Trimin1|347985|estExt_Genemark1.C_Ctg_170173 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347985
Unique NameTrimin1|347985|estExt_Genemark1.C_Ctg_170173
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length217
Homology
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BLAST of jgi.p|Trimin1|347985 vs. uniprot
Match: A0A835Z7D5_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7D5_9STRA)

HSP 1 Score: 327 bits (837), Expect = 1.910e-111
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0 
Query:    1 MAAVRPLDGPLPPSLFESISRRDESGLRKYIAAGFDCNGSAAMVKALVEAGANPNYGGFNGGDTPLMQAAARGYLDVVRYLVESAGVDINAVNHMXXXXXXXXXXXXXXXXXXXXXDSGADTQIYNDAGKLAGEEFDALFEXXXXXXXXXXXXXXXXXXXXXXAADAKGAADVRALLKDYRVRRGLFVEEEKNPLLWYLEEDELEGDGAQDPNGHQ 216
            MAAVRPLDGPLPPSLFESISRRDESGLRKYIAAGFDCNGSAAMVKALVEAGANPNYGGFNGGDTPLMQAAARGYLDVVRYLVESAGVDINAVNHMXXXXXXXXXXXXXXXXXXXXXDSGADTQIYNDAGKLAGEEFDALFEXXXXXXXXXXXXXXXXXXXXXXAADAKGAADVRALLKDYRVRRGLFVEEEKNPLLWYLEEDELEGDGAQDPNGHQ
Sbjct:    1 MAAVRPLDGPLPPSLFESISRRDESGLRKYIAAGFDCNGSAAMVKALVEAGANPNYGGFNGGDTPLMQAAARGYLDVVRYLVESAGVDINAVNHMXXXXXXXXXXXXXXXXXXXXXDSGADTQIYNDAGKLAGEEFDALFEXXXXXXXXXXXXXXXXXXXXXXAADAKGAADVRALLKDYRVRRGLFVEEEKNPLLWYLEEDELEGDGAQDPNGHQ 216
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BLAST of jgi.p|Trimin1|347985 vs. uniprot
Match: A0A1V9Y3X4_9ACAR (Uncharacterized protein n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9Y3X4_9ACAR)

HSP 1 Score: 51.6 bits (122), Expect = 8.020e-5
Identity = 30/53 (56.60%), Postives = 37/53 (69.81%), Query Frame = 0 
Query:   38 NGSAAMVKALVEAGANPNYGGFNGGDTPLMQAAARGYLDVVRYLVESAGVDIN 90
            +G A MVKAL+EAGA+PN    N G T LM AA  GY+DVVR L+ +  V+IN
Sbjct:    6 HGRADMVKALLEAGADPNTQD-NDGSTALMCAAEHGYIDVVRMLLANPDVEIN 57
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347985 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835Z7D5_9STRA1.910e-111100.00Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
A0A1V9Y3X4_9ACAR8.020e-556.60Uncharacterized protein n=1 Tax=Tropilaelaps merce... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 111..125
score: 36.39
coord: 62..77
score: 40.91
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 95..124
e-value: 0.0064
score: 25.7
coord: 22..56
e-value: 230.0
score: 9.8
coord: 61..91
e-value: 3.8E-4
score: 29.8
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 32..123
e-value: 9.7E-17
score: 61.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 61..94
score: 9.965
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 95..127
score: 10.73959
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 10..196
e-value: 6.2E-28
score: 99.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 32..132
NoneNo IPR availablePANTHERPTHR24126ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATEDcoord: 37..130
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 95..127
score: 9.383383
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 61..83
score: 9.197662

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_17contigContig_17:1308303..1312678 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347985mRNA_3484Tribonema minus UTEX_B_3156 mRNAContig_17 1308303..1312976 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347985|estExt_Genemark1.C_Ctg_170173 ID=Trimin1|347985|estExt_Genemark1.C_Ctg_170173|Name=jgi.p|Trimin1|347985|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=217bp
MAAVRPLDGPLPPSLFESISRRDESGLRKYIAAGFDCNGSAAMVKALVEA
GANPNYGGFNGGDTPLMQAAARGYLDVVRYLVESAGVDINAVNHMGDTAL
AVACFWGQVPTVKYLLDSGADTQIYNDAGKLAGEEFDALFEIYEGASKLA
GEEFDALFERAKGAADAKGAADVRALLKDYRVRRGLFVEEEKNPLLWYLE
EDELEGDGAQDPNGHQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf