Trimin1|348039|estExt_Genemark1.C_Ctg_180174 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348039
Unique NameTrimin1|348039|estExt_Genemark1.C_Ctg_180174
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length438
Homology
BLAST of jgi.p|Trimin1|348039 vs. uniprot
Match: A0A835Z6T1_9STRA (DNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6T1_9STRA)

HSP 1 Score: 848 bits (2191), Expect = 2.240e-310
Identity = 437/437 (100.00%), Postives = 437/437 (100.00%), Query Frame = 0
Query:    1 MALLMTGVYGRPMHTASFTSPADVAHTLNDMGKSAMTIHQLYTDLYRNSLAQTQYISALQHHIVKLQQERSLLWDAARKKGVHLIDSASLEAIIKRQSEGTDAESDAENPTPASSDVPIKVETSEDAETREKFVAMELRDGSIHVLHAGAGAGKTTLSIRLMKSVAERYPEAECIALTFNVAAAADGEAKRRFANFMAKYKLVIVDEAQDLNLVMIALMTQIYHATTTVYVGDSAQAIYGFMECTDVKHTLQQEYVDWTLYTTFRFGQAVCDFVNVRHLCSSPAVAHPDNTNTRIEIVDNDQVIMDGAHTVLVRKWTEILQTADRYTQAGRSVSIDKDKVTEIINCASSTLPSTWDKSLFKKIDKLKVIAILARVNQEDAADSIVLSTVHGFKGLEADRVLVTRAVRNARNDDEIRLLYVAVTRAKHTLYLQRCRSG 437
            MALLMTGVYGRPMHTASFTSPADVAHTLNDMGKSAMTIHQLYTDLYRNSLAQTQYISALQHHIVKLQQERSLLWDAARKKGVHLIDSASLEAIIKRQSEGTDAESDAENPTPASSDVPIKVETSEDAETREKFVAMELRDGSIHVLHAGAGAGKTTLSIRLMKSVAERYPEAECIALTFNVAAAADGEAKRRFANFMAKYKLVIVDEAQDLNLVMIALMTQIYHATTTVYVGDSAQAIYGFMECTDVKHTLQQEYVDWTLYTTFRFGQAVCDFVNVRHLCSSPAVAHPDNTNTRIEIVDNDQVIMDGAHTVLVRKWTEILQTADRYTQAGRSVSIDKDKVTEIINCASSTLPSTWDKSLFKKIDKLKVIAILARVNQEDAADSIVLSTVHGFKGLEADRVLVTRAVRNARNDDEIRLLYVAVTRAKHTLYLQRCRSG
Sbjct:    1 MALLMTGVYGRPMHTASFTSPADVAHTLNDMGKSAMTIHQLYTDLYRNSLAQTQYISALQHHIVKLQQERSLLWDAARKKGVHLIDSASLEAIIKRQSEGTDAESDAENPTPASSDVPIKVETSEDAETREKFVAMELRDGSIHVLHAGAGAGKTTLSIRLMKSVAERYPEAECIALTFNVAAAADGEAKRRFANFMAKYKLVIVDEAQDLNLVMIALMTQIYHATTTVYVGDSAQAIYGFMECTDVKHTLQQEYVDWTLYTTFRFGQAVCDFVNVRHLCSSPAVAHPDNTNTRIEIVDNDQVIMDGAHTVLVRKWTEILQTADRYTQAGRSVSIDKDKVTEIINCASSTLPSTWDKSLFKKIDKLKVIAILARVNQEDAADSIVLSTVHGFKGLEADRVLVTRAVRNARNDDEIRLLYVAVTRAKHTLYLQRCRSG 437          
BLAST of jgi.p|Trimin1|348039 vs. uniprot
Match: A0A835YZ90_9STRA (UvrD-like helicase ATP-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ90_9STRA)

HSP 1 Score: 593 bits (1529), Expect = 4.870e-211
Identity = 319/376 (84.84%), Postives = 328/376 (87.23%), Query Frame = 0
Query:    1 MALLMTGVYGRPMHTASFTSPADVAHTLNDMGKSAMTIHQLYTDLYRNSLAQTQYISALQHHIVKLQQERSLLWDAARKKGVHLIDSASLEAIIKRQSEGTDAESDAENPTPASSDVPIKVETSEDAETREKFVAMELRDGSIHVLHAGAGAGKTTLSIRLMKSVAERYPEAECIALTFNVAAAADGEAKRRFANFMAKYKLVIVDEAQDLNLVMIALMTQIYHATTTVYVGDSAQAIYGFMECTDVKHTLQQEYVDWTLYTTFRFGQAVCDFVNVRHLCSSPAVAHPDNTNTRIEIVDNDQVIMDGAHTVLVRKWTEILQTADRYTQAGRSVSIDKDKVTEIINCASSTLPSTWDKSLFKKIDKLKVIAILARVN 376
            MALLMTG YGRP+HTA FTSPADVAHTLNDMGKSAMTI QLYTDLYRNSLAQTQYISALQ+HIVKLQ+ERSLLWDAARKKGVHLIDSASL+AI+KRQ E TDAESD ENPTPASS         EDAETREKFVAMELRDGSIHVLHAGAGAGKTTLSIRLMKSVAERYPEAECIALTFNVAAAADGEAKRRFANFMAKYKLVIVDEAQDLNLVMIALMTQIYHATTTVYVGDSAQAIYGFMECTDVKHTLQQ+                           SPAVAHPDNTNTRIEIVDNDQ IMDGAHTVLVRKWTEILQTADRYTQAGRSVSIDKDKVTEIINCASSTL STWD+SLFKKIDKL+V   L+ VN
Sbjct:    1 MALLMTGAYGRPIHTARFTSPADVAHTLNDMGKSAMTIQQLYTDLYRNSLAQTQYISALQYHIVKLQKERSLLWDAARKKGVHLIDSASLDAIVKRQREETDAESDTENPTPASS---------EDAETREKFVAMELRDGSIHVLHAGAGAGKTTLSIRLMKSVAERYPEAECIALTFNVAAAADGEAKRRFANFMAKYKLVIVDEAQDLNLVMIALMTQIYHATTTVYVGDSAQAIYGFMECTDVKHTLQQD---------------------------SPAVAHPDNTNTRIEIVDNDQAIMDGAHTVLVRKWTEILQTADRYTQAGRSVSIDKDKVTEIINCASSTLRSTWDRSLFKKIDKLQVPQWLSAVN 340          
BLAST of jgi.p|Trimin1|348039 vs. uniprot
Match: A0A836CA48_9STRA (DNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA48_9STRA)

HSP 1 Score: 436 bits (1120), Expect = 6.080e-142
Identity = 246/412 (59.71%), Postives = 274/412 (66.50%), Query Frame = 0
Query:  125 EDAETREKFVAMELRDGSIHVLHAGAGAGKTTLSIRLMKSVAERYPEAECIALTFNVAAAADGEAKR---------------------------------------------------------------------------------------------------------RFANFMAKYKLVIVDEAQDLNLVMIALMTQIYHATTTVYVGDSAQAIYGFMECTDVKHTLQQEYVDWTLYTTFRFGQAVCDFVNVRHLCSSPAVAHPDNTNTRIEIVDNDQVIMDGAHTVLVRKWTEILQTADRYTQAGRSVSIDKDKVTEIINCASSTLPSTWDKSLFKKIDKLKVIAILARVNQEDAADSIVLSTVHGFKGLEADRVLVTRAVRNARNDDEIRLLYVAVTRAKHTLYL 431
            EDA+TREKFVAMEL DG+IHVLHAGA AGKTTLSIRLMKSVAER P+ ECIALTFNVAAAADGEAK                                                                                                          RF   MAKYKLVIVDEAQDLNLVMI+LMT IY+ATTTVYVGDSAQAIYGFM+CTDVK+ L+QEYVDWTLYTTFRFGQA+CDFVNVR+LC SPAVAHPDN +T IEIV+ D  I+ GAHTVLVR+WTEIL  ADRYT+AG SV ID++KV EI  CA+S +PSTWDKSLFKK+DKLKV+ IL RVN+ D + SIVLSTVHGFKG E  RVLVTR+VRNARN++E+RLLYVAVTRA+HTLYL
Sbjct:   39 EDAKTREKFVAMELSDGTIHVLHAGADAGKTTLSIRLMKSVAERQPDVECIALTFNVAAAADGEAKVNGAERLTFKTIDSLLYSLYANDVNDATKVDFNVAEEVMDMANLVLRRAVTPEQAMSYADQLETACNSGDPTNLGAVSRILWNAGMKGTWWSHAMLRVRARDDPACRFKKAMAKYKLVIVDEAQDLNLVMISLMTHIYNATTTVYVGDSAQAIYGFMQCTDVKNELKQEYVDWTLYTTFRFGQAICDFVNVRNLCVSPAVAHPDNIDTTIEIVE-DNTILSGAHTVLVRRWTEILDLADRYTEAGHSVFIDREKVDEIKKCATSMMPSTWDKSLFKKVDKLKVLVILDRVNKADHSVSIVLSTVHGFKGRETLRVLVTRSVRNARNEEELRLLYVAVTRARHTLYL 449          
BLAST of jgi.p|Trimin1|348039 vs. uniprot
Match: A0A836C8L3_9STRA (DNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8L3_9STRA)

HSP 1 Score: 334 bits (856), Expect = 2.330e-104
Identity = 196/418 (46.89%), Postives = 231/418 (55.26%), Query Frame = 0
Query:  125 EDAETREKFVAMELRDGSIHVLHAGAGAGKTTLSIRLMKSVAERYPEAECIALTFNVAAAADGEAK---------------------------------------------------------------------------------------------------------RRFANFMAKYKLVIVDEAQDLNLVMIALMTQIYHATTTVYVGDSAQAIYGFMECTDVKHTLQQEYVDWTLYTTFRFGQAVCDFVNVRHLCSSPAVAHPDNTNTRIEIVDNDQVIMDGAHTVLVRKWTEILQTADRYTQAGRSVSIDKDKVTEIINCASSTLPSTWDKSLFKKIDKLKVIAILARVNQEDAADSIVLSTVHGFKGLEADRVLVTRAVRNARNDDEIRLLYVAVTRAKHTLYLQRCRSG 437
            EDA+  E+FVAMEL DG IHVLHAGAGAGKTTL+IRLMKS++ RY   E +ALTFNVAAA D EAK                                                                                                         RR+   M ++KL+IVDEAQDLNLVMI++M QI+HA T VY+GDSAQAIYGFMECTDVKHTLQQ+Y+DWTLYTTFRFGQ VCD+VN R LC SPAVAHP N +T IE++DN + IM G HTVL                                      LPS WDK LFKK+DKLK + IL ++N  DA++SIVLSTVHG+KGLEA+RV+VT +VRNARNDDE++LLYVAVTRA+    L R  +G
Sbjct:   74 EDADNCERFVAMELHDGDIHVLHAGAGAGKTTLAIRLMKSISTRYRAVEAMALTFNVAAAVDSEAKVNGAERLAFKTIDSFLYALYSDEIKGAMKVDFNVTDEVMEMVHCVLKRRVTPEEARSYGDQLETACNRGTCTGLGAVARQVWNEGMKGTWWSHSMLRVRARDDPRRRWVEAMKRFKLIIVDEAQDLNLVMISMMRQIHHAATMVYIGDSAQAIYGFMECTDVKHTLQQQYIDWTLYTTFRFGQKVCDYVNERRLCVSPAVAHPQNFDTTIEVIDNIETIMPGPHTVL--------------------------------------LPSAWDKRLFKKVDKLKALEILGKINLTDASESIVLSTVHGYKGLEAERVVVTCSVRNARNDDELKLLYVAVTRARIAPSLVRAFAG 453          
BLAST of jgi.p|Trimin1|348039 vs. uniprot
Match: A0A835YX22_9STRA (DNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX22_9STRA)

HSP 1 Score: 155 bits (391), Expect = 2.190e-38
Identity = 98/252 (38.89%), Postives = 134/252 (53.17%), Query Frame = 0
Query:  192 RFANFMAKYKLVIVDEAQDLNLVMIALMTQIYHATTTVYVGDSAQAIYGFMECTDVKHTLQQE-YVDWTLYTTFRFGQAVCDFVNVRHLCSSPAVAHPDNTNTRIEIVDNDQVIMDGAHTVLVRKWTEILQTADRYTQAGRSVSIDKDKVTEIINCASST-LPSTWDKSLFKKIDKLKVIAILARVNQ--EDAADSIVLSTVHGFKGLEADRVLVTRAVRNARND---DEIRLLYVAVTRAKHTLYLQRCRS 436
            R+   +A Y  ++VDEAQD+N+VM+ L++++      V+  D+ Q +YGFM C DV   L ++ YV WTLY TFR+G AVCDFVN   LC +P        +T + +       +   H  L   W + LQ ADRY  AGR VS+D  K  E++    S    +T  +  F++I K  V  IL  V    +   D + LSTVHGFKGLEA  V+V   V +A       +    YVAVTR+   LYL   R 
Sbjct:  234 RWQAAVADYDTIVVDEAQDMNVVMLDLISEVKEQHMIVFAMDAGQKLYGFMGCRDVTTLLPRDSYVLWTLYLTFRYGSAVCDFVNALRLCRAPTCPALGAPDTAV-VSTRSATAVQEPHVALFATWADALQAADRYLAAGRRVSMDSAKREEMLTALRSPEANATSCQQAFRRIGKAGVARILHAVGDCGDKVKDDVRLSTVHGFKGLEAGAVVVAANVIDANGSFTSSQKARAYVAVTRSTLRLYLLERRK 484          
BLAST of jgi.p|Trimin1|348039 vs. uniprot
Match: A0A836CDY6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDY6_9STRA)

HSP 1 Score: 124 bits (310), Expect = 6.690e-27
Identity = 72/211 (34.12%), Postives = 113/211 (53.55%), Query Frame = 0
Query:  192 RFANFMAKYKLVIVDEAQDLNLVMIALMTQIYHATTTVYVGDSAQAIYGFMECTDVKHTLQQEYVD-WTLYTTFRFGQAVCDFVNVRHLCSSPAVAHPDNTNTRIEIVDNDQVIMDGAHTVLVRKWTEILQTADRYTQAGRSVSIDKDKVTEIINCASSTLPSTWDKSLFKKIDKLKVIAILARVNQ--EDAADSIVLSTVHGFKGLEADR 399
            R++  +  Y +VI+DEAQDLN+VM  L+ ++      V+VGD  Q +Y FM C DV   L  E  + W LY +FR+G+ VCD +N   L   P  A     +T ++ V +   + +  H  L   W + +  A++Y + GRSVS+D  K  E++  A S       + + K++ +   + IL+ +    EDA D + +STVHG+K    DR
Sbjct:   87 RWSAALQDYDVVIIDEAQDLNVVMAELVMEVAPQKMLVFVGDGGQKLYAFMACRDVTEILPPESFNAWILYMSFRYGKKVCDLINTLQLPLVPTFAAEGAPDTLVQAVGSGLEVAEP-HVSLFATWADAIAAANKYLERGRSVSMDSVKRHELLEAACSEDDDAGYQQVLKRVSRAGALRILSAIRDAGEDAMD-VFISTVHGYKVGNGDR 295          
BLAST of jgi.p|Trimin1|348039 vs. uniprot
Match: A0A835ZHA6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHA6_9STRA)

HSP 1 Score: 122 bits (305), Expect = 8.670e-27
Identity = 69/205 (33.66%), Postives = 111/205 (54.15%), Query Frame = 0
Query:  192 RFANFMAKYKLVIVDEAQDLNLVMIALMTQIYHATTTVYVGDSAQAIYGFMECTDVKHTLQQEYVD-WTLYTTFRFGQAVCDFVNVRHLCSSPAVAHPDNTNTRIEIVDNDQVIMDGAHTVLVRKWTEILQTADRYTQAGRSVSIDKDKVTEIINCASSTLPSTWDKSLFKKIDKLKVIAILARVNQ--EDAADSIVLSTVHGFK 393
            R++  +  Y +VI+DEAQDLN+VM  L+ ++      ++VGD  Q +Y FM C DV   L  E  + W LY +FR+G+ VCD +N   L   P  A     +T ++ V +   + +  H  L   W + +  A++Y + GRSVS+D  K  E++  A S       + + K++ +   + IL+ +    EDA D + +STVHG+K
Sbjct:  229 RWSAALQDYDVVIIDEAQDLNVVMAELVMEVAPQKMLIFVGDGGQKLYAFMACRDVTEILPPESFNAWILYLSFRYGKKVCDLINTLQLPLVPTFAAEGAPDTLVQAVGSGLEVAEP-HVSLFATWADAIAAANKYLERGRSVSMDSVKRHELLEAACSEDDDAGYQQVLKRVSRAGALRILSAIRDAGEDAMD-VFISTVHGYK 431          
BLAST of jgi.p|Trimin1|348039 vs. uniprot
Match: A0A835Z086_9STRA (DNA helicase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z086_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 5.820e-13
Identity = 71/249 (28.51%), Postives = 118/249 (47.39%), Query Frame = 0
Query:  197 MAKYKLVIVDEAQDLNLVMIALMTQIYHATTTVYVGDSAQAIYGFMECTDVKHTLQQEYVD-WTLYTTFRFGQAVCDFVNVRHLCSSPAVAHPDNTNTRIEIVDNDQVIMDGAHTVLVRKWTEILQTADRYTQAGRSVSIDKDKVTEIINCASSTLPST----WDK---------SLFKKIDKLKVIAILARVNQEDAADSIVLSTVHGFKGLEADRVLVTRAVRNARNDDEIRLLYVAVTRAKHTLYL 431
            +A Y+ V++DEAQD+   ++A +++++      YVGD+ QA+Y +    +   +L + + D   L+ ++R GQ VC+ VN     S   V+  D       I          ++T L R    +L+ A   T        +K KV ++++     L S     W K          L K++D+++V     R +Q+     +V STVHGFKG EAD   V R   +   D++ ++  VA TRAK  L +
Sbjct:  205 LANYQCVVIDEAQDIKPAVMAGLSRLHGTKPVFYVGDTDQALYAYDGAVNALSSLSESFTDKLVLHGSYRCGQQVCNLVNENGWASHDMVSLTDRCTV---IAPQLPHAFSASYTYLFRSNMAMLERA-AITPNCYFPDFNK-KVDQLLSSKRQALESALQPDWGKYLTFKRKVTELTKRVDRMRVKR--RRKDQQ----CVVFSTVHGFKGCEAD---VVRLGADIMADEDRKIKLVAATRAKKMLIM 439          
BLAST of jgi.p|Trimin1|348039 vs. uniprot
Match: UPI00200CD8E8 (AAA family ATPase n=1 Tax=Frankia sp. AgB32 TaxID=631119 RepID=UPI00200CD8E8)

HSP 1 Score: 73.6 bits (179), Expect = 2.290e-10
Identity = 84/292 (28.77%), Postives = 120/292 (41.10%), Query Frame = 0
Query:  187 GEAKRRFANFMAKYKLVIVDEAQDLNLVMIALM-TQIYHATTTVYVGDSAQAIYGFMECTDVKHTLQQEYVDWTLYTT--FRFGQAVCDFVNV--------RHLCSSPAVAHPDNTNTRIEIVDNDQVIMDGAHTVLVRKWTEILQTADRYTQAGRSVSIDKDKVTEIINCASSTLPSTWD---------------------------KSLFKKIDKLKVIAILARV-NQEDAADS-IVLSTVHGFKGLEADRVLVTR--AVRNARNDDEIRLLYVAVTRAKHTLYLQRCRS 436
            G+  RR +  M   +++++DEAQD+  VM+ ++ TQ+   T  V VGDSAQAI  F    D    +    VD T Y T  FRFGQ + DF N           L   P    PD+T   I       VI+   + V V +   ++    R    G +  +    V      A+    + W                            K +   ID+    AI+A + N  D  D+ I + T H  KGL+   V +          N+DE+ LLYVAVTRA+  L +  C S
Sbjct:  218 GDLSRRGSYSMGA-EILMIDEAQDMAPVMLGIIKTQMRRGTRVVLVGDSAQAINSFTGAVDAFKNIT---VDNTCYLTRSFRFGQDIADFANTILAQLDTPLRLVGKPG--GPDDTGY-IGPCSRPDVILTRTNAVAVSEALTLMAAGQRVNLVGNTAKM----VVTFAKAAADLRENGWTAHPELGCFSSWKQVQDYAEHDELGGDLKLMVDLIDRFGTDAIIAGLANIADPRDADITVCTAHQSKGLQWQDVKLASDFPAPGKLNEDELMLLYVAVTRAQDVLDVTACPS 498          
BLAST of jgi.p|Trimin1|348039 vs. uniprot
Match: A0A836CK41_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK41_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 5.350e-10
Identity = 37/89 (41.57%), Postives = 54/89 (60.67%), Query Frame = 0
Query:  126 DAETREKFVAMELRDGSIHVLHAGAGAGKTTLSIRLMKSVAERYPEAECIALTFNVAAAADGEAKRRFAN--FMAKYKLVIVDEAQDLN 212
            D++ R  F  ++L++ S+HVLHAGA AGKTTL   L+ S+ ERY     +ALTFNVAAA +G+ +    +  +   Y  +     +DLN
Sbjct:   13 DSQARIDFTNLKLKNRSVHVLHAGAAAGKTTLCTSLLASIGERYEGVRTLALTFNVAAAVEGQDRNECESCTWQTIYSFIFALYKEDLN 101          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348039 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z6T1_9STRA2.240e-310100.00DNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A835YZ90_9STRA4.870e-21184.84UvrD-like helicase ATP-binding domain-containing p... [more]
A0A836CA48_9STRA6.080e-14259.71DNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A836C8L3_9STRA2.330e-10446.89DNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A835YX22_9STRA2.190e-3838.89DNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A836CDY6_9STRA6.690e-2734.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZHA6_9STRA8.670e-2733.66P-loop containing nucleoside triphosphate hydrolas... [more]
A0A835Z086_9STRA5.820e-1328.51DNA helicase n=2 Tax=Tribonema minus TaxID=303371 ... [more]
UPI00200CD8E82.290e-1028.77AAA family ATPase n=1 Tax=Frankia sp. AgB32 TaxID=... [more]
A0A836CK41_9STRA5.350e-1041.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027785UvrD-like helicase C-terminal domainPFAMPF13538UvrD_C_2coord: 384..431
e-value: 2.2E-12
score: 46.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 299..437
e-value: 3.2E-14
score: 55.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 187..256
e-value: 1.4E-10
score: 43.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 139..435
IPR014016UvrD-like helicase, ATP-binding domainPFAMPF00580UvrD-helicasecoord: 194..242
e-value: 1.3E-9
score: 38.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..122
IPR000212DNA helicase, UvrD/REP typePANTHERPTHR11070UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBERcoord: 375..433
coord: 197..377

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_18contigContig_18:1318193..1321634 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348039mRNA_1522Tribonema minus UTEX_B_3156 mRNAContig_18 1318174..1321634 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348039|estExt_Genemark1.C_Ctg_180174 ID=Trimin1|348039|estExt_Genemark1.C_Ctg_180174|Name=jgi.p|Trimin1|348039|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=438bp
MALLMTGVYGRPMHTASFTSPADVAHTLNDMGKSAMTIHQLYTDLYRNSL
AQTQYISALQHHIVKLQQERSLLWDAARKKGVHLIDSASLEAIIKRQSEG
TDAESDAENPTPASSDVPIKVETSEDAETREKFVAMELRDGSIHVLHAGA
GAGKTTLSIRLMKSVAERYPEAECIALTFNVAAAADGEAKRRFANFMAKY
KLVIVDEAQDLNLVMIALMTQIYHATTTVYVGDSAQAIYGFMECTDVKHT
LQQEYVDWTLYTTFRFGQAVCDFVNVRHLCSSPAVAHPDNTNTRIEIVDN
DQVIMDGAHTVLVRKWTEILQTADRYTQAGRSVSIDKDKVTEIINCASST
LPSTWDKSLFKKIDKLKVIAILARVNQEDAADSIVLSTVHGFKGLEADRV
LVTRAVRNARNDDEIRLLYVAVTRAKHTLYLQRCRSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027785UvrD-like_helicase_C
IPR027417P-loop_NTPase
IPR014016UvrD-like_ATP-bd
IPR000212DNA_helicase_UvrD/REP