Trimin1|347771|estExt_Genemark1.C_Ctg_150168 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347771
Unique NameTrimin1|347771|estExt_Genemark1.C_Ctg_150168
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length290
Homology
BLAST of jgi.p|Trimin1|347771 vs. uniprot
Match: A0A835ZB51_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB51_9STRA)

HSP 1 Score: 546 bits (1406), Expect = 9.890e-196
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0
Query:    1 MAPTDDSRFDPLLGELGGTKGGAAGRGERERDKIKLGDIFRAPWSRKPPPKSQLPRDRMPKDINAALCICGSGLTYDDALQPTELLRARFAAFAYRLPLFIMKTTARGGSEWKGDQGAWVAEILEFCDDYRFLGLDIGPERKAGVNVAYLTFTASLELSERPVRGQVTQVDFTERSRFVKEGARWMYEGGSLLEVSRVNKSTRLDNGSGXXXXXXXXXXXXXGAAAISCVRAAQGVRHMRCSGGGGCLDAAAEAQLLCTPGPSVTVSALVSMLAASDAVDVHQTHAARA 289
            MAPTDDSRFDPLLGELGGTKGGAAGRGERERDKIKLGDIFRAPWSRKPPPKSQLPRDRMPKDINAALCICGSGLTYDDALQPTELLRARFAAFAYRLPLFIMKTTARGGSEWKGDQGAWVAEILEFCDDYRFLGLDIGPERKAGVNVAYLTFTASLELSERPVRGQVTQVDFTERSRFVKEGARWMYEGGSLLEVSRVNKSTRLDNGSGXXXXXXXXXXXXXGAAAISCVRAAQGVRHMRCSGGGGCLDAAAEAQLLCTPGPSVTVSALVSMLAASDAVDVHQTHAARA
Sbjct:    1 MAPTDDSRFDPLLGELGGTKGGAAGRGERERDKIKLGDIFRAPWSRKPPPKSQLPRDRMPKDINAALCICGSGLTYDDALQPTELLRARFAAFAYRLPLFIMKTTARGGSEWKGDQGAWVAEILEFCDDYRFLGLDIGPERKAGVNVAYLTFTASLELSERPVRGQVTQVDFTERSRFVKEGARWMYEGGSLLEVSRVNKSTRLDNGSGXXXXXXXXXXXXXGAAAISCVRAAQGVRHMRCSGGGGCLDAAAEAQLLCTPGPSVTVSALVSMLAASDAVDVHQTHAARA 289          
BLAST of jgi.p|Trimin1|347771 vs. uniprot
Match: A0A7J7IDA3_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IDA3_9RHOD)

HSP 1 Score: 118 bits (296), Expect = 4.580e-29
Identity = 65/150 (43.33%), Postives = 86/150 (57.33%), Query Frame = 0
Query:   57 DRMPKDINAALCICGSGLTYDDALQPT-----------ELLRARFAAFAYRLPLFIMKTTARGGSEWKGDQGAWVAEILEFCDDYRFLGLDIGPERKAGVNVAYLTFTASLELSERPVRGQVTQVDFTERSRFVKEGARWMYEGGSLLEV 195
            DR+P+  +   C CGSG TY     P            ELLRAR++AFAYRLP FIM+TT++   ++  D   W A+ILEFCD YRF G++I  E++A  +V ++ F A+L        G +    F ERSRF KE  RWMY  G L+E 
Sbjct:   37 DRVPQQSDVP-CACGSGRTYQHCCMPVHLGSRVPPEADELLRARYSAFAYRLPAFIMRTTSKTNPDYTDDWNRWEADILEFCDTYRFPGMEILDEKRASPDVCFIQFRANLIYE-----GMLGF--FIERSRFAKERGRWMYASGKLVEA 178          
BLAST of jgi.p|Trimin1|347771 vs. uniprot
Match: M2X0P2_GALSU (SEC-C motif domain protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X0P2_GALSU)

HSP 1 Score: 116 bits (290), Expect = 1.470e-27
Identity = 63/154 (40.91%), Postives = 88/154 (57.14%), Query Frame = 0
Query:   55 PRDRMPKDINAALCICGSGLTYDDALQP-----------TELLRARFAAFAYRLPLFIMKTTARGGSEWKGDQGAWVAEILEFCDDYRFLGLDIGPERKAGVNVAYLTFTASLELSERPVRGQVTQVDFTERSRFVKEGARWMYEGGSLLEVSR 197
            P+ R P +   ALCICG+G  Y    +P            ELLRARF+AFAYRL  +IM TT     +W  D+ AW   ILEFCD Y F+ LDI   + AG ++ Y+ F A+L       +G+   ++F ERS+F+K+  RW Y+ G L+++ R
Sbjct:   93 PKSRAPSED--ALCICGTGRVYKRCCRPFHIGESEPRTALELLRARFSAFAYRLSKYIMGTTHISNEDWTSDRLAWENSILEFCDQYSFISLDILENKVAGPDLTYILFRANLV-----EKGEA--LNFIERSKFIKDRNRWYYQSGRLVDIER 237          
BLAST of jgi.p|Trimin1|347771 vs. uniprot
Match: M1VH01_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VH01_CYAM1)

HSP 1 Score: 114 bits (286), Expect = 5.780e-27
Identity = 65/156 (41.67%), Postives = 91/156 (58.33%), Query Frame = 0
Query:   51 KSQLPRDRMPKDINAALCICGSGLTYDDALQP-----------TELLRARFAAFAYRLPLFIMKTTARGGSEWKGDQGAWVAEILEFCDDYRFLGLDIGPERKAGVNVAYLTFTASLELSERPVRGQVTQVDFTERSRFVKEGARWMYEGGSLLEV 195
            K +   DR+P++     C CGSG TY +   P            ELLRAR++AFAYRLP FIM+TT++   ++  D   W A+ILEFCD YRF G+++  E+ A  +V+++ F A+L + E  +        F ERSRFVKE  +WMY  G L+E 
Sbjct:   88 KKRTRSDRVPQNPEIP-CACGSGRTYRNCCMPFHTNSKAPAEAEELLRARYSAFAYRLPGFIMRTTSKTNPDYTDDWNRWEADILEFCDLYRFPGMEVLDEKTASPDVSFIQFRANL-IYEGALGF------FIERSRFVKERGKWMYASGKLVEA 235          
BLAST of jgi.p|Trimin1|347771 vs. uniprot
Match: A0A835YGG3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGG3_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 4.420e-21
Identity = 63/161 (39.13%), Postives = 83/161 (51.55%), Query Frame = 0
Query:   68 CICGSGLTYDD--------------ALQPTELLRARFAAFAYRLPLFIMKTTARGGSEWKGDQGAWVAEILEFCDDY---------------RFLGLDIGPERK----AGVNVAYLTFTASLELSERPVRGQVTQVDFTERSRFVKEGARWMYEGGSLLEV 195
            C CGS L Y                A  PT+LLRARFAA+A   P F++ +TAR  +EW  D  AW+AE+  +   +               RF+GLD+GPE++    AG   A L FTA+LE  E P  G+  ++ FTERS FV+    W Y GG+LL  
Sbjct:   91 CPCGSALRYGRCCLPLHAGDGAAAAAAGPTQLLRARFAAYAALRPEFVVASTARDSAEWHADTDAWLAELAAYSRRHSAQSTSHCFVRAAPRRFIGLDLGPEKRGVSDAGEATATLIFTATLESLEAP--GE--EIVFTERSFFVQRAGCWYYAGGALLSA 247          
BLAST of jgi.p|Trimin1|347771 vs. uniprot
Match: A0A7S0EAP5_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EAP5_9CRYP)

HSP 1 Score: 96.7 bits (239), Expect = 9.550e-20
Identity = 57/155 (36.77%), Postives = 80/155 (51.61%), Query Frame = 0
Query:   58 RMPKDINAALCICGSGLTYDDALQ-----------PTELLRARFAAFAYRLPLFIMKTTARGGSEWKGDQGAWVAEILEFCDDYRF-------LGLDIGPERKAGVNVAYLTFTASLELSERPVRGQVTQVDFTERSRFVKEGARWMYEGGSLLE 194
            R+P   +  LC CGSG TY    +           P +L+RAR++AFAYRLP FI++TT+R   EW  +Q  W+ E+L+F D Y+F       LG++I     +    AY+ F A +      V      V F ER +  +E   W YE G+LLE
Sbjct:  137 RLPDKADKTLCACGSGRTYYRCCRDHHNCAGAPEDPVDLIRARYSAFAYRLPSFIIRTTSRKSKEWTVNQKKWMKELLDFMDSYKFETSKGEPLGIEIQECIFSDKQNAYIQFQADM------VGEGDRLVSFVERCKLRREDDGWYYERGNLLE 285          
BLAST of jgi.p|Trimin1|347771 vs. uniprot
Match: A0A6T8BXI0_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6T8BXI0_9EUKA)

HSP 1 Score: 92.0 bits (227), Expect = 2.250e-18
Identity = 64/186 (34.41%), Postives = 86/186 (46.24%), Query Frame = 0
Query:   19 TKGGAAGRGERERDKIKLGDIFRAPWSRKPPPKSQLPRDRMPKDINAALCICGSGLTYD------------DALQPTELLRARFAAFAYRLPLFIMKTTARGGSEWKGDQGAWVAEILEFCDDYRFLGLDIGPERKAGVNVAYLTFTASLELSERPVRGQVTQVDFTERSRFVKEGARWMYEGGSL 192
            +KGG   RG+  R + K     +   S  P P   L  DR PK   AA C CGSGL Y             DA  P+ L+RAR+ AF YRLP F+M T    G E++ D G W   +L FCD   F  L +     A  +   + F AS        +G +  +D  E+S FV    +W+Y  G++
Sbjct:   64 SKGGMLPRGKGFRSEQKAASKAKGFGSTGPKPSGGLKYDRRPKA--AAQCACGSGLAYGKCCSPSHEAMGCDAADPSALVRARYTAFRYRLPDFLMATCDPCGDEYQTDHGEWKKSLLHFCDQMDFRKLTVESVDGAA-SPPTVEFRASFVQ-----KGTLNLMDVIEKSEFVHSEGKWLYTRGTV 241          
BLAST of jgi.p|Trimin1|347771 vs. uniprot
Match: L1K0Q6_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1K0Q6_GUITC)

HSP 1 Score: 87.0 bits (214), Expect = 1.380e-16
Identity = 56/159 (35.22%), Postives = 77/159 (48.43%), Query Frame = 0
Query:   56 RDRMPKDINAALCICGSGLTYDDA-----------LQPTELLRARFAAFAYRLPLFIMKTTARGGSEWKGDQGAWVAEILEFCDDYRFLGLDIGPERKAGVNVAYLTFT----ASLELSERPVRGQVTQVDFTERSRFVKEGAR-----WMYEGGSLLE 194
            ++R+P +     C CGSG  Y+             L P EL+RAR++AFAY LP F+M+TTAR   E+  +Q  W  E+++FC  Y F           GVNV    FT    A ++   R +      V+F ERS   +  A+     W Y  GSLLE
Sbjct:   80 QNRVPVNPRTTPCACGSGFMYERCCGRWHSSENPPLDPVELIRARYSAFAYCLPDFLMRTTARKSPEYNTNQAMWRRELIDFCQSYSF---QTNGGEILGVNVEECQFTEKDRAYVQFRARMLGPGSKLVEFWERSVLERSNAKGRQGCWYYLKGSLLE 235          
BLAST of jgi.p|Trimin1|347771 vs. uniprot
Match: A0A7S4NI85_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NI85_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.560e-15
Identity = 57/184 (30.98%), Postives = 95/184 (51.63%), Query Frame = 0
Query:   33 KIKLGDIFRAPWSRKPPPKSQLP---RDRMPK--DINAALCICGSGLTYDDALQP-----------TELLRARFAAFAYRLPLFIMKTTARGGSEWKGDQGAWVAEI--LEFCDDYRFLGLDIGPER--KAGVNVAYLTFTASLELSERPVRGQVT--QVDFTERSRFVKEGAR--WMYEGGSL 192
            K K G   R  +   PP   ++    R R+P   ++ +  C CGSG  Y +  +P           +E+LR R++AFAYRLP +I++TT    ++W+ D+  WV ++      D + F GL++GPE   +   +  ++ F   L +++R V G+    +   +ERSRF+K+G    W Y GG +
Sbjct:   54 KAKRGASTRKGFGAPPPTYDEIVAGLRTRVPPSDEVESQDCQCGSGSKYGECCRPYHIGSVLPSSPSEVLRTRYSAFAYRLPSYIIQTTHPECADWREDKIGWVKDLDRAGMFDSFEFAGLEVGPEEPGEESADEGFVQFRVRL-VTKRSVDGKRAGQETSISERSRFLKDGEPLCWRYAGGEV 236          
BLAST of jgi.p|Trimin1|347771 vs. uniprot
Match: A0A0S4XPI6_9PROT (Uncharacterized protein n=1 Tax=Sulfurovum sp. enrichment culture clone C5 TaxID=497650 RepID=A0A0S4XPI6_9PROT)

HSP 1 Score: 80.1 bits (196), Expect = 4.760e-15
Identity = 51/141 (36.17%), Postives = 73/141 (51.77%), Query Frame = 0
Query:   63 INAALCICGSGLTYDDALQ-------PTE---LLRARFAAFAYRLPLFIMKTTARGGSEWKGDQGAWVAEILEFCDDYRFLGLDIGPERKAGVNVAYLTFTASLELSERPVRGQVTQVDFTERSRFVKEGARWMYEGGSLL 193
            +NA  C+C SG  Y    Q       P+    L+R+R++AFA RL  +I+ +T    S++  D   W   I+EFCD+  F GL+I  E   G N A++TF A L             V F E+SRF+KE  +W+YE G  +
Sbjct:    5 VNAP-CLCFSGKKYKKCCQVYHAGVNPSNAMLLMRSRYSAFALRLVGYIIASTHPNNSDYTKDTKEWEEGIVEFCDNTNFTGLEI-MEFVDGENEAFVTFKAILG-----------DVQFIEKSRFLKENGKWLYESGEFV 132          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347771 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZB51_9STRA9.890e-196100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7J7IDA3_9RHOD4.580e-2943.33Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M2X0P2_GALSU1.470e-2740.91SEC-C motif domain protein n=1 Tax=Galdieria sulph... [more]
M1VH01_CYAM15.780e-2741.67Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A835YGG3_9STRA4.420e-2139.13Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0EAP5_9CRYP9.550e-2036.77Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A6T8BXI0_9EUKA2.250e-1834.41Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
L1K0Q6_GUITC1.380e-1635.22Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
A0A7S4NI85_9STRA1.560e-1530.98Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A0S4XPI6_9PROT4.760e-1536.17Uncharacterized protein n=1 Tax=Sulfurovum sp. enr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF17775UPF0225coord: 82..190
e-value: 6.6E-17
score: 62.1
NoneNo IPR availableGENE3D3.10.450.50coord: 67..193
e-value: 2.5E-14
score: 55.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 79..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_15contigContig_15:1444920..1447842 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347771mRNA_4025Tribonema minus UTEX_B_3156 mRNAContig_15 1444780..1447842 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347771|estExt_Genemark1.C_Ctg_150168 ID=Trimin1|347771|estExt_Genemark1.C_Ctg_150168|Name=jgi.p|Trimin1|347771|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=290bp
MAPTDDSRFDPLLGELGGTKGGAAGRGERERDKIKLGDIFRAPWSRKPPP
KSQLPRDRMPKDINAALCICGSGLTYDDALQPTELLRARFAAFAYRLPLF
IMKTTARGGSEWKGDQGAWVAEILEFCDDYRFLGLDIGPERKAGVNVAYL
TFTASLELSERPVRGQVTQVDFTERSRFVKEGARWMYEGGSLLEVSRVNK
STRLDNGSGGGGGSSGGEWCCSGAAAISCVRAAQGVRHMRCSGGGGCLDA
AAEAQLLCTPGPSVTVSALVSMLAASDAVDVHQTHAARA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032710NTF2-like_dom_sf