Trimin1|347994|estExt_Genemark1.C_Ctg_180015 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347994
Unique NameTrimin1|347994|estExt_Genemark1.C_Ctg_180015
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length151
Homology
BLAST of jgi.p|Trimin1|347994 vs. uniprot
Match: A0A836CIZ6_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIZ6_9STRA)

HSP 1 Score: 308 bits (789), Expect = 2.780e-106
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0
Query:    1 MVVPLLCRQGVTDNVTLLDDYLAEVAISEGGEAAPQKKEEILRMVTFLFQSTQADNCADVLDHSRIVECVGRQSRRRIWLVQSSSHKGGASPYVCLGGHYCSCRNFQEVSKKATSLVLCKHLLAIRLAQAFGKLCVNEVDDGQLYAYMRI 150
            MVVPLLCRQGVTDNVTLLDDYLAEVAISEGGEAAPQKKEEILRMVTFLFQSTQADNCADVLDHSRIVECVGRQSRRRIWLVQSSSHKGGASPYVCLGGHYCSCRNFQEVSKKATSLVLCKHLLAIRLAQAFGKLCVNEVDDGQLYAYMRI
Sbjct:    1 MVVPLLCRQGVTDNVTLLDDYLAEVAISEGGEAAPQKKEEILRMVTFLFQSTQADNCADVLDHSRIVECVGRQSRRRIWLVQSSSHKGGASPYVCLGGHYCSCRNFQEVSKKATSLVLCKHLLAIRLAQAFGKLCVNEVDDGQLYAYMRI 150          
BLAST of jgi.p|Trimin1|347994 vs. uniprot
Match: D7G7H1_ECTSI (SWIM-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7H1_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 2.100e-19
Identity = 56/124 (45.16%), Postives = 76/124 (61.29%), Query Frame = 0
Query:   27 ISEGGEA---APQKKEEILRMVTFLFQST--QADNCADVLDHSRIVECVGRQSRRRIWLVQSSSHKGGASPYVCLGGHYCSCRNFQEVSKK-ATSLVLCKHLLAIRLAQAFGKLCVNEVDDGQL 144
            I+ G +A   A   + EIL+++ FLF S     ++   VLD SR+V+ V R + R +WLVQ S      +PY+CL   YCSCR+FQE+ ++ A   VLCKHLLA+RLA A G     EVDD +L
Sbjct:  128 IARGRDATAVAAAAQAEILKVLDFLFCSDCPLVESTIQVLDKSRVVKVVARNTGRSVWLVQGSR----GAPYLCLR-EYCSCRSFQELVRRGAPHPVLCKHLLAVRLAPALGLSMSEEVDDDKL 246          
BLAST of jgi.p|Trimin1|347994 vs. uniprot
Match: C1EB55_MICCC (SWIM-type domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EB55_MICCC)

HSP 1 Score: 68.9 bits (167), Expect = 2.990e-11
Identity = 40/131 (30.53%), Postives = 63/131 (48.09%), Query Frame = 0
Query:   15 VTLLDDYLAEVAISEGGEAAPQKKEEILRMVTFLFQSTQADNCADVLDHSRIVECVGRQSRRRIWLVQSSSHKGGASPYVCLGGHYCSCRNFQ-EVSKKATSLVLCKHLLAIRLAQAFGKLCVNEVDDGQL 144
            + + D    E+  S      P+  +  L ++ F+F +   +N   +     + + V  +S R  W V+  S  G    Y+    HYCSCR FQ +V  K   L+ CKH+LA+R+A+A     V E+DD  L
Sbjct:   78 MAIADAIFDEIRNSGTDVKKPEITDRQLELLAFVFDAKHLENSLVMYQKRAVKKLVAVKSGRSCWQVRGKS--GAKEEYLVFPTHYCSCRAFQWDVLSKGEQLI-CKHMLAVRIAEALDDYNVTEIDDALL 205          
BLAST of jgi.p|Trimin1|347994 vs. uniprot
Match: A0A7S0KE63_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KE63_MICPS)

HSP 1 Score: 67.8 bits (164), Expect = 3.530e-11
Identity = 40/131 (30.53%), Postives = 63/131 (48.09%), Query Frame = 0
Query:   15 VTLLDDYLAEVAISEGGEAAPQKKEEILRMVTFLFQSTQADNCADVLDHSRIVECVGRQSRRRIWLVQSSSHKGGASPYVCLGGHYCSCRNFQ-EVSKKATSLVLCKHLLAIRLAQAFGKLCVNEVDDGQL 144
            + + D    E+  S      P+  +  L ++ F+F +   +N   +     + + V  +S R  W V+  S  G    Y+    HYCSCR FQ +V  K   L+ CKH+LA+R+A+A     V E+DD  L
Sbjct:   40 MAIADAIFDEIRNSGTDVKKPEITDRQLELLAFVFDAKHLENSLVMYQKRAVKKLVAVKSGRACWQVRGKS--GAKEEYLVFPTHYCSCRAFQWDVLSKGEQLI-CKHMLAVRVAEALDDYNVAEIDDALL 167          
BLAST of jgi.p|Trimin1|347994 vs. uniprot
Match: A0A7S3AY48_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AY48_9EUKA)

HSP 1 Score: 66.2 bits (160), Expect = 5.140e-11
Identity = 34/102 (33.33%), Postives = 55/102 (53.92%), Query Frame = 0
Query:   43 RMVTFLFQSTQADN-CADVLDHSRIVECVGRQSRRRIWLVQSSSHKGGASPYVCLGGHYCSCRNFQEVSKKATSLVLCKHLLAIRLAQAFGKLCVNEVDDGQ 143
            R+V   F    A N  A++LDH  I+ C+ R+SRR  + + + + +       C+   +C+C +F         ++LCKH LA+R+A A G L + EVDD +
Sbjct:   23 RVVELQFLCPDAFNGAAEILDHRPIMRCIARESRREFYTIDAKAKRSN-----CMVPGFCTCGSFCFHVAAKPEMLLCKHELAVRIADAVGLLQITEVDDQE 119          
BLAST of jgi.p|Trimin1|347994 vs. uniprot
Match: A0A7S4FBB0_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FBB0_CHRCT)

HSP 1 Score: 57.8 bits (138), Expect = 1.180e-7
Identity = 33/101 (32.67%), Postives = 53/101 (52.48%), Query Frame = 0
Query:   43 RMVTFLFQSTQADNCADVLDHSRIVECVGRQSRRRIWLVQSSSHKGGASPYVCLGGHYCSCRNFQEVSKKATSLVLCKHLLAIRLAQAFGKLCVNEVDDGQ 143
            R++ FL Q       +++LD+ ++       S R  +LV SSS K    P++ + G +CSC  F+        L++CKH LA+ LA+A G     ++DD Q
Sbjct:   37 RLLYFLAQEALI-GASEILDNKQVKRIEATSSGRSFFLVASSSRK----PHLSIPG-FCSCAAFRHKVASRAELLVCKHELAVMLAEALGMSVKEQIDDEQ 131          
BLAST of jgi.p|Trimin1|347994 vs. uniprot
Match: A0A8J2SKC3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKC3_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.790e-7
Identity = 40/144 (27.78%), Postives = 65/144 (45.14%), Query Frame = 0
Query:   13 DNVTLLDDYLAEV--AISEGGEAAPQK-KEEILRMVTFLFQSTQA-----DNCADVLDHSRIVECVGRQSRRRIWLVQSSSHKGGASPYVCLGGHYCSCRNFQEVSKKATSLVLCKHLLAIRLAQAFGKLCVNEVDDGQLYAYM 148
            D +  LDD LA +  +  +  EA   + ++  LR+   L     A     D+  DVL    +     R S R    V ++        Y C    +C+C  F E + + ++ VLCKH+LA RLA    K+   ++ D Q ++Y+
Sbjct:   28 DLLATLDDALAYIHQSFPQDDEAGKVRARDAALRVADDLLGGDPAGRDLMDDAIDVLQTRTLKRVTARPSGRSFVAVDAAFGGTNGGRYACWTD-FCTCEKFGEAAARVSTKVLCKHMLAARLAPLCSKMEAQDISDDQYHSYI 170          
BLAST of jgi.p|Trimin1|347994 vs. uniprot
Match: A0A3S0ZV08_ELYCH (SWIM-type domain-containing protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S0ZV08_ELYCH)

HSP 1 Score: 56.2 bits (134), Expect = 3.670e-7
Identity = 32/110 (29.09%), Postives = 58/110 (52.73%), Query Frame = 0
Query:   36 QKKEEILRMVTFLFQSTQADNCADVLDHSRIVECVGRQSRRRIWLVQSSSHKGGASPYVCLGG-HYCSCRNFQEVSKKATSLVLCKHLLAIRLAQAFGKLCVNEVDDGQL 144
            Q  +++L  ++F FQS+      ++++ S +       SR    ++ +S      +PY C  G  YCSC  +Q    +  + ++CKH+LA+RLA+A  KL   +V D ++
Sbjct:   30 QLSDDLLSTLSFFFQSSLLP-ALELVEKSSVCHVTSPSSRSLYQVIGASG-----TPYTCFPGLKYCSCPAYQFSVLRKDTHMMCKHVLALRLAEAMDKLKPLQVSDSEI 133          
BLAST of jgi.p|Trimin1|347994 vs. uniprot
Match: A0A8J6CDQ7_DIALT (SWIM-type domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDQ7_DIALT)

HSP 1 Score: 55.1 bits (131), Expect = 1.100e-6
Identity = 43/134 (32.09%), Postives = 61/134 (45.52%), Query Frame = 0
Query:    8 RQGVTDNVTLLDDYLAEVAISEGGEAAPQKKEEILRMVTFLFQSTQADNCADVLDHSRIVECVGRQSR-RRIWLVQSSSHKGGASPYVCLGGHYCSCRNFQEVSKKATSLVLCKHLLAIRLAQAFGKLCVNEVD 140
            R+   +  T + D + +V  +          +  LR +  LF  T   +  D+LD + I     R +  R  W VQS+S     S Y C  G YCSC+ F  +    TS  LCKH LA+RLA   G+    E+D
Sbjct:    4 REASAERATAIGDGVLDVLCARARREGTLS-DATLRDLHVLFDKT-LQSAVDLLDFATITRLSPRGAEGRAFWKVQSTS----GSVYHCFSG-YCSCQAFAFLVAH-TSQSLCKHQLAVRLADTTGRFARQELD 129          
BLAST of jgi.p|Trimin1|347994 vs. uniprot
Match: UPI000A2A7909 (zinc finger SWIM domain-containing protein 7 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A7909)

HSP 1 Score: 53.1 bits (126), Expect = 4.860e-6
Identity = 32/111 (28.83%), Postives = 54/111 (48.65%), Query Frame = 0
Query:   39 EEILRMVTFLFQSTQADNCADVLDHSRIVECVGRQSRRRIWLVQSSSHKGGASPYVCL-GGHYCSCRNFQEVSKKATSLVLCKHLLAIRLAQAFGKLCVNEVDDGQLYAYM 148
            +E+L  + F+F  +   +  D+ D   I + V   SR    +V SS        Y CL  G +C+C ++          V+CKHLLA+ +A+A G +   +V +  + AY+
Sbjct:   28 DELLSALHFIFGQSLLHSL-DLXDKHNITKLVSPSSRAIYQVVGSSGQT-----YTCLLNGSFCTCPSYTYTVLVKMDSVMCKHLLAVNMAEALGNVKERQVSNESIVAYL 132          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347994 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A836CIZ6_9STRA2.780e-106100.00SWIM-type domain-containing protein n=1 Tax=Tribon... [more]
D7G7H1_ECTSI2.100e-1945.16SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
C1EB55_MICCC2.990e-1130.53SWIM-type domain-containing protein n=1 Tax=Microm... [more]
A0A7S0KE63_MICPS3.530e-1130.53Hypothetical protein (Fragment) n=2 Tax=Micromonas... [more]
A0A7S3AY48_9EUKA5.140e-1133.33Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S4FBB0_CHRCT1.180e-732.67Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A8J2SKC3_9STRA1.790e-727.78Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A3S0ZV08_ELYCH3.670e-729.09SWIM-type domain-containing protein n=1 Tax=Elysia... [more]
A0A8J6CDQ7_DIALT1.100e-632.09SWIM-type domain-containing protein n=1 Tax=Diacro... [more]
UPI000A2A79094.860e-628.83zinc finger SWIM domain-containing protein 7 n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007527Zinc finger, SWIM-typePFAMPF04434SWIMcoord: 97..125
e-value: 1.5E-4
score: 21.3
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 93..130
score: 9.148886
NoneNo IPR availablePANTHERPTHR28498ZINC FINGER SWIM DOMAIN-CONTAINING PROTEIN 7coord: 35..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_18contigContig_18:136849..138143 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347994mRNA_1252Tribonema minus UTEX_B_3156 mRNAContig_18 136849..138335 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347994|estExt_Genemark1.C_Ctg_180015 ID=Trimin1|347994|estExt_Genemark1.C_Ctg_180015|Name=jgi.p|Trimin1|347994|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=151bp
MVVPLLCRQGVTDNVTLLDDYLAEVAISEGGEAAPQKKEEILRMVTFLFQ
STQADNCADVLDHSRIVECVGRQSRRRIWLVQSSSHKGGASPYVCLGGHY
CSCRNFQEVSKKATSLVLCKHLLAIRLAQAFGKLCVNEVDDGQLYAYMRI
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007527Znf_SWIM