Trimin1|347744|estExt_Genemark1.C_Ctg_150118 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347744
Unique NameTrimin1|347744|estExt_Genemark1.C_Ctg_150118
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length524
Homology
BLAST of jgi.p|Trimin1|347744 vs. uniprot
Match: A0A836CJQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJQ1_9STRA)

HSP 1 Score: 843 bits (2179), Expect = 1.190e-305
Identity = 523/523 (100.00%), Postives = 523/523 (100.00%), Query Frame = 0
Query:    1 MLVLVFTGCLKRVSQVCTIAXXXXXXXKTRKADPKKTWHPLHDFLHTMLNTFATGVLGPLFVGEIPLILTNDLNFTLLAIXXXXXXXXXXXXXXXXXWMIFYRRVNRNCGTCDQLQAARAHGVDSRRGFPVCPGTEFDKTMVKFASRLGVYQVLVFFSTLSRANNVCVFTDKAYKRLLNHPGAGVYYPIPLLGPIIVGTIRGAGGNVFPPDKGLGALASAFPFNAQIALICSAVWHLAVNDTHIAGGRVRAALARAAGGGGAVTPTALRCAIVALFLVMNVIQYLARXXXXXXXXXXXXXXXXXXXXXXXXXXSFPRFSTFNPFTPIWEVVYLVSGIPRAPIKPGKGKAKSKTSKLVKSLLSAARGLGVMGLAAFAVWSYVPRSTLRSGEFLKQGEFLGWCTLLPELRGCQPTIAVVEATGRLAVYRGKSPGAKSNTLLWSSAAADEPPAAATSKDGWVAALAADGTLTLKDGAAAEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVLISVKAWSSAPSQ 523
            MLVLVFTGCLKRVSQVCTIAXXXXXXXKTRKADPKKTWHPLHDFLHTMLNTFATGVLGPLFVGEIPLILTNDLNFTLLAIXXXXXXXXXXXXXXXXXWMIFYRRVNRNCGTCDQLQAARAHGVDSRRGFPVCPGTEFDKTMVKFASRLGVYQVLVFFSTLSRANNVCVFTDKAYKRLLNHPGAGVYYPIPLLGPIIVGTIRGAGGNVFPPDKGLGALASAFPFNAQIALICSAVWHLAVNDTHIAGGRVRAALARAAGGGGAVTPTALRCAIVALFLVMNVIQYLARXXXXXXXXXXXXXXXXXXXXXXXXXXSFPRFSTFNPFTPIWEVVYLVSGIPRAPIKPGKGKAKSKTSKLVKSLLSAARGLGVMGLAAFAVWSYVPRSTLRSGEFLKQGEFLGWCTLLPELRGCQPTIAVVEATGRLAVYRGKSPGAKSNTLLWSSAAADEPPAAATSKDGWVAALAADGTLTLKDGAAAEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVLISVKAWSSAPSQ
Sbjct:    1 MLVLVFTGCLKRVSQVCTIAXXXXXXXKTRKADPKKTWHPLHDFLHTMLNTFATGVLGPLFVGEIPLILTNDLNFTLLAIXXXXXXXXXXXXXXXXXWMIFYRRVNRNCGTCDQLQAARAHGVDSRRGFPVCPGTEFDKTMVKFASRLGVYQVLVFFSTLSRANNVCVFTDKAYKRLLNHPGAGVYYPIPLLGPIIVGTIRGAGGNVFPPDKGLGALASAFPFNAQIALICSAVWHLAVNDTHIAGGRVRAALARAAGGGGAVTPTALRCAIVALFLVMNVIQYLARXXXXXXXXXXXXXXXXXXXXXXXXXXSFPRFSTFNPFTPIWEVVYLVSGIPRAPIKPGKGKAKSKTSKLVKSLLSAARGLGVMGLAAFAVWSYVPRSTLRSGEFLKQGEFLGWCTLLPELRGCQPTIAVVEATGRLAVYRGKSPGAKSNTLLWSSAAADEPPAAATSKDGWVAALAADGTLTLKDGAAAEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVLISVKAWSSAPSQ 523          
BLAST of jgi.p|Trimin1|347744 vs. uniprot
Match: A0A835Z9Q9_9STRA (Bulb-type lectin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q9_9STRA)

HSP 1 Score: 132 bits (332), Expect = 4.010e-32
Identity = 71/169 (42.01%), Postives = 106/169 (62.72%), Query Frame = 0
Query:  314 SFPRFSTFNPFTPIWEVVYLVSGIPR----APIKPGKGKAKSKTSKLVKSLLSAARGLGVMGLAAFAVWSYVPRSTLRSGEFLKQGEFLGWCTLLPELRGCQPTIAVVEATGRLAVYRGKSPGAKSNTLLWSSAAADEPPAAATSKDGWVAALAADGTLTLKDGAAAEE 478
            SF  +ST NPF+P+WE++Y+ +G+ R    AP +  KG       +  +      +G  ++G+    V+ ++P  TL +G+ L+QG+++G CTL P LR C PT+AVVE  GR+AVY+GK P  ++  LLW+SA  ++P   A S DGWVA +  DGTL L+DGA A +
Sbjct:    6 SFKTYSTVNPFSPLWELLYMATGVQRSPGAAPPRSFKGLYDLHLRRKTELAFDLTKGAFIIGVMTAVVYQWLPNDTLHAGQVLRQGDYIGACTLAPSLRKCTPTVAVVEP-GRVAVYKGKHPMDEAKELLWASAKKEQP---AKSADGWVAVVREDGTLALQDGADARK 170          
BLAST of jgi.p|Trimin1|347744 vs. uniprot
Match: A0A6H5JUV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV5_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 4.210e-26
Identity = 121/424 (28.54%), Postives = 169/424 (39.86%), Query Frame = 0
Query:   44 FLHTMLNTFATGVLGPLFVGEIPLILTNDLNFTLLAIXXXXXXXXXXXXXXXXXWMIFYRRVNRNCGTCDQLQAARAHGVDSRRGFPVCPGTEFDKTMVKFASRLGVYQVLVFFSTLSRANNVCVFTDKAYKRLLNHPGAGVYYPIPLLGPIIVGTIRGAGGNVFPPDKGLGALASAFPFNAQIALICSAVWHLAVNDTHIAGGRVRAALARAAGGGGAVTPTALRCAIVALFLVMNVIQ-YLARXXXXXXXXXXXXXXXXXXXXXXXXXXSFPRFSTFNPFTPIWEVVYLVSGIPRAPIKPGKGKAKS--------KTSKLVKSLLSAARGLGVMGLAAFAVWSYVPRSTLRSGEFLKQG-EFLGWCTLLPEL--RGCQPTIAVVEATGRLAVYRGKS----PGAKSNT-------LLWSSAA 444
            F+HT++ T  +GV+GPL + + PL L NDL  T +                    M+F+                                  FD  +V F     +++ +   ST SR N +C   D A  +    P    YYPI L GPI++G  RG GG++ P DKGL +++   P+  Q+    +  +H+  NDT+I GG VR AL     G    T   +R   V   +V+ VIQ Y A                                    P T   +     +G   A    GK K +         KT K ++S L A + +GV  +A  A++S  P ST+  G  +K G   L  C  LP++   GC P  A V  TG L VYRGK     P AK          +LWSS A
Sbjct:   51 FVHTLMCTTGSGVVGPLLMRDPPLFLNNDLLVTCI--------------------MVFF-----------------------------LVSVVFDPYVVNFIKTPHLWKAMALLSTTSRMNKICFIVDYALTKFPPSP----YYPIALFGPIMIGLARGIGGSLVPADKGLSSISKDLPWAVQLCFSVATFYHIVANDTYILGGMVRGAL-----GLENATREDIRLIAVTFGVVVTVIQTYYAPKFNPFTPAHQATSPALYAVTGMPKTAITIEVPRSTPSTDADKAKD--NGGNGAEETKGKEKKEGEGEGLYDLKTRKKIQSFLEALKPVGVAAVAVLALYSRQPPSTIIPGVVVKAGGSGLASCAFLPKVLSNGCTPLRAAVTETGSLVVYRGKEVPVLPAAKKKVEGDDGAEVLWSSPA 414          
BLAST of jgi.p|Trimin1|347744 vs. uniprot
Match: A0A4D9CX56_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CX56_9STRA)

HSP 1 Score: 100 bits (248), Expect = 7.220e-19
Identity = 118/479 (24.63%), Postives = 184/479 (38.41%), Query Frame = 0
Query:   15 QVCTIAXXXXXXXKTRKADPKKTWHPLHDFLHTMLNTFATGVLGPLFVGEIPLILTNDLNFTLLAIXXXXXXXXXXXXXXXXXWMIFYRRVNRNCGTCDQLQAARAHGVDSRRGFPVCPGTEFDKTMVKF--ASRLGVYQVLVFFSTLSRANNVCVFTDKAYKRLLNHPGAGVYYPIPLLGPIIVGTIRGAGGNVFPPDKGLGALASAFPFNAQIALICSAVWHLAVNDTHIAGGRVRAALARAAGGGGAVTPTALRCAIVALFLVMNVIQYLARXXXXXXXXXXXXXXXXXXXXXXXXXXSFPRFSTFNPFTPIWEVVYLVSGIPRAPIKPGKGKAKSKTS-----------KLVKSLLSAARGL-GVMGLAAFAVWSYV-PRSTLRSGEFLKQGEFLGWCTLLPELRG-CQPTIAVVEATGRLAVYRGKSPGAKSNTLLWSSAAADEPPAAATSKDGWVAALAADGTLTLKDGAAAE 477
            +VC  A       + R   P   +  LH  +   L  FA G + P+F G  P++  NDL   L+ +                 +++ Y RV                            G     +  KF   +   +Y+      T+ +A      TD A          G YYPI ++GP++VGT+ G+ G   PPD+G+  LA+  P N Q  L+    +HLA +D  + G  +R   A          P  L+   V  F+ M  +                               S  +   +NPFTP+  ++Y V GIP +P    + K+  + S           K    LL A++ L  ++ + A+ +   + PR+TL  G  L  GE++  C  L    G C+     ++A GRL++YRG SP    +  LW S A     +   ++ G  A L   G L LK  A  +
Sbjct:   31 EVCLFAFCLGASMRVR---PSAQYSWLHHLVLVFLTGFAGGTIIPMFFGRTPVLFVNDLLVPLVCLSW---------------YLVHYTRV----------------------------GGLLQTSPCKFLLVALFEIYRAASILKTVGQAA-----TDIA---------PGPYYPIAVVGPVLVGTLSGSMGAFMPPDRGISFLATGVPLNLQTTLLACLFYHLAAHDPALPGAYLRGLPALRLS-----DPENLKALTVFFFVAMAFL-------------------------------SLVKGPDYNPFTPVHTLLYQVLGIPYSPATLERLKSTRRASTAGDHGPKPAVKASGRLLGASKVLVPLLAVLAYQLQGKLAPRTTLPVGGRLNPGEYIAACGPLQSFTGHCKQHFLTLDAEGRLSLYRGASPKDTGSQRLWQSKATRR--SGKLNEAGLFAELKEGGVLVLKHTAGGD 411          
BLAST of jgi.p|Trimin1|347744 vs. uniprot
Match: A0A7R9U3G1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3G1_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 1.000e-6
Identity = 58/214 (27.10%), Postives = 85/214 (39.72%), Query Frame = 0
Query:   30 RKADPKKTWHPLHDFLHTMLNTFATGVLGPLFVGEIPLILTNDLNF--TLLAIXXXXXXXXXXXXXXXXXWMIFYRRVNRNCGTCDQLQAARAHGVDSRRGFPVCPGTEFDKTMVKFASRLGVYQVLVFFSTLSRANNVCVFTDKAYKRLLNHPGAGVYYPIPLLGPIIVGTIRGAGGNVFPPDKGLGALASAFPFNAQIALICSAVWHLAVND 241
            R A   K+   +   + T L  F  G L PL +G+ P+ L +D+ F  TLLA                  W + +                           PV    E+++ + +    LG Y        + +A   C   + A K L     A   YPIPL+GPI++G +   GG   P DKGL A++       +I L CSA +H+ VND
Sbjct:   49 RAAAKAKSGSWVESLIRTFLTAFGGGTLVPLILGKPPVFLDSDVLFCMTLLA------------------WALTHLT-------------------------PVGRWVEYNQAL-RLPLNLGGY--------IFKAVKCCSTVNTAAKVL----SASALYPIPLMGPIVLGVLGSTGGMFLPFDKGLAAVSKGLSVAFEIPLACSAFFHIIVND 206          
BLAST of jgi.p|Trimin1|347744 vs. uniprot
Match: D7G2H0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2H0_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 5.330e-6
Identity = 62/191 (32.46%), Postives = 85/191 (44.50%), Query Frame = 0
Query:  152 QVLVFFSTLSRANNVC---VFTDKAYKRLLNHPGAGVYYPIPLLGPIIVGTIRGAGGNVFPPDKGLGALASAFPFNAQIALICSAVWHLAVNDTHIAGGRVRAALARAAGGGGAVTPTALRCAIVALFL-VMNVIQYLARXXXXXXXXXXXXXXXXXXXXXXXXXXSFPRFSTFNPFTPIWEVVYLVSGIP 338
            QV++  S + RAN++C   V ++   K        G +YPI L GPI++GT+ G GG   P DKGL  L +  P+  Q A   S  ++L V D ++ G  +R A A    G   V   A    IVA FL V+ + Q L                                   FNPFTP+  VVY V+G+P
Sbjct:  135 QVILVLSEVFRANSMCGIVVLSNSILK-------PGKHYPIALWGPILLGTVGGCGGLFLPLDKGLKGLKNGAPWPLQSAFYGSMFFNLFVYDPNV-GPYLRDAAALFLDGDLVVQGRA----IVAGFLCVVALAQTLISP-------------------------------AFNPFTPVHNVVYTVTGVP 282          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347744 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A836CJQ1_9STRA1.190e-305100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z9Q9_9STRA4.010e-3242.01Bulb-type lectin domain-containing protein n=1 Tax... [more]
A0A6H5JUV5_9PHAE4.210e-2628.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9CX56_9STRA7.220e-1924.63Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7R9U3G1_9STRA1.000e-627.10Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
D7G2H0_ECTSI5.330e-632.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_15contigContig_15:1032673..1041401 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347744mRNA_3972Tribonema minus UTEX_B_3156 mRNAContig_15 1032359..1041401 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347744|estExt_Genemark1.C_Ctg_150118 ID=Trimin1|347744|estExt_Genemark1.C_Ctg_150118|Name=jgi.p|Trimin1|347744|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=524bp
MLVLVFTGCLKRVSQVCTIALVFTGCLKTRKADPKKTWHPLHDFLHTMLN
TFATGVLGPLFVGEIPLILTNDLNFTLLAIIPLILTNDLDFTLLGVVWMI
FYRRVNRNCGTCDQLQAARAHGVDSRRGFPVCPGTEFDKTMVKFASRLGV
YQVLVFFSTLSRANNVCVFTDKAYKRLLNHPGAGVYYPIPLLGPIIVGTI
RGAGGNVFPPDKGLGALASAFPFNAQIALICSAVWHLAVNDTHIAGGRVR
AALARAAGGGGAVTPTALRCAIVALFLVMNVIQYLARGGGGAVTRTALRC
AIVALFLVMNVIQSFPRFSTFNPFTPIWEVVYLVSGIPRAPIKPGKGKAK
SKTSKLVKSLLSAARGLGVMGLAAFAVWSYVPRSTLRSGEFLKQGEFLGW
CTLLPELRGCQPTIAVVEATGRLAVYRGKSPGAKSNTLLWSSAAADEPPA
AATSKDGWVAALAADGTLTLKDGAAAEEARWRSAPADAAPLSAWGADAAR
AAVGPDGVSVLISVKAWSSAPSQ*
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