score: 202 bits (513), Expect = 2.690e-59 Identity = 131/293 (44.71%), Postives = 169/293 (57.68%), Query Frame = 1
Query: 1 MGFSKCIGALSLLLCTSSSNAVPHAELKVADEVHSRSGSDVHFKKLAAKGDRYTVKDKTVHMSIEKGDVNGSNICSGNFVAMSVRLERFSYDSSEPDNSFSGSSVRVSFDKGTYRDCTDAELSTTSLS---YSSSNPCCSNTTSLYGYENIDSGVGTFKLGLTSQNLITAKATVTVPLYDSSXXXXXXXXXXXXXVKAATAKVTLKIDCTDSLNYQVTLTGDRCVRGDCVSSSAEQNDYWCTT--KLDGAALTGTIGVQGKGLNQPKIDLANLPAGYTLVARTDFYTEDGKTI 864
+ S+C G LSLL+CT SS++ EV +G F KLAAKGD Y +KTV MSIEKGDVNGSNICSG F +M++RL R+S D S+ D S SSV +S+ +G +RDC E ST++ Y CCS+T L GY ++ VG F+LGL LITA A + VPL +S TAKV+L++DC + +N GD C+RGDCVSS+ EQ+ WC T D A LTGTI + G + K+DLA P GYT+ AR DF + GK +
Sbjct: 2 VSLSRCAGLLSLLMCTMSSSSAAEPTGNGGSEVQPGAGD--RFNKLAAKGDWYKDSNKTVRMSIEKGDVNGSNICSGKFASMNIRLTRYSSDRSDSDKC-SESSVSISYRRGMWRDCEPDETSTSTYGGGYYGFDKSCCSDTLHLTGYTSVPE-VGIFRLGL-KDKLITAVANIEVPLDQTSSSSSGDNTGGTI----VTAKVSLQMDCVNVINRHNIFAGDFCLRGDCVSSTGEQDINWCATAANTDDAVLTGTIELTGDV--KLKVDLAAPPTGYTVSARADFEADKGKVV 283
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: A0A836C7V9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7V9_9STRA) HSP 1 Score: 204 bits (520), Expect = 1.800e-57 Identity = 133/253 (52.57%), Postives = 159/253 (62.85%), Query Frame = 1
Query: 112 GSDVHFKKLAAKGDRYTVKDKTVHMSIEKGDVNGSNICSGNFVAMSVRLERFSYDSSEPDNSFSGSSVRVSFDKGTYRDCTDAELSTTSLSYSSSNPCCSNTTSLYGYENI-DSGVGTFKLGLTSQNLITAKATVTVPLYDSSXXXXXXXXXXXXXVKAATAKVTLKIDCTDSLNYQVTLTGDRCVRGDCVSSSAEQNDYWCTTKLDGAALTGTIGVQGKGLNQPKIDLANLPAGYTLVARTDFYTEDGKTIA 867
G+ F KLAAKGD Y K VH+S EKGDVNGSNICSG F +M + L R S DSS D S S V V + KGT+RDCT E ST+S SYS+S CC + +L GY + ++ GTFKLGL + LITAK V VPL SS XXXX ATA V L++DC + +N T GD CVRGDCVS + E + YWCTTK D A LTGTI + KG +DLA LPAGYT+ AR DF ++GK I+
Sbjct: 307 GAGARFNKLAAKGDWYEDSYKEVHVSFEKGDVNGSNICSGRFASMYLGLHRSSSDSSV-DGKSSDSYVHVRYHKGTWRDCTPDETSTSS-SYSASGSCCRDRVTLSGYATLPEAPPGTFKLGLKGK-LITAKVDVAVPLDQSSSXXXXSNGASL----TATAVVKLQMDCVNVINRYTTQAGDSCVRGDCVSFTGEDDKYWCTTKADDATLTGTIEL--KGDIALTVDLAKLPAGYTMSARADFEADNGKVIS 550
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: A0A835ZB26_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB26_9STRA) HSP 1 Score: 162 bits (411), Expect = 9.040e-45 Identity = 109/289 (37.72%), Postives = 150/289 (51.90%), Query Frame = 1
Query: 1 MGFSKCIGALSLLLCTSSSNAVPHAELKVADEVHSRSGSDVHFKKLAAKGDRYTVKDKTVHMSIEKGDVNGSNICSGNFVAMSVRLERFSYDSSEPDNSFSGSSVRVSFDKGTYRDCTDAELSTTSLSYSSSNPCCSNTTSLYGYENIDSGVGTFKLGLTSQNLITAKATVTVPLYDSSXXXXXXXXXXXXXVKAATAKVTLKIDCTDSLNYQVTLTGDRCVRGDCVSSSAEQNDYWCTTKLDGAALTGTIGVQGKGLNQPKIDLANLPAGYTLVARTDFYTEDGKTIA 867
MG S+C+GAL ++L S S A+PH E A++ + G + F +L+ + EKGD V+++KG +RDC EL+T SL+Y +SNPCCS++ SL G+ NID VG+F LGL Q LITA A V VP+Y+ S V ATA + LK+ C + +N V L G C RGDCV+ +Q+ YWCT+K AALTGT+ ++ + K+D+A LPAGYTLVAR D +T+ K A
Sbjct: 1 MGLSRCVGALCIILLLSVS-AMPHTE---ANDSEVQPGPGLRFNELSEQA--------------EKGDC-------------------------------------VTYNKGAWRDCIGDELTTNSLAYYNSNPCCSDSVSLEGFGNIDPEVGSFTLGLKKQ-LITATANVKVPVYEVSSSSTSNSGDPQMPV--ATAVLALKLGCVNVINRHVALAGKSCTRGDCVTVKGDQSAYWCTSKAGDAALTGTMELRDHTKPKWKVDIAKLPAGYTLVARADLHTDTSKVTA 231
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: A0A835Z8N6_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8N6_9STRA) HSP 1 Score: 116 bits (291), Expect = 8.050e-25 Identity = 86/282 (30.50%), Postives = 138/282 (48.94%), Query Frame = 1
Query: 25 ALSLLLCTSSSNAVPHAELKVADEVHSRSGSDVHFKKLAAKGDRYTVKDKTVHMSIEKGDVNGSNICSGNFVAMSVRLERFSYDSSEPDNSFSGSSVRVSFDKGTYRDCTDAELSTTSLSYSSSNPCCSNTTSLYGYENIDSGVGTFKLGLTSQ-NLITAKATVTVPLYDSSXXXXXXXXXXXXXVKAATAKVTLKIDCTDSLNYQVTLTGDRCVRGDCVSSSAEQNDYWCTTKLDGAALTGTIGVQGKGLNQPKIDLANLPAGYTLVARTDFYTEDGKTIA 867
AL L++ +++ A+ KVAD G H LA GD+Y K + +SIEKG+VNGS+ C+G + A+++ R + ++ N + ++ R+CT EL S S S CC ++T L G FK+ T NL A+ + T+ L + V V + + C ++ VT TG+RC+ CVSS + +CT ++ ALTGT+ + K L QP ++LA+LPAGY+++ R D + + +T+A
Sbjct: 1152 ALGLMMAPAAAAALASTAEKVADP-----GFASHLGSLAGPGDKYKDVTKYLSVSIEKGNVNGSHSCTGQYTAINLFAVRDTVTGADSSNF---GYIEFAYRLAKRRECTADELENFSSSSDSPPECCEDSTDLGGIVFFPLAGSVFKVTPTQDGNLPLAQLSSTLTLQGTKTTKGKEVALPDSKVV-----VDVALQCQKRIDETVTYTGERCIGAKCVSSEGSRTHDYCTDRIKEGALTGTVDI--KYLKQPPLNLADLPAGYSVLGRADIFVDAAETVA 1418
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: A0A835Z8S9_9STRA (Thioredoxin-like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8S9_9STRA) HSP 1 Score: 541 bits (1393), Expect = 2.440e-191 Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 3
Query: 39 MASNDILAMLGTGDLVGPKGNTVPISSLAGKSLALYFSAHWCPPCRMFTPALVKVYEAMRAAGRDDFEFIFLSSDRSEAQFDEYRATMPWLSLPYAKRDEKTALSTRFRVTGIPSLITVAPDGTVVNAGARGAAMEDPTGAAFPWPPQPLSNLEMTTECNGLTINDAPALVAFLEGCDDIEQREAIDGALRPAAEAAXXXXXXXXXXXXXVQLWFYAAGSGGVVQRVRTMCGLGAASADAGAQMLILDLPDRGAYYVSDASEVTPETLAAFVGAFNDGKRGLTRKQLS 902
MASNDILAMLGTGDLVGPKGNTVPISSLAGKSLALYFSAHWCPPCRMFTPALVKVYEAMRAAGRDDFEFIFLSSDRSEAQFDEYRATMPWLSLPYAKRDEKTALSTRFRVTGIPSLITVAPDGTVVNAGARGAAMEDPTGAAFPWPPQPLSNLEMTTECNGLTINDAPALVAFLEGCDDIEQREAIDGALRPAAEAAXXXXXXXXXXXXXVQLWFYAAGSGGVVQRVRTMCGLGAASADAGAQMLILDLPDRGAYYVSDASEVTPETLAAFVGAFNDGKRGLTRKQLS
Sbjct: 1 MASNDILAMLGTGDLVGPKGNTVPISSLAGKSLALYFSAHWCPPCRMFTPALVKVYEAMRAAGRDDFEFIFLSSDRSEAQFDEYRATMPWLSLPYAKRDEKTALSTRFRVTGIPSLITVAPDGTVVNAGARGAAMEDPTGAAFPWPPQPLSNLEMTTECNGLTINDAPALVAFLEGCDDIEQREAIDGALRPAAEAAXXXXXXXXXXXXXVQLWFYAAGSGGVVQRVRTMCGLGAASADAGAQMLILDLPDRGAYYVSDASEVTPETLAAFVGAFNDGKRGLTRKQLS 288
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: A0A8J5XBT9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XBT9_DIALT) HSP 1 Score: 218 bits (555), Expect = 7.350e-63 Identity = 126/300 (42.00%), Postives = 175/300 (58.33%), Query Frame = 3
Query: 6 WPPRLSIERDTMASNDILAMLGTGDLVGPKGNTVPISSLAGKS-LALYFSAHWCPPCRMFTPALVKVYEAMRAAGRDDFEFIFLSSDRSEAQFDEYRATMPWLSLPYAKRDEKTALSTRFRVTGIPSLITVAPDGTVVNAGARGAAMEDPTGAAFPWPPQPLSNLEMTTECNGLTINDAPALVAFLEGCDDIEQREAIDGALRPAAEAAXXXXXXXXXXXXXVQLWFYAAGSGGVVQRVRTMCGLGAASADAGAQMLILDLPDRGAYYVSDASEVTPETLAAFVGAFNDGKRGLTRKQLS 902
WP + + D + D A L T G G+ V + L GK L +YFSAHWCPPC+ FTP L++VY+A++ +GRDDFEF+F+SSDRS +F EY + PWL +P K ALS RF V GIP+ + + G +NA ARGA M DPTGA FPW P+P ++LE + +N+ P++VA LEG D+ QREAI +R A A +FYA + V +VR + G A++ A +L+LD+PD G YYV DA +VT +L A + + G + LTR+Q++
Sbjct: 142 WPQKSVL--DLLGGAD--AQLLTSPAAGGDGDDVRVGELWGKKKLGVYFSAHWCPPCKAFTPKLIEVYKALKQSGRDDFEFVFVSSDRSTNEFSEYFGSQPWLGIPPGD-PRKAALSRRFGVEGIPTFVMLDERGATINANARGAVMADPTGARFPWAPEPAADLEDGPD----GLNETPSVVALLEGLDEAAQREAIAAVIRVAK--ATRESSRAAGEDESPFCFFYATAAANVTLQVRKLTGQPASAPKGHATLLLLDIPDDGGYYVGDAHDVTDASLKALLADY--GAKKLTRQQMA 428
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: A0A6V1NWZ1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NWZ1_HETAK) HSP 1 Score: 214 bits (546), Expect = 1.120e-61 Identity = 122/277 (44.04%), Postives = 164/277 (59.21%), Query Frame = 3
Query: 75 GDLVGPKGNTVPISSLAGKSLALYFSAHWCPPCRMFTPALVKVYEAMRAAGRDDFEFIFLSSDRSEAQFDEYRATMPWLSLPYA-KRDEKTALSTRFRVTGIPSLITVAPDGTVVNAGARGAAMEDPTGAAFPWPPQPLSNLEMTTECNGLTINDAPALVAFLEGCDDIEQREAIDGALRPAAEAAXXXXXXXXXXXXXVQLWFYAAGSGGVVQRVRTMCGLGAASADAGAQMLILDLPDRGAYYVSDASEVTPETLAAFVGAFNDGKRGLTRKQLS 902
GD K TV S + GK+L +YFSAHWC PCR FTP L KVY ++ G+++FE IF+S D+S++QF+EY MPWL++PY KR ++ L+ RF V GIP L+ + PDGTV+NA ARG D FPW P+P+ +L +T EC G IN+ P+LV F+EG DD++Q EA L A E A L+F A G G + +VR M GL + M++LD+PD G YY SDA E+ +T+ F + K TR+QLS
Sbjct: 150 GDEFKGKEGTVGRSVIEGKTLGIYFSAHWCGPCRGFTPTLAKVYNKLKEKGQNNFEVIFVSGDKSDSQFEEYYGEMPWLAIPYGDKRIDQ--LNQRFEVNGIPHLVILNPDGTVLNASARGKIDADENAENFPWAPEPMEDLGVTAECMGSDINEKPSLVLFMEGVDDLQQDEAWAAGLAVAREFAARGGGDGPAL-----LFFGARGGGRIPPQVRRMTGL--PEQEEKISMVVLDIPDSGGYYKSDAEEINEQTVRDFAENY---KTLATRQQLS 414
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: D8LC01_ECTSI (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC01_ECTSI) HSP 1 Score: 193 bits (490), Expect = 2.590e-53 Identity = 109/284 (38.38%), Postives = 166/284 (58.45%), Query Frame = 3
Query: 63 MLGTGDLVGPKGNTVPISSLAGKSLALYFSAHWCPPCRMFTPALVKVYEAMRA-AGRDDFEFIFLSSDRSEAQFDEYRATMPWLSLPYAKRDEKTALSTRFRVTGIPSLITVAPDGTVVNAGARGAAMEDPTGAAFPWPPQPLSNLEMTTECNGLTINDAPALVAFLEGCDDIEQREAIDGALRPAAEAAXXXXXXXXXXXXXVQLWFYAAGSGGVVQRVRTMCGLGAASADAGAQMLILDLPDRGAYYVSD---ASEVTPETLAAFVGAFNDGKRGLTRKQLS 902
++GT + V G + GK+LALYFSAHWCPPCR FTP LV+ Y+ ++ AG DD EF+F+SSD+ +AQFD+Y MPW ++P+ + + AL+TR V GIP+L T+ DG V+N A+GAA+ D G FPW P+ + +L + ++ NG + + P+L+ F+E CDD++Q+E ++ AL P A A V ++F + +VR +C L + QM+I+++ GAY++ ++ V T+ FV A+ G L R QLS
Sbjct: 149 LIGT-EFVTKPGTLAGEEVVRGKTLALYFSAHWCPPCRAFTPRLVQTYKDLKKRAGSDDVEFLFVSSDKDQAQFDDYFREMPWAAIPFGDVNRRRALATRLGVRGIPTLTTIDRDGVVINQTAKGAAIADAKGLEFPWWPKAVEDLSVNSQSNGFHVQEMPSLIVFMEACDDVDQKE-VEEALLPIATAEAEAAKANGGQP--VLIFFTVKSEASLPTQVRNVCDL--KTVPDSPQMIIVNIQGNGAYHLPQGGISAPVNATTIRDFVEAYKSGA--LERFQLS 424
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: A0A7S0MU66_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MU66_9CHLO) HSP 1 Score: 187 bits (474), Expect = 3.870e-51 Identity = 121/285 (42.46%), Postives = 162/285 (56.84%), Query Frame = 3
Query: 54 ILAMLGTGDLVGPKGNTVPISSL--AGKSLALYFSAHWCPPCRMFTPALVKVYEAMRAAGRDDFEFIFLSSDRSEAQFDEYRATMPWLSLPYAKRDEKTALSTRFRVTGIPSLITVAPDGTVVNAGARGAAMEDPTGAAFPWPPQPLSNLEMTTECNGLTINDAPALVAFLE-GCDDIEQREAIDGALRPAAEAAXXXXXXXXXXXXXVQLWFYAAGSGGVVQRVRTMCGLGAASADAGAQMLILDLPDRGAYYVSDASEVTPETLAAFVGAFNDGKRGLTRKQL 899
I +LG+ +LV GN V + SL AG +ALYFSAHWC PCR FTP LVK Y A++AAG+ FE +F+SSDR EA F EY TMPWL+LP+ KR+ K LS+ V GIP+L+ + P V+N RG DP GA FPW P+ +S ++ E +N P L+ +E DD + EA AL AE A + +A +GG+ QR+R + LG A A +M++LDLPD GAYY + + VT E +AA + + G LT+ L
Sbjct: 141 IADVLGS-ELVSSGGNKVSVMSLKEAGTYIALYFSAHWCGPCRGFTPELVKTYNALKAAGKP-FEIVFVSSDRDEASFAEYFGTMPWLALPFDKREAKAELSSLLEVEGIPTLVMLDPSLKVLNRDGRGRVGSDPKGAEFPWAPRKVSPVDEVVE----ELNSTPTLLVLMEEAADDWDDLEA---ALEAVAEEALGSVPEEEDPPFT---FAHAQETGGIAQRIRQLLKLGKAGATP--EMVLLDLPDDGAYYKHEGA-VTKEAMAAMLQGYKAGS--LTKLSL 408
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: A0A7S0E2L2_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E2L2_9EUKA) HSP 1 Score: 181 bits (459), Expect = 5.800e-49 Identity = 116/271 (42.80%), Postives = 160/271 (59.04%), Query Frame = 3
Query: 96 GNTVPISSLAG--KSLALYFSAHWCPPCRMFTPALVKVYEAMRAAGRDDFEFIFLSSDRSEAQFDEYRATMPWLSLPYAKRDEKTALSTRFRVTGIPSLITV-APDGTVVNAGARGAAMEDPTGAAFPWPPQPLSNLEMTTECNGLTINDAPALVAFLEGCDDIEQREAIDGALRPAAEAAXXXXXXXXXXXXXVQLWFYAAGSGGVVQRVRTMCGLGAASADAGAQMLILDLPDRGAYYVSDASEVTPETLAAFVGAFNDGKRGLTRKQL 899
G TV +S+L G K + LYFSAHWCPPC+ FTP LV+ Y+ ++AAG++ FE +F+SSD+ QF EY ATMPWL++P + K ALSTRF V GIP+L+ V G +NA RGA DP G FPW P+ L+ +M + +GL ND + +EG E + A+ A+ AEAA +L+F A +G V +VR + LG A+A Q+ ILD+PD G +YV + V +++A+FV + G GL RKQL
Sbjct: 160 GETVELSALRGEGKVVGLYFSAHWCPPCKAFTPLLVETYKKVKAAGKE-FEVVFVSSDKDMGQFQEYFATMPWLAIPPGDK-RKAALSTRFEVEGIPALVLVDGATGETINAKGRGAVGGDPEGEEFPWRPKALN--DMASGADGL--NDEACVCVMMEGAP-AESQAALAAAMGVVAEAAKAAGGE--------ELYFVARAAGEVADQVRKLTKLGDAAA--APQLAILDIPDEGGFYVYEGM-VDADSIASFVAKYKAG--GLERKQL 410
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: R1C0K2_EMIHU (Uncharacterized protein n=4 Tax=Eukaryota TaxID=2759 RepID=R1C0K2_EMIHU) HSP 1 Score: 181 bits (458), Expect = 8.110e-49 Identity = 124/276 (44.93%), Postives = 160/276 (57.97%), Query Frame = 3
Query: 96 GNTVPISSLAG--KSLALYFSAHWCPPCRMFTPALVKVYEAMRAAGRDDFEFIFLSSDRSEAQFDEYRATMP--WLSLPYAKRDEKTALSTRFRVTGIPSLITV-APDGTVVNAGARGAAMEDPTGAAFPWPPQPLSNLEMTTECNGLTINDAPALVAFLEGCDDIEQREAIDGALRPAAEAAXXXXXXXXXXXXXVQLWFYAAGS--GGVVQRVRTMCGLG-AASADAGAQMLILDLPDRGAYYVSDASEVTPETLAAFVGAFNDGKRGLTRKQL 899
G+ +S L G K + LYFSAHWCPPCR FTP LVK ++AAG+ FE IF+SSDR + F EY +M +L++P K LS+ F V GIP+L+TV G +N ARGA DP G AFPW P+P+ ++ C+G IND +L LEGC +E ++A A P AEAA +L F+AA GG V ++R M LG A SA A M++LD+PD GAYYVSDA+E T T+ AF+ A+ G L RKQL
Sbjct: 155 GDAAEVSQLKGEGKVIVLYFSAHWCPPCRGFTPELVKTVGKLKAAGKA-FEIIFVSSDRDQKSFQEYFGSMGPHFLAIPQGD-PRKAKLSSFFGVEGIPTLVTVDGATGATINGNARGACGGDPDGLAFPWAPKPV--VDFADGCDG--INDTLSLCLLLEGCG-LEVQQAAIAAATPLAEAAKASQE---------ELCFFAATKVEGGPVSQIRQMTKLGDAGSAPA---MILLDIPDEGAYYVSDATEATATTIQAFLAAYKAGT--LDRKQL 409
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: F0YDG6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDG6_AURAN) HSP 1 Score: 179 bits (455), Expect = 5.320e-48 Identity = 125/293 (42.66%), Postives = 166/293 (56.66%), Query Frame = 3
Query: 9 PPRLSIERDTMASNDILAMLGTGDLVGPKGNTVPISSLAGKSLALYFSAHWCPPCRMFTPALVKVYEAMRAAGRDDFEFIFLSSDRSEAQFDEYRATM--PWLSLPYAKRDEKTALSTRFRVTGIPSLITVAPDGT-----VVNAGARGAAMEDPTGAAFP--WPPQPLSNLEMTTECNGLTINDAPALVAFLEGCDDIEQREAIDGALRPAAEAAXXXXXXXXXXXXXVQLWFYAAGSGGVVQRVRTMCGLGAASADAGAQMLILDLPDRGAYYVSDASEVTPETLAAFVGA 860
PP L R+T+A L L T GPK TV ++ +AG L +YFSAHWCPPCR FTP LV + ++AA D +F+SSD+ EA+FD Y A M W +LPYA RD+K ALS F V+GIPSL+ ++ G VV ARG E FP W P+P ++L ECNG +N+ +LV +G DD A AL+ AA A L+F+A + G V +VR +CGL AA A ++L+LD+PD GAYYV+DA+ VT + +AAF+ A
Sbjct: 173 PPTL---RETLAG---LPPLATKK--GPK--TVEVADVAGP-LLVYFSAHWCPPCRGFTPQLVAFFSELKAA-HPDASIVFVSSDKGEAEFDAYFAEMGDDWYALPYAARDDKAALSKHFDVSGIPSLVLLSAPGADGNRDVVTTSARGLVAEAVV-EGFPESWKPKPYADLSKGVECNGSDVNETRSLVVLADGMDDSAGAVA---ALKEAAAKAEAGRSGDVDA-----LYFFAPKTEGPVAQVRKLCGLPAA-APKEPRLLLLDIPDGGAYYVADAAAVTADAIAAFLAA 443
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: A0A7S0YPF4_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YPF4_9CRYP) HSP 1 Score: 177 bits (450), Expect = 1.510e-47 Identity = 112/277 (40.43%), Postives = 150/277 (54.15%), Query Frame = 3
Query: 81 LVGPKGNTVPISS-LAGKSLALYFSAHWCPPCRMFTPALVKVYEAMRAAGRDDFEFIFLSSDRSEAQFDEYRATMPWLSLPYAKRDEKTALSTRFRVTGIPSLITVAPDGTVVNAGARGAAMEDPTGAAFPWPPQPLSNLEMTTECNGLTINDAPALVAFLEGCDDIEQREAIDGALRPAAEAAXXXXXXXXXXXXXVQLWFYAAGSGG--VVQRVRTMCGLGAASADAGAQMLILDLPDRGAYYVSDASEVTPETLAAFVGAFNDGKRGLTRKQLS 902
LV P G V ++ L GK+ A+YFSAHWC PC+ FTP L YEA++A G DDFE +F+S+DRSE F +Y TMPWL++P+ RD + LS F V GIP+L + PDG V NA A DP A FPW + ++ LE + G +ND P L+ F G D GALR + ++ F A G GG + +VR +C LG G Q+++LD+PD G +YV + VT E + F+ + K L RKQLS
Sbjct: 162 LVKPDGTEVDAAAALGGKTYAVYFSAHWCGPCKGFTPKLAAAYEALKARG-DDFEVVFVSADRSEKAFADYFGTMPWLAVPFDDRDREQELSALFEVEGIPTLCIIGPDGKVSNADGVQAVAGDPECAKFPWGKEDVTALE---DAGGF-LNDTPCLILF--GGDQ--------GALRAPGKEERARASAAGDDGDVEEVAFVAGGDGGGDLAGQVRKLCQLGD-QVGGGGQLVLLDIPDEGGFYVHEGGAVTEEAVRGFLADYRAKK--LARKQLS 420
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Match: A0A7S2FUN0_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2FUN0_9EUKA) HSP 1 Score: 175 bits (444), Expect = 1.090e-46 Identity = 108/281 (38.43%), Postives = 153/281 (54.45%), Query Frame = 3
Query: 66 LGTGDLVGPKGNTVPISSLAGKS--LALYFSAHWCPPCRMFTPALVKVYEAMRAAGRDDFEFIFLSSDRSEAQFDEYRATMPWLSLPYAKRDEKTALSTRFRVTGIPSLITV-APDGTVVNAGARGAAMEDPTGAAFPWPPQPLSNLEMTTECNGLTINDAPALVAFLEGCDDIEQREAIDGALRPAAEAAXXXXXXXXXXXXXVQLWFYAAGSGGVVQRVRTMCGLGAASADAGAQMLILDLPDRGAYYVSDASEVTPETLAAFVGAFNDGKRGLTRKQL 899
LGT L G +G TV I+ + +S + LYFSAHWCPPCR FTP LVK YE A D E IF+SSDR + F EY TMPWL++P + K LS F V+GIPS + + G + AR DP G FPW P+ L+N+ + +N+ A+ L+GC + + A++ L P AEA+ LW YA + G V+++R + L ++ QM++LD+PD G +Y S SE++ ET+ AF+ A+ + L R+QL
Sbjct: 159 LGTEFLSGTEGETVDIAEVKVRSKYIGLYFSAHWCPPCRSFTPTLVKAYEQHLKA--KDLEIIFVSSDRDQKAFSEYFGTMPWLAIPNGDK-RKDQLSKFFEVSGIPSFVLIDVATGATITDNARSNVSSDPEGKDFPWHPKALNNVSSGEGID--KVNEEMAICVLLDGCSETAVKAAVE-VLEPLAEASKAKGDEL--------LWLYAPKTEGPVEQIRKLTKLTSSDKP---QMVLLDIPDEGGFYTSQTSEISAETVTAFLAAYK--AKELERQQL 420 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
BLAST of jgi.p|Trimin1|348056 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_5488 ID=mRNA_5488|Name=jgi.p|Trimin1|348056|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1073bp|location=Sequence derived from alignment at Contig_19:363061..367221- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGGCTTCAGCAAGTGCATCGGCGCGCTCAGCCTCTTGCTGTGCACATCback to top protein sequence of jgi.p|Trimin1|348056 >Trimin1|348056|estExt_Genemark1.C_Ctg_190043 ID=Trimin1|348056|estExt_Genemark1.C_Ctg_190043|Name=jgi.p|Trimin1|348056|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=290bp MGFSKCIGALSLLLCTSSSNAVPHAELKVADEVHSRSGSDVHFKKLAAKGback to top mRNA from alignment at Contig_19:363061..367221- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_5488 ID=mRNA_5488|Name=jgi.p|Trimin1|348056|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4161bp|location=Sequence derived from alignment at Contig_19:363061..367221- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_19:363061..367221- >mRNA_5488 ID=mRNA_5488|Name=jgi.p|Trimin1|348056|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=870bp|location=Sequence derived from alignment at Contig_19:363061..367221- (Tribonema minus UTEX_B_3156 )back to top |