Trimin1|347756|estExt_Genemark1.C_Ctg_150143 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347756
Unique NameTrimin1|347756|estExt_Genemark1.C_Ctg_150143
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length854
Homology
BLAST of jgi.p|Trimin1|347756 vs. uniprot
Match: A0A835Z8V5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8V5_9STRA)

HSP 1 Score: 1218 bits (3152), Expect = 0.000e+0
Identity = 853/853 (100.00%), Postives = 853/853 (100.00%), Query Frame = 0
Query:    1 MHQAQQQQVGGGEAPEAVMAQPQQQAEGLQAFWNPSARLSPSTSADDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWVGYASEQQAXXXXXXXXXXLQHNLYLQYHQPQQMPPPPMGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPAKIGGMISHRGGNGKGRMASASPGTVFSRFGNRKVDNGGGGGAGYEHRAITASVSADSLHAGMAGLSLGGGSGLAAGYAPPPIYAQHSFPGTFGAPLAPPPQPQPPSTAHLGSAAPSTTTSSSIIGVGGIPLTFSAEAMSRVLIPNAKIGAVIGKGGAIVKHIRECSGARVTISDAGDDAGWAGGGGPGGGERLLHIIGSFFAVVTAFGAILAHAETPSNGDPLPGLAALVASGMLSGEATSAAALEAALPLPPSGFRMLISSAKAGALIGRAGATIKAIRDASGARIDISSHLAGGLPVPPGXXXXXXXXXXXXXXTPAAIAIALSMDRVVAVSGPFTACVRAHHLIVASRMEPTVLQMXXXXXXXXXPPIPLSLSMPAMSGSNVTSSPTTSGNTTPGYLMSRVGTGSFDGFGNPHVIAHSSSSFEYMDGGGXAAPLPAGAYYALPXGGSQQVEELSNLRGGAPKAEAKAPGXXXXXXXXXXXXXXXXXXXQGXXXXXXXXXXXXXXXXXXXXXXXSMRLTVEGXXXXXXXXXXXXXXSHTQARQQRSGITTVCTAQYGCSAXXXXXXGEAGDSRGKVPSGELSDQELERNIADIMHLSGALLEAVDAHGGGSGSNAQLMDPAAPADEQPQDRGQEKGSGGXXXXXXRGGAPLQLSITGTAESVQLAEYLVQTRLARSAAXXXXXXXQPALSPALH 853
            MHQAQQQQVGGGEAPEAVMAQPQQQAEGLQAFWNPSARLSPSTSADDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWVGYASEQQAXXXXXXXXXXLQHNLYLQYHQPQQMPPPPMGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPAKIGGMISHRGGNGKGRMASASPGTVFSRFGNRKVDNGGGGGAGYEHRAITASVSADSLHAGMAGLSLGGGSGLAAGYAPPPIYAQHSFPGTFGAPLAPPPQPQPPSTAHLGSAAPSTTTSSSIIGVGGIPLTFSAEAMSRVLIPNAKIGAVIGKGGAIVKHIRECSGARVTISDAGDDAGWAGGGGPGGGERLLHIIGSFFAVVTAFGAILAHAETPSNGDPLPGLAALVASGMLSGEATSAAALEAALPLPPSGFRMLISSAKAGALIGRAGATIKAIRDASGARIDISSHLAGGLPVPPGXXXXXXXXXXXXXXTPAAIAIALSMDRVVAVSGPFTACVRAHHLIVASRMEPTVLQMXXXXXXXXXPPIPLSLSMPAMSGSNVTSSPTTSGNTTPGYLMSRVGTGSFDGFGNPHVIAHSSSSFEYMDGGGXAAPLPAGAYYALPXGGSQQVEELSNLRGGAPKAEAKAPGXXXXXXXXXXXXXXXXXXXQGXXXXXXXXXXXXXXXXXXXXXXXSMRLTVEGXXXXXXXXXXXXXXSHTQARQQRSGITTVCTAQYGCSAXXXXXXGEAGDSRGKVPSGELSDQELERNIADIMHLSGALLEAVDAHGGGSGSNAQLMDPAAPADEQPQDRGQEKGSGGXXXXXXRGGAPLQLSITGTAESVQLAEYLVQTRLARSAAXXXXXXXQPALSPALH
Sbjct:    1 MHQAQQQQVGGGEAPEAVMAQPQQQAEGLQAFWNPSARLSPSTSADDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWVGYASEQQAXXXXXXXXXXLQHNLYLQYHQPQQMPPPPMGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPAKIGGMISHRGGNGKGRMASASPGTVFSRFGNRKVDNGGGGGAGYEHRAITASVSADSLHAGMAGLSLGGGSGLAAGYAPPPIYAQHSFPGTFGAPLAPPPQPQPPSTAHLGSAAPSTTTSSSIIGVGGIPLTFSAEAMSRVLIPNAKIGAVIGKGGAIVKHIRECSGARVTISDAGDDAGWAGGGGPGGGERLLHIIGSFFAVVTAFGAILAHAETPSNGDPLPGLAALVASGMLSGEATSAAALEAALPLPPSGFRMLISSAKAGALIGRAGATIKAIRDASGARIDISSHLAGGLPVPPGXXXXXXXXXXXXXXTPAAIAIALSMDRVVAVSGPFTACVRAHHLIVASRMEPTVLQMXXXXXXXXXPPIPLSLSMPAMSGSNVTSSPTTSGNTTPGYLMSRVGTGSFDGFGNPHVIAHSSSSFEYMDGGGXAAPLPAGAYYALPXGGSQQVEELSNLRGGAPKAEAKAPGXXXXXXXXXXXXXXXXXXXQGXXXXXXXXXXXXXXXXXXXXXXXSMRLTVEGXXXXXXXXXXXXXXSHTQARQQRSGITTVCTAQYGCSAXXXXXXGEAGDSRGKVPSGELSDQELERNIADIMHLSGALLEAVDAHGGGSGSNAQLMDPAAPADEQPQDRGQEKGSGGXXXXXXRGGAPLQLSITGTAESVQLAEYLVQTRLARSAAXXXXXXXQPALSPALH 853          
BLAST of jgi.p|Trimin1|347756 vs. uniprot
Match: A0A836CIH4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH4_9STRA)

HSP 1 Score: 313 bits (803), Expect = 2.380e-93
Identity = 175/226 (77.43%), Postives = 192/226 (84.96%), Query Frame = 0
Query:  291 SAEAMSRVLIPNAKIGAVIGKGGAIVKHIRECSGARVTISDAGDDAGWAGGGGPGGGERLLHIIGSFFAVVTAFGAILAHAETPSNGDPLPGLAALVASGMLSGEATSAAALEAALPLPPSGFRMLISSAKAGALIGRAGATIKAIRDASGARIDISSHLAGGLPVPPGXXXXXXXXXXXXXXTPAAIAIALSMDRVVAVSGPFTACVRAHHLIVASRMEPTVLQM 516
            S+EA+SRVLIPNAKIGAVIGKGGAIVKHIRECSGARVTISDAGDDAGWAGGGGPGGGERL+H++GSF AVV A GAILAHAETPSNG+PLPGLA LVA G+LSGEA  AAA++AA+ +PPS FRMLI +AKAGALIGR G TIKAIRDASGARI+ISSHLAG LP PPG              TPAAIA+ALS DRVV+VSGPF ACVRAHHLIVAS M+  V+ M
Sbjct:  103 SSEAVSRVLIPNAKIGAVIGKGGAIVKHIRECSGARVTISDAGDDAGWAGGGGPGGGERLVHLVGSFGAVVAALGAILAHAETPSNGEPLPGLAQLVAGGLLSGEA--AAAVDAAITVPPSAFRMLIPNAKAGALIGRGGTTIKAIRDASGARIEISSHLAGNLPAPPGGAGAAGPP------TPAAIAVALSADRVVSVSGPFAACVRAHHLIVASMMDQGVMAM 320          
BLAST of jgi.p|Trimin1|347756 vs. uniprot
Match: D8LKQ4_ECTSI (Poly(Rc) binding protien (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ4_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 4.820e-24
Identity = 84/178 (47.19%), Postives = 103/178 (57.87%), Query Frame = 0
Query:  293 EAMSRVLIPNAKIGAVIGKGGAIVKHIRECSGARVTISDA-----GDDAGWAGGGGPGGGERLLHIIGSFFAVVTAFGAILAHAETPS-NGDPLPGLAALVASGMLSGEATSAAALEAALPLPPSGFRMLISSAKAGALIGRAGATIKAIRDASGARIDISSH------LAGGLPVPP 458
            E +SRVLIPN KIGAVIGKGGAI+KHIRE SGA+VTISD+     GD             +R++   G+F +V  AF  IL+HA     + DP+ GLA         G+    A          + FR+LI + KAG LIGR G TIKAIR+ SGARI+ISSH      + G LP PP
Sbjct:  100 ETVSRVLIPNCKIGAVIGKGGAIIKHIREVSGAKVTISDSCTGLHGDSD-----------DRMVTAAGTFNSVQLAFTHILSHAGAVGPDADPVMGLAG--------GDPDCVA----------NSFRLLIPNVKAGGLIGRGGCTIKAIREQSGARIEISSHAFHFHPVHGPLPAPP 248          
BLAST of jgi.p|Trimin1|347756 vs. uniprot
Match: A0A8J2T296_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T296_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 8.530e-9
Identity = 51/154 (33.12%), Postives = 73/154 (47.40%), Query Frame = 0
Query:  297 RVLIPNAKIGAVIGKGGAIVKHIRECSGARVTISDAGDDAGWAGGGGPGGGERLLHIIGSFFAVVTAFGAILAHAETPSNGDPLPGLAALVASGMLSGEATSAAALEAALPLPPSGFR--MLISSAKAGALIGRAGATIKAIRDASGARIDISS 448
            ++L+P+A  G VIGKGGA+V HIR+ SG +V + ++      AGG   GG ER++ + G F +V  AF  +L H       DPL                            PP      +L+   K G LIGR GA+I  +R  SGA + + +
Sbjct:  102 KLLLPHAACGIVIGKGGAMVSHIRDASGCQVDVQESPAPPPMAGGV-QGGSERIITLSGDFGSVYAAFQMVLQHLAAAQPADPL------------------------LTTRPPGSVEAVVLVPRNKTGGLIGRGGASINRVRQDSGATVKVGA 230          
BLAST of jgi.p|Trimin1|347756 vs. uniprot
Match: A0A7I8WC18_9ANNE (DgyrCDS13925 n=2 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8WC18_9ANNE)

HSP 1 Score: 67.0 bits (162), Expect = 7.850e-8
Identity = 50/154 (32.47%), Postives = 77/154 (50.00%), Query Frame = 0
Query:  297 RVLIPNAKIGAVIGKGGAIVKHIRECSGARVTISDAGDDAGWAGGGGPGGGERLLHIIGSFFAVVTAFGAILAHAETPSNGDPLPGLAALVASGMLSGEATSAAALEAALPLPPSGFRMLISSAKAGALIGRAGATIKAIRDASGARIDISSHL 450
            R+++   ++G++IGK G  VK  RE SGA++ ISDA               ER++ + GS   +  AF  I    E   N                      A   ++ALP PP   R+++ +++ G+LIG+AGA IK IRDA+GA I ++S +
Sbjct:  114 RMVMQGKEVGSIIGKKGDNVKKYREESGAKINISDASCP------------ERIVTVSGSSEGIYKAFTMICKKFEEDIN----------------------AQHGQSALPKPPVTIRLVVPASQCGSLIGKAGAKIKEIRDATGASIQVASEM 233          
BLAST of jgi.p|Trimin1|347756 vs. uniprot
Match: A0A7I8WC90_9ANNE (DgyrCDS13927 n=2 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8WC90_9ANNE)

HSP 1 Score: 67.0 bits (162), Expect = 8.330e-8
Identity = 50/154 (32.47%), Postives = 77/154 (50.00%), Query Frame = 0
Query:  297 RVLIPNAKIGAVIGKGGAIVKHIRECSGARVTISDAGDDAGWAGGGGPGGGERLLHIIGSFFAVVTAFGAILAHAETPSNGDPLPGLAALVASGMLSGEATSAAALEAALPLPPSGFRMLISSAKAGALIGRAGATIKAIRDASGARIDISSHL 450
            R+++   ++G++IGK G  VK  RE SGA++ ISDA               ER++ + GS   +  AF  I    E   N                      A   ++ALP PP   R+++ +++ G+LIG+AGA IK IRDA+GA I ++S +
Sbjct:   49 RMVMQGKEVGSIIGKKGDNVKKYREESGAKINISDASCP------------ERIVTVSGSSEGIYKAFTMICKKFEEDIN----------------------AQHGQSALPKPPVTIRLVVPASQCGSLIGKAGAKIKEIRDATGASIQVASEM 168          
BLAST of jgi.p|Trimin1|347756 vs. uniprot
Match: A0A0C9TXC3_SPHS4 (Unplaced genomic scaffold SPHSTscaffold_294, whole genome shotgun sequence n=1 Tax=Sphaerobolus stellatus (strain SS14) TaxID=990650 RepID=A0A0C9TXC3_SPHS4)

HSP 1 Score: 65.5 bits (158), Expect = 2.380e-7
Identity = 61/190 (32.11%), Postives = 90/190 (47.37%), Query Frame = 0
Query:  266 HLGSAAPSTTTSSSIIGVG-GIPLTFSAEAMSRVLIPNAKIGAVIGKGGAIVKHIRECSGARVTISDAGDDAGWAGGGGPGGGERLLHIIGSFFAVVTAFGAILAHA-ETPSNGDPLPGLAALVASGMLSGEATSAAALEAALPLPPSGFRMLISSAKAGALIGRAGATIKAIRDASGARIDISSHLAGG 453
             L S   ST+ + S I  G G P + SA+   R LI       +IGK GA V  IR+ SGARV +S++           PG  ER+L++ G   AV  AFG I+    + P +   +PG  A+                           + +I +++ G++IG+ GA IK I+DASGAR++ S  +  G
Sbjct:  106 QLSSKVSSTSGNGSNIAAGSGSPNSSSAQIHMRCLIVTQDASIIIGKAGAHVNEIRQKSGARVMVSESI----------PGNPERILNVSGPLDAVSKAFGLIVRRINDEPFDVPSVPGSRAVT-------------------------IKFMIPNSRMGSVIGKGGAKIKEIQDASGARLNASEGMLPG 260          
BLAST of jgi.p|Trimin1|347756 vs. uniprot
Match: A0A4D9CYY6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYY6_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 2.780e-7
Identity = 67/225 (29.78%), Postives = 97/225 (43.11%), Query Frame = 0
Query:  283 VGGIPLTFSAEAMSRVLIPNAKIGAVIGKGGAIVKHIRECSGARVTISDAGDDAGWAGGGGPGGGERLLHIIGSFFAVVTAFGAILAHA---ETPSNGDPLPGLAALVASGMLSGEATSAAALEAALPLPPSGFRMLISSAKAGALIGRAGATIKAIRDASGARIDISSHLAGGLPVPPGXXXXXXXXXXXXXXTPAAIAIALSMDRVVAVSGPFTACVRAHHLI 504
            +  + L+   E  + +L+P ++IG VIG+GG ++K IRE +G R+ IS A +D             RL+ + GS   V +A   I   A   E+   G+               GE             PP G R++I S+ AG +IG+ GATI  IR  S ARI + S                           +A   ALSM+RV+ + G   AC  AH +I
Sbjct:   90 LANLSLSSGLETTTCLLLPASRIGGVIGRGGDVIKGIRELTGTRIHISPAAEDDRDPA-------FRLVTVSGSVQEVCSAVELISRQAGLFESQQGGED--------------GE-----------DYPPPGLRLVIDSSHAGQVIGKKGATINEIRTQSQARIQVLSD------------------------EESAEEGALSMERVILLIGEAEACRLAHKMI 258          
BLAST of jgi.p|Trimin1|347756 vs. uniprot
Match: W7TTG5_9STRA (Poly-binding protein 3 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTG5_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 3.740e-7
Identity = 67/225 (29.78%), Postives = 97/225 (43.11%), Query Frame = 0
Query:  283 VGGIPLTFSAEAMSRVLIPNAKIGAVIGKGGAIVKHIRECSGARVTISDAGDDAGWAGGGGPGGGERLLHIIGSFFAVVTAFGAILAHA---ETPSNGDPLPGLAALVASGMLSGEATSAAALEAALPLPPSGFRMLISSAKAGALIGRAGATIKAIRDASGARIDISSHLAGGLPVPPGXXXXXXXXXXXXXXTPAAIAIALSMDRVVAVSGPFTACVRAHHLI 504
            +  + L+   E  + +L+P ++IG VIG+GG ++K IRE +G R+ IS A +D             RL+ + GS   V +A   I   A   E+   G+               GE             PP G R++I S+ AG +IG+ GATI  IR  S ARI + S                           +A   ALSM+RV+ + G   AC  AH +I
Sbjct:  193 LANLSLSSGLETTTCLLLPASRIGGVIGRGGDVIKGIRELTGTRIHISPAAEDDRDPA-------FRLVTVSGSVQEVCSAVELISRQAGLFESQQGGED--------------GE-----------DYPPPGLRLVIDSSHAGQVIGKKGATINEIRTQSQARIQVLSD------------------------EESAEEGALSMERVILLIGEAEACRLAHKMI 361          
BLAST of jgi.p|Trimin1|347756 vs. uniprot
Match: A0A427XWN8_9TREE (Uncharacterized protein n=1 Tax=Apiotrichum porosum TaxID=105984 RepID=A0A427XWN8_9TREE)

HSP 1 Score: 63.2 bits (152), Expect = 1.090e-6
Identity = 51/152 (33.55%), Postives = 74/152 (48.68%), Query Frame = 0
Query:  297 RVLIPNAKIGAVIGKGGAIVKHIRECSGARVTISDAGDDAGWAGGGGPGGGERLLHIIGSFFAVVTAFGAILAHA-ETPSNGDPLPGLAALVASGMLSGEATSAAALEAALPLPPSGFRMLISSAKAGALIGRAGATIKAIRDASGARIDIS 447
            R LI       +IG+ GA V  IR+ SGARVTIS++           PG  ER+L++ G   AV  AFG I+    + P +   +PG  A+                           + +I +++ G++IGR GA IK I+DASGAR++ S
Sbjct:   96 RALIVTQDASVIIGRSGAHVNEIRDKSGARVTISESI----------PGNPERILNVFGPLDAVSKAFGLIVRRINDEPFDVASVPGSRAVT-------------------------IKFIIPNSRMGSVIGRGGAKIKEIQDASGARLNAS 212          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347756 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z8V5_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CIH4_9STRA2.380e-9377.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LKQ4_ECTSI4.820e-2447.19Poly(Rc) binding protien (Partial) (Fragment) n=1 ... [more]
A0A8J2T296_9STRA8.530e-933.12Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7I8WC18_9ANNE7.850e-832.47DgyrCDS13925 n=2 Tax=Dimorphilus gyrociliatus TaxI... [more]
A0A7I8WC90_9ANNE8.330e-832.47DgyrCDS13927 n=2 Tax=Dimorphilus gyrociliatus TaxI... [more]
A0A0C9TXC3_SPHS42.380e-732.11Unplaced genomic scaffold SPHSTscaffold_294, whole... [more]
A0A4D9CYY6_9STRA2.780e-729.78Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TTG5_9STRA3.740e-729.78Poly-binding protein 3 n=1 Tax=Nannochloropsis gad... [more]
A0A427XWN8_9TREE1.090e-633.55Uncharacterized protein n=1 Tax=Apiotrichum porosu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 292..372
e-value: 1.3E-10
score: 51.2
coord: 409..509
e-value: 8.0E-10
score: 48.6
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 412..510
e-value: 2.4E-14
score: 54.7
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 290..374
e-value: 3.2E-15
score: 57.6
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 411..523
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 287..374
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 414..505
e-value: 5.2E-9
score: 35.8
coord: 297..367
e-value: 6.1E-12
score: 45.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..145
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 764..815
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..156
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 835..853
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 834..853
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..47
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 296..837
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 410..504
score: 11.321798
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 293..367
score: 14.61302
NoneNo IPR availableCDDcd02396PCBP_like_KHcoord: 413..505
e-value: 2.10495E-13
score: 63.6495
NoneNo IPR availableCDDcd02396PCBP_like_KHcoord: 297..368
e-value: 8.65701E-14
score: 64.8051

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_15contigContig_15:1219924..1226056 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347756mRNA_3994Tribonema minus UTEX_B_3156 mRNAContig_15 1219924..1226056 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347756|estExt_Genemark1.C_Ctg_150143 ID=Trimin1|347756|estExt_Genemark1.C_Ctg_150143|Name=jgi.p|Trimin1|347756|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=854bp
MHQAQQQQVGGGEAPEAVMAQPQQQAEGLQAFWNPSARLSPSTSADDASG
GGHRLPPHHLQQQQQQQQQQRHHHQPHQQQQQQWVGYASEQQAQQHQAQQ
HHQLQHNLYLQYHQPQQMPPPPMGPPLQQQQPQQQPGGPLLRPHQQKQEQ
QHRGWPAKIGGMISHRGGNGKGRMASASPGTVFSRFGNRKVDNGGGGGAG
YEHRAITASVSADSLHAGMAGLSLGGGSGLAAGYAPPPIYAQHSFPGTFG
APLAPPPQPQPPSTAHLGSAAPSTTTSSSIIGVGGIPLTFSAEAMSRVLI
PNAKIGAVIGKGGAIVKHIRECSGARVTISDAGDDAGWAGGGGPGGGERL
LHIIGSFFAVVTAFGAILAHAETPSNGDPLPGLAALVASGMLSGEATSAA
ALEAALPLPPSGFRMLISSAKAGALIGRAGATIKAIRDASGARIDISSHL
AGGLPVPPGGAPPGGGGGGGAPPTPAAIAIALSMDRVVAVSGPFTACVRA
HHLIVASRMEPTVLQMMEPNMLQVHPPIPLSLSMPAMSGSNVTSSPTTSG
NTTPGYLMSRVGTGSFDGFGNPHVIAHSSSSFEYMDGGGGAAPLPAGAYY
ALPPGGSQQVEELSNLRGGAPKAEAKAPGGGLYMGGGSSSGGGGAAAAQG
KGEAAGAAGGGGGGDGDGDGGGASMRLTVEGGSTLAAAAAAAAVLSHTQA
RQQRSGITTVCTAQYGCSAAAAAGGGEAGDSRGKVPSGELSDQELERNIA
DIMHLSGALLEAVDAHGGGSGSNAQLMDPAAPADEQPQDRGQEKGSGGSG
GGGSRGGAPLQLSITGTAESVQLAEYLVQTRLARSAAAAAQQQQQPALSP
ALH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR036612KH_dom_type_1_sf
IPR004088KH_dom_type_1