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Homology
BLAST of jgi.p|Trimin1|347744 vs. uniprot
Match: A0A836CJQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJQ1_9STRA) HSP 1 Score: 843 bits (2179), Expect = 6.680e-304 Identity = 523/523 (100.00%), Postives = 523/523 (100.00%), Query Frame = 1
Query: 1 MLVLVFTGCLKRVSQVCTIAXXXXXXXKTRKADPKKTWHPLHDFLHTMLNTFATGVLGPLFVGEIPLILTNDLNFTLLAIXXXXXXXXXXXXXXXXXWMIFYRRVNRNCGTCDQLQAARAHGVDSRRGFPVCPGTEFDKTMVKFASRLGVYQVLVFFSTLSRANNVCVFTDKAYKRLLNHPGAGVYYPIPLLGPIIVGTIRGAGGNVFPPDKGLGALASAFPFNAQIALICSAVWHLAVNDTHIAGGRVRAALARAAGGGGAVTPTALRCAIVALFLVMNVIQYLARXXXXXXXXXXXXXXXXXXXXXXXXXXSFPRFSTFNPFTPIWEVVYLVSGIPRAPIKPGKGKAKSKTSKLVKSLLSAARGLGVMGLAAFAVWSYVPRSTLRSGEFLKQGEFLGWCTLLPELRGCQPTIAVVEATGRLAVYRGKSPGAKSNTLLWSSAAADEPPAAATSKDGWVAALAADGTLTLKDGAAAEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVLISVKAWSSAPSQ 1569
MLVLVFTGCLKRVSQVCTIAXXXXXXXKTRKADPKKTWHPLHDFLHTMLNTFATGVLGPLFVGEIPLILTNDLNFTLLAIXXXXXXXXXXXXXXXXXWMIFYRRVNRNCGTCDQLQAARAHGVDSRRGFPVCPGTEFDKTMVKFASRLGVYQVLVFFSTLSRANNVCVFTDKAYKRLLNHPGAGVYYPIPLLGPIIVGTIRGAGGNVFPPDKGLGALASAFPFNAQIALICSAVWHLAVNDTHIAGGRVRAALARAAGGGGAVTPTALRCAIVALFLVMNVIQYLARXXXXXXXXXXXXXXXXXXXXXXXXXXSFPRFSTFNPFTPIWEVVYLVSGIPRAPIKPGKGKAKSKTSKLVKSLLSAARGLGVMGLAAFAVWSYVPRSTLRSGEFLKQGEFLGWCTLLPELRGCQPTIAVVEATGRLAVYRGKSPGAKSNTLLWSSAAADEPPAAATSKDGWVAALAADGTLTLKDGAAAEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVLISVKAWSSAPSQ
Sbjct: 1 MLVLVFTGCLKRVSQVCTIAXXXXXXXKTRKADPKKTWHPLHDFLHTMLNTFATGVLGPLFVGEIPLILTNDLNFTLLAIXXXXXXXXXXXXXXXXXWMIFYRRVNRNCGTCDQLQAARAHGVDSRRGFPVCPGTEFDKTMVKFASRLGVYQVLVFFSTLSRANNVCVFTDKAYKRLLNHPGAGVYYPIPLLGPIIVGTIRGAGGNVFPPDKGLGALASAFPFNAQIALICSAVWHLAVNDTHIAGGRVRAALARAAGGGGAVTPTALRCAIVALFLVMNVIQYLARXXXXXXXXXXXXXXXXXXXXXXXXXXSFPRFSTFNPFTPIWEVVYLVSGIPRAPIKPGKGKAKSKTSKLVKSLLSAARGLGVMGLAAFAVWSYVPRSTLRSGEFLKQGEFLGWCTLLPELRGCQPTIAVVEATGRLAVYRGKSPGAKSNTLLWSSAAADEPPAAATSKDGWVAALAADGTLTLKDGAAAEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVLISVKAWSSAPSQ 523
BLAST of jgi.p|Trimin1|347744 vs. uniprot
Match: A0A835Z9Q9_9STRA (Bulb-type lectin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q9_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.020e-31 Identity = 71/169 (42.01%), Postives = 106/169 (62.72%), Query Frame = 1
Query: 940 SFPRFSTFNPFTPIWEVVYLVSGIPR----APIKPGKGKAKSKTSKLVKSLLSAARGLGVMGLAAFAVWSYVPRSTLRSGEFLKQGEFLGWCTLLPELRGCQPTIAVVEATGRLAVYRGKSPGAKSNTLLWSSAAADEPPAAATSKDGWVAALAADGTLTLKDGAAAEE 1434
SF +ST NPF+P+WE++Y+ +G+ R AP + KG + + +G ++G+ V+ ++P TL +G+ L+QG+++G CTL P LR C PT+AVVE GR+AVY+GK P ++ LLW+SA ++P A S DGWVA + DGTL L+DGA A +
Sbjct: 6 SFKTYSTVNPFSPLWELLYMATGVQRSPGAAPPRSFKGLYDLHLRRKTELAFDLTKGAFIIGVMTAVVYQWLPNDTLHAGQVLRQGDYIGACTLAPSLRKCTPTVAVVEP-GRVAVYKGKHPMDEAKELLWASAKKEQP---AKSADGWVAVVREDGTLALQDGADARK 170
BLAST of jgi.p|Trimin1|347744 vs. uniprot
Match: A0A6H5JUV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV5_9PHAE) HSP 1 Score: 120 bits (302), Expect = 8.930e-26 Identity = 121/424 (28.54%), Postives = 169/424 (39.86%), Query Frame = 1
Query: 130 FLHTMLNTFATGVLGPLFVGEIPLILTNDLNFTLLAIXXXXXXXXXXXXXXXXXWMIFYRRVNRNCGTCDQLQAARAHGVDSRRGFPVCPGTEFDKTMVKFASRLGVYQVLVFFSTLSRANNVCVFTDKAYKRLLNHPGAGVYYPIPLLGPIIVGTIRGAGGNVFPPDKGLGALASAFPFNAQIALICSAVWHLAVNDTHIAGGRVRAALARAAGGGGAVTPTALRCAIVALFLVMNVIQ-YLARXXXXXXXXXXXXXXXXXXXXXXXXXXSFPRFSTFNPFTPIWEVVYLVSGIPRAPIKPGKGKAKS--------KTSKLVKSLLSAARGLGVMGLAAFAVWSYVPRSTLRSGEFLKQG-EFLGWCTLLPEL--RGCQPTIAVVEATGRLAVYRGKS----PGAKSNT-------LLWSSAA 1332
F+HT++ T +GV+GPL + + PL L NDL T + M+F+ FD +V F +++ + ST SR N +C D A + P YYPI L GPI++G RG GG++ P DKGL +++ P+ Q+ + +H+ NDT+I GG VR AL G T +R V +V+ VIQ Y A P T + +G A GK K + KT K ++S L A + +GV +A A++S P ST+ G +K G L C LP++ GC P A V TG L VYRGK P AK +LWSS A
Sbjct: 51 FVHTLMCTTGSGVVGPLLMRDPPLFLNNDLLVTCI--------------------MVFF-----------------------------LVSVVFDPYVVNFIKTPHLWKAMALLSTTSRMNKICFIVDYALTKFPPSP----YYPIALFGPIMIGLARGIGGSLVPADKGLSSISKDLPWAVQLCFSVATFYHIVANDTYILGGMVRGAL-----GLENATREDIRLIAVTFGVVVTVIQTYYAPKFNPFTPAHQATSPALYAVTGMPKTAITIEVPRSTPSTDADKAKD--NGGNGAEETKGKEKKEGEGEGLYDLKTRKKIQSFLEALKPVGVAAVAVLALYSRQPPSTIIPGVVVKAGGSGLASCAFLPKVLSNGCTPLRAAVTETGSLVVYRGKEVPVLPAAKKKVEGDDGAEVLWSSPA 414
BLAST of jgi.p|Trimin1|347744 vs. uniprot
Match: A0A4D9CX56_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CX56_9STRA) HSP 1 Score: 100 bits (248), Expect = 1.180e-18 Identity = 118/479 (24.63%), Postives = 184/479 (38.41%), Query Frame = 1
Query: 43 QVCTIAXXXXXXXKTRKADPKKTWHPLHDFLHTMLNTFATGVLGPLFVGEIPLILTNDLNFTLLAIXXXXXXXXXXXXXXXXXWMIFYRRVNRNCGTCDQLQAARAHGVDSRRGFPVCPGTEFDKTMVKF--ASRLGVYQVLVFFSTLSRANNVCVFTDKAYKRLLNHPGAGVYYPIPLLGPIIVGTIRGAGGNVFPPDKGLGALASAFPFNAQIALICSAVWHLAVNDTHIAGGRVRAALARAAGGGGAVTPTALRCAIVALFLVMNVIQYLARXXXXXXXXXXXXXXXXXXXXXXXXXXSFPRFSTFNPFTPIWEVVYLVSGIPRAPIKPGKGKAKSKTS-----------KLVKSLLSAARGL-GVMGLAAFAVWSYV-PRSTLRSGEFLKQGEFLGWCTLLPELRG-CQPTIAVVEATGRLAVYRGKSPGAKSNTLLWSSAAADEPPAAATSKDGWVAALAADGTLTLKDGAAAE 1431
+VC A + R P + LH + L FA G + P+F G P++ NDL L+ + +++ Y RV G + KF + +Y+ T+ +A TD A G YYPI ++GP++VGT+ G+ G PPD+G+ LA+ P N Q L+ +HLA +D + G +R A P L+ V F+ M + S + +NPFTP+ ++Y V GIP +P + K+ + S K LL A++ L ++ + A+ + + PR+TL G L GE++ C L G C+ ++A GRL++YRG SP + LW S A + ++ G A L G L LK A +
Sbjct: 31 EVCLFAFCLGASMRVR---PSAQYSWLHHLVLVFLTGFAGGTIIPMFFGRTPVLFVNDLLVPLVCLSW---------------YLVHYTRV----------------------------GGLLQTSPCKFLLVALFEIYRAASILKTVGQAA-----TDIA---------PGPYYPIAVVGPVLVGTLSGSMGAFMPPDRGISFLATGVPLNLQTTLLACLFYHLAAHDPALPGAYLRGLPALRLS-----DPENLKALTVFFFVAMAFL-------------------------------SLVKGPDYNPFTPVHTLLYQVLGIPYSPATLERLKSTRRASTAGDHGPKPAVKASGRLLGASKVLVPLLAVLAYQLQGKLAPRTTLPVGGRLNPGEYIAACGPLQSFTGHCKQHFLTLDAEGRLSLYRGASPKDTGSQRLWQSKATRR--SGKLNEAGLFAELKEGGVLVLKHTAGGD 411
BLAST of jgi.p|Trimin1|347744 vs. uniprot
Match: A0A7R9U3G1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3G1_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 1.310e-6 Identity = 58/214 (27.10%), Postives = 85/214 (39.72%), Query Frame = 1
Query: 88 RKADPKKTWHPLHDFLHTMLNTFATGVLGPLFVGEIPLILTNDLNF--TLLAIXXXXXXXXXXXXXXXXXWMIFYRRVNRNCGTCDQLQAARAHGVDSRRGFPVCPGTEFDKTMVKFASRLGVYQVLVFFSTLSRANNVCVFTDKAYKRLLNHPGAGVYYPIPLLGPIIVGTIRGAGGNVFPPDKGLGALASAFPFNAQIALICSAVWHLAVND 723
R A K+ + + T L F G L PL +G+ P+ L +D+ F TLLA W + + PV E+++ + + LG Y + +A C + A K L A YPIPL+GPI++G + GG P DKGL A++ +I L CSA +H+ VND
Sbjct: 49 RAAAKAKSGSWVESLIRTFLTAFGGGTLVPLILGKPPVFLDSDVLFCMTLLA------------------WALTHLT-------------------------PVGRWVEYNQAL-RLPLNLGGY--------IFKAVKCCSTVNTAAKVL----SASALYPIPLMGPIVLGVLGSTGGMFLPFDKGLAAVSKGLSVAFEIPLACSAFFHIIVND 206
BLAST of jgi.p|Trimin1|347744 vs. uniprot
Match: D7G2H0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2H0_ECTSI) HSP 1 Score: 59.3 bits (142), Expect = 6.940e-6 Identity = 62/191 (32.46%), Postives = 85/191 (44.50%), Query Frame = 1
Query: 454 QVLVFFSTLSRANNVC---VFTDKAYKRLLNHPGAGVYYPIPLLGPIIVGTIRGAGGNVFPPDKGLGALASAFPFNAQIALICSAVWHLAVNDTHIAGGRVRAALARAAGGGGAVTPTALRCAIVALFL-VMNVIQYLARXXXXXXXXXXXXXXXXXXXXXXXXXXSFPRFSTFNPFTPIWEVVYLVSGIP 1014
QV++ S + RAN++C V ++ K G +YPI L GPI++GT+ G GG P DKGL L + P+ Q A S ++L V D ++ G +R A A G V A IVA FL V+ + Q L FNPFTP+ VVY V+G+P
Sbjct: 135 QVILVLSEVFRANSMCGIVVLSNSILK-------PGKHYPIALWGPILLGTVGGCGGLFLPLDKGLKGLKNGAPWPLQSAFYGSMFFNLFVYDPNV-GPYLRDAAALFLDGDLVVQGRA----IVAGFLCVVALAQTLISP-------------------------------AFNPFTPVHNVVYTVTGVP 282
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | Trimin1|347744|estExt_Genemark1.C_Ctg_150118 |
| Max annot lvl | 2759|Eukaryota |
| EggNOG OGs | 2BW3U@1|root,2SEWS@2759|Eukaryota |
| Evalue | 8.74e-07 |
| Seed ortholog | 2880.D7G2H0 |
| Hectar predicted targeting category | other localisation |
| TranscriptId | 348066 |
| Track | FilteredModels1 |
| ProteinId | 347744 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_3972 ID=mRNA_3972|Name=jgi.p|Trimin1|347744|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1886bp|location=Sequence derived from alignment at Contig_15:1032359..1041401- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.
ATGCTTGTGCTCGTCTTCACGGGCTGCCTCAAGCGCGTGTCTCAGGTGTG
CACGATCGCGCTCGTCTTCACGGGCTGCCTCAAGACGCGCAAGGCGGACC
CGAAGAAGACGTGGCACCCGCTGCACGACTTCCTGCACACGATGCTCAAC
ACGTTCGCCACGGGCGTGCTCGGGCCGCTCTTTGTGGGCGAGATACCGCT
CATACTCACCAACGACCTCAACTTCACGCTGCTCGCGATCATACCGCTCA
TACTCACCAATGACCTTGACTTCACGCTGCTGGGCGTCGTCTGGATGATC
TTCTACAGGCGCGTCAACCGCAACTGCGGCACATGCGACCAACTGCAGGC
TGCAAGGGCGCACGGTGTTGACAGCCGCCGTGGCTTTCCCGTGTGCCCCG
GCACGGAGTTTGACAAGACCATGGTGAAGTTTGCCAGCCGCCTCGGGGTG
TACCAGGTTCTGGTCTTCTTCTCCACGCTATCGCGCGCCAACAACGTGTG
CGTATTTACCGACAAGGCCTACAAGCGCCTCCTCAACCACCCCGGCGCCG
GCGTCTACTACCCCATCCCCCTGCTCGGGCCCATCATTGTCGGCACGATC
CGCGGCGCCGGCGGCAACGTCTTCCCTCCCGACAAGGGCCTCGGCGCACT
CGCGTCGGCGTTCCCCTTCAACGCGCAAATCGCGCTCATCTGTAGCGCGG
TGTGGCACCTGGCGGTGAACGACACGCACATCGCGGGGGGGCGCGTGCGC
GCGGCGCTGGCGCGCGCGGCGGGCGGCGGCGGCGCCGTCACGCCGACGGC
GCTGCGCTGCGCGATCGTCGCGCTGTTCCTGGTGATGAACGTCATCCAGT
ATTTGGCTAGGGGCGGTGGCGGCGCCGTCACACGGACGGCGCTGCGCTGC
GCGATCGTCGCGCTGTTCCTGGTGATGAATGTCATCCAGTCCTTCCCGAG
GTTCTCGACCTTCAACCCATTCACGCCAATCTGGGAGGTGGTGTACCTCG
TGTCGGGGATACCGCGCGCGCCGATCAAGCCCGGCAAGGGCAAGGCCAAG
AGCAAGACCAGCAAACTGGTCAAGTCGCTGCTGAGCGCGGCGCGGGGGCT
GGGCGTCATGGGCCTGGCCGCCTTTGCCGTGTGGTCCTACGTGCCGCGGA
GCACGCTGAGGTCGGGGGAGTTTCTCAAGCAGGGGGAGTTCCTGGGGTGG
TGCACGCTGCTGCCGGAGCTCAGGGGGTGCCAGCCGACCATCGCGGTCGT
GGAGGCGACGGGGCGGCTCGCGGTGTACAGGGGCAAGAGCCCCGGCGCCA
AGTCCAACACGCTGCTGTGGTCAAGCGCGGCCGCCGACGAGCCGCCCGCG
GCAGCAACCAGCAAAGACGGCTGGGTCGCCGCGCTCGCCGCCGACGGCAC
TCTCACACTCAAAGACGGCGCCGCCGCGGAGGAAGCGCGCTGGCGCTCCG
CGCCGGCTGACGCAGCGCCGCTCAGCGCGTGGGGCGCAGACGCCGCGCGC
GCCGCCGTGGGCCCCGACGGCGTGAGCGTCCTCATCTCGGTGAAGGCGTG
GTCGTCGGCGCCGTCGCAGTGAGCGCTGCTGCTTCCGCCGCCGCCGCCGC
CGCTGCTGCTGCTGCCGCCGCCGCCGCCGCCGCTGCGCATGGGTAGGCGG
CGGCAGCAATGACAGCGGCGTCACGTGCATGCTGTAAATGCGCTGCAGCG
CCGCGGTCGCTTATAGGCGCGAGTGTACGCGCCAAGCACTGGTCGCAGTG
GTGATGAGCAGCGACGGCAGTTACAGCTGCGCGCAGCAGCGTCTGGGCGC
TGCCGTCGCTCGGCGCAGCCCTCGCGTCATCGTCCCGGCAGCGCGCAGTT
CTGCGGGCGCCGTGGTCGCGGTGGCAGGAATTAAAC back to topprotein sequence of jgi.p|Trimin1|347744 >Trimin1|347744|estExt_Genemark1.C_Ctg_150118 ID=Trimin1|347744|estExt_Genemark1.C_Ctg_150118|Name=jgi.p|Trimin1|347744|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=524bp
MLVLVFTGCLKRVSQVCTIALVFTGCLKTRKADPKKTWHPLHDFLHTMLN
TFATGVLGPLFVGEIPLILTNDLNFTLLAIIPLILTNDLDFTLLGVVWMI
FYRRVNRNCGTCDQLQAARAHGVDSRRGFPVCPGTEFDKTMVKFASRLGV
YQVLVFFSTLSRANNVCVFTDKAYKRLLNHPGAGVYYPIPLLGPIIVGTI
RGAGGNVFPPDKGLGALASAFPFNAQIALICSAVWHLAVNDTHIAGGRVR
AALARAAGGGGAVTPTALRCAIVALFLVMNVIQYLARGGGGAVTRTALRC
AIVALFLVMNVIQSFPRFSTFNPFTPIWEVVYLVSGIPRAPIKPGKGKAK
SKTSKLVKSLLSAARGLGVMGLAAFAVWSYVPRSTLRSGEFLKQGEFLGW
CTLLPELRGCQPTIAVVEATGRLAVYRGKSPGAKSNTLLWSSAAADEPPA
AATSKDGWVAALAADGTLTLKDGAAAEEARWRSAPADAAPLSAWGADAAR
AAVGPDGVSVLISVKAWSSAPSQ* back to topmRNA from alignment at Contig_15:1032359..1041401- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3972 ID=mRNA_3972|Name=jgi.p|Trimin1|347744|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9043bp|location=Sequence derived from alignment at Contig_15:1032359..1041401- (Tribonema minus UTEX_B_3156 )
ATGCTTGTGCTCGTCTTCACGGGCTGCCTCAAGCGCGTGTCTCAGGTGCA
AGCCAATGTGTCATAATCCGCAGACTAGACACATCTCTTTTTCTTATGGA
GCTTGCTACCGCCCGCCTGCGTGTTCGCCCCCCCCACTGTCGCCGTGTAA
CTCAAACCGCCCGGTTGAGGTATGCACGGTCTCTCTCGTCCCTCACGGGC
TGCCTCGAGACGCGCAAGGTGCAAACTGCATCAAAGTGGTTCTATTTAGT
TGTGAAGCTTTCTACCGCCTGCCTGCTGATCCCCCCCCCCCCCCCCCCCC
TCTCACCGTGTAACGGCTGTTCCCAGGCGAGGTGTGCACGATCGCGCTCG
TCTTCACGGGCTGCCTCAAGACGCGCACGGCAAAAGCTGCATCAAGCCAT
AAGTATACAGCTTCTGTTGCTATTGAAAAAGCTCGCTACCACCCGCCTGC
TGAACCGCGCTCCCCTCTCTCATCTCTCGACGTGTAACTGCTCAAACTGC
GCAGGCGACGTGTGCACCATAGCGCGCTCCTCTTCACGGGGTGCCTCAAG
ACGCGCAAGGCGAAAAGGACATCAAGCCATAAAAATACATCTGCTTTTTC
TGCTGTGAAGCTCGCTACAACTCGCCTGCTGACCCCCCTCACCCGCCCCC
GCTTTCTCTTCTCTCGCCGTGTAACCGCTTTAACCGCCCAGGCAAGGTGC
ACGATCGCGCTCGTCTTCACGGGCTGCCTCAATACACGCACGGCGAAAGC
TGCATCAAGCCATGAGAATACAGCTTCTATTTCTATTGAAAAAGCTCGCT
ACCACCCGCCTGCTGATCCGTGCTCCCCCTCATCTCTTCGCCGTGTAACC
GCTGTAACCGCTCAGGCGAGGTGTGCACGATCGCGCTCGTCTTCACGGGC
TGCCTCAAGACGCGCAAGGCGGACCCGAAGAAGACGTGGCACCCGCTGCA
CGACTTCCTGCACACGATGCTCAACACGTTCGCCACGGGCGTGCTCGGGC
CGCTCTTTGTGGGCGAGATACCGCTCATACTCACCAACGACCTCAACTTC
ACGCTGCTCGCGATCGTTTGGATGATCTTCTACAGGCACGTCAACTGCAA
ATTTAGCGCATGTGACGCGAGATACCGCTCATACTCACCAATGACCTTGA
CTTCACGCTGCTGGGCGTCGTCTGGATGATCTTCTACAGGCGCGTCAACC
GCAACTGCGGCACATGCGACGTGCTTTGTGTCGAAGTACATATAGCTCAG
CGCTAGAACGCTGCGTAATCTTGCGAGATGAGACGTGGGCACCTCGCACA
GCAAGCGCGGCCTCGGTCAGCGGGACCTTTTGTGCCTTGAGTGAGAGCAA
GCAAAAGGTGCTTGAGCGGCGGTCATATAGGCTAGGCCTAGGTTTAGAGG
TGGCGTAGTGCCTGTACACTCCAGTGTCAAGTCAGGGTTGGGGCTAGGGT
TTAGGACAGCGCCGCATGCTCTACGCCAACACAGGCATCGCTGCGCAATG
TCCTGACCGTCACGCGCCGCCGCTTTGCGAGACAAGACGTGGGCGCCTCG
TAGCAATCGCGGCCTCGGTCAGGGGGGCTTGTTTGCGCCTTTTATTTTAA
GAAGCGAGAGCAAGTAATTTGTGCTTGAGCGGCGGTCATATAGGGTTAGG
GCTAGGGTTGGGGATGGCGTAGTGCCTGTACGCCCTCCAGTGTCAAGTCA
GGGTTGGGCTGGGGCTTGGGTCAGCGCCGCATGCACTATGCCAACACGGG
CATAGCTGCGTAGAGGACTGCCCGTCACGATGCATCGGCCGGCGCGTACT
CGGATGATGCGCCAGCACCGCCTTGCCGGCGGCGCAGCAACTGCAGGCTG
CAAGGGCGCACGGTGTTGACAGCCGCCGTGGCTTTCCCGTGTGCCCCGGC
ACGGAGTCGCATCTTGACAACTTCAACGTTGTGTTGAAGCACAGCCATTG
AAGCACAGCCATGCCCTGTGCATGGCTGGTGTGCTGCTGCGCTGCACACG
GTTGCGCGCTGCTGCTGCAAAGTCTTGCGCACTCTTTTTTCCCTGCTGAA
TGGCAACAGCGCGACGCTGCAGGTGACTGTTCCGGCTTTACTGCGCATGC
TTTGCTCAGTCTACGGAAGAGCCCCGGCTTTCATGGCAGTCACTTTGTTG
AACTCGCTGTTGAAGTTCCGGCACGGCGCTGCACTCGCCGGCTGCAGTGC
TCAACCCCTGGCTGACTGAGTGGCGCTGCGGGTCGCGTGTGTGCAGGTTT
GACAAGACCATGGTGAAGTTTGCCAGCCGCCTCGGGGTGTACCAGGTTCT
GGTCTTCTTCTCCACGCTATCGCGCGCCAACAACGTGTGCGTATTTACCG
ACAAGGCCTACAAGGTATGCCTGTGTACGCTCCCAGGCGCGGTGTTCCCC
GCGCGCTCGCAGCACGAGTGTGATGTACGTACAGTAGCTGAGAGTGTTTG
CCCTGATTCGCGCATGCATGTGGATCGCGGTATCGGAACCCGGGTCATGT
GTGATGATGCTCAACTCATGCAGCGTGACGCTATCAGTCACATACCAAAC
CCGCATACATCACGATGAGTATTCGCAACCCGGCTTGTGCGCGATATGGC
AGCATATTTTAACGACCGTCCTGCCTGATAACTTTTATGAAGTTTTGGGG
TTGGGATTAGGTTAGGGATCGGGTTAGGGCAAGGGCGAGGGTTGCGATGT
TTTGGGAAAATAGAAGGCATGTGGGTTGGTCGCGCGAGACTGAGTGTTCT
GCACTAGATGTTACGCCCCCCCCCGTTGACCCTGCCCTTCAGCGCCTTCC
CCCCCGGCGCGTGCTCAAGCATCGGCATCTGCAATCGCACGCTGCTTCTC
AGCTTGTCTTGATCGTTGGTGGCAGTGCATGCTAGCTACCAGTCTTGCCC
CCCTTTGCCCCCCCCCCCCCCACGCACACACACCGCAACGGCATCTACTC
ACACCATGCTGCTGCTCGGTGCAGCTGCATCCAGGCGCAGCACTTGCATA
TGCATAGACTCATGAGTCTCACCGGTCCCCTCCTTTCCCCACAGCACGCC
CTCTCCTCCCCCCCCCCCCCCCCCCCCCCGGGGCATCTCCTACCCCGCCA
GCCATGCTTTCCCGCGACATATGACACTGTGCCTCTAGGCAGTCGCTAAG
CAGCCCCCCCCCCCCCCGCCCCCCTTTGCCCCCCCCCCCCCCCCCCCTTC
CTCCCCCTGCAGCGCCTCCTCAACCACCCCGGCGCCGGCGTCTACTACCC
CATCCCCCTGCTCGGGCCCATCATTGTCGGCACGATCCGCGGCGCCGGCG
GCAACGTCTTCCCTCCCGACAAGGGCCTCGGCGCACTCGCGTCGGCGTTC
CCCTTCAACGCGCAAATCGCGCTCATCTGTAGCGCGGTGTGGCACCTGGC
GGTGAACGACACGCACATCGCGGGGGGGCGCGTGCGCGCGGCGCTGGCGC
GCGCGGCGGGCGGCGGCGGCGCCGTCACGCCGACGGCGCTGCGCTGCGCG
ATCGTCGCGCTGTTCCTGGTGATGAACGTCATCCAGGTAACGGCGCGCCG
CTGCTGCTGTGCTCTCTGAAGCAGTTTCTGTAACGTCAAAGTTGCTCATG
AGAAGGCTCTGGCGGCAGTATTTGGCTAGGGGCGGTGGCGGCGCCGTCAC
ACGGACGGCGCTGCGCTGCGCGATCGTCGCGCTGTTCCTGGTGATGAATG
TCATCCAGGTGGAGGCGGCGTGCTGCCATTTTCCTAGCATCAACAACGTT
GATGGCGAGTAGGCTCTGGCAATCGTCTGTAGCTAGGAGTTGCAGTGCTA
CATGTGTGCATGCACAACCAGGGCACGGCCAACGCATGCTTCCTTGCAAT
GAACGACCTACGAAGGGGGCGCGCTCTACGCCGCTGTCTATATCTGTAAG
GGTCAGTCCGCGGAAGCTTAAAGCTGAGCACTGTAGGAAGGAGAGTTAGG
GTTGAGATTAGGGTTAGGTATGAGCAATGATGCGGCGGCGCCGCGCCCGC
CTGTCCGCAGTTCCACCGCTCGACGCGCGCGTGCGCGCGCTCAGCGCTGC
ATGCGCGCTCTGCAGTGTCCCTGCTGACTTCCCCACGTTCGCGCCTGCTC
CATTCCCTTGATCTACGTACATACCCACAGCCATGCGCGCCGCACCGCGC
TGTGCATGTATTTGTGCACGATGCATCTATGACACGTTGCAGACTGCATG
TGGACAGGGGGTCTGCAAGCGCTGATGCTGATCGCTGCTGCCCCCCCTCC
CCCCCCCCCCCCCGCACCCCCCGCCATCCCCACAGTCCTTCCCGAGGTTC
TCGACCTTCAACCCATTCACGCCAATCTGGGAGGTGAGTACCCCACCCCA
GTGCTCAGCAGCGTACAGCAGCATGCCGCTCACACAGCGCAACAAGACGC
TGTTCATAATGAGATGTCTCGCGGTTGCATGATGCCACTGCTGCTGTGCC
ATGAGCAGGTCACGCGCGCCGCCGCCATGCGGCATATGTACGTACGGTAT
GCATCGCACGCGGGCAGTCGTCGTGTGCGCAGAGGCGCGGCTTCGTGCGC
GCCGTGCGCGTGCACGCTGCTGTCAGCGCCATGCTGACTGGTGACTGCAC
ATTTGCATGTACATGTGCTTGATGTATGTGTGTTTGATCACAAACAGGTG
CATGTGGTTTGTTTGATTGCGTACGCCAGCACATGCGCGCGCGCGCGTGT
GCGTGTGTGTGTGTGTGCGTGCTGAGCACTGATGACTGGTCCGCCGCGCC
GTGTGCACGTGCGGAGCAGCACGATGCAGCACGCAGTAACGAGCGCGTTT
GCATCCCTGGCGTTGCGGCGGTGGCGACTCACTGGCCACGGACTTTCCAC
ATGTTGGCTGTCAGGTAGCAAGTATGCATTCTTCGACCGTGCGCACTCGC
ACACTTCTAGAGGCATCCACTTATATTCATGGCTCAGACATGTCACGCTC
ATCGACCGTGCACGCGACGGGATCGAGCCGCAGGCGCGTACTGCACAAAG
GCATGCATACGCGGCCACGCACAGCGCAACAGCGCTCAGCACACCGCATC
GCCCCCGCCGCACCGCGAGCGCCGCTGCGCCGGGGGCACGGCGGCGCAGC
GTTGAAAGTCGCTGCGATGCCCTGCCGATACGGCAGAGTGCGATGTGGAG
TGGCCAGTGAGGGGGTGCCGTCGTCTGTACGTAGAGTGGCCAGTGAGGGG
GCGCCGTCGTCTGACGCCACGCGCGTCGTGGTCTCTCTCTCGCATGCGCC
TTGATGTGCAGGTGGTGTACCTCGTGTCGGGGATACCGCGCGCGCCGATC
AAGCCCGGCAAGGGCAAGGCCAAGAGCAAGACCAGCAAACTGGTGAGCGG
CGCGCTTTGACGTTGAAAGGACAGTGCAGCGATTGATGTTTGTCGGCACC
TCAGAGTTTACAACCAGGGCTGTGGAAACGAGTAGTCGAAACCGTGGACG
CCAGTGTTTACAGCTTCGTGCAGTGGCGAGTGACGCTGTTTGAGATGTGG
TGACGCAGAGAGGCACGGGCATAGCAAGATCTGCCCCGGCGACCTCTGCC
GTGTGAGCTGGCAGGGGTGGCGACAAAGATCAACATAGTGCGGCGTGCGC
CACGCTGTCGCCACCTCCGGCTCCTGTTGTGTCCAGCGAAGGCTAAGTCA
TTGTGATGTCTGTGCCCCCGTGCTCGTCGGTTGCTGCCCTGTGCGTTCAT
GCGCACCCAGGTTCGGTCGCTTTTGCGGTGACACTACGGTTGATACCCGC
CGCTCACTCCATGTGCATGTTTTTGTGCTTATGGCTGCGCCCTGGGACAC
CTGCCGAACTTGTATGCTGGGCGGGCAGGCGTTCGCCCGCATGAATACTG
CACAACTCCCCCCTCGTCGGAGGCGACGGCAACAGGAGCTCACGCGTTGA
TCGAGTAGCGCCCCAGGGCTGCGTGACCTCCCACGTCCCTCGCAGCCCTC
TTAGGGCTAGGGTTAGGGCAAGTGTCAGGGGTAGGGGTAGGTTTTAGGTA
TAGGGGTAGGGCAAGCGTCAGGGGTGAGGACAAGTGTCAGGTGTAGGGTT
AGGCTTTGGGGCTAGGGTTAGGGCAAGGGTCAGGGGTAGGGTATAGTTAG
GTTCCATTGCATTCATATCACCAGTGAATCCTCGCCTCAGCACTCACGCA
AATACGGCGCTATTGCCCCCTGCGCGCTGCAGGTCAAGTCGCTGCTGAGC
GCGGCGCGGGGGCTGGGCGTCATGGGCCTGGCCGCCTTTGCCGTGTGGTC
CTACGTGCCGCGGAGCACGCTGAGGTCGGGGGAGGTACGTATCGAGTCGT
GTCATACCTACCCACTGCCGTCGCGCTTTCGTGATGTAAATGCTGCTGCC
GCTTGGTCCTACGTGCTGCGGAGCACGCTGAAGTCAGGGGAGGTATGTAC
CATTACTTCGGAAGTATGCATAATGCCTACCTACTGCCGCCGCGCTTTCG
TGATGTGTATGCTGCTGCCGTTTGGTCCTACGTGCCGCGGAGCACGCTGA
GGTCAGGGGAGGTACGTGAGAATATGCATGTTTAGCATTTTCACCCGCCT
GCTGCCGCCGCGCTTTTGCGATGTATATGCCACTGCCGTGTGGTCCTACG
TGCCCCGGAGCACGCTGAGGTCGGGGGAGGTACGTATTCATATGCATTAT
ACTCACCTTCTGCTGCCGCGCTTTCGAGATGTGTGTGCTGCTGCCGTGTG
GTCCTGCGTGCATGCCCTGGAGCACGCTGAGGTCAGGAAGGTATGTATTA
ATATGCATTGTACCTACCCACTGCCGCTGCGCAAGAGAGACGCGTGCCCG
TTGAGCCGACTTGATGGGCGCGCAGTTTTTTTTATCGACCGTTGCACACG
GCGTTCCGCTGCGCACAGCGCCTTGCATGGCAGTCACCCAATCACCCAGC
GATGTGTGCCTGCGCGCCGCCAGCCTCCTTGACTCGGACTGAGAGCCTGC
CTGACTCCTCTCTGACTCCGAGTCCGCTCCGCTCCGACGCAGACTGGAAA
TTTGACTTCACCCTCACCCGTACTGCATCCCTACAGCGACAGCGTGTTCC
GAGTTCGGCTGTGCAAACTTCGCCCTACTGTACACGCATCCCACACCGCA
GCCATTGACCATCGCGCTCTCCCCCCGCTCGCGCGGCGCCGCCGCCGTGA
CTGCAGTTTCTCAAGCAGGGGGAGTTCCTGGGGTGGTGCACGCTGCTGCC
GGAGCTCAGGGGGTGCCAGCCGACCATCGCGGTCGTGGAGGCGACGGGGC
GGCTCGCGGTGTACAGGGGCAAGGTGAAGTTGAAGTTGCAAGTTGAGGTT
TTCCTAAGGTTGTGACTAGTCTGTCACAGAGTTTGAAATTCTCACTGGAG
GTGGGCGTGTATCGAACTGTCACAGCAGATGTTGAAGCTATCACTTCAGG
TTGACTCTCAATGATTGAAGTTCTCACTTGAGGTTGGCGTAGTGCGCGCG
CATGTTTTGTGGCGCGTGTGATAGTTGAGGTAGCACTCACGCGAGGGCAT
GCGCTTGCAACATATGTGTGATGCTGGACGCCTGCATGTTCTGACGCCTT
TGTGTTGTCGTTGCTGGCACGACATCATGTGCTGTTTCACGACTGCATAC
TTGCTTGAAAATAACAGTTTGAAACACTGTTTTTCGAAGTAAAGTACATG
TATCACGAAATGCTGCGCTGATGTTCCTCTGCTCTGTCTGCTGGCCCTCC
TGCTGCACGCGTGCACTCGCAACAACGCAGAGCCCCGGCGCCAAGTCCAA
CACGCTGCTGTGGTCAAGGTCAGTGACAGCGCGCCATATGCATATGCTCC
AGTGCATTGCCCTCACAGCTTGTGTTGTTCTTGTGTCTGTTATTCACGTC
AGTTCAAGGACTTGTGCAGTGCTTTGTGTGCGCGCGCATCTCTCGCTTCA
CGACGAAGAAGTTCGTACTGCAGTCATCTCAGCATTGGCACATGCAGAAG
TTTGAGTAGTTCCCCTCAGTCATGCAGCTGGGTTCCGGCGCGTTTCTGAG
CTTGACGGCAAGGCCTGCAGACCCTGTTACGGTGTCACCGCAACGCCGCG
TTGTTTATTGCCGAATCAACATGCGTGTGACGATTGGCTGCGCATTGCAC
GGAGCAGTCACCGCCTGCTCAGAACTACTGTACTCACAGTGTGCTCAACT
GACACCCCCCCTGCGAAGAACTCCCTGTTACTCAGCCCCCCGCAGTGTCT
GCGGTGCTTCAGAGGAGCTGCAACACCCCTCTCAACGCCGCGTGCATGCT
ATTGACTGTAACAGCGCCCGCATCACCTGCGCATCCAGCTTTCAATCCTT
CACACGACACACGAAGCGATATCTTGTTTGACACTCGTTGATCAGTGTTT
TGTTGAACAGAAGACGTTAAGGAGTGTTTCGTTGATCAGAAGACAACAAC
TTCTCGAAAACTCGGCATCATGTCACCCCCCCCCCCCCCCCCCCACTCAC
CCCCTCCCCTCCCCCCCCCCTCCTCAACACAGCGCGGCCGCCGACGAGCC
GCCCGCGGCAGCAACCAGCAAAGACGGCTGGGTCGCCGCGCTCGCCGCCG
ACGGCACTCTCACACTCAAAGACGGCGCCGCCGCGGAGGAAGCGCGCTGG
CGCTCCGCGCCGGCTGACGCAGCGCCGCTCAGCGCGTGGGGCGCAGACGC
CGCGCGCGCCGCCGTGGGCCCCGACGGCGTGAGCGTCCTCATCTCGGTGA
AGGCGTGGTCGTCGGCGCCGTCGCAGTGAGCGCTGCTGCTTCCGCCGCCG
CCGCCGCCGCTGCTGCTGCTGCCGCCGCCGCCGCCGCCGCTGCGCATGGG
TAGGCGGCGGCAGCAATGACAGCGGCGTCACGTGCATGCTGTAAATGCGC
TGCAGCGCCGCGGTCGCTTATAGGCGCGAGTGTACGCGCCAAGCACTGGT
CGCAGTGGTGATGAGCAGCGACGGCAGTTACAGCTGCGCGCAGCAGCGTC
TGGGCGCTGCCGTCGCTCGGCGCAGCCCTCGCGTCATCGTCCCGGCAGCG
CGCAGTTCTGCGGGCGCCGTGGTCGCGGTGGCAGGAATTAAAC back to topCoding sequence (CDS) from alignment at Contig_15:1032359..1041401- >mRNA_3972 ID=mRNA_3972|Name=jgi.p|Trimin1|347744|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1572bp|location=Sequence derived from alignment at Contig_15:1032359..1041401- (Tribonema minus UTEX_B_3156 )
ATGCTTGTGCTCGTCTTCACGGGCTGCCTCAAGCGCGTGTCTCAGGTGTG
CACGATCGCGCTCGTCTTCACGGGCTGCCTCAAGACGCGCAAGGCGGACC
CGAAGAAGACGTGGCACCCGCTGCACGACTTCCTGCACACGATGCTCAAC
ACGTTCGCCACGGGCGTGCTCGGGCCGCTCTTTGTGGGCGAGATACCGCT
CATACTCACCAACGACCTCAACTTCACGCTGCTCGCGATCATACCGCTCA
TACTCACCAATGACCTTGACTTCACGCTGCTGGGCGTCGTCTGGATGATC
TTCTACAGGCGCGTCAACCGCAACTGCGGCACATGCGACCAACTGCAGGC
TGCAAGGGCGCACGGTGTTGACAGCCGCCGTGGCTTTCCCGTGTGCCCCG
GCACGGAGTTTGACAAGACCATGGTGAAGTTTGCCAGCCGCCTCGGGGTG
TACCAGGTTCTGGTCTTCTTCTCCACGCTATCGCGCGCCAACAACGTGTG
CGTATTTACCGACAAGGCCTACAAGCGCCTCCTCAACCACCCCGGCGCCG
GCGTCTACTACCCCATCCCCCTGCTCGGGCCCATCATTGTCGGCACGATC
CGCGGCGCCGGCGGCAACGTCTTCCCTCCCGACAAGGGCCTCGGCGCACT
CGCGTCGGCGTTCCCCTTCAACGCGCAAATCGCGCTCATCTGTAGCGCGG
TGTGGCACCTGGCGGTGAACGACACGCACATCGCGGGGGGGCGCGTGCGC
GCGGCGCTGGCGCGCGCGGCGGGCGGCGGCGGCGCCGTCACGCCGACGGC
GCTGCGCTGCGCGATCGTCGCGCTGTTCCTGGTGATGAACGTCATCCAGT
ATTTGGCTAGGGGCGGTGGCGGCGCCGTCACACGGACGGCGCTGCGCTGC
GCGATCGTCGCGCTGTTCCTGGTGATGAATGTCATCCAGTCCTTCCCGAG
GTTCTCGACCTTCAACCCATTCACGCCAATCTGGGAGGTGGTGTACCTCG
TGTCGGGGATACCGCGCGCGCCGATCAAGCCCGGCAAGGGCAAGGCCAAG
AGCAAGACCAGCAAACTGGTCAAGTCGCTGCTGAGCGCGGCGCGGGGGCT
GGGCGTCATGGGCCTGGCCGCCTTTGCCGTGTGGTCCTACGTGCCGCGGA
GCACGCTGAGGTCGGGGGAGTTTCTCAAGCAGGGGGAGTTCCTGGGGTGG
TGCACGCTGCTGCCGGAGCTCAGGGGGTGCCAGCCGACCATCGCGGTCGT
GGAGGCGACGGGGCGGCTCGCGGTGTACAGGGGCAAGAGCCCCGGCGCCA
AGTCCAACACGCTGCTGTGGTCAAGCGCGGCCGCCGACGAGCCGCCCGCG
GCAGCAACCAGCAAAGACGGCTGGGTCGCCGCGCTCGCCGCCGACGGCAC
TCTCACACTCAAAGACGGCGCCGCCGCGGAGGAAGCGCGCTGGCGCTCCG
CGCCGGCTGACGCAGCGCCGCTCAGCGCGTGGGGCGCAGACGCCGCGCGC
GCCGCCGTGGGCCCCGACGGCGTGAGCGTCCTCATCTCGGTGAAGGCGTG
GTCGTCGGCGCCGTCGCAGTGA back to top
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